View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_high_26 (Length: 252)
Name: NF10103_high_26
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 26031290 - 26031072
Alignment:
| Q |
27 |
atagatgtagcaacaacatcagaagcagtgaaaaaattgaaagtttacattgttttttactcaatgtatggtcatgtggaatcattagcaagatcattga |
126 |
Q |
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| T |
26031290 |
atagatgtagcaacaacatcagaagcagtgaaaaagctgaaagtttacattgttttttactcaatgtatggtcatgtggaatcattagcaagatcattga |
26031191 |
T |
|
| Q |
127 |
aaaaaggggttgattctgttgatggtgttgaagggtttttgtaccgtgtcgtagagacactgccaaaggaagtgttggaactaatgaaagcacctgagaa |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26031190 |
aaaaaggggttgattctgttgatggtgttgaagggtttttgtaccgtgtcgtagagacactgccaaaggaagtgttggaactaatgaaagcacctgagaa |
26031091 |
T |
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| Q |
227 |
agatgatgagattcctttg |
245 |
Q |
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|||||||||| |||||||| |
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| T |
26031090 |
agatgatgaggttcctttg |
26031072 |
T |
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