View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_low_22 (Length: 396)
Name: NF10103_low_22
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 94 - 361
Target Start/End: Original strand, 47330680 - 47330946
Alignment:
| Q |
94 |
gccactaatttcgattaccttaacaaatgatttaattagttccaaaagtttaaaaatctattcaccatttatctgtttaccacaagttttttcaacaatt |
193 |
Q |
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| T |
47330680 |
gccactaatttcgattaccttaacaaatggtttaattagttccaaaagtttaaaaatctattcaccatttatctgtttaccacaagtttct-caacaatt |
47330778 |
T |
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| Q |
194 |
agtttcattcaaaaaacaatggttcaattagtttattttttgatgggtagttcaattagttttatatattacaaacgtctttttcaactatgatgacatn |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47330779 |
agtttcattcaaaaaacaatggttcaattagtttattttttgatgggtagttcaattagttttatatattacaaacgtctttttcaactatgatgacata |
47330878 |
T |
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| Q |
294 |
nnnnnnttcgttcatgagcatagctcagtcggcaaggatattacattgttatatgtaaggacaaagtt |
361 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47330879 |
aaaaaattcgtccatgagcatagctcagtcggcaaggatattacattgttatatgtaaggacaaagtt |
47330946 |
T |
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