View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_low_26 (Length: 358)
Name: NF10103_low_26
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 19 - 348
Target Start/End: Original strand, 31534530 - 31534859
Alignment:
| Q |
19 |
ttaattttattgatagtttctatattctcgctaacaaattcagcttagctgttaggaaaagagggtaa-tattattccttcaagaactagactttgtttg |
117 |
Q |
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| T |
31534530 |
ttaattttattgatagtttctatattctcgctaacaaattcagcttagctgttaggaaaagagggtaaatattattccttcaagaactagactttgtttg |
31534629 |
T |
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| Q |
118 |
atgtgcacaactaaaattagttttgtaccaagcacacgtctatccttcatatttgaatcaataagtctcatcattttttatttattttaacgcagtattc |
217 |
Q |
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||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |
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| T |
31534630 |
atgtgcacaactaaa-ttagttttgtaccaagcatacgtctatccttcatatttgaatcaataagtttcatcattttttatttattttaacgcaatatac |
31534728 |
T |
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| Q |
218 |
tttcaactcattatcatctaatgactagaatgtcctataaaactctttcgactcattatcattcttttgtgagtcatataaaattatgatttgtttctct |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
31534729 |
tttcaactcattatcatctaatgactagaatgtcctataaaactctttcgactcattatcattcttttgtgaatcatataaaattatgatttgtttctct |
31534828 |
T |
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| Q |
318 |
aataggttccatttaactagaatatcctttg |
348 |
Q |
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|||||| |||||||||||||||||||||||| |
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| T |
31534829 |
aataggctccatttaactagaatatcctttg |
31534859 |
T |
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