View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_low_29 (Length: 344)
Name: NF10103_low_29
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 44706259 - 44705930
Alignment:
| Q |
1 |
atttacagtgaaaggaaagatgtagttgatgaattgtcacatatacactctgagaaaccttcagttggaagtacttctccaaaagagcctgttaaatcaa |
100 |
Q |
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| T |
44706259 |
atttacagtgaaaggaaggatgtagttgatgaattgtcacatatacactctgagaaaccttcagttggaaatacttctccaaaagatcctgttaaatcaa |
44706160 |
T |
|
| Q |
101 |
gtgatgatagtaggtttgggattatatgagacttgagttcattctcaaatctcaatccttaacattatgagtacagttgcattgatttagttttgcttag |
200 |
Q |
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| T |
44706159 |
gtgatgatagtaggtttgggattatatgagacttgagttcattctcaaatctcaatccttaacattatgagtacagttgcattgatttagttttgcttag |
44706060 |
T |
|
| Q |
201 |
taatatagtcagtcttcattcaaatctcaattttttgtgtgaggacgattcttgtttattgttatagtgatgtaatgtaaaagttgtctaacagttatga |
300 |
Q |
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| T |
44706059 |
ttatatagtcagtcttcattcaaatctcaattttttgtgtgaggacgattcttgtttattgttatagtgatgtaatgtaaaagttgtctaacagttatga |
44705960 |
T |
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| Q |
301 |
aacatggatgaacatttatgaagatgtatt |
330 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
44705959 |
aacatggatgaacatttatgaagatgtatt |
44705930 |
T |
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