View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10103_low_42 (Length: 308)

Name: NF10103_low_42
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10103_low_42
NF10103_low_42
[»] scaffold0159 (2 HSPs)
scaffold0159 (5-303)||(33194-33492)
scaffold0159 (178-262)||(31576-31660)
[»] chr2 (26 HSPs)
chr2 (5-303)||(5788821-5789119)
chr2 (5-303)||(3395400-3395698)
chr2 (168-303)||(36720068-36720205)
chr2 (155-255)||(29651760-29651860)
chr2 (177-275)||(29977336-29977436)
chr2 (152-298)||(34425545-34425692)
chr2 (165-248)||(36729280-36729363)
chr2 (165-259)||(19040696-19040789)
chr2 (215-294)||(41754117-41754198)
chr2 (186-298)||(24967965-24968078)
chr2 (165-259)||(39839082-39839175)
chr2 (5-93)||(41754533-41754620)
chr2 (172-281)||(38796791-38796902)
chr2 (179-262)||(36727624-36727707)
chr2 (178-256)||(20106660-20106738)
chr2 (155-204)||(40599682-40599731)
chr2 (155-255)||(45659829-45659927)
chr2 (190-258)||(19994423-19994490)
chr2 (180-281)||(41753978-41754081)
chr2 (7-305)||(6465994-6466287)
chr2 (224-262)||(31967092-31967130)
chr2 (231-281)||(12454015-12454067)
chr2 (209-262)||(14903541-14903594)
chr2 (178-262)||(5787203-5787287)
chr2 (178-307)||(31963646-31963777)
chr2 (178-262)||(39403820-39403904)
[»] chr4 (37 HSPs)
chr4 (5-303)||(13228533-13228830)
chr4 (4-257)||(49953018-49953272)
chr4 (4-261)||(39974683-39974941)
chr4 (69-307)||(281823-282059)
chr4 (118-288)||(11559461-11559631)
chr4 (149-262)||(6554517-6554630)
chr4 (154-298)||(17675240-17675385)
chr4 (134-230)||(28475656-28475752)
chr4 (150-246)||(50158172-50158268)
chr4 (5-93)||(50814634-50814721)
chr4 (155-256)||(6560964-6561065)
chr4 (134-249)||(55050004-55050117)
chr4 (167-246)||(24183432-24183510)
chr4 (178-253)||(36697769-36697844)
chr4 (173-262)||(314323-314412)
chr4 (133-249)||(26289997-26290111)
chr4 (178-259)||(35695054-35695134)
chr4 (133-305)||(42757527-42757698)
chr4 (179-262)||(42729464-42729545)
chr4 (180-248)||(56340282-56340350)
chr4 (149-305)||(42756767-42756925)
chr4 (178-256)||(316508-316586)
chr4 (178-256)||(13918248-13918326)
chr4 (155-256)||(11560199-11560299)
chr4 (212-286)||(14266234-14266310)
chr4 (155-204)||(52543045-52543094)
chr4 (152-305)||(22681165-22681319)
chr4 (231-281)||(9694408-9694459)
chr4 (221-256)||(39977246-39977281)
chr4 (174-241)||(48683181-48683248)
chr4 (224-262)||(313117-313155)
chr4 (224-262)||(6553334-6553372)
chr4 (174-235)||(4237132-4237193)
chr4 (152-256)||(13230882-13230986)
chr4 (155-235)||(13668194-13668274)
chr4 (155-235)||(13681051-13681131)
chr4 (156-204)||(13919329-13919377)
[»] chr5 (17 HSPs)
chr5 (5-305)||(38015878-38016177)
chr5 (155-256)||(9012711-9012812)
chr5 (173-262)||(9024952-9025041)
chr5 (174-305)||(33013852-33013981)
chr5 (180-298)||(27594522-27594641)
chr5 (176-262)||(20966121-20966207)
chr5 (4-127)||(33014000-33014122)
chr5 (176-262)||(19910596-19910682)
chr5 (133-249)||(8128432-8128546)
chr5 (133-293)||(29865827-29865987)
chr5 (152-249)||(4062136-4062231)
chr5 (174-298)||(19320306-19320433)
chr5 (186-298)||(10175893-10176006)
chr5 (152-249)||(7332935-7333030)
chr5 (154-220)||(11770399-11770465)
chr5 (155-204)||(33009855-33009903)
chr5 (172-204)||(2260855-2260887)
[»] chr8 (46 HSPs)
chr8 (4-294)||(42797242-42797532)
chr8 (5-294)||(23141752-23142042)
chr8 (5-294)||(13756376-13756666)
chr8 (148-303)||(10901390-10901547)
chr8 (4-261)||(21588824-21589082)
chr8 (149-303)||(30254504-30254663)
chr8 (152-262)||(45247765-45247875)
chr8 (152-284)||(23686598-23686732)
chr8 (152-262)||(40885741-40885851)
chr8 (153-262)||(23683105-23683214)
chr8 (118-288)||(38290486-38290658)
chr8 (155-307)||(13758881-13759030)
chr8 (178-256)||(17888052-17888130)
chr8 (133-249)||(16313248-16313362)
chr8 (133-249)||(34800789-34800903)
chr8 (149-262)||(41527027-41527140)
chr8 (155-262)||(367212-367319)
chr8 (178-305)||(19263304-19263432)
chr8 (209-262)||(357546-357599)
chr8 (174-280)||(16220246-16220354)
chr8 (178-258)||(26622857-26622938)
chr8 (133-249)||(37251164-37251278)
chr8 (133-248)||(16250039-16250152)
chr8 (152-204)||(40260477-40260529)
chr8 (178-256)||(8358803-8358881)
chr8 (221-262)||(13758078-13758119)
chr8 (155-256)||(15342301-15342402)
chr8 (155-256)||(15431366-15431467)
chr8 (155-256)||(15522670-15522771)
chr8 (150-206)||(8357693-8357749)
chr8 (180-281)||(42797103-42797206)
chr8 (180-247)||(17871244-17871311)
chr8 (179-242)||(18953362-18953425)
chr8 (221-256)||(21586497-21586532)
chr8 (133-204)||(23525197-23525268)
chr8 (232-288)||(45528252-45528310)
chr8 (127-245)||(14374999-14375117)
chr8 (153-187)||(14376132-14376166)
chr8 (114-204)||(35226668-35226758)
chr8 (168-221)||(758098-758151)
chr8 (153-202)||(5685867-5685916)
chr8 (232-261)||(41787087-41787116)
chr8 (226-298)||(45245034-45245107)
chr8 (225-281)||(4072889-4072945)
chr8 (180-281)||(23141613-23141716)
chr8 (224-277)||(45527334-45527389)
[»] chr1 (28 HSPs)
chr1 (5-303)||(43387047-43387344)
chr1 (124-261)||(22636310-22636447)
chr1 (154-288)||(47783134-47783270)
chr1 (165-262)||(20306724-20306820)
chr1 (165-259)||(40946518-40946611)
chr1 (165-259)||(1992421-1992514)
chr1 (152-262)||(22541885-22541995)
chr1 (165-259)||(30001736-30001829)
chr1 (152-257)||(15524702-15524807)
chr1 (133-249)||(17006492-17006606)
chr1 (183-260)||(21469816-21469893)
chr1 (133-249)||(34159485-34159599)
chr1 (151-280)||(49879097-49879228)
chr1 (152-298)||(7844572-7844719)
chr1 (183-262)||(19065744-19065823)
chr1 (183-262)||(19113634-19113713)
chr1 (183-262)||(22538395-22538474)
chr1 (134-204)||(3838181-3838251)
chr1 (176-262)||(43385111-43385197)
chr1 (134-231)||(8313411-8313508)
chr1 (178-246)||(3981637-3981705)
chr1 (173-204)||(3982729-3982760)
chr1 (224-262)||(45919473-45919511)
chr1 (224-262)||(49880577-49880615)
chr1 (167-228)||(16851963-16852024)
chr1 (214-284)||(19098995-19099067)
chr1 (159-256)||(43385727-43385824)
chr1 (194-298)||(26531519-26531623)
[»] chr6 (28 HSPs)
chr6 (29-290)||(1599546-1599808)
chr6 (10-224)||(26894748-26894961)
chr6 (102-295)||(29214239-29214433)
chr6 (180-262)||(31737206-31737288)
chr6 (124-282)||(2976645-2976805)
chr6 (183-262)||(33350293-33350372)
chr6 (165-259)||(7428479-7428572)
chr6 (174-307)||(11554334-11554469)
chr6 (183-262)||(21984182-21984261)
chr6 (152-262)||(21988808-21988918)
chr6 (133-249)||(23410088-23410202)
chr6 (174-307)||(4852809-4852944)
chr6 (154-256)||(4031518-4031618)
chr6 (178-256)||(15878847-15878925)
chr6 (165-259)||(16279074-16279167)
chr6 (179-298)||(24175021-24175141)
chr6 (133-249)||(20872442-20872556)
chr6 (155-262)||(19660319-19660426)
chr6 (223-303)||(24397965-24398047)
chr6 (173-280)||(9449581-9449690)
chr6 (259-295)||(26894975-26895011)
chr6 (165-262)||(26597589-26597684)
chr6 (165-227)||(28365724-28365786)
chr6 (225-262)||(4851983-4852020)
chr6 (225-262)||(11555259-11555296)
chr6 (155-204)||(27436867-27436916)
chr6 (180-281)||(1599848-1599951)
chr6 (152-204)||(20874179-20874231)
[»] scaffold0036 (1 HSPs)
scaffold0036 (50-305)||(50164-50421)
[»] chr3 (33 HSPs)
chr3 (151-294)||(50331915-50332060)
chr3 (4-261)||(36095949-36096207)
chr3 (5-117)||(50332062-50332173)
chr3 (152-298)||(40056502-40056649)
chr3 (165-262)||(20934988-20935084)
chr3 (176-262)||(14044290-14044376)
chr3 (165-262)||(17764120-17764216)
chr3 (165-262)||(19065440-19065536)
chr3 (153-262)||(30171174-30171283)
chr3 (165-262)||(32976462-32976558)
chr3 (4-146)||(12746101-12746241)
chr3 (178-256)||(20779566-20779644)
chr3 (165-259)||(42400377-42400470)
chr3 (133-249)||(19817404-19817518)
chr3 (212-285)||(10020152-10020227)
chr3 (177-274)||(25225304-25225403)
chr3 (183-262)||(20788453-20788532)
chr3 (174-274)||(52753015-52753117)
chr3 (180-293)||(39183069-39183183)
chr3 (152-262)||(39187291-39187401)
chr3 (152-257)||(30169901-30170006)
chr3 (166-244)||(431968-432046)
chr3 (178-273)||(32970436-32970533)
chr3 (173-280)||(34849788-34849897)
chr3 (173-254)||(2250975-2251056)
chr3 (173-254)||(14045389-14045470)
chr3 (155-281)||(9611703-9611832)
chr3 (178-262)||(50241485-50241569)
chr3 (168-262)||(6087838-6087930)
chr3 (221-256)||(12744020-12744055)
chr3 (225-303)||(37835402-37835479)
chr3 (231-305)||(50413-50489)
chr3 (155-196)||(44904856-44904897)
[»] scaffold0380 (2 HSPs)
scaffold0380 (184-307)||(14522-14647)
scaffold0380 (12-143)||(14373-14503)
[»] scaffold0024 (2 HSPs)
scaffold0024 (135-298)||(47112-47277)
scaffold0024 (189-252)||(41449-41512)
[»] chr7 (20 HSPs)
chr7 (134-297)||(38788897-38789060)
chr7 (154-275)||(2452101-2452221)
chr7 (165-262)||(43989681-43989777)
chr7 (97-235)||(17510236-17510374)
chr7 (97-235)||(17542840-17542978)
chr7 (133-298)||(29912549-29912714)
chr7 (159-251)||(4120006-4120098)
chr7 (178-295)||(6677088-6677207)
chr7 (154-206)||(45406685-45406737)
chr7 (97-235)||(17474752-17474890)
chr7 (97-235)||(17578324-17578462)
chr7 (167-255)||(42078960-42079050)
chr7 (219-279)||(2927976-2928038)
chr7 (178-255)||(4110362-4110437)
chr7 (182-248)||(24708451-24708517)
chr7 (221-259)||(26374611-26374649)
chr7 (153-202)||(15464394-15464443)
chr7 (211-256)||(45610345-45610390)
chr7 (154-202)||(5785971-5786019)
chr7 (154-297)||(20181326-20181468)
[»] scaffold0216 (1 HSPs)
scaffold0216 (155-255)||(29168-29268)
[»] scaffold0051 (1 HSPs)
scaffold0051 (173-287)||(12571-12687)
[»] scaffold1345 (1 HSPs)
scaffold1345 (165-261)||(1847-1942)
[»] scaffold0074 (1 HSPs)
scaffold0074 (146-303)||(30812-30970)
[»] scaffold0284 (4 HSPs)
scaffold0284 (174-256)||(6424-6506)
scaffold0284 (173-262)||(826-915)
scaffold0284 (178-307)||(7537-7668)
scaffold0284 (224-262)||(2091-2129)
[»] scaffold1750 (1 HSPs)
scaffold1750 (165-258)||(279-371)
[»] scaffold0191 (1 HSPs)
scaffold0191 (149-246)||(5137-5233)
[»] scaffold0169 (1 HSPs)
scaffold0169 (117-261)||(2229-2376)
[»] scaffold0114 (3 HSPs)
scaffold0114 (149-262)||(37016-37129)
scaffold0114 (224-262)||(35454-35492)
scaffold0114 (181-262)||(1376-1457)
[»] scaffold0012 (1 HSPs)
scaffold0012 (133-249)||(31023-31137)
[»] scaffold1743 (1 HSPs)
scaffold1743 (178-305)||(188-316)
[»] scaffold0377 (1 HSPs)
scaffold0377 (157-255)||(12554-12654)
[»] scaffold0211 (2 HSPs)
scaffold0211 (173-262)||(18450-18539)
scaffold0211 (224-262)||(19707-19745)
[»] scaffold0268 (1 HSPs)
scaffold0268 (133-249)||(19862-19976)
[»] scaffold0061 (1 HSPs)
scaffold0061 (237-288)||(45618-45671)
[»] scaffold0017 (1 HSPs)
scaffold0017 (237-288)||(153116-153169)
[»] scaffold0021 (1 HSPs)
scaffold0021 (156-253)||(128292-128389)
[»] scaffold0003 (1 HSPs)
scaffold0003 (155-204)||(50446-50495)
[»] scaffold1819 (1 HSPs)
scaffold1819 (231-275)||(179-223)
[»] scaffold1737 (1 HSPs)
scaffold1737 (152-204)||(510-562)
[»] scaffold1104 (1 HSPs)
scaffold1104 (231-275)||(1701-1745)
[»] scaffold0155 (1 HSPs)
scaffold0155 (11-70)||(22749-22806)


Alignment Details
Target: scaffold0159 (Bit Score: 271; Significance: 1e-151; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 5 - 303
Target Start/End: Complemental strand, 33492 - 33194
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33492 acatcattctcacttgtgtgattgctctttctgcaatgtgtcatcattcacacaagtgttggctccccataagtctcaatgttgatatcatacccgcttc 33393  T
Q  105 aacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33392 aacatttttgggaagcggaagtggttcgtggtggtggatcgcagacacagagagtctcatacttaatgaagagatgttaatgtgtcaaatgtgagttaaa 33293  T
Q  205 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatatctaatgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33292 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatatctaatgtcttaagattttgggtgaagttgtgatgtcaatct 33194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 31660 - 31576
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| ||||| || ||||||||| ||  ||| |  ||| |||||||||||||||| ||||||||  ||||||||| |||||    
T  31660 atgttaatatgtcatgtatgagttaaagtactacaattgatggaatagtagatgttgaataacatatacatgagatgacccatat 31576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 5 - 303
Target Start/End: Complemental strand, 5789119 - 5788821
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5789119 acatcattctcacttgtgtgattgctctttctgcaatgtgtcatcattcacacaagtgttggctccccataagtctcaatgttgatatcatacccgcttc 5789020  T
Q  105 aacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5789019 aacatttttgggaagcggaagtggttcgtggtggtggatcgcagacacagagagtctcatacttaatgaagagatgttaatgtgtcaaatgtgagttaaa 5788920  T
Q  205 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatatctaatgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5788919 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatatctaatgtcttaagattttgggtgaagttgtgatgtcaatct 5788821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 303
Target Start/End: Complemental strand, 3395698 - 3395400
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||||||| |||||||||||||| |||||||||||| ||||||  |||||||||||||||| ||||||||||||  ||||| ||||||| || |||||||    
T  3395698 acatcattttcacttgtgtgattgctctttctgcaacgtgtcg--attcacacaagtgttgtctccccataagttccaatggtgatatcatatccgcttc 3395601  T
Q  105 aacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||| |||   |||||||  ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  3395600 aacatttttggggagcataagtggtttttggtggtggatcgcagacacaaagagtctcatacttaatggagagatgttaatgtgtcaggtgtgagttaaa 3395501  T
Q  205 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtccatc 302  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||    
T  3395500 ataacactttgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttaagattttgggtgaagttgtgatgtcaatc 3395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 168 - 303
Target Start/End: Original strand, 36720068 - 36720205
Alignment:
Q  168 taatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--cta 265  Q
    |||||||||||||||||||||||||||||||||||||||   ||| ||  ||||||| || ||||||| |||||||||||||||||||  |||||  |||    
T  36720068 taatgaagagatgttaatgtgtcaagtgtgagttaaaattctacaatgtgtgcaataatatatgttgagcaacatataagtgagatgatccatataccta 36720167  T
Q  266 atgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    |||||| |||| ||||||||||| ||||||||| ||||    
T  36720168 atgtctgaagactttgggtgaagatgtgatgtcaatct 36720205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 29651760 - 29651860
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||| |||||||| | |||| |||||||||||||||| ||||||||||| |  |||||||||||||| ||||||||||||||||||| ||||||| |||    
T  29651760 agagtttcatacttgaggaagtgatgttaatgtgtcaaatgtgagttaaagtttcacattgaatgcaagagtagatgttgaacaacatctaagtgatatg 29651859  T
Q  255 a 255  Q
    |    
T  29651860 a 29651860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 29977436 - 29977336
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaa 274  Q
    |||||||||||||||||||| ||||||| |  |||||||||||||| ||| ||||||||  ||||||||||||| |||||||||||  ||||||||||||    
T  29977436 gatgttaatgtgtcaagtgtaagttaaagttccacattgaatgcaagagtggatgttgataaacatataagtgatatgactcatatacctaatgtcttaa 29977337  T
Q  275 g 275  Q
    |    
T  29977336 g 29977336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 34425692 - 34425545
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||| ||||| ||||||||||||| ||||| |  ||||||| |||||||| |||||||||||||||||||||||||     
T  34425692 cagagagtctcatacttgagagaaagaggttaacgtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgat 34425593  T
Q  252 atgactcatat-ctaatgtcttaagattttgggtgaagttgtgatgtc 298  Q
    || ||||||||  ||||| ||| || ||| |||||||| |||| ||||    
T  34425592 ataactcatatattaatgacttgaggtttagggtgaagatgtggtgtc 34425545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 36729363 - 36729280
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagt 248  Q
    |||| ||| ||| |||||||| |||||||||||||| |||||  ||||||| |||||| |||||||||||||||||||||||||    
T  36729363 actttatggagatatgttaatttgtcaagtgtgagtaaaaatttcacattgtatgcaagagtagatgttgaacaacatataagt 36729280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 19040696 - 19040789
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||  ||||| ||||||||||||||||    
T  19040696 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 19040789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 41754198 - 41754117
Alignment:
Q  215 gaatgcaatagtagatgttgaacaacatataagtgagatgactcat--atctaatgtcttaagattttgggtgaagttgtga 294  Q
    |||||||||||||||||||||  ||||||||  ||| |||||||||  ||||||||| ||||||||||||||||||||||||    
T  41754198 gaatgcaatagtagatgttgagaaacatatatatgatatgactcatgtatctaatgtattaagattttgggtgaagttgtga 41754117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 298
Target Start/End: Original strand, 24967965 - 24968078
Alignment:
Q  186 gtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat-ctaatgtcttaagattttgggt 284  Q
    ||||||||||||| ||||| |  ||||||| |||||||| ||||||||||||||||||||||||| || || |||||  ||||| |||||| ||| ||||    
T  24967965 gtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgatataacccatatattaatgacttaaggtttagggt 24968064  T
Q  285 gaagttgtgatgtc 298  Q
    |||| |||| ||||    
T  24968065 gaagatgtggtgtc 24968078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 39839175 - 39839082
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||| | |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||  ||||| ||||||||||||||||    
T  39839175 acttaacggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 39839082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 41754620 - 41754533
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggct-ccccataagtctcaatgttgatatc 93  Q
    |||||||| ||||| |||||||| |||||| ||||||||||||  ||||||||||| ||||||| ||||||||||| ||||| |||||||    
T  41754620 acatcattatcactcgtgtgattgctctttatgcaatgtgtcg--attcacacaagcgttggctcccccataagtcccaatggtgatatc 41754533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 281
Target Start/End: Original strand, 38796791 - 38796902
Alignment:
Q  172 gaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcata--tctaatgt 269  Q
    ||||| |||||| |||||||| ||||| |||||||  || |||| ||| || |||| |||||||  ||||||||||||| |||||| |||  |||||||     
T  38796791 gaagacatgttagtgtgtcaactgtgacttaaaatttcatattggatgaaagagtatatgttgagaaacatataagtgaaatgactaatatgtctaatgc 38796890  T
Q  270 cttaagattttg 281  Q
    ||||||||||||    
T  38796891 cttaagattttg 38796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 36727707 - 36727624
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||| ||||| |||||||  ||||||  |||||| |||||||||| |  |||||||| ||||||||||| ||||    
T  36727707 tgttaatgtgtcaattgtgacttaaaatttcacattagatgcaaaagtagatgttaagaaacatatatgtgagatgactaatat 36727624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 20106738 - 20106660
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||||||||| ||||||||||  | | |||||| ||| || ||||||| ||||| || ||||||||||||||||    
T  20106738 atgttaatgtgtcaaatgtgagttaacgttatacattggatggaagagtagattttgaataaaatataagtgagatgac 20106660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 40599731 - 40599682
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||||| | |||||||||||||||||| |||||| |||||||    
T  40599731 agagtctcatacttgaggaagagatgttaatgtgttaagtgtaagttaaa 40599682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 45659829 - 45659927
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||||||| |||||  | ||||||||||| ||||||| ||||| | ||| | ||| |||| ||||||  |||||| ||||| |||||||||||||||||    
T  45659829 agagtctcacacttatgggagagatgttaaagtgtcaattgtgactcaaagttacaaattggatgcaa--gtagatcttgaaaaacatataagtgagatg 45659926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 19994490 - 19994423
Alignment:
Q  190 caagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc 258  Q
    |||||||||||||||||  || |||| |||||| |||||||| ||| ||| ||||||||||||||||||    
T  19994490 caagtgtgagttaaaatttcaaattgtatgcaagagtagatg-tgagcaatatataagtgagatgactc 19994423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 41754081 - 41753978
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgact--catatctaatgtcttaagat 277  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| |||| |||||||||||||||||||||   ||||| ||||||||||| |    
T  41754081 gttaatgtgtcatgtgtcatttaaacttatacattatatgtaagagtagatattgagcaacatataagtgagatgactaatatatccaatgtcttaaggt 41753982  T
Q  278 tttg 281  Q
    ||||    
T  41753981 tttg 41753978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 305
Target Start/End: Original strand, 6465994 - 6466287
Alignment:
Q  7 atcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgta-cccgcttc 104  Q
    ||||||||| |||||||| || |||||||| ||||||||||  | |||||  | ||||| |||||| ||||| | ||| | || ||||||| |||| |||    
T  6465994 atcattctcgcttgtgtggtttctctttctacaatgtgtcg--aatcacatcaatgttgactcccctataaggcccaacgatggtatcgtatcccggttc 6466091  T
Q  105 aacatttt-tgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||   ||||  | || |||| ||| |||||||||||| || |||||||||||||    ||||||| ||| ||||||| ||||    ||||| ||||    
T  6466092 aacattgggtggggggagggagtgcttcctggtggtggatcacagacacagagagtct----cttaatggagaaatgttaacgtgt----tgtgaattaa 6466183  T
Q  204 aataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccat 301  Q
    |||   |||||| |||||| |||| |||||||| ||||| | || ||||| | ||||||  | ||||  ||| ||||||||||||||  |||||||| ||    
T  6466184 aatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccaatgctttaggattttgggtgaagaagtgatgtcgat 6466283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 31967130 - 31967092
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  31967130 agtagatgttgaacaacatataagttatatgactcatat 31967092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 12454015 - 12454067
Alignment:
Q  231 gttgaacaacatataagtgagatgactcat--atctaatgtcttaagattttg 281  Q
    |||||||||||||||||||||||||| |||  ||||||||| ||||| |||||    
T  12454015 gttgaacaacatataagtgagatgacccataaatctaatgttttaagtttttg 12454067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 14903541 - 14903594
Alignment:
Q  209 cacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||| |||||| || |||||| |||||||||||||||||||| |||| ||||||    
T  14903541 cacaatgaatgtaagagtagacgttgaacaacatataagtgatatgattcatat 14903594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 5787287 - 5787203
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| ||||| || ||||||||| ||  ||| |  ||| |||||||||||||||| ||||||||  ||||||||| |||||    
T  5787287 atgttaatatgtcatgtatgagttaaagtactacaattgatggaatagtagatgttgaataacatatacatgagatgacccatat 5787203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 31963777 - 31963646
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac--tcatatctaatgtcttaag 275  Q
    ||||||||||||||| || |||||||  | | |||||  ||| || ||||||| |||| |||||||||||| |||||||    ||| |||||||||||||    
T  31963777 atgttaatgtgtcaaatgcgagttaactttatacattagatggaagagtagattttgagcaacatataagtcagatgaccaaaatacctaatgtcttaag 31963678  T
Q  276 attttgggtgaagttgtgatgtccatctcatt 307  Q
     |||   |||||||| || |||| ||||||||    
T  31963677 gtttcatgtgaagttctggtgtcaatctcatt 31963646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 39403904 - 39403820
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| ||| || ||||||||||| |   | |||||||| ||  ||| || |||||||||||||| ||||||||||||||||    
T  39403904 atgttaatttgttaaatgtgagttaaagttctatattgaatgaaaaggtaaattttgaacaacatatatgtgagatgactcatat 39403820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 183; Significance: 5e-99; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 5 - 303
Target Start/End: Original strand, 13228533 - 13228830
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||||||| |||||||||||||| |||||||||||||| || |  ||||||||||||||||||||||||||||| |||||| ||||||| || |||||||    
T  13228533 acatcattttcacttgtgtgattgctctttctgcaatgcgttg--attcacacaagtgttggctccccataagtttcaatggtgatatcatatccgcttc 13228630  T
Q  105 aacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||| |||   |||||||  ||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  13228631 aacatttttggggagcataagtggtttttggtggtggatcgcagacacaaaaagtctcatacttaatggagagatgttaatgtgtcaagtgtgagttaaa 13228730  T
Q  205 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtccatc 302  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||| |||    
T  13228731 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaat-tcttaaaattttgggtgaagttgtgatgtcaatc 13228829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 49953272 - 49953018
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    ||||||||||||||||||||| ||  | |||||||||||| |||  | |||||||||||||| ||||||  |||||| ||| | ||||||| ||  ||||    
T  49953272 gacatcattctcacttgtgtggttgttttttctgcaatgtttcg--aatcacacaagtgttgtctcccccgtaagtcccaacggtgatatcatatacgct 49953175  T
Q  103 tcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| ||||| |||| |||||||||||||||| |  ||||  ||||||||||| |||||  ||||||||||||||||||||||||  |||    
T  49953174 tcaacatttttggggagcggaagtgcttcgtggtggtggatcacggacacgaagagtctcatatttaattgagagatgttaatgtgtcaagtgtggatta 49953075  T
Q  203 aaataacacattgaat-gca-atagtagatgttgaacaacatataagtgagatgact 257  Q
    |||||||||||||||| ||| ||| ||||| |||||||| |||||||||||||||||    
T  49953074 aaataacacattgaatggcatataatagatattgaacaatatataagtgagatgact 49953018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 39974683 - 39974941
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||| |||||| ||  | ||||||||||||||||  | |||||||||||||| ||||||  |||||  ||||| ||||||| ||  ||||    
T  39974683 gacatcattctcacctgtgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtctcccccgtaagttccaatggtgatatcatatacgct 39974780  T
Q  103 tcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| || || |||| ||||||||||||||||||  ||||| ||||| || || |||||  ||||||| |||||||||||||||| ||||    
T  39974781 tcaacatttttggggagtggaagtgcttcgtggtggtggatcgcggacacaaagagtatcgtatttaattgagagatggtaatgtgtcaagtgtgggtta 39974880  T
Q  203 aaataacacattgaatgc--aatagtagatgttgaacaacatataagtgagatgactcata 261  Q
    |||||||| |||||||||   ||| ||||| ||||| ||||||| ||||  ||||||||||    
T  39974881 aaataacatattgaatgccatataatagatattgaataacatatcagtggaatgactcata 39974941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 307
Target Start/End: Original strand, 281823 - 282059
Alignment:
Q  69 ccccataagtctcaatgttgatatcgtacccgcttcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatactt 168  Q
    |||| |||||| ||||| ||||||| ||  |||||||||||||||| | ||||| |||| |  |||||||||||||||  ||||  |||||||| || ||    
T  281823 ccccgtaagtcccaatggtgatatcatatacgcttcaacatttttgtggagcggaagtgctgtgtggtggtggatcgcggacacgaagagtctcgtattt 281922  T
Q  169 aatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgc--aatagtagatgttgaacaacatataagtgagatgactcatatctaa 266  Q
    |||  |||||||||||||||||||||||| |||||||||||||||||||| |   ||| || || ||||||||||||| ||||||||||||||    |||    
T  281923 aattgagagatgttaatgtgtcaagtgtgggttaaaataacacattgaattccatataatatatattgaacaacatattagtgagatgactca----taa 282018  T
Q  267 tgtcttaagattttgggtgaagttgtgatgtccatctcatt 307  Q
    |||||| ||||||||| || |  ||||||||| ||||||||    
T  282019 tgtcttgagattttggatgtaactgtgatgtcaatctcatt 282059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 288
Target Start/End: Original strand, 11559461 - 11559631
Alignment:
Q  118 agcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaa 217  Q
    ||||| |||||||  || ||| ||||| || ||| ||||||||| | ||||| ||||||||||||||| ||| |||||||| |||||||   | |||| |    
T  11559461 agcgggagtggtttttgttggaggatcacaaacatagagagtctgacacttattgaagagatgttaatatgtaaagtgtgacttaaaatttgatattgta 11559560  T
Q  218 tgcaatagtagatgttgaacaacatataagtgagatgactcatatctaatgtcttaagattttgggtgaag 288  Q
    ||||| |||| ||||||||||||||||||||| |||||  ||||| ||||||||||||  ||||| |||||    
T  11559561 tgcaagagtaaatgttgaacaacatataagtgtgatgatccatatttaatgtcttaagcctttggatgaag 11559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 6554517 - 6554630
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagt 248  Q
    |||||||||||  || |||| |  ||||||||||||||||||||||||||||||||||   | | || ||| || ||||||| ||||| |||||||||||    
T  6554517 acacagagagttgcaaacttgaataagagatgttaatgtgtcaagtgtgagttaaaattctatagtggatggaagagtagattttgaataacatataagt 6554616  T
Q  249 gagatgactcatat 262  Q
    ||||||||||||||    
T  6554617 gagatgactcatat 6554630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 298
Target Start/End: Complemental strand, 17675385 - 17675240
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagat 253  Q
    ||||||||||||||| |   | ||| ||||| ||||||||||||| ||||| |  ||||||| ||||| || ||||||||||||||||||||||||| ||    
T  17675385 gagagtctcatacttgagagaaagaagttaacgtgtcaagtgtgatttaaagttccacattggatgcattaatagatgttgaacaacatataagtgatat 17675286  T
Q  254 gactcatat-ctaatgtcttaagattttgggtgaagttgtgatgtc 298  Q
     || ||||| |||||| |||||| ||| |||||||| |||| ||||    
T  17675285 aacccatatactaatgacttaaggtttagggtgaagatgtggtgtc 17675240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 28475752 - 28475656
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagat 230  Q
    ||||||||||| |  |||| |||||||| | |||||||| |||||||||||||||| |||||| |||||||||  ||||||| |||||| |||||||    
T  28475752 ggtggtggatcacgaacacggagagtctgacacttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagat 28475656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 50158172 - 50158268
Alignment:
Q  150 cacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataa 246  Q
    |||||||||| | | |||||||| ||||||||||||||||||||| ||||||||| |  ||||||  |||||| |||| ||||||| ||||||||||    
T  50158172 cacagagagtttgacacttaatggagagatgttaatgtgtcaagtatgagttaaagtttcacattttatgcaagagtatatgttgagcaacatataa 50158268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 50814634 - 50814721
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggct-ccccataagtctcaatgttgatatc 93  Q
    |||||||| ||||| |||||||| |||||| ||||||||||||  ||||||||||| ||||||| ||||||||||| ||||| |||||||    
T  50814634 acatcattatcactcgtgtgattgctctttatgcaatgtgtcg--attcacacaagcgttggctcccccataagtcccaatggtgatatc 50814721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 6560964 - 6561065
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||||||| | |||| | ||||||| |||||| |||| ||||||||||| |  || |||| || ||| |||||||||| ||||||||||||||||||||    
T  6560964 agagtctcacagttaagggagagatgctaatgtatcaaatgtgagttaaagttccatattggatacaaaagtagatgttaaacaacatataagtgagatg 6561063  T
Q  255 ac 256  Q
    ||    
T  6561064 ac 6561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 55050004 - 55050117
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgtt 233  Q
    |||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || ||||||||||    
T  55050004 ggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgtt 55050101  T
Q  234 gaacaacatataagtg 249  Q
    ||  ||||||||||||    
T  55050102 gagtaacatataagtg 55050117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 24183510 - 24183432
Alignment:
Q  167 ttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataa 246  Q
    |||||| |||||||||||||||| |||||| |||||||||  ||||||| |||||| |||||||| ||| ||||||||||    
T  24183510 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagatg-tgagcaacatataa 24183432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 36697769 - 36697844
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagat 253  Q
    |||||||||| |||| ||||||||||| |  ||||||| |||||| |||||||||| |||||||||||||| ||||    
T  36697769 atgttaatgtatcaaatgtgagttaaagttccacattggatgcaaaagtagatgttaaacaacatataagttagat 36697844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 314323 - 314412
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||| ||||||||||||   |   || ||  || ||||||| ||||| |||||||||||||||||||||||||    
T  314323 aagagatgttaatgtgtcaagcgtgagttaaaattctatggtggatagaagagtagattttgaataacatataagtgagatgactcatat 314412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 26290111 - 26289997
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| || ||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  26290111 tggtggtagatctcatatgcagagagtctcctactttagggagaaatattaatgtgtcaagtgcgagttaaagt--cacattgtatgtaagagtagatgt 26290014  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  26290013 tgagtaacatataagtg 26289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 35695054 - 35695134
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    ||||||||||||||||||||||||| | |  ||||| || ||||| |||||||| ||||||||||||||||||  |||||||    
T  35695054 atgttaatgtgtcaagtgtgagttagagttccacatgga-tgcaagagtagatgctgaacaacatataagtgatttgactca 35695134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 305
Target Start/End: Complemental strand, 42757698 - 42757527
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg--aatgcaatagtagat 230  Q
    |||||||||||| || |||| |||||||||    |||||  ||||||||||||||||||| ||||||| ||| |   ||||||   |||||| |||||||    
T  42757698 tggtggtggatcacagacacggagagtctc----ttaatagagagatgttaatgtgtcaattgtgagtaaaagtttaacattggatatgcaagagtagat 42757603  T
Q  231 gttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccatctca 305  Q
    |||||| ||||||| || ||||| | ||||||  ||||||||||| || ||||||||||   |||||||| ||||||    
T  42757602 gttgaaaaacatatgagggagatta-tcatatacctaatgtcttaggactttgggtgaaaaggtgatgtcgatctca 42757527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 42729545 - 42729464
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||| ||||||||||  |||||||||   ||| || ||||||||||| |||||||  |||||||||||||||||||||||||    
T  42729545 tgttaacgtgtcaagtg--agttaaaattcaacaatgtatgcaatagtacatgttgagaaacatataagtgagatgactcatat 42729464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 56340282 - 56340350
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagt 248  Q
    ||||| ||||||||||||| ||||| |  || |||| |||||||| |||||||||||||||||||||||    
T  56340282 gttaacgtgtcaagtgtgatttaaagttccatattggatgcaataatagatgttgaacaacatataagt 56340350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 305
Target Start/End: Complemental strand, 42756925 - 42756767
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagt 248  Q
    |||| |||| ||||| |||||| | ||||||||||||||||||  ||||||| ||| |   |||||| |||||| | || || |||| ||||||||||||    
T  42756925 acacggagaatctcacacttaagggagagatgttaatgtgtcatttgtgagtaaaacttctacattggatgcaagactatatattgagcaacatataagt 42756826  T
Q  249 gagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccatctca 305  Q
     | |||||  ||||  |||| |||||||| |||||| ||||| |||| |||| ||||||    
T  42756825 taaatgacaaatatacctaaagtcttaaggttttggatgaagatgtggtgtcaatctca 42756767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 316508 - 316586
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||||||||| || |||||||||| | |||||  ||| || ||||||| |||| |||||||||||| |||||||    
T  316508 atgttaatgtgtcaaatgcgagttaaaattatacattagatgaaagagtagattttgagcaacatataagtcagatgac 316586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 13918248 - 13918326
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||||||||| ||||||||||  | | |||||| ||| || ||||||| || |||||||||||| |||||||||    
T  13918248 atgttaatgtgtcaaatgtgagttaacgttatacattggatggaagagtagattttcaacaacatataattgagatgac 13918326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 11560199 - 11560299
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    |||||| || |||||| | |||||||||||||||||| | |||||||||| | | |||||| |||||| |||| || ||| |||| ||||| ||||||||    
T  11560199 agagtcccacacttaagggagagatgttaatgtgtcatgggtgagttaaacttatacattggatgcaagagtatatattg-acaatatatacgtgagatg 11560297  T
Q  255 ac 256  Q
    ||    
T  11560298 ac 11560299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 14266310 - 14266234
Alignment:
Q  212 attgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtga 286  Q
    |||| ||| |||||||||  |||||||||| |||||||||||||| |||||  ||||| ||||||||||| ||||||    
T  14266310 attggatgaaatagtagaatttgaacaacaaataagtgagatgacccatataactaatttcttaagatttagggtga 14266234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 52543094 - 52543045
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||||| | |||||||| |||||||||||||||| |||||||    
T  52543094 agagtctcatacttgaggaagagatattaatgtgtcaagtgtaagttaaa 52543045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 305
Target Start/End: Complemental strand, 22681319 - 22681165
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    ||||||||||| ||||||| ||| | |||||||||||||||||||||| | || |  |   |||  ||||| ||||   ||||||||| | ||||||||     
T  22681319 cagagagtctcgtacttaaggaataaatgttaatgtgtcaagtgtgaggt-aagtttcgtcttggctgcaagagtaaccgttgaacaataaataagtgat 22681221  T
Q  252 atgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccatctca 305  Q
    |||||||||||  ||||||||||||| ||| ||||| || |||| |||| ||||||    
T  22681220 atgactcatatacctaatgtcttaaggtttagggtggagatgtggtgtcaatctca 22681165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 9694459 - 9694408
Alignment:
Q  231 gttgaacaacatataagtgagatgactcat-atctaatgtcttaagattttg 281  Q
    |||||||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  9694459 gttgaacatcttataagtgagatgactcataatcaaatgtcttaagattttg 9694408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 256
Target Start/End: Original strand, 39977246 - 39977281
Alignment:
Q  221 aatagtagatgttgaacaacatataagtgagatgac 256  Q
    |||||||||||||||| |||||||||||||||||||    
T  39977246 aatagtagatgttgaataacatataagtgagatgac 39977281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 48683181 - 48683248
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaaca 241  Q
    ||||||||||||||||||| ||||||||||| |  ||||||||| |||| ||| || ||||| |||||    
T  48683181 agagatgttaatgtgtcaaatgtgagttaaagtttcacattgaaagcaagagtggaagttgagcaaca 48683248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 313117 - 313155
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  313117 agtagatgttgaacaacatataagttatatgactcatat 313155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 6553334 - 6553372
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  6553334 agtagatgttgaacaacatataagttatatgactcatat 6553372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 4237193 - 4237132
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttga 235  Q
    |||||||||||||||  | |||| |||||||||  |||||||||||||| ||| ||||||||    
T  4237193 agagatgttaatgtgctacgtgtaagttaaaattccacattgaatgcaagagtggatgttga 4237132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 13230882 - 13230986
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||| ||||||| |||||| ||||| |||||||  ||| || ||||| |||||||  |||||   || ||||||||||||||||   |||||||| ||||    
T  13230882 cagacagtctcacacttaaggaagatatgttaaaatgttaattgtgatttaaaatttcacataagatacaatagtagatgttgagacacatataaatgag 13230981  T
Q  252 atgac 256  Q
    |||||    
T  13230982 atgac 13230986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 13668274 - 13668194
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttga 235  Q
    ||||||||| |||| |  |||| ||||||||||||||| | ||| ||||| |  ||||||  |||||||||||||||||||    
T  13668274 agagtctcaaacttgagaaagatatgttaatgtgtcaattatgatttaaagttccacattacatgcaatagtagatgttga 13668194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 13681131 - 13681051
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttga 235  Q
    ||||||||| |||| |  |||| ||||||||||||||| | ||| ||||| |  ||||||  |||||||||||||||||||    
T  13681131 agagtctcaaacttgagaaagatatgttaatgtgtcaattatgatttaaagttccacattacatgcaatagtagatgttga 13681051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 13919329 - 13919377
Alignment:
Q  156 gagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||| |||||| | |||||||| |||||||||||||||| |||||    
T  13919329 gagtctcaaacttaacggagagatgtcaatgtgtcaagtgtgaattaaa 13919377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 38016177 - 38015878
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||||||| | |||||||||||| ||||||||||||| | |||  ||||||||||||| |||||||||||||||| |||||  |||||| || |||||||    
T  38016177 acatcattattacttgtgtgattgctctttctgcaatatatcg--attcacacaagtgctggctccccataagtcccaatggcgatatcatatccgcttc 38016080  T
Q  105 aacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||| | | ||| ||||||||||||||||||||||   ||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  38016079 aacatttttgtggaacggaagtggttcgtggtggtggatcgtggacacaaa-agtctcatacttgatggagagatgttaatgtgtcaagtgtgagttaaa 38015981  T
Q  205 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtccatc 302  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||    
T  38015980 ataacacattgaatgcaatagtagatgttgagcaacatataagtgagatgactcatatatctaatgacttaagattttgggtgaagttgtgatgtcaatc 38015881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 9012812 - 9012711
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||||||| |||||||| ||| || |||||||||||||||| |||||||||  |||| ||||| ||| |||||||||||| ||||||||||||||| ||    
T  9012812 agagtctcacacttaatggagacatattaatgtgtcaagtgttagttaaaatttcacaatgaattcaagagtagatgttgagcaacatataagtgagctg 9012713  T
Q  255 ac 256  Q
    ||    
T  9012712 ac 9012711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 9024952 - 9025041
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||||||||||||||||||||||| | | | || ||  || ||||||| ||||| |||||||||||||||||||||||||    
T  9024952 aagagatgttaatgtgtcaagtgtgagttaaaattatatagtggatagaagagtagattttgaataacatataagtgagatgactcatat 9025041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 33013981 - 33013852
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaa-tgca-atagtagatgttgaacaacatataagtgagatgactcatatctaatgtct 271  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| | || ||| || || ||||||||||||| ||||||||||||||    ||||||||    
T  33013981 agagatgctaatgtgtcaagtgtgggttaaaataacacattgaatttcatataatatatattgaacaacatattagtgagatgactca----taatgtct 33013886  T
Q  272 taagattttgggtgaagttgtgatgtccatctca 305  Q
    |||||  |||| || | |||||||||| ||||||    
T  33013885 taagaacttggatgtaattgtgatgtcaatctca 33013852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 27594641 - 27594522
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat-ctaatgtcttaagatt 278  Q
    ||||| ||||||||||||| ||||| |  |||||||||||||||| ||||||||||||||||||||||||| || || |||||  ||||| |||||| ||    
T  27594641 gttaacgtgtcaagtgtgatttaaagttccacattgaatgcaataatagatgttgaacaacatataagtgatataacccatatattaatgacttaaggtt 27594542  T
Q  279 ttgggtgaagttgtgatgtc 298  Q
    |  ||||||| |||| ||||    
T  27594541 taaggtgaagatgtggtgtc 27594522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 20966121 - 20966207
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||| ||||| |  ||||||| |||||||| |||||||||||| |||||||| | | |||||||||||    
T  20966121 agatgttaatgtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacgacatataaattatatgactcatat 20966207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 33014122 - 33014000
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccc-cataagtctcaatgttgatatcgtacccgct 102  Q
    ||||||||||||||||||||| ||  | ||||||||||||||||  | |||||||||||||| |||||   |||||| ||||| ||||||| ||  ||||    
T  33014122 gacatcattctcacttgtgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtctcccatgtaagtcccaatggtgatatcatatacgct 33014025  T
Q  103 tcaacatttttgggaagcggtagtg 127  Q
    |||||||||||||| ||||| ||||    
T  33014024 tcaacatttttggggagcggaagtg 33014000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 19910682 - 19910596
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||| | ||| |||| || |||||  ||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||    
T  19910682 agatgttaatgcgacaaatgtgtgtcaaaattccacattgtatgcaagagtagatattgaacaacatataagtgagatgagtcatat 19910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 8128546 - 8128432
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  8128546 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 8128449  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  8128448 tgagtaacatataagtg 8128432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 293
Target Start/End: Complemental strand, 29865987 - 29865827
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||| | | ||||| |||||||||||||||||| |||||||| |  ||||||| ||| || ||| |||||    
T  29865987 tggtggtagatctcatatgcagagagtctcgtacatgaggaagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagttgatgt 29865890  T
Q  233 tgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtg 293  Q
    |||  ||||||||||||  |||| ||||||  ||||| || |||| ||| |||||||| ||||    
T  29865889 tgagtaacatataagtgttatgattcatatacctaatttcataaggtttggggtgaagatgtg 29865827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 4062136 - 4062231
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtg 249  Q
    ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || ||||||||||||  ||||||||||||    
T  4062136 cagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgttgagtaacatataagtg 4062231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 298
Target Start/End: Complemental strand, 19320433 - 19320306
Alignment:
Q  174 agagatgttaatgtgt--caagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca-tatctaatgtc 270  Q
    |||||||||||||| |  |||||| |||||||| |  ||| ||  |||| | ||| ||||||||||||||||||||||| ||||| || || ||||||||    
T  19320433 agagatgttaatgtatatcaagtgcgagttaaagttgcacgttagatgcgacagtggatgttgaacaacatataagtgatatgacccactacctaatgtc 19320334  T
Q  271 ttaagattttgggtgaagttgtgatgtc 298  Q
    ||||| ||| ||| |||| |||| ||||    
T  19320333 ttaaggtttagggcgaagatgtggtgtc 19320306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 298
Target Start/End: Original strand, 10175893 - 10176006
Alignment:
Q  186 gtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttggg 283  Q
    |||||||||||||| ||||||  ||| | | |||||| | || |||||||  |||| ||||||| |||||| |||||  |||||||||||||| ||||||    
T  10175893 gtgtcaagtgtgagctaaaatttcacgt-gtatgcaagattatatgttgagtaacacataagtgtgatgacccatatatctaatgtcttaagactttggg 10175991  T
Q  284 tgaagttgtgatgtc 298  Q
    ||||| | |||||||    
T  10175992 tgaagatatgatgtc 10176006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 7333030 - 7332935
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtg 249  Q
    |||||||| || ||||| | | ||| |||||||||||||||||| ||||| ||||  ||||||| ||| || ||||||| ||||  ||||||||||||    
T  7333030 cagagagtttcgtacttgagggagaaatgttaatgtgtcaagtgcgagttcaaat--cacattggatgtaagagtagatattgagtaacatataagtg 7332935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 11770465 - 11770399
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgc 220  Q
    ||||||||||||||||| | ||||| ||||||||||| | ||||| ||||| | |||||||| ||||    
T  11770465 gagagtctcatacttaagggagagaagttaatgtgtcgaatgtgatttaaagttacacattggatgc 11770399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 33009903 - 33009855
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||| ||||||  ||||||||||||||||||| ||||||||||||    
T  33009903 agagtctcacacttaaa-aagagatgttaatgtgtcatgtgtgagttaaa 33009855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 2260887 - 2260855
Alignment:
Q  172 gaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||| ||||||||||||||||||||||||||||    
T  2260887 gaagtgatgttaatgtgtcaagtgtgagttaaa 2260855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 42797532 - 42797242
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgctt 103  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||  ||||||||||||||| ||||| | |||||||||||| ||||||| || | ||||    
T  42797532 gacatcattatcactcgtgtgattgctctttctgcaatgtgtcg--attcacacaagtgtttgctcctcgtaagtctcaatggtgatatcatatctgctt 42797435  T
Q  104 caacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||||||||| ||||| ||||||  |||||||||||| ||| | |||||||||||||| ||||||  | ||||||||||||||||||||||||||||    
T  42797434 caacatttttggggagcggaagtggtctgtggtggtggatagcagatacagagagtctcatgcttaatagaaagatgttaatgtgtcaagtgtgagttaa 42797335  T
Q  204 aataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca--tatctaatgtcttaagattttgggtgaagttgtga 294  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  42797334 aataacacattgaatgcaatagtatatgttgagaaacatataagtgagatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 42797242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 294
Target Start/End: Complemental strand, 23142042 - 23141752
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgtacccgctt 103  Q
    |||||||| ||||| |||||||| |||||| ||||||||||||  ||||||||||| ||||||||||| ||||||||||||| ||||||| || | ||||    
T  23142042 acatcattatcactcgtgtgattgctctttatgcaatgtgtcg--attcacacaagcgttggctcccccataagtctcaatggtgatatcatatctgctt 23141945  T
Q  104 caacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||||| ||| ||||| |||||| ||||||||||||| ||| | |||||||||||||| ||||||  ||||||||||| ||||||||| ||||||||    
T  23141944 caacattttcggggagcggaagtggtccgtggtggtggatagcagatacagagagtctcatgcttaatagagagatgttaacgtgtcaagtatgagttaa 23141845  T
Q  204 aataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca--tatctaatgtcttaagattttgggtgaagttgtga 294  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  23141844 aataacacattgaatgcaatagtagatgttgagaaacatataaatgagatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 23141752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 5 - 294
Target Start/End: Original strand, 13756376 - 13756666
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccc-cataagtctcaatgttgatatcgtacccgctt 103  Q
    |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||| ||||||| || |||||||| ||||| ||||||| || | ||||    
T  13756376 acatcattatcacttgtgtgattgctctttctgcaatgtgtcg--attcacacaagcgttggcttccacataagtcccaatggtgatatcatatctgctt 13756473  T
Q  104 caacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||||||||| ||||| |||||| ||||||||||||| | | | ||| |||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  13756474 caacatttttggggagcggaagtggtccgtggtggtggatagtagatacaaagagtctcatgcttaatatagatatgttaatgtgtcaagtgtgagttaa 13756573  T
Q  204 aataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca--tatctaatgtcttaagattttgggtgaagttgtga 294  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  13756574 aataacacattgaatgcaatagtagatgttgagaaacatttaagtgaaatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 13756666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 148 - 303
Target Start/End: Complemental strand, 10901547 - 10901390
Alignment:
Q  148 tacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataag 247  Q
    ||||| ||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||||| |||    
T  10901547 tacacggagagtctcgtacttaatggagagatgttaatgtatcaaatgtgagttaaaataacacattgaatgcaatagtagatgttgagtaacatacaag 10901448  T
Q  248 tgagatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||    
T  10901447 tgagatgactcgtatatctaatgtgttaagattttgggtgaagttgtgatgtcaatct 10901390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 21589082 - 21588824
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||| |||||| ||  | ||||||||||||||||  | |||||||||||||| ||||||  |||||  ||||| ||||||| ||  ||||    
T  21589082 gacatcattctcacctgtgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtctcccccgtaagttccaatggtgatatcatatacgct 21588985  T
Q  103 tcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||| || |||| ||||  |||| |||||||||||||||||   ||||  ||||| || || |||||  ||||||| |||||||||||| ||| ||||    
T  21588984 tcaacaattatggggagcgaaagtgcttcgtggtggtggatcgtggacacgaagagtatcgtatttaattgagagatggtaatgtgtcaagggtgggtta 21588885  T
Q  203 aaataacacattgaatg-ca-atagtagatgttgaacaacatataagtgagatgactcata 261  Q
    ||||||||||||||||| || ||| ||||| ||||| ||||||| ||||||||||||||||    
T  21588884 aaataacacattgaatgtcatataatagatattgaataacatatcagtgagatgactcata 21588824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 30254504 - 30254663
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatat-aag 247  Q
    |||| ||||||||||||||||| | | ||||||||||||||||| |||||||||||||   ||| |  ||||||  ||| |||||||||||||||| |||    
T  30254504 acacggagagtctcatacttaacggaaagatgttaatgtgtcaaatgtgagttaaaattcgacaatagatgcaaacgtatatgttgaacaacatataaag 30254603  T
Q  248 tgag--atgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    ||||  | |||||||||  ||||||||  |||| ||||||||||| ||||||||||||||    
T  30254604 tgagacacgactcatatacctaatgtcaaaagactttgggtgaagatgtgatgtccatct 30254663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 45247765 - 45247875
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||||||||||| |||||| | |||||| ||||| |||||||||||||||||| |   || |||||||||| ||||  |||||||||| |||||| ||||    
T  45247765 cagagagtctcacacttaagggagagattttaatatgtcaagtgtgagttaaagttctacgttgaatgcaaaagtatgtgttgaacaaaatataaatgag 45247864  T
Q  252 atgactcatat 262  Q
    |||||||||||    
T  45247865 atgactcatat 45247875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 284
Target Start/End: Original strand, 23686598 - 23686732
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||||||| ||| |||||| | |||||||||||| |||||||||||||||||| |   |  |||||||||| |||| ||||||||||| |||||| ||||    
T  23686598 cagagagtatcacacttaagggagagatgttaatatgtcaagtgtgagttaaagttctaacttgaatgcaaaagtatatgttgaacaaaatataaatgag 23686697  T
Q  252 atgact--catatctaatgtcttaagattttgggt 284  Q
    ||||||   |||||| ||| |||||| ||||||||    
T  23686698 atgactgatatatctgatgacttaaggttttgggt 23686732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 40885741 - 40885851
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||| |||||  |||||||||||| |||||||  ||||||| |||||||| || ||||||||||||||||||||||     
T  40885741 cagagagtctcatacttgagagaaagaggttaacatgtcaagtgtgatttaaaatttcacattggatgcaataataaatgttgaacaacatataagtgat 40885840  T
Q  252 atgactcatat 262  Q
    || ||||||||    
T  40885841 ataactcatat 40885851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 23683105 - 23683214
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgaga 252  Q
    |||||||||||||||| |   | ||| || |||||||||||||| | ||||| |  ||||||| ||||||||||| ||||||||||| |||||||||| |    
T  23683105 agagagtctcatacttgagataaagaggtcaatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgata 23683204  T
Q  253 tgactcatat 262  Q
    ||||||||||    
T  23683205 tgactcatat 23683214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 288
Target Start/End: Original strand, 38290486 - 38290658
Alignment:
Q  118 agcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaa 217  Q
    ||||| ||||| || |||| ||||||| ||| || ||||||||||| | || |  |||||||||||||||||||||||||||||| |||   |||||  |    
T  38290486 agcgggagtggctcatggtagtggatcacatgcatagagagtctcacaattgaaaaagagatgttaatgtgtcaagtgtgagttataattttacattaca 38290585  T
Q  218 tgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaag 288  Q
    ||||| || | ||||| || |||||||||||| | ||||| ||||  |||||| ||||||| ||| |||||||    
T  38290586 tgcaagagaaaatgtttaaaaacatataagtgggttgactgatatacctaatgccttaagacttttggtgaag 38290658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 307
Target Start/End: Original strand, 13758881 - 13759030
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||||||||| ||||   |||||||||||||| |||||||||||||||  ||     ||| |||||| ||||| |||| |||||||||| |||||||||    
T  13758881 agagtctcatagttaaaagagagatgttaatgtatcaagtgtgagttaaccta-----ttggatgcaagagtagttgttaaacaacatattagtgagatg 13758975  T
Q  255 actc--atatctaatgtcttaagattttgggtgaagttgtgatgtccatctcatt 307  Q
    || |  ||| ||||||||||||| |||||||| ||  |||| |||| ||||||||    
T  13758976 acccgtatacctaatgtcttaaggttttgggtcaaaatgtggtgtcaatctcatt 13759030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 17888052 - 17888130
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||||||||| |||||||||| || | ||| || ||| || ||||||| |||||||||||||||||||||||||    
T  17888052 atgttaatgtgtcaaatgtgagttaacattatacactggatggaagagtagattttgaacaacatataagtgagatgac 17888130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 16313362 - 16313248
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  16313362 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 16313265  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  16313264 tgagtaacatataagtg 16313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Original strand, 34800789 - 34800903
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  34800789 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 34800886  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  34800887 tgagtaacatataagtg 34800903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 41527140 - 41527027
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagt 248  Q
    |||||||||||  || |||| |  ||||||| ||||||||||||||||||||||||||   | | || ||  || ||||||| ||||| |||||||||||    
T  41527140 acacagagagttgcaaacttgaataagagatattaatgtgtcaagtgtgagttaaaattctatagtggatagaagagtagattttgaataacatataagt 41527041  T
Q  249 gagatgactcatat 262  Q
    ||||||||||||||    
T  41527040 gagatgactcatat 41527027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 367212 - 367319
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||| ||| |||||| | ||| |||||||| |||||||||||||||||| |   |  |||||||||| |||| ||||||||||| |||||| |||||||    
T  367212 agagtatcacacttaagggagatatgttaatatgtcaagtgtgagttaaagttctaacttgaatgcaaaagtatatgttgaacaaaatataaatgagatg 367311  T
Q  255 actcatat 262  Q
    ||| ||||    
T  367312 actgatat 367319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 19263432 - 19263304
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaag 275  Q
    ||||||||||||||||||||||||||  |  | ||||| |||||| ||||   ||||||||||| |||||||| |||||||||||  |||||||||||||    
T  19263432 atgttaatgtgtcaagtgtgagttaag-tctcgcattggatgcaagagtaaccgttgaacaacaaataagtgatatgactcatatacctaatgtcttaag 19263334  T
Q  276 attttgggtgaagttgtgatgtccatctca 305  Q
     ||| || || || |||| |||| ||||||    
T  19263333 gtttaggatggagatgtggtgtcaatctca 19263304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 357546 - 357599
Alignment:
Q  209 cacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||    
T  357546 cacattggatgcaatagtaaatgttgaacaatatataagtgatatgactcatat 357599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 16220354 - 16220246
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcat--atctaatgtct 271  Q
    ||||||||||||||  || |||| ||||||||| | | |||||||| ||||||| || |||||||| ||||||||| || |||| ||  |||||||||||    
T  16220354 agagatgttaatgtaccatgtgtaagttaaaattataaattgaatgaaatagtatatattgaacaaaatataagtgggaagactaatacatctaatgtct 16220255  T
Q  272 taagatttt 280  Q
    |||| ||||    
T  16220254 taagctttt 16220246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 26622938 - 26622857
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaa-taacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc 258  Q
    ||||| ||||||||||||||||||| || |   ||||| |||  |||||||| |||||||||||||||||||||||||||||    
T  26622938 atgttgatgtgtcaagtgtgagttataagtctaacattaaataaaatagtaggtgttgaacaacatataagtgagatgactc 26622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 37251278 - 37251164
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || ||||||| |    
T  37251278 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatat 37251181  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  37251180 tgagtaacatataagtg 37251164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 16250152 - 16250039
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  |||||| |||| ||||| | ||||| |||||||||||||||||| ||| |||| |  ||||||| ||| || |||||||||    
T  16250152 tggtggtagatctcatatgcagagaatctcgtacttgaggaagaaatgttaatgtgtcaagtgcgagataaagt--cacattggatgtaagagtagatgt 16250055  T
Q  233 tgaacaacatataagt 248  Q
    |||  |||||||||||    
T  16250054 tgagtaacatataagt 16250039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 40260477 - 40260529
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||||||||||| | ||||||||||||||||||||||| | |||||||    
T  40260477 cagagagtctcatacttgaggaagagatgttaatgtgtcaagtataagttaaa 40260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 8358881 - 8358803
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||||||||| ||||||||||  | | ||| |  ||| || ||||||| |||||||||||||||||||||||||    
T  8358881 atgttaatgtgtcaaatgtgagttaacgttatacactcgatggaagagtagattttgaacaacatataagtgagatgac 8358803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 13758078 - 13758119
Alignment:
Q  221 aatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  13758078 aatagtagatgttgaataacatatacgtgagatgactcatat 13758119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 15342402 - 15342301
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||| ||| |||| || ||||||| ||||||| | |||||||||||||| | | | |||| ||| || | || || |||||||||||||||||||||||    
T  15342402 agagtttcacacttgattaagagatattaatgtattaagtgtgagttaaagttatatattggatggaagattacattttgaacaacatataagtgagatg 15342303  T
Q  255 ac 256  Q
    ||    
T  15342302 ac 15342301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 15431467 - 15431366
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||| ||| |||| || ||||||| ||||||| | |||||||||||||| | | | |||| ||| || | || || |||||||||||||||||||||||    
T  15431467 agagtttcacacttgattaagagatattaatgtattaagtgtgagttaaagttatatattggatggaagattacattttgaacaacatataagtgagatg 15431368  T
Q  255 ac 256  Q
    ||    
T  15431367 ac 15431366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 15522771 - 15522670
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||| ||| |||| || ||||||| ||||||| | |||||||||||||| | | | |||| ||| || | || || |||||||||||||||||||||||    
T  15522771 agagtttcacacttgattaagagatattaatgtattaagtgtgagttaaagttatatattggatggaagattacattttgaacaacatataagtgagatg 15522672  T
Q  255 ac 256  Q
    ||    
T  15522671 ac 15522670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8357749 - 8357693
Alignment:
Q  150 cacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaat 206  Q
    |||| ||||||||| ||||||||  || |||| ||||||||||||||||||||||||    
T  8357749 cacaaagagtctcaaacttaatgttgaaatgtcaatgtgtcaagtgtgagttaaaat 8357693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 42797206 - 42797103
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcata--tctaatgtcttaagat 277  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| |||| ||||||||||||||||||||| |||  || ||||||||||| |    
T  42797206 gttaatgtgtcacgtgtcatttaaagttatacattatatgtaagagtagatattgagcaacatataagtgagatgactaatatttccaatgtcttaaggt 42797107  T
Q  278 tttg 281  Q
    ||||    
T  42797106 tttg 42797103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 17871244 - 17871311
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataag 247  Q
    ||||||||||||||||||||||||| |   |||||||||| || |||| || |||| |||||||||||    
T  17871244 gttaatgtgtcaagtgtgagttaaagttttacattgaatgtaagagtaaatattgagcaacatataag 17871311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 18953425 - 18953362
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacat 242  Q
    |||||||||||||| ||||| |||||||   |||||| |||||| ||||||||||||| |||||    
T  18953425 tgttaatgtgtcaactgtgaattaaaatttgacattggatgcaagagtagatgttgaaaaacat 18953362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 21586532 - 21586497
Alignment:
Q  221 aatagtagatgttgaacaacatataagtgagatgac 256  Q
    |||||||||||||||| |||||||||||||||||||    
T  21586532 aatagtagatgttgaataacatataagtgagatgac 21586497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 23525197 - 23525268
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| ||||||||    
T  23525197 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaa 23525268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 45528252 - 45528310
Alignment:
Q  232 ttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaag 288  Q
    |||| |||||||||| |||||||||  ||||  ||||||||||||||||||||||||||    
T  45528252 ttgagcaacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaag 45528310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 14374999 - 14375117
Alignment:
Q  127 ggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagt 226  Q
    ||||| |||||||||||| | || || |||| | | | ||||||||||||||||||||| | |||| || |||| ||| |  || ||||  ||||| |||    
T  14374999 ggttcttggtggtggatcacgtatacggagactgtgacacttaatgaagagatgttaatttatcaattgagagtaaaactttcatattgtgtgcaaaagt 14375098  T
Q  227 agatgttgaacaacatata 245  Q
    ||||||||| |||||||||    
T  14375099 agatgttgaccaacatata 14375117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 14376132 - 14376166
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgt 187  Q
    |||||||||||||||||||||||| ||||||||||    
T  14376132 agagagtctcatacttaatgaagatatgttaatgt 14376166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 35226758 - 35226668
Alignment:
Q  114 gggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| | |||||||| || |||| |||| ||||  || |||||||||||||||| ||||| |||||| | |||||||| | |||||||    
T  35226758 gggaagctggagtggttcatgatggtagatcacatatgcaaagagtctcatacttaaggaagaaatgttagtatgtcaagtattagttaaa 35226668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 758098 - 758151
Alignment:
Q  168 taatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgca 221  Q
    ||||| ||| || |||||||||||||||| |||||||||  |||||||||||||    
T  758098 taatggagatattttaatgtgtcaagtgtaagttaaaattccacattgaatgca 758151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 5685867 - 5685916
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    ||||| ||||| |||||| | |||||||||||||||||| ||||||||||    
T  5685867 agagaatctcacacttaaaggagagatgttaatgtgtcatgtgtgagtta 5685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 261
Target Start/End: Complemental strand, 41787116 - 41787087
Alignment:
Q  232 ttgaacaacatataagtgagatgactcata 261  Q
    ||||||||||||||||||||||||||||||    
T  41787116 ttgaacaacatataagtgagatgactcata 41787087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 45245034 - 45245107
Alignment:
Q  226 tagatgttgaacaacatataagtgagatgactcatat-ctaatgtcttaagattttgggtgaagttgtgatgtc 298  Q
    ||||||||||||||||||||||||| || ||||||||  ||||| |||||| |||  ||||||| |||| ||||    
T  45245034 tagatgttgaacaacatataagtgatataactcatatattaatgacttaaggtttaaggtgaagatgtggtgtc 45245107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 4072889 - 4072945
Alignment:
Q  225 gtagatgttgaacaacatataagtgagatgactcatatctaatgtcttaagattttg 281  Q
    ||||||||||| |||||||||||| ||| ||  |||| ||||||||||||| |||||    
T  4072889 gtagatgttgagcaacatataagtaagaagatccataactaatgtcttaaggttttg 4072945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 23141716 - 23141613
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgact--catatctaatgtcttaagat 277  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| |||| ||||||| |||||||||||||   ||||| ||||||||||| |    
T  23141716 gttaatgtgtcatgtgtcatttaaacttatacattatatgtaagagtagatattgagcaacatacaagtgagatgactaatatatccaatgtcttaaggt 23141617  T
Q  278 tttg 281  Q
    ||||    
T  23141616 tttg 23141613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 45527334 - 45527389
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagat 277  Q
    |||||||||||| |||||||||||| |||||| ||  ||| |||||||||||||||    
T  45527334 agtagatgttgaccaacatataagttagatgagtcgtatacctaatgtcttaagat 45527389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 303
Target Start/End: Complemental strand, 43387344 - 43387047
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||| ||| |||||||||||||| || ||||| || ||||||   ||||||||||||||||| |||||||||||| ||||| ||||||| || ||| |||    
T  43387344 acattattttcacttgtgtgattgctttttctacattgtgtca--attcacacaagtgttggatccccataagtcccaatggtgatatcatatccgtttc 43387247  T
Q  105 aacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||| || |||   |||||||||||||| ||||||||| |||| ||||||||| |||||||   |||||||||||||||||||||||||||||||    
T  43387246 aacattttttgggagcaaaagtggttcgtggtg-tggatcgcagacacggagagtctcgtacttaacagagagatgttaatgtgtcaagtgtgagttaaa 43387148  T
Q  205 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtccatc 302  Q
    || ||||||||||||||||||||||||||||  ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||    
T  43387147 attacacattgaatgcaatagtagatgttgagaaacatataagtgaaatgactcgtatatctaatgtcttaagattttgggtgaagttgtgatgtcaatc 43387048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 22636447 - 22636310
Alignment:
Q  124 agtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaat 223  Q
    |||||||| |||| ||||||| || ||| ||||||||| |||||||||| |||||||||||| | ||||||||||||||||||   || ||||||||||     
T  22636447 agtggttcttggttgtggatcccaaacatagagagtcttatacttaatggagagatgttaatttttcaagtgtgagttaaaatttgactttgaatgcaag 22636348  T
Q  224 agtagatgttgaacaacatataagtgagatgactcata 261  Q
    |||||||||||| | ||||||||| ||| |||||||||    
T  22636347 agtagatgttgagctacatataagggaggtgactcata 22636310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 288
Target Start/End: Original strand, 47783134 - 47783270
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagat 253  Q
    ||||||||| || |||| ||| ||||||||||||||||||||||||||||| |  |||||||  ||||| ||||  |||| |||||||||||||||| ||    
T  47783134 gagagtctcgtatttaaggaatagatgttaatgtgtcaagtgtgagttaaagtttcacattggctgcaagagtaattgtttaacaacatataagtgatat 47783233  T
Q  254 gactcatat--ctaatgtcttaagattttgggtgaag 288  Q
    |||||||||   ||||| |||||| ||| ||||||||    
T  47783234 gactcatatacataatgccttaaggtttagggtgaag 47783270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 20306820 - 20306724
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||  ||||| |||||||||||||||||||    
T  20306820 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactcatat 20306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 40946518 - 40946611
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||  ||||| ||||||||||||||||    
T  40946518 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 40946611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 1992421 - 1992514
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| |||||||||||| |  |||  ||||| ||||||||||||||||    
T  1992421 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtag-ttatgagaaacatttaagtgagatgactca 1992514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 22541885 - 22541995
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||||||| ||| ||||||  ||||||||||||| || ||||||||||||||| |   |  |||||||||| |||| ||||||||||| |||||| ||||    
T  22541885 cagagagtatcacacttaagaaagagatgttaatatgccaagtgtgagttaaagttctaatttgaatgcaaaagtatatgttgaacaaaatataaatgag 22541984  T
Q  252 atgactcatat 262  Q
    |||||| ||||    
T  22541985 atgactgatat 22541995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 30001829 - 30001736
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||| ||||||||||||||||||||||| |||||||||   | |||| ||||||||||||||  |||  ||||| ||||||||||||||||    
T  30001829 acttaatggagagatgttaatgtgtcaagtgtaagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 30001736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 15524702 - 15524807
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||||||| ||| |||||| | |||||||||||| || ||||||||||||||| |   |  |||||||||| |||| ||||||||||| |||||| ||||    
T  15524702 cagagagtatcacacttaagggagagatgttaatatgccaagtgtgagttaaagttctaacttgaatgcaaaagtatatgttgaacaaaatataaatgag 15524801  T
Q  252 atgact 257  Q
    ||||||    
T  15524802 atgact 15524807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 17006606 - 17006492
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  17006606 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 17006509  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  17006508 tgagtaacatataagtg 17006492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 260
Target Start/End: Complemental strand, 21469893 - 21469816
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcat 260  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| ||||||||||| |||||||||| |||||||||    
T  21469893 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgactcat 21469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Original strand, 34159485 - 34159599
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  34159485 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 34159582  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  34159583 tgagtaacatataagtg 34159599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 49879097 - 49879228
Alignment:
Q  151 acagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtga 250  Q
    ||||||||||| | | |||| | ||||||||||||||  || |||||||||||||| | | |||||||| ||||||| || ||||||||| ||||||||     
T  49879097 acagagagtcttacatttaagggagagatgttaatgtaccatgtgtgagttaaaattataaattgaatgaaatagtatatattgaacaacgtataagtgg 49879196  T
Q  251 gatgactcat--atctaatgtcttaagatttt 280  Q
    || |||| ||  ||||||||| ||||| ||||    
T  49879197 gaagactaatacatctaatgttttaagctttt 49879228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 7844719 - 7844572
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||| ||||| ||||||| ||||| ||||| |   |||||| |||||||| |||||||||||||||||||||||||     
T  7844719 cagagagtctcatacttgagagaaagaggttaacgtgtcaattgtgatttaaagttctacattggatgcaataatagatgttgaacaacatataagtgat 7844620  T
Q  252 atgactcatat-ctaatgtcttaagattttgggtgaagttgtgatgtc 298  Q
    || || |||||  ||||| |||||| ||| | |||||| |||| ||||    
T  7844619 ataacccatatattaatgacttaaggtttagagtgaagatgtggtgtc 7844572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 19065823 - 19065744
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| ||||||||||| |||||||||| ||||| |||||    
T  19065823 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgacccatat 19065744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 19113713 - 19113634
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| ||||||||||| |||||||||| ||||| |||||    
T  19113713 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgacccatat 19113634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 22538395 - 22538474
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||| | ||||| |  ||||||| |||||||| || || |||||||| |||||||||| |||||||||||    
T  22538395 aatgtgtcaagtgttatttaaagttccacattggatgcaataataaatattgaacaatatataagtgatatgactcatat 22538474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 3838251 - 3838181
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||| |||| || | ||| |||||||||||||| | || |||||||||||||||||||||| |||||||    
T  3838251 ggtggtagatcacagatacaaagagtctcatacttgaggacgagatgttaatgtgtcaagtgtaagttaaa 3838181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 43385197 - 43385111
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||| |||||||| ||||||||| |   | | |  ||| |||||||||||||||| |||||||| ||||||||||||||||    
T  43385197 agatgttaatatgtcaagtatgagttaaagttctagaattgatggaatagtagatgttgaataacatatatgtgagatgactcatat 43385111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 8313508 - 8313411
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatg 231  Q
    ||||||||||| |  |||| |||||||| | |||||||| |||||||||||||| | |||||  |||||||||   |||||| |||||| ||||||||    
T  8313508 ggtggtggatcacgaacacggagagtctgacacttaatggagagatgttaatgtattaagtgaaagttaaaattttacattgtatgcaagagtagatg 8313411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 3981637 - 3981705
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataa 246  Q
    |||||||||||| |||||| | ||||| |   ||||||||||||| |||||||||||||||| ||||||    
T  3981637 atgttaatgtgtaaagtgtaaattaaagttttacattgaatgcaagagtagatgttgaacaatatataa 3981705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 3982729 - 3982760
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||||||||||||||||||||||||||    
T  3982729 aagagatgttaatgtgtcaagtgtgagttaaa 3982760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 45919511 - 45919473
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  45919511 agtagatgttgaacaacatataagttatatgactcatat 45919473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 49880577 - 49880615
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  49880577 agtagatgttgaacaacatataagttatatgactcatat 49880615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 16851963 - 16852024
Alignment:
Q  167 ttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtag 228  Q
    |||||| ||||||||||||||||  ||||| |||||||||  ||||||| |||||| |||||    
T  16851963 ttaatggagagatgttaatgtgttcagtgtaagttaaaatttcacattgtatgcaagagtag 16852024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 19099067 - 19098995
Alignment:
Q  214 tgaatgcaatagtagatgttgaacaacatataagtgagatgact--catatctaatgtcttaagattttgggt 284  Q
    ||||||||| |||| ||||||||||| |||||| ||||||||||   |||||| ||| |||||| ||||||||    
T  19099067 tgaatgcaaaagtatatgttgaacaaaatataaatgagatgactgatatatctgatgacttaaggttttgggt 19098995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 43385824 - 43385727
Alignment:
Q  159 tctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||| |||||| ||||| |||||||  |||||| ||||| ||||| |  |||||| ||| ||| ||||||||||||   |||||||| |||||||||    
T  43385824 tctcacacttaaggaagatatgttaaaatgtcaattgtgatttaaagttccacattaaatacaacagtagatgttgagacacatataaatgagatgac 43385727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 26531623 - 26531519
Alignment:
Q  194 tgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagattttgggtgaagttg 291  Q
    ||||||||||| |  ||||||  |||||||||||||||  ||| ||  |||||||||||||||||  ||||||||| | ||||| || ||||||||| ||    
T  26531623 tgtgagttaaagtttcacattagatgcaatagtagatgcagaaaaa--tataagtgagatgactcatatatctaatatattaaggttatgggtgaagatg 26531526  T
Q  292 tgatgtc 298  Q
    || ||||    
T  26531525 tggtgtc 26531519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 7e-80; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 29 - 290
Target Start/End: Original strand, 1599546 - 1599808
Alignment:
Q  29 ctctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgtacccgcttcaacatttttgggaagcggtagtg 127  Q
    |||||||||||||||||||  |||||||||||| |||||||||| ||||||| ||| | ||||||| ||   |||||||||||||| || ||||| ||||    
T  1599546 ctctttctgcaatgtgtcg--attcacacaagtattggctcccccataagtcccaaaggtgatatcatatatgcttcaacattttttgggagcggaagtg 1599643  T
Q  128 gttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagta 227  Q
    ||  |||||||||||| ||| | |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1599644 gtatgtggtggtggatagcagatacagagagtctcatgcttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagta 1599743  T
Q  228 gatgttgaacaacatataagtgagatgactca--tatctaatgtcttaagattttgggtgaagtt 290  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1599744 gatgttgagaaacatataagtgagatgactcatgtatctaatgtcttaagattttgggtgaagtt 1599808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 26894748 - 26894961
Alignment:
Q  10 attctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggct-ccccataagtctcaatgttgatatcgtacccgcttcaaca 108  Q
    ||||||| |||||||||| ||||||||||||||||| || |||||||||| |||||||| ||||||||||| ||||  ||||||  || || ||||||||    
T  26894748 attctcatttgtgtgatttctctttctgcaatgtgt-gt-attcacacaactgttggctaccccataagtcccaataatgatataatatccacttcaaca 26894845  T
Q  109 tttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataa 208  Q
    |||| ||| || || |||||||| ||||||||||| ||| |||| || |||||||||||||||| |||||||||||| | |||||||||| |||||||||    
T  26894846 ttttaggggagtggaagtggttcatggtggtggattgcagacacggatagtctcatacttaatggagagatgttaatatatcaagtgtgatttaaaataa 26894945  T
Q  209 cacattgaatgcaata 224  Q
    ||||||| ||||||||    
T  26894946 cacattggatgcaata 26894961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 295
Target Start/End: Complemental strand, 29214433 - 29214239
Alignment:
Q  102 ttcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtt 201  Q
    ||||||||| | ||| ||||| |||||||| |||||||||||| |  |||| |||||  ||| |||||||||||| ||||||| | || |||| | ||||    
T  29214433 ttcaacattgtgggggagcgg-agtggttcttggtggtggatcacccacacggagagcatcacacttaatgaagatatgttaacgagttaagtttaagtt 29214335  T
Q  202 aaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgat 295  Q
    |||||  ||||||| ||| || || |  |||||||||||||| ||||||||||||||||||  ||| |||||||||| ||||| ||||| ||||||    
T  29214334 aaaattccacattgtatgaaaaagcaattgttgaacaacatacaagtgagatgactcatatacctattgtcttaagactttggatgaagatgtgat 29214239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 31737288 - 31737206
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||| |||||||||||||  ||||||| |||||| |||||||||||||||||||| |||||| |||| ||||||    
T  31737288 gttaatgtgtcaattgtgagttaaaatttcacattggatgcaagagtagatgttgaacaacatacaagtgatatgattcatat 31737206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 282
Target Start/End: Original strand, 2976645 - 2976805
Alignment:
Q  124 agtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaat 223  Q
    |||||||| | ||||| |||| | ||| | |||||||| | |||| || |||| || ||| |||||||||||||||||||||   ||||||| ||| ||     
T  2976645 agtggttctttgtggtagatcacttacgcggagagtctaacacttgataaagaaatattattgtgtcaagtgtgagttaaaacttcacattgtatgaaag 2976744  T
Q  224 agtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgg 282  Q
    | ||||||||||||||||| ||||||||||||| |||||  || ||||||||||| |||||    
T  2976745 aatagatgttgaacaacatgtaagtgagatgacacatatacctcatgtcttaagactttgg 2976805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 33350372 - 33350293
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||| | ||||| |  ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  33350372 aatgtgtcaagtgttatttaaagttccacattgaatgcaatagtaaatgttgaacaatatataagtgatatgactcatat 33350293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 7428572 - 7428479
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||  ||||| ||||||||||||||||    
T  7428572 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 7428479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 307
Target Start/End: Complemental strand, 11554469 - 11554334
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca--tatctaatgtct 271  Q
    |||||||||||||||||| |||||||||||  |   |||||| |||||  ||||| |||| |||||||||| ||||||||||| ||  || |||||||||    
T  11554469 agagatgttaatgtgtcatgtgtgagttaaccttctacattggatgcaggagtagttgttaaacaacatattagtgagatgacccatgtacctaatgtct 11554370  T
Q  272 taagattttgggtgaagttgtgatgtccatctcatt 307  Q
    |||| |||||||| ||  |||| |||| ||||||||    
T  11554369 taaggttttgggtcaaaatgtggtgtcaatctcatt 11554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 21984182 - 21984261
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||    
T  21984182 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgactcatat 21984261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 21988808 - 21988918
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||||||| ||| |||||| | ||| |||||||| |||||||||||||||||| |   |  |||||||||| |||| ||||||||||| |||||| ||||    
T  21988808 cagagagtatcacacttaagggagatatgttaatatgtcaagtgtgagttaaagttctaacttgaatgcaaaagtatatgttgaacaaaatataaatgag 21988907  T
Q  252 atgactcatat 262  Q
    |||||| ||||    
T  21988908 atgactgatat 21988918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 23410202 - 23410088
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  23410202 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 23410105  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  23410104 tgagtaacatataagtg 23410088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 4852809 - 4852944
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca--tatctaatgtct 271  Q
    |||||||||||||||||| |||||||||||  |   |||||| |||||  ||||| |||| |||||||||| ||||||||||| ||  || | |||||||    
T  4852809 agagatgttaatgtgtcatgtgtgagttaaccttctacattggatgcaggagtagttgttaaacaacatattagtgagatgacccatgtaccgaatgtct 4852908  T
Q  272 taagattttgggtgaagttgtgatgtccatctcatt 307  Q
    ||||||||||| | ||  |||| |||| ||||||||    
T  4852909 taagattttggatcaaaatgtggtgtcaatctcatt 4852944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 256
Target Start/End: Original strand, 4031518 - 4031618
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagat 253  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||||  |  ||||||  ||  || ||| |||||||| |||||||||||||| ||    
T  4031518 gagagtctcatacttaaggaagagatgttaatgtgtcaa--gtgagttaaggttccacattagatataagagtggatgttgagcaacatataagtgatat 4031615  T
Q  254 gac 256  Q
    |||    
T  4031616 gac 4031618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 15878847 - 15878925
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||||||||| ||||||||||  | | |||||| ||| || ||||||| ||||||||||||||| |||||||||    
T  15878847 atgttaatgtgtcaaatgtgagttaacgttatacattggatggaagagtagattttgaacaacatataattgagatgac 15878925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 16279167 - 16279074
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||| | ||||||||||||||||||||| |||||||||   | |||| ||||||||||||||  |||  ||||| ||||||||||||||||    
T  16279167 acttaatggacagatgttaatgtgtcaagtgtaagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 16279074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 298
Target Start/End: Original strand, 24175021 - 24175141
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatga--ctcatatctaatgtcttaaga 276  Q
    |||||||||||||||||||| |||||||     | || |||||||| || ||||||| |||||||||||||||||||  || ||| ||||||| ||||||    
T  24175021 tgttaatgtgtcaagtgtgaattaaaattcagtaatgtatgcaataatatatgttgagcaacatataagtgagatgacccttatacctaatgt-ttaaga 24175119  T
Q  277 ttttgggtgaagttgtgatgtc 298  Q
     ||| ||||||| |||||||||    
T  24175120 cttttggtgaagatgtgatgtc 24175141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 249
Target Start/End: Original strand, 20872442 - 20872556
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| ||||||| ||||||||||||||||||| |  ||||||| ||| || |||||||||    
T  20872442 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaacgtgtcaagtgtgagttaaagt--cacattggatgtaagagtagatgt 20872539  T
Q  233 tgaacaacatataagtg 249  Q
    |||  | ||||||||||    
T  20872540 tgagtagcatataagtg 20872556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 19660426 - 19660319
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||||||||||||||   |  |||| || ||||| |||||||||||||| |  | |||||||| ||| ||||| ||||||||||||||||| ||| |||    
T  19660426 agagtctcatacttaagagatggatgatagtgtgttaagtgtgagttaaagttcctcattgaatccaagagtagttgttgaacaacatataaatgatatg 19660327  T
Q  255 actcatat 262  Q
     |||||||    
T  19660326 cctcatat 19660319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 24397965 - 24398047
Alignment:
Q  223 tagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    ||||| || |||| |||||||||| |||||||||| ||||  |||||||| |||||||||||||||||  |||||||| ||||    
T  24397965 tagtatatattgagcaacatataaatgagatgactaatatatctaatgtcgtaagattttgggtgaagaggtgatgtcaatct 24398047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 280
Target Start/End: Complemental strand, 9449690 - 9449581
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtc 270  Q
    |||||||||||| |||||||||||||||||  ||   |||||| ||| |  |||| || ||||| ||||||||||||||| |||||||||   ||||| |    
T  9449690 aagagatgttaacgtgtcaagtgtgagttaccattctacattggatggatgagtatattttgaaaaacatataagtgagaagactcatatgcataatgcc 9449591  T
Q  271 ttaagatttt 280  Q
    ||||||||||    
T  9449590 ttaagatttt 9449581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 26894975 - 26895011
Alignment:
Q  259 atatctaatgtcttaagattttgggtgaagttgtgat 295  Q
    |||||||||||| ||||||||||||||||||||||||    
T  26894975 atatctaatgtcataagattttgggtgaagttgtgat 26895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 26597684 - 26597589
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| |||||||||||| ||||||||||||| ||||||   |||||| | |||| |||| ||||   | ||||||||| |||||| ||||||||    
T  26597684 acttaatggagagatgttaatatgtcaagtgtgagctaaaattctacattgtaagcaaaagtatatgt--cagaacatataaatgagattactcatat 26597589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 28365724 - 28365786
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagta 227  Q
    |||||||| | ||||||||||||||||||||| |||||||||   | |||| |||||||||||    
T  28365724 acttaatggacagatgttaatgtgtcaagtgtaagttaaaattttatattgtatgcaatagta 28365786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 4851983 - 4852020
Alignment:
Q  225 gtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  4851983 gtagatgttgaataacatatacgtgagatgactcatat 4852020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 11555296 - 11555259
Alignment:
Q  225 gtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  11555296 gtagatgttgaataacatatacgtgagatgactcatat 11555259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 27436916 - 27436867
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| | |||||||| |||||||| ||||||||||||| ||||||||    
T  27436916 agagtctgaaacttaatgtagagatgtcaatgtgtcaagtgcgagttaaa 27436867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 1599848 - 1599951
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgact--catatctaatgtcttaagat 277  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| |||| |||||||||| ||||||||||   ||||| ||||||||||| |    
T  1599848 gttaatgtgtcatgtgtcatttaaacttatacattatatgtaagagtagatattgagcaacatataaatgagatgactaatatatccaatgtcttaaggt 1599947  T
Q  278 tttg 281  Q
    ||||    
T  1599948 tttg 1599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 20874179 - 20874231
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||| |||  ||||| | ||||||||||||||||||| |||||||||||    
T  20874179 cagagagtttcacgcttaagggagagatgttaatgtgtcaaatgtgagttaaa 20874231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 50 - 305
Target Start/End: Complemental strand, 50421 - 50164
Alignment:
Q  50 attcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttcaacatttttgggaagcggtagtggttcgtggtggtggatcgcata 149  Q
    |||||||||||||||||||| | | |||||  |||  ||||||| || |||||||||| ||||| || ||| | |||||||||| ||||||||||||  |    
T  50421 attcacacaagtgttggctctcgaaaagtcctaataatgatatcatatccgcttcaacgttttttgggagcagaagtggttcgtagtggtggatcgcgga 50322  T
Q  150 cacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtg 249  Q
    || |||||||||| ||||||||| |||||  ||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||  |    
T  50321 catagagagtctcgtacttaatggagagaatttaatatgtcaagtgtcagttaaaataacacgttgaatgcaatagtagatgtagaacaacatataaccg 50222  T
Q  250 agatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtccatctca 305  Q
    |||| ||||  ||||| ||||||| |||| ||||||||||||||||||||| ||||||    
T  50221 agataactcaaatatcaaatgtctcaagaatttgggtgaagttgtgatgtcaatctca 50164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 5e-56; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 50332060 - 50331915
Alignment:
Q  151 acagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtga 250  Q
    ||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  50332060 acagagagtttcatgcttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtga 50331961  T
Q  251 gatgactca--tatctaatgtcttaagattttgggtgaagttgtga 294  Q
    |||||||||  |||||||||||||||||||||||||||||||||||    
T  50331960 gatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 50331915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 36095949 - 36096207
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||| | |||| ||  | ||||||||||||||||  | ||||||||||||||  |||||  || ||| ||||| ||||||| ||  ||||    
T  36095949 gacatcattctcacctttgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtatcccccgtatgtcccaatggtgatatcatatacgct 36096046  T
Q  103 tcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||  ||||  ||||| || || |||||  ||||||  |||||||||||||||| ||||    
T  36096047 tcaacatttttggggagcggaagtgcttcgtggtggtggatcgcggacacgaagagtatcgtatttaattgagagattgtaatgtgtcaagtgtgggtta 36096146  T
Q  203 aaataacacattgaatgc--aatagtagatgttgaacaacatataagtgagatgactcata 261  Q
    |||||| |||||||||||   ||| | ||| ||||| ||||||| | ||||||||||||||    
T  36096147 aaataatacattgaatgccatataattgatattgaataacatatcaatgagatgactcata 36096207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 50332173 - 50332062
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgtacccgctt 103  Q
    |||||||| ||||| |||||||| |||||||||||||||| ||  ||||||||||| ||||||||||| ||||||| ||||| ||||||| || | ||||    
T  50332173 acatcattatcactcgtgtgattgctctttctgcaatgtgacg--attcacacaagcgttggctcccccataagtcccaatggtgatatcatatctgctt 50332076  T
Q  104 caacatttttggga 117  Q
    ||||||||||||||    
T  50332075 caacatttttggga 50332062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 40056502 - 40056649
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||||||||| ||||||||||||| ||||| |  ||||||| |||||||| |||||||||||||||||||||||||     
T  40056502 cagagagtctcatacttgagagaaagatgttaacgtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgat 40056601  T
Q  252 atgactcatat-ctaatgtcttaagattttgggtgaagttgtgatgtc 298  Q
    || || |||||  ||||| |||||| |||  ||||||| |||| ||||    
T  40056602 ataacccatatattaatgacttaaggtttatggtgaagatgtggtgtc 40056649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 20935084 - 20934988
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| |||||||||||||||||| ||||||||||||||   | |||| ||||||||||||||| |||  ||||| |||||||||||||||||||    
T  20935084 acttaatggagagatgttaatgtgtcaggtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgactcatat 20934988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 14044290 - 14044376
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||| ||||| |  || |||| ||||||||||| |||||||||||||| ||||||| ||||| |||||    
T  14044290 agatgttaatgtgtcaagtgtgatttaaagttccatattggatgcaatagtaaatgttgaacaacatttaagtgatatgacccatat 14044376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 17764120 - 17764216
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||| | || | |||| ||| ||| ||||||||||||||||| ||||||||    
T  17764120 acttaatggagagatgttaatgtgacaagtgtgagttaaaattccacattgtaagccagagtatatg-tgagcaacatataagtgagattactcatat 17764216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 19065440 - 19065536
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||| | || | |||| ||| ||| ||||||||||||||||| ||||||||    
T  19065440 acttaatggagagatgttaatgtgacaagtgtgagttaaaattccacattgtaagccagagtatatg-tgagcaacatataagtgagattactcatat 19065536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 30171283 - 30171174
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgaga 252  Q
    |||||||||||||||| |   | ||| || |||||||||||||| | ||||| |  ||||||| ||||||||||| ||||||||||| |||||||||| |    
T  30171283 agagagtctcatacttgagataaagaggtcaatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgata 30171184  T
Q  253 tgactcatat 262  Q
    ||||||||||    
T  30171183 tgactcatat 30171174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 32976558 - 32976462
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||| |||||||||||||| ||||||||||||||||||   | |||| ||||||||||||||  |||  ||||| |||||||||||||||||||    
T  32976558 acttaatggagagatgttaatgtatcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactcatat 32976462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 12746241 - 12746101
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||||||||||||| || | |||||||||| |||  | |||||||||||||| ||||||  ||| || ||||| ||||||| ||  ||||    
T  12746241 gacatcattctcacttgtgtgattgct-tctctgcaatgtatcg--aatcacacaagtgttgtctcccctgtaattcccaatggtgatatcatatacgct 12746145  T
Q  103 tcaacatttttgggaagcggtagtggttcgtggtggtggatcgc 146  Q
    |||||||||||||  ||||| | || || |||||||||||||||    
T  12746144 tcaacatttttggagagcggaaatgctttgtggtggtggatcgc 12746101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 20779566 - 20779644
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||||||||| |||||||||| || | ||| || ||| || ||||||| |||||||||||||||||||||||||    
T  20779566 atgttaatgtgtcaaatgtgagttaacattatacactggatggaagagtagattttgaacaacatataagtgagatgac 20779644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 42400470 - 42400377
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||| ||||||||||||||   | |||| ||||||||||||||  |||  ||||| ||||||||||||||||    
T  42400470 acttaatggagagatgttaatgtgtcacgtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 42400377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 19817518 - 19817404
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  19817518 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 19817421  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  19817420 tgagtaacatataagtg 19817404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 10020152 - 10020227
Alignment:
Q  212 attgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtg 285  Q
    |||||||| ||  |||||| |||||||||||||||||||||||||||||||   |||| |||||||||||||||||    
T  10020152 attgaatggaagggtagattttgaacaacatataagtgagatgactcatatacttaatatcttaagattttgggtg 10020227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 25225403 - 25225304
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaa 274  Q
    ||||||||| |||||  ||||||||||| |  ||||||||||||||||||||||| |||| || ||| ||||| |||||| |||||  ||||||||||||    
T  25225403 gatgttaatatgtcatttgtgagttaaagttccacattgaatgcaatagtagatggtgaaaaagatacaagtgtgatgacccatatacctaatgtcttaa 25225304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 20788453 - 20788532
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||| | ||||| |  ||||||| || |||||||| ||||||||||| |||||||||| |||||||||||    
T  20788453 aatgtgtcaagtgttatttaaagttccacattggattcaatagtaaatgttgaacaatatataagtgatatgactcatat 20788532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 52753015 - 52753117
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcat--atctaatgtct 271  Q
    |||||||||||||| | | || ||||||||||| | | |||||||| ||||||| || |||||||||||||||||| || |||| ||  |||||||||||    
T  52753015 agagatgttaatgtattatgtatgagttaaaattataaattgaatgaaatagtatatattgaacaacatataagtgcgaagactaatacatctaatgtct 52753114  T
Q  272 taa 274  Q
    |||    
T  52753115 taa 52753117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 39183069 - 39183183
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat-ctaatgtcttaagatt 278  Q
    ||||| ||||||||||||| ||||| |   | |||| |||||||| ||||||||||||||||||||||||| || || |||||  ||||| |||||| ||    
T  39183069 gttaacgtgtcaagtgtgatttaaagttctatattggatgcaataatagatgttgaacaacatataagtgatataacccatatattaatgacttaaggtt 39183168  T
Q  279 ttgggtgaagttgtg 293  Q
    | |||||||| ||||    
T  39183169 tagggtgaagatgtg 39183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 39187291 - 39187401
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||||||||||| |||||| | |||||| ||||| |||||||||||||||||| |   |  || ||||||| ||||  |||||||||| |||||| ||||    
T  39187291 cagagagtctcacacttaagggagagattttaatatgtcaagtgtgagttaaagttctatgttaaatgcaaaagtatgtgttgaacaaaatataaatgag 39187390  T
Q  252 atgactcatat 262  Q
    |||||| ||||    
T  39187391 atgactgatat 39187401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 30170006 - 30169901
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    |||||||| ||| |||||| | ||| |||||||| |||||||||||||||||| |   |  ||||||| || |||| ||||||||||| |||||| ||||    
T  30170006 cagagagtatcacacttaagggagatatgttaatatgtcaagtgtgagttaaagttctaacttgaatgtaaaagtatatgttgaacaaaatataaatgag 30169907  T
Q  252 atgact 257  Q
    ||||||    
T  30169906 atgact 30169901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 431968 - 432046
Alignment:
Q  166 cttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatat 244  Q
    ||||||| |||||| |||||||||||| |||||||||||||   |||||| |||||| |||| |||||||  |||||||    
T  431968 cttaatggagagatattaatgtgtcaattgtgagttaaaattcgacattggatgcaagagtatatgttgagaaacatat 432046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 273
Target Start/End: Complemental strand, 32970533 - 32970436
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtctta 273  Q
    |||||||| |||||| ||||||| ||| |  ||||||  |||||| |||||||| |||| || |||||||||||||||| |||||  |||||||||||    
T  32970533 atgttaatatgtcaaatgtgagtgaaagtttcacattagatgcaagagtagatgctgaaaaatatataagtgagatgacccatatacctaatgtctta 32970436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 280
Target Start/End: Complemental strand, 34849897 - 34849788
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactca--tatctaatgtc 270  Q
    |||||||||||||||||||  ||||| ||||| |  |||||||||| |||| ||||||| |||  || ||||||||||||| ||| |  ||  |||||||    
T  34849897 aagagatgttaatgtgtcatatgtgaattaaagtttcacattgaattcaatggtagatggtgaggaaaatataagtgagataacttatgtacataatgtc 34849798  T
Q  271 ttaagatttt 280  Q
    ||||||||||    
T  34849797 ttaagatttt 34849788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 2250975 - 2251056
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    |||||||||||||||||||||| ||||||||||    | |||| ||| |||  || || |||||||||||||||||||||||    
T  2250975 aagagatgttaatgtgtcaagtatgagttaaaaatttatattggatggaatgataaattttgaacaacatataagtgagatg 2251056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 14045389 - 14045470
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||| |||||||||||| |||||||||||||||   | |||| ||| ||| ||| |  |||||||||||||||||||||||    
T  14045389 aagaggtgttaatgtgtcgagtgtgagttaaaattttatattggatggaatggtaaaatttgaacaacatataagtgagatg 14045470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 281
Target Start/End: Complemental strand, 9611832 - 9611703
Alignment:
Q  155 agagtctcatacttaatgaagagatgt--taatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgaga 252  Q
    |||||||||||||||| ||||||||||  |||||||||| |||||| ||||| |   || ||| |||||||||||||| || | ||| || | |||||||    
T  9611832 agagtctcatacttaa-gaagagatgtgttaatgtgtcatgtgtgatttaaacttctacgttggatgcaatagtagattttaagcaaaatgttagtgaga 9611734  T
Q  253 tgactc--atatctaatgtcttaagattttg 281  Q
    |||| |  ||| ||||||||||||| |||||    
T  9611733 tgacccgtatacctaatgtcttaaggttttg 9611703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 50241485 - 50241569
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||||||||||||||||||   | | || ||  || |||| ||  |||| |||||||||||||||||||||||||    
T  50241485 atgttaatgtgtcaagtgtgagttaaaattctatagtggatataagagtaaattatgaataacatataagtgagatgactcatat 50241569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 6087930 - 6087838
Alignment:
Q  168 taatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||| ||||| | |||||||  |||||||||  |||| || |||||| | |||||||||| |||||||||||||  || ||||||||    
T  6087930 taatgaagagattttaatatctcaagtg--agttaaaattccacaatgtatgcaagattagatgttgagcaacatataagtggcataactcatat 6087838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 12744055 - 12744020
Alignment:
Q  221 aatagtagatgttgaacaacatataagtgagatgac 256  Q
    |||||||||||||||| |||||||||||||||||||    
T  12744055 aatagtagatgttgaataacatataagtgagatgac 12744020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 37835479 - 37835402
Alignment:
Q  225 gtagatgttgaacaacatataagtgagatgactcatatctaatgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    ||||||||||||||||||| |||||||||||||||||| ||   ||| | |||||||  ||||| |||| |||||||||    
T  37835479 gtagatgttgaacaacata-aagtgagatgactcatatatatgttctaatgattttgattgaagatgtggtgtccatct 37835402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 50413 - 50489
Alignment:
Q  231 gttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccatctca 305  Q
    ||||||||||| |||||||| |||||||||||  ||||||||||||| ||| || || || |||| |||| ||||||    
T  50413 gttgaacaacaaataagtgatatgactcatatacctaatgtcttaaggtttgggatggagatgtggtgtcaatctca 50489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 44904856 - 44904897
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||||||||||||| | |||||||||||||||| ||||||||    
T  44904856 agagtctcatacttgaggaagagatgttaatgtatcaagtgt 44904897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 14522 - 14647
Alignment:
Q  184 atgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgact--catatctaatgtcttaagattttg 281  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  14522 atgtatcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataaatgagatgactcacatatttaatgtcttaagattttg 14621  T
Q  282 ggtgaagttgtgatgtccatctcatt 307  Q
    ||||||||||||||||| ||||||||    
T  14622 ggtgaagttgtgatgtcaatctcatt 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 14373 - 14503
Alignment:
Q  12 tctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcc-ccataagtctcaatgttgatatcgtacccgcttcaacatt 110  Q
    |||||||||||||||| | |||||| |||||||| |  ||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||    
T  14373 tctcacttgtgtgattgccctttcttcaatgtgttg--attcacacaagtgttggctcctccataagtcttaatggtgatatcatatccgcttcaacatt 14470  T
Q  111 tttgggaagcggtagtggttcgtggtggtggat 143  Q
    |||| | |||||  |||||||||| ||||||||    
T  14471 tttgaggagcggatgtggttcgtgatggtggat 14503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 47277 - 47112
Alignment:
Q  135 gtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttg 234  Q
    |||||||||| | |||||||||||||| | | || ||  ||| |||||  ||| |||||||||||||||| |  ||| ||| ||| ||||||||||||||    
T  47277 gtggtggatcacttacacagagagtctaacatttgatagagaaatgttgttgtatcaagtgtgagttaaagtttcacgttgtatggaatagtagatgttg 47178  T
Q  235 aacaacatataagtgagatg--actcatatctaatgtcttaagattttgggtgaagttgtgatgtc 298  Q
    ||||||||||||||||||||  || |||| || ||||||||||| ||||||||||| |||| ||||    
T  47177 aacaacatataagtgagatgacacacatacctcatgtcttaagactttgggtgaagatgtggtgtc 47112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 41512 - 41449
Alignment:
Q  189 tcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgaga 252  Q
    ||||||||||||||||||  ||| ||| ||| || ||| |||||||||||| ||||||||||||    
T  41512 tcaagtgtgagttaaaatttcacgttgtatggaagagttgatgttgaacaatatataagtgaga 41449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 297
Target Start/End: Complemental strand, 38789060 - 38788897
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgtt 233  Q
    ||||||||||| || |||| |||||||| | |||||||| |||||||||||||||| |||||| |||||||||  ||||||| |||||| |||||||  |    
T  38789060 ggtggtggatcacaaacacggagagtctgacacttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagat-at 38788962  T
Q  234 gaacaacatataagtgagatgactcatatc-taatgtcttaagattttgggtgaagttgtgatgt 297  Q
    || |||||||||| | | ||||  |||||| ||||| ||| ||| ||||| ||||| ||||||||    
T  38788961 gagcaacatataaataatatgatccatatcgtaatgccttgagactttggatgaaggtgtgatgt 38788897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 275
Target Start/End: Original strand, 2452101 - 2452221
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagat 253  Q
    |||||||||||||||   |||||||| ||||||| |||||||||||||||| |  |||||||||||||| |||| |||| ||| ||||||||||||   |    
T  2452101 gagagtctcatacttggagaagagattttaatgtttcaagtgtgagttaaagtttcacattgaatgcaaaagtaaatgtcgaa-aacatataagtgtttt 2452199  T
Q  254 gactcatatctaatgtcttaag 275  Q
    |||||| | |||||| ||||||    
T  2452200 gactcaaacctaatgccttaag 2452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 43989681 - 43989777
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||  |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||| |||  ||||| |||||||||||| ||||||    
T  43989681 acttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgattcatat 43989777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 17510374 - 17510236
Alignment:
Q  97 cccgcttcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| ||| || || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17510374 cccgattcaacattttaggggagtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17510275  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttga 235  Q
    |||||||| |  ||||||  ||| || ||||||||||||    
T  17510274 gagttaaagtttcacattttatgtaagagtagatgttga 17510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 17542840 - 17542978
Alignment:
Q  97 cccgcttcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| ||| || || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17542840 cccgattcaacattttaggggagtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17542939  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttga 235  Q
    |||||||| |  ||||||  ||| || ||||||||||||    
T  17542940 gagttaaagtttcacattttatgtaagagtagatgttga 17542978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 298
Target Start/End: Original strand, 29912549 - 29912714
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| |   ||| ||||||||| ||||||||||||||||| |  ||||||| ||| || |||||||||    
T  29912549 tggtggtagatctcatatgcagagagtctcgtacttgagagagaaatgttaatgcgtcaagtgtgagttaaagt--cacattggatgtaagagtagatgt 29912646  T
Q  233 tgaacaacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtc 298  Q
    |||  ||||||||||||  ||||  |||||  ||||| || |||||||| |||||||| |||| ||||    
T  29912647 tgagtaacatataagtgttatgatccatatacctaatttcataagatttggggtgaagatgtgttgtc 29912714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 4120098 - 4120006
Alignment:
Q  159 tctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgag 251  Q
    ||||| |||||||| ||||||  ||| ||||||||||| |||||||||  ||||||| || ||| ||| |||||||| |||||||||||||||    
T  4120098 tctcacacttaatggagagatactaacgtgtcaagtgttagttaaaatttcacattggattcaaaagtggatgttgagcaacatataagtgag 4120006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 295
Target Start/End: Complemental strand, 6677207 - 6677088
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaag 275  Q
    |||||||| ||| ||||||||||||||||   | |||||||| ||  ||| || |||||||||||||| ||||||||||||||||  | |||||||||||    
T  6677207 atgttaatttgttaagtgtgagttaaaattctatattgaatgaaaaggtaaattttgaacaacatatatgtgagatgactcatataccaaatgtcttaag 6677108  T
Q  276 attttgggtgaagttgtgat 295  Q
     |||| | ||||| ||||||    
T  6677107 gttttagatgaagatgtgat 6677088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 45406685 - 45406737
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaat 206  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  45406685 gagagtctcatacttaatggagaaatgttaatgtgtcaattgtgagttaaaat 45406737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 17474890 - 17474752
Alignment:
Q  97 cccgcttcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| |||  | || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17474890 cccgattcaacattttaggggtgtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17474791  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttga 235  Q
    |||||||| |  ||||||  ||| || ||||||||||||    
T  17474790 gagttaaagtttcacattttatgtaagagtagatgttga 17474752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 235
Target Start/End: Original strand, 17578324 - 17578462
Alignment:
Q  97 cccgcttcaacatttttgggaagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| |||  | || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17578324 cccgattcaacattttaggggtgtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17578423  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttga 235  Q
    |||||||| |  ||||||  ||| || ||||||||||||    
T  17578424 gagttaaagtttcacattttatgtaagagtagatgttga 17578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 42079050 - 42078960
Alignment:
Q  167 ttaatgaagagatgttaatgtgtcaagtgtgagttaaaat--aacacattgaatgcaatagtagatgttgaacaacatataagtgagatga 255  Q
    |||| |||||||||||||||||||| |||||||||||| |   | |||||  |||||| ||||||| |||| |||||| ||||||||||||    
T  42079050 ttaaggaagagatgttaatgtgtcatgtgtgagttaaacttctatacatttgatgcaagagtagatattgagcaacatgtaagtgagatga 42078960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 2927976 - 2928038
Alignment:
Q  219 gcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaagattt 279  Q
    |||| ||||||||||||||||||||||||| ||  ||| |||||  |||||||||||||||||    
T  2927976 gcaaaagtagatgttgaacaacatataagttaggagacccatataactaatgtcttaagattt 2928038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 4110437 - 4110362
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatga 255  Q
    ||||||||||||||  | || |||||| ||  |||||||||||||||||| || |||| |||||| ||||||||||||    
T  4110437 atgttaatgtgtca--tatgggttaaactactacattgaatgcaatagtatatattgagcaacatgtaagtgagatga 4110362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 24708451 - 24708517
Alignment:
Q  182 taatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagt 248  Q
    ||||||||||| | ||||||||||| | |||||| ||| || |||| ||||||| ||||||||||||    
T  24708451 taatgtgtcaattatgagttaaaattatacattgtatgtaagagtatatgttgagcaacatataagt 24708517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 26374649 - 26374611
Alignment:
Q  221 aatagtagatgttgaacaacatataagtgagatgactca 259  Q
    |||||||||||||||| || |||||||||||||||||||    
T  26374649 aatagtagatgttgaataagatataagtgagatgactca 26374611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 15464443 - 15464394
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    ||||||||||| |||||| | ||||||| |||||||||| ||||||||||    
T  15464443 agagagtctcacacttaaggtagagatgctaatgtgtcatgtgtgagtta 15464394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 45610390 - 45610345
Alignment:
Q  211 cattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    ||||||||| || |||||||| |||||||||||||||| |||||||    
T  45610390 cattgaatgaaaaagtagatggtgaacaacatataagttagatgac 45610345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 5786019 - 5785971
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| || | ||| | |||||||||||||||||||||||    
T  5786019 gagagtctcatactgaagggagataagttaatgtgtcaagtgtgagtta 5785971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 297
Target Start/End: Original strand, 20181326 - 20181468
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagat 253  Q
    ||||||||||||||||| | |||||||||||||  |||| ||||| ||||| |   | |||| || ||| ||||||| ||||| |||||| |||| | ||    
T  20181326 gagagtctcatacttaaaggagagatgttaatgcatcaaatgtgatttaaagttctatattggattcaagagtagatattgaaaaacatacaagtaatat 20181425  T
Q  254 gactc--atatctaatgtcttaagattttgggtgaagttgtgatgt 297  Q
    ||| |  ||| ||||||   |||| |||||||||||| ||||||||    
T  20181426 gacccgtatacctaatg---taaggttttgggtgaagatgtgatgt 20181468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 29268 - 29168
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||||||| | |||| | ||| |||||||||| |||| ||||||||||| |  ||||||| |||||| |||||||||| ||||||||||||||||||||    
T  29268 agagtctcacagttaagggagatatgttaatgtatcaaatgtgagttaaagttccacattggatgcaaaagtagatgttaaacaacatataagtgagatg 29169  T
Q  255 a 255  Q
    |    
T  29168 a 29168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 12571 - 12687
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtc 270  Q
    ||||||||||||||| | |||| ||||||||| | | |||||| ||| ||||||| || ||||||||||||||||||||||||| |  ||| || ||  |    
T  12571 aagagatgttaatgtatgaagtttgagttaaagttatacattggatggaatagtatattttgaacaacatataagtgagatgacacgtatacctgatacc 12670  T
Q  271 ttaagattttgggtgaa 287  Q
    |||||||||||||||||    
T  12671 ttaagattttgggtgaa 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1345 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1345
Description:

Target: scaffold1345; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 1847 - 1942
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcata 261  Q
    |||||||  |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||| |||  ||||| |||||||||| |||||||    
T  1847 acttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagataactcata 1942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 303
Target Start/End: Original strand, 30812 - 30970
Alignment:
Q  146 catacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatata 245  Q
    |||||||| |||||| |||||||||   |||||| ||||||||||| |||||||||||  |   |||||   ||| |||||| || |||| |||||||||    
T  30812 catacacaaagagtcccatacttaagagagagatattaatgtgtcatgtgtgagttaacttct-acattaggtgcgatagtatatattgagcaacatata 30910  T
Q  246 agtgagatgactcatat--ctaatgtcttaagattttgggtgaagttgtgatgtccatct 303  Q
    | |||||||||| ||||  |||||||| |||||||||||||||||  |||||||| ||||    
T  30911 aatgagatgactaatatatctaatgtcataagattttgggtgaagaggtgatgtcaatct 30970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 6506 - 6424
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac 256  Q
    |||| ||||||||| |||| ||||||||||| |  || |||| |||||| | |||||||||||||||||||||||||||||||    
T  6506 agaggtgttaatgtatcaaatgtgagttaaagttccatattggatgcaaaaatagatgttgaacaacatataagtgagatgac 6424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 915 - 826
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||||||||||||||||| ||| |   | | || ||  || ||||||| ||||| |||||||||||||||||||||||||    
T  915 aagagatgttaatgtgtcaagtgtgagtaaaagttctatagtggatagaagagtagattttgaataacatataagtgagatgactcatat 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 7668 - 7537
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgac--tcatatctaatgtcttaag 275  Q
    ||||||||||||||| || |||||||  | | |||||| ||| || ||||||| |||| |||||||||||| |||||||    ||| |||||||||||||    
T  7668 atgttaatgtgtcaaatgcgagttaacgttatacattggatggaagagtagattttgagcaacatataagttagatgaccaaaatacctaatgtcttaag 7569  T
Q  276 attttgggtgaagttgtgatgtccatctcatt 307  Q
     |||   ||||||||||| |||| ||||||||    
T  7568 gtttcatgtgaagttgtggtgtcaatctcatt 7537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 2129 - 2091
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  2129 agtagatgttgaacaacatataagttatatgactcatat 2091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1750 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1750
Description:

Target: scaffold1750; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 371 - 279
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc 258  Q
    |||||||| ||||||||||||||| |||||||||||||||||   | |||| ||||||||||||||| |||  ||||| |||| ||||||||||    
T  371 acttaatggagagatgttaatgtggcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagcgagatgactc 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 5137 - 5233
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataa 246  Q
    |||| |||||||| | |||||||| |||||||||||||| | |||||| |||||||||  ||||||| |||||| |||||||| ||| ||||||||||    
T  5137 acacggagagtctgacacttaatggagagatgttaatgttttaagtgtaagttaaaatttcacattgtatgcaagagtagatg-tgagcaacatataa 5233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 261
Target Start/End: Original strand, 2229 - 2376
Alignment:
Q  117 aagcggtagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattga 216  Q
    |||||| |||| ||| ||||| |||||| || |||| ||||| ||    ||||||||||| ||||||||||||||||||| |||||||||  |||||||     
T  2229 aagcgggagtgattcttggtgttggatcacacacacggagagccttgaccttaatgaagatatgttaatgtgtcaagtgtaagttaaaattccacattgg 2328  T
Q  217 atgc---aatagtagatgttgaacaacatataagtgagatgactcata 261  Q
    ||||   | || |||||||||| ||||||| || |||||||| |||||    
T  2329 atgcaggagtaatagatgttgagcaacatacaaatgagatgattcata 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 37016 - 37129
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagt 248  Q
    |||||||||||  || |||| |  ||||||||||||||||||||||||||||||||||   | | || ||  || ||||||| ||||| |||||||||||    
T  37016 acacagagagttgcaaacttgaataagagatgttaatgtgtcaagtgtgagttaaaattctatagtggatagaagagtagattttgaataacatataagt 37115  T
Q  249 gagatgactcatat 262  Q
    ||||||| ||||||    
T  37116 gagatgattcatat 37129  T

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Target: scaffold0114; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 35454 - 35492
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  35454 agtagatgttgaacaacatataagttatatgactcatat 35492  T

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Target: scaffold0114; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 1376 - 1457
Alignment:
Q  181 ttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||||||||| ||  |   |||||||||| || | ||||| ||||| || |||||||||||||||| |||||    
T  1376 ttaatgtgtcaagtgtgagtgaatgttcaacattgaatggaagaatagattttgaataatatataagtgagatgacccatat 1457  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 31137 - 31023
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  31137 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 31040  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  31039 tgagtaacatataagtg 31023  T

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Target: scaffold1743 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1743
Description:

Target: scaffold1743; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 316 - 188
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaag 275  Q
    ||||||||||||||||||||||||||  |  | |||||  ||||| ||||  |||||||||||| |||||||| |||||||  |||||||||||||||||    
T  316 atgttaatgtgtcaagtgtgagttaag-tctcgcattggctgcaagagtaactgttgaacaacaaataagtgatatgactcatatatctaatgtcttaag 218  T
Q  276 attttgggtgaagttgtgatgtccatctca 305  Q
     ||| || || || |||| |||| ||||||    
T  217 gtttaggatggagatgtggtgtcaatctca 188  T

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Target: scaffold0377 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 12654 - 12554
Alignment:
Q  157 agtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaat--aacacattgaatgcaatagtagatgttgaacaacatataagtgagatg 254  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||| |   | |||||  |||||| |||| || |||| |||||| |||||||||||    
T  12654 agtctcacacttaaggaagagatgttaatgtgtcatgtgtgagttaaatttctatacattagatgcaagagtaaatattgagcaacatgtaagtgagatg 12555  T
Q  255 a 255  Q
    |    
T  12554 a 12554  T

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Target: scaffold0211 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 18539 - 18450
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat 262  Q
    |||||||||||||  |||||||||||||||||||   | | || ||  || ||||||| ||||| |||||||||||||||||||||||||    
T  18539 aagagatgttaattagtcaagtgtgagttaaaattctatagtggatagaagagtagattttgaataacatataagtgagatgactcatat 18450  T

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Target: scaffold0211; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 19745 - 19707
Alignment:
Q  224 agtagatgttgaacaacatataagtgagatgactcatat 262  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  19745 agtagatgttgaacaacatataagttatatgactcatat 19707  T

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Target: scaffold0268 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 19976 - 19862
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| || ||||| |  ||||||| ||| || ||||||| |    
T  19976 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgaattaaagt--cacattggatgtaagagtagatat 19879  T
Q  233 tgaacaacatataagtg 249  Q
    |||  ||||||||||||    
T  19878 tgagtaacatataagtg 19862  T

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Target: scaffold0061 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 45671 - 45618
Alignment:
Q  237 caacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaag 288  Q
    |||||||||| |||||||||  ||||  ||||||||||||||||||||||||||    
T  45671 caacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaag 45618  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 153116 - 153169
Alignment:
Q  237 caacatataagtgagatgactcatat--ctaatgtcttaagattttgggtgaag 288  Q
    |||||||||| |||||||||  ||||  ||||||||||||||||||||||||||    
T  153116 caacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaag 153169  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 128389 - 128292
Alignment:
Q  156 gagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagat 253  Q
    |||||||| | |||| ||| | ||||| |||||||| ||||||||||||||  || ||||  |||| ||||| || ||||  ||||||||||||||||    
T  128389 gagtctcacatttaaggaatatatgtttatgtgtcatgtgtgagttaaaattccatattggctgcagtagtatatattgagtaacatataagtgagat 128292  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 50446 - 50495
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| | |||||||| |||||||| ||||||||||||| ||||||||    
T  50446 agagtctgaaacttaatgtagagatgtcaatgtgtcaagtgcgagttaaa 50495  T

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Target: scaffold1819 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1819
Description:

Target: scaffold1819; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 223 - 179
Alignment:
Q  231 gttgaacaacatataagtgagatgactcatatctaatgtcttaag 275  Q
    |||||| |||||||||||||||||||||| ||  |||||||||||    
T  223 gttgaataacatataagtgagatgactcaaattaaatgtcttaag 179  T

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Target: scaffold1737 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1737
Description:

Target: scaffold1737; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 510 - 562
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||| |||  ||||| | ||||||||||||||||||| |||||||||||    
T  510 cagagagtttcacgcttaagggagagatgttaatgtgtcaaatgtgagttaaa 562  T

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Target: scaffold1104 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1104
Description:

Target: scaffold1104; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 1745 - 1701
Alignment:
Q  231 gttgaacaacatataagtgagatgactcatatctaatgtcttaag 275  Q
    |||||| |||||||||||||||||||||| ||  |||||||||||    
T  1745 gttgaataacatataagtgagatgactcaaattaaatgtcttaag 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 22806 - 22749
Alignment:
Q  11 ttctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcc 70  Q
    ||||||||||| |||||||||||||| |||||| |||  |||||||| | ||||||||||    
T  22806 ttctcacttgtttgattactctttctccaatgtatcg--attcacaccactgttggctcc 22749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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