View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_low_47 (Length: 282)
Name: NF10103_low_47
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_low_47 |
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Alignment Details
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 138 - 275
Target Start/End: Original strand, 8826159 - 8826296
Alignment:
| Q |
138 |
atctttctgagcttttctagtgccttttgatataacttgatggtaagctttatcatcaacttcaaattgtggtatattttgacattcaaatcttcttgta |
237 |
Q |
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| T |
8826159 |
atctttctgagcttttctagtgccttttgatataacttgatggtaagctttatcatcaacttcaaattgtggtatattttgatattcaaatcttcttgta |
8826258 |
T |
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| Q |
238 |
atattttcagtggggcatgtgcatatttacctttgctt |
275 |
Q |
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| T |
8826259 |
acattttcagtggggcatgtgcatatttacctttgctt |
8826296 |
T |
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