View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_low_51 (Length: 273)
Name: NF10103_low_51
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 38932258 - 38932026
Alignment:
| Q |
17 |
caggatcgtcaccagaaggttcgttatgtgaaacagggtgaccttattgctattccacctggtgttccttactggacctacaattacggcaataccccgc |
116 |
Q |
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| T |
38932258 |
caggatcgtcaccagaaggttcgttatgtgaaacagggtgaccttattgctattccacctggtgttccttactggacctacaattacggcaatacccctc |
38932159 |
T |
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| Q |
117 |
ttattattgtcactctcctcgacacttccaataaactaaaccaactcgatcgtatcccaagagtaagcaacattaattataatctaacaattactcctaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38932158 |
ttattattgtcactctcctcgacacttccaataaactaaaccaactcgatcgtatcccaagagtaagcaacattaattataatctaacaattactcctaa |
38932059 |
T |
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| Q |
217 |
atgcaaccaactttgttatatataaatgattca |
249 |
Q |
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||||||||||||||||||||||||||| ||||| |
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| T |
38932058 |
atgcaaccaactttgttatatataaatcattca |
38932026 |
T |
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