View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_low_89 (Length: 232)
Name: NF10103_low_89
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_low_89 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 3175335 - 3175527
Alignment:
| Q |
25 |
tcatttgcttcttaatatatgaaaaattcttacatatggttttaaattgtgatagagcttgaagaggccaaaattattctggatttcagcagctgcacca |
124 |
Q |
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| T |
3175335 |
tcatctgcttcttaatatatgaaaaattcttacatatggttttaaattgtgatagagcttgaagaggccaaaattattctggatttcagcagctgcacca |
3175434 |
T |
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| Q |
125 |
ttgacttcagttattctatcaaccattttagtcttttcaatgagacataagatcaataaaatagcaattgtaagaaaagacactctacctttg |
217 |
Q |
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| T |
3175435 |
ttgacttcagttattctatcaaccattttagtcttttcaatgagacataagatcaataaaatagcaattgtaagaaaagacactctacctttg |
3175527 |
T |
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