View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10104A_low_1 (Length: 867)
Name: NF10104A_low_1
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104A_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 789; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 789; E-Value: 0
Query Start/End: Original strand, 23 - 851
Target Start/End: Complemental strand, 4123308 - 4122480
Alignment:
| Q |
23 |
aaataattttaatttttaggaaaatgtttggtagacacctaaacaccttaagcgagagagacagagagaaataacaagagtgatgtgataaatttgatat |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4123308 |
aaataattttaatttttaggaaaatgtttggtagacacctaaacaccttaagcgagagagacagagagaaataacaagagtgatgtgatagatttgatat |
4123209 |
T |
|
| Q |
123 |
gttggtgatgtgataggaagagagataaagagaaaatgaagtgttaaatgagtgtttggaaaattggggtgtccaaatatcattgttttaatttttactg |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4123208 |
gttggtgatgtgataggaagagagataaagagaaaatgaagtgttaaatgagtgtttggaaaattggggtgtccaaatatcattgttttaatttttactg |
4123109 |
T |
|
| Q |
223 |
atcaaaatacgaataattatcttatgaggagtattatatcattgttaaatgattgtgatattagtatttatttccacttttttacagaatttgactgtcg |
322 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4123108 |
atcaaaatacgaataattatcttatgaggagtattatatcattgttaaatgattgtgatattagtgtttatttccacttttttacagaatttgactgtcg |
4123009 |
T |
|
| Q |
323 |
atgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtgga |
422 |
Q |
| |
|
| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4123008 |
acgggggtggtagtgttttgctcccctgtgataattacccaaattggttaagtttcaactccaaaggttattctgttgtttttgaagtccctcaagtgga |
4122909 |
T |
|
| Q |
423 |
aggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacaca |
522 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4122908 |
aggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacaca |
4122809 |
T |
|
| Q |
523 |
aagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtgg |
622 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
4122808 |
aagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacctggtgacaaagtgg |
4122709 |
T |
|
| Q |
623 |
agattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatcggtgaaaaaatagagcaatgccatgc |
722 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4122708 |
agattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatcggtgaaaaaatagagcaatgccatgc |
4122609 |
T |
|
| Q |
723 |
accaaataagaatgttgttggtggtgatgaaaatgaatgcgctgccaagagggtctctctgcaagtagagcacatagatgatactaaacaaagacaaaaa |
822 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4122608 |
accaaataagaatgttgttggtggtgctgaaaatgaatgcgctgccaagagggtctctctgcaagtagagcacatagatgatactaaacaaagacaaaaa |
4122509 |
T |
|
| Q |
823 |
agaagaaaactctagtagatgaatgatgt |
851 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4122508 |
agaagaaaactctagtagatgaatgatgt |
4122480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 291 - 851
Target Start/End: Original strand, 4362452 - 4363016
Alignment:
| Q |
291 |
tatttccacttttttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggt |
390 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4362452 |
tatttccactttt-tacagaatttgactgtcgatgggcgtggtagttttttgctccctggtgatgattacccaaattggttaagtttcaacgccaaaggt |
4362550 |
T |
|
| Q |
391 |
tattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttg |
490 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| |||||| || |
|
|
| T |
4362551 |
tattctgtaatttttgaagtccctcaagtggaaggatgtagcttgaagacaataatgtgcattgtctattcttcaagcccatatgacataacatcagatg |
4362650 |
T |
|
| Q |
491 |
gccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagt |
590 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||| ||||||| |
|
|
| T |
4362651 |
gccttagaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcgtccttcgaaaatgcggactggcagagagt |
4362750 |
T |
|
| Q |
591 |
ggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaa |
690 |
Q |
| |
|
| ||||||||||||||| |||||||| ||||||||| ||| |||| | | |||| | ||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
4362751 |
gatatcaaatatggaacctggtgacaaagtggagatagttattgtaatggtgaacaatgtcattgtgacgaagacagcagtttatctcatatatgatgaa |
4362850 |
T |
|
| Q |
691 |
ccaatcggtgaaaaaatagagcaatgccatgcaccaaataagaatg---ttgttggtggtgatgaaaatgaatgcgctgccaagagggtctctctgcaag |
787 |
Q |
| |
|
||||| | | |||||| || || || || | | | ||| ||||| |||||||||||||||||||||||||| || |||||| || |||| |||| |
|
|
| T |
4362851 |
ccaattgacggaaaaatggaccactgtgattcccaagatacgaatgttattgttggtggtgatgaaaatgaatgctcttccaagattgtttctcctcaag |
4362950 |
T |
|
| Q |
788 |
tagagcacatagatgatactaaacaaagacaaaaaagaagaaaactctagt--agatgaatgatgt |
851 |
Q |
| |
|
||||| || ||||||| |||| |||||||||||||||||||||| || || ||||||||||||| |
|
|
| T |
4362951 |
tagagtccacagatgattctaatcaaagacaaaaaagaagaaaacactggtggagatgaatgatgt |
4363016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 301 - 830
Target Start/End: Original strand, 4346265 - 4346804
Alignment:
| Q |
301 |
tttttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtag |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
4346265 |
tttttacagaatttgactgtcgatgggcgtggtagttttttgctccccggtgataattacccaaattggtcaactttcaactccaaaggttattctgtaa |
4346364 |
T |
|
| Q |
401 |
tttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagt-------tggcc |
493 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| |||||| ||||| |
|
|
| T |
4346365 |
tctttgaagtccctcaagtggaaggacatagcttgaagacaataatgtgcattgtctattcttcaagcccagatgacataacatcagacatcagatggcc |
4346464 |
T |
|
| Q |
494 |
ttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggt |
593 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||| ||||| || | |
|
|
| T |
4346465 |
ttaaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcgtcctttgaaagggaggactggcagagaatgat |
4346564 |
T |
|
| Q |
594 |
atcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaacca |
693 |
Q |
| |
|
||| |||||||||| |||||||| ||||||||| ||||||||| | | |||| | ||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
4346565 |
atcgaatatggaacctggtgacaaagtggagatagttgttgttatggtgaacaatgtcattgtgacgaagacagcagtttatctcatatatgatgaacca |
4346664 |
T |
|
| Q |
694 |
atcggtgaaaaaatagagcaatgccatgcaccaaataagaatg---ttgttggtggtgatgaaaatgaatgcgctgccaagagggtctctctgcaagtag |
790 |
Q |
| |
|
|| | ||||||||||| || || |||||||| ||| ||||| |||||||||||||||||||||||||| || |||||||| | |||| ||||||| |
|
|
| T |
4346665 |
attgacgaaaaaatagaccattgtgatgcaccagatatgaatgttattgttggtggtgatgaaaatgaatgctcttccaagaggatttctcctcaagtag |
4346764 |
T |
|
| Q |
791 |
agcacatagatgatactaaacaaagacaaaaaagaagaaa |
830 |
Q |
| |
|
|| || ||||||| |||| |||||||||||||||||||| |
|
|
| T |
4346765 |
agtccacagatgattctaatcaaagacaaaaaagaagaaa |
4346804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 291 - 834
Target Start/End: Original strand, 4336802 - 4337341
Alignment:
| Q |
291 |
tatttccacttttttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggt |
390 |
Q |
| |
|
|||||||||||| | ||||||| |||||||||||||| ||||||| |||||||||||| ||||| ||| ||||||||||||| ||||||||| |||||| |
|
|
| T |
4336802 |
tatttccactttct-acagaatgtgactgtcgatgggtgtggtagctttttgctccccagtgatgattacccaaattggttagctttcaactcgaaaggt |
4336900 |
T |
|
| Q |
391 |
tattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttg |
490 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| || |
|
|
| T |
4336901 |
tattctgtaaattttgaagtccctcatgtggaaggacgtagcttgaagacaatgatgtgcattgtctattcttcaagcccaaatgacataacatcagatg |
4337000 |
T |
|
| Q |
491 |
gccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagt |
590 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||| ||| ||||||| |
|
|
| T |
4337001 |
gccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctttaagagagaggcattatcgtccttcgaaaatgaggagtggcagagagt |
4337100 |
T |
|
| Q |
591 |
ggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaa |
690 |
Q |
| |
|
||||||||||||||||| |||||| | ||| |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
4337101 |
ggtatcaaatatggaacctggtgataaagtcgagattgttgttgtttttgggaacagttatattgtgatgaggacaacagtttatctcatatatcatga- |
4337199 |
T |
|
| Q |
691 |
ccaatcggtgaaaaaatagagcaatgccatgcaccaaataagaatgtt---gttg---gtggtgatgaaaatgaatgcgctgccaagagggtctctctgc |
784 |
Q |
| |
|
|||||| | |||||||| ||||||||| || |||||||| |||| |||||||| |||||||||| |||||||||||| ||||||| | |
|
|
| T |
4337200 |
--------cgaaaaatttgagcaatgtcatgcaccagatgagaatgttctcgttgagagtggtgataaaaatgaatgtgctgccaagaggatctctcttc |
4337291 |
T |
|
| Q |
785 |
aagtagagcacatagatgatactaaacaaagacaaaaaagaagaaaactc |
834 |
Q |
| |
|
||||||||| ||||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
4337292 |
aagtagagcctgcagatgatttaaaacaaaaacagaaaagaagaaaactc |
4337341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 303 - 831
Target Start/End: Complemental strand, 4319686 - 4319152
Alignment:
| Q |
303 |
tttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtt |
402 |
Q |
| |
|
|||||||||||||||| |||||| || |||| |||||| ||||| |||||||||| ||| |||||||| |||||| || |||||| ||||||| || |
|
|
| T |
4319686 |
tttacagaatttgactatcgatgagcatggtcgtttttcactcccttgtgataattacccggattggttagctttcaattcagaaggttcttctgtaatt |
4319587 |
T |
|
| Q |
403 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatg |
502 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | | |||| |||||| ||||||| |||||| |
|
|
| T |
4319586 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaataatgtgcattgtctattcttcaagcccatacgacataacatcagatggccttgaaaatg |
4319487 |
T |
|
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatat |
602 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| ||| ||||||| ||| ||||||| |
|
|
| T |
4319486 |
tgttagtgataaatcacacaaagaccaccattcaactctataagagagaagcattatcctcctttgaaaatgaggagtggcagagagttgtaacaaatat |
4319387 |
T |
|
| Q |
603 |
ggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatcggtgaa |
702 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| |
|
|
| T |
4319386 |
ggaacctggtgacaaggtggagattgttgtcgtttttgggaacagtttcattgtgatgaagacagcagtttatctcatatatgatgaaccagtcgtcgaa |
4319287 |
T |
|
| Q |
703 |
aaaatagagcaatgccatgcaccaaataagaatgttgttggt------ggtgatgaaaatgaatgcgctgccaagagggtctctctgcaagtagagcaca |
796 |
Q |
| |
|
| | | |||||||| ||| ||||| ||||||||||| ||| | ||||||||||||||||| ||||||| |||| |||||| |||||||||| | |
|
|
| T |
4319286 |
atattggagcaatgtcatacaccagataagaatgttcttgttgatatcggtgatgaaaatgaatgtgctgccatgaggatctctcgccaagtagagccta |
4319187 |
T |
|
| Q |
797 |
tagatgatactaaacaaagacaaaaaagaagaaaa |
831 |
Q |
| |
|
||||||| | |||||| ||| |||||||||||| |
|
|
| T |
4319186 |
cagatgattttgaacaaaaacagaaaagaagaaaa |
4319152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 497 - 793
Target Start/End: Complemental strand, 4132805 - 4132521
Alignment:
| Q |
497 |
aaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatc |
596 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| || ||||||| ||||||||||| ||| ||||||| ||||| |
|
|
| T |
4132805 |
aaaatgtgttggtgataaatcacacgaagactaccattcagctctataagagagaggcattcgcctcctttgaaaatgaggagtggcagagagtagtatc |
4132706 |
T |
|
| Q |
597 |
aaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatc |
696 |
Q |
| |
|
||||||||||| |||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4132705 |
aaatatggaacctggtgacaaagtcgagattgt---tgtttttgggaacagtttcattgtgatgaagacagcagtttatctcatatatgatgaaccaatt |
4132609 |
T |
|
| Q |
697 |
ggtgaaaaaatagagcaatgccatgcaccaaataagaatgttgttggtggtgatgaaaatgaatgcgctgccaagagggtctctctgcaagtagagc |
793 |
Q |
| |
|
|||||||| | | |||||| ||||||| |||| || | ||||||||||||||||||| |||||||||||| || |||| |||||||||| |
|
|
| T |
4132608 |
ggtgaaaatttggggcaatgtcatgcac-----aaga----tggtagtggtgatgaaaatgaatgtgctgccaagaggttcactcttcaagtagagc |
4132521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 80 - 261
Target Start/End: Original strand, 4336581 - 4336751
Alignment:
| Q |
80 |
gagacagagagaaataacaagagtgatgtgataaatttgatatgttggtgatgtgataggaagagagataaagagaaaatgaagtgttaaatgagtgttt |
179 |
Q |
| |
|
|||| ||| ||||||| |||||| | |||||| |||||||| |||| |||||||||||||||||||| || ||| | | | ||||| ||||| |
|
|
| T |
4336581 |
gagagagaaagaaatagaaagagtaacgtgatagatttgataagttgatgatgtgataggaagagaga--------aattgaggagctgaatgattgttt |
4336672 |
T |
|
| Q |
180 |
ggaaaattggggtgtccaaatatcattgttttaatttttactgatcaaaatacgaataattatcttatgaggagtattatat |
261 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| | |||||||||| |||||||||| |||||| | |||||| |
|
|
| T |
4336673 |
cgaaaattggggtgtccaaatatcattgttgtaatttttatttatcaaaatac---taattatcttttgaggaatgttatat |
4336751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 714
Target Start/End: Original strand, 25568932 - 25569165
Alignment:
| Q |
484 |
tcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatgga |
583 |
Q |
| |
|
|||| ||||||||||||||| |||||| |||| |||| ||| |||||||||| |||| ||||||||||| ||| ||||| ||||| ||||| || |
|
|
| T |
25568932 |
tcagatggccttcaaaatgtcatggtgaaaaattacaccaagtccaccattcaggtctacaagagagaggcattagtttcctttgaaaacgaggaggggc |
25569031 |
T |
|
| Q |
584 |
agagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttg---gaaacagtttcattgtgatgaagacatcagtttatctcat |
680 |
Q |
| |
|
| | ||| ||||||| ||| |||| ||| ||| ||||||| ||||| ||||||||| | |||||||| |||| ||| ||| ||||||||||| | |
|
|
| T |
25569032 |
atatagtagtatcaagtatagaacctggaaacaaagtggaggttgtttttgtttttgagtggcgcagtttcaaagtgaagaatacaacagtttatctcgt |
25569131 |
T |
|
| Q |
681 |
atatgatgaaccaatcggtgaaaaaatagagcaa |
714 |
Q |
| |
|
||| ||||||| ||| || |||| ||| |||||| |
|
|
| T |
25569132 |
atacgatgaactaattggcgaaataatggagcaa |
25569165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 3746561 - 3746505
Alignment:
| Q |
117 |
tgatatgttggtgatgtgataggaaga--gagataaagagaaaatgaagtgttaaat |
171 |
Q |
| |
|
||||| ||||||||| ||||| ||||| |||||| ||||||||||||||||||||| |
|
|
| T |
3746561 |
tgataggttggtgatatgataagaagatagagatagagagaaaatgaagtgttaaat |
3746505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 551
Target Start/End: Original strand, 6676839 - 6676876
Alignment:
| Q |
514 |
aatcacacaaagaccaccattcaactctataagagaga |
551 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
6676839 |
aatcacacaaagacaaccattcaactctataaaagaga |
6676876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 108; Significance: 9e-54; HSPs: 28)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 386 - 693
Target Start/End: Complemental strand, 5101119 - 5100812
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatc |
485 |
Q |
| |
|
|||||| ||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||| | |||| |||| || |||| |||| |
|
|
| T |
5101119 |
aaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctatacttcaaccccagataacataacatc |
5101020 |
T |
|
| Q |
486 |
agttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaag |
585 |
Q |
| |
|
| ||||||| |||||||||| |||| |||| |||||||| |||||||||| ||||||||||| ||||| ||| |||||| ||| ||||||| | |
|
|
| T |
5101019 |
aagtggccttaaaaatgtgttagtgaaaaattacacaaaggccaccattcagctctataagagcgaggcattagtctcctttgaagatgaggaggctctg |
5100920 |
T |
|
| Q |
586 |
agagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatg |
685 |
Q |
| |
|
|| || ||||||| ||| |||| ||| ||| ||||||| | ||||||||||||| |||||||||||||||| |||||| ||||||||||| |||| | |
|
|
| T |
5100919 |
agggtagtatcaagtatagaacccggtaacaaagtggaggtcgttgttgtttttgagaacagtttcattgtgaaaaagacagcagtttatctcgtatacg |
5100820 |
T |
|
| Q |
686 |
atgaacca |
693 |
Q |
| |
|
|||||||| |
|
|
| T |
5100819 |
atgaacca |
5100812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 386 - 693
Target Start/End: Complemental strand, 5136220 - 5135913
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatc |
485 |
Q |
| |
|
|||||| ||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||| | |||| |||| || |||| |||| |
|
|
| T |
5136220 |
aaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctatacttcaaccccagataacataacatc |
5136121 |
T |
|
| Q |
486 |
agttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaag |
585 |
Q |
| |
|
| ||||||| ||||||||||||| | |||| |||||||| |||||||||| ||||| ||||| || || ||| ||||||| ||| ||||||| | |
|
|
| T |
5136120 |
aagtggccttaaaaatgtgttggtaaaaaattacacaaaggccaccattcagctctacaagagcgaagcattagcctcctttgaagatgaggaggctctg |
5136021 |
T |
|
| Q |
586 |
agagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatg |
685 |
Q |
| |
|
|| || ||||||| ||| |||| ||| ||| ||||||| | ||||||||||||| |||||||||||||||| |||||| ||||||||||| |||| | |
|
|
| T |
5136020 |
agggtagtatcaagtatagaacccggtaacaaagtggaggtcgttgttgtttttgagaacagtttcattgtgaaaaagacagcagtttatctcgtatacg |
5135921 |
T |
|
| Q |
686 |
atgaacca |
693 |
Q |
| |
|
|||||||| |
|
|
| T |
5135920 |
atgaacca |
5135913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 386 - 704
Target Start/End: Complemental strand, 5065753 - 5065432
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatg---tgcattgtctattcatcaagcccaaatggcatagc |
482 |
Q |
| |
|
|||||| ||||||| |||||||||||||||| || |||| |||| ||||||||||| ||| |||||||||||||| |||| ||| || |||||| |
|
|
| T |
5065753 |
aaggttcttctgtaacttttgaagtccctcaaatgaaagggcgtatgttgaagacaataatgatatgcattgtctattcttcaaccccggataacatagc |
5065654 |
T |
|
| Q |
483 |
atcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatgg |
582 |
Q |
| |
|
||| | |||||| |||| ||||||| | |||| ||||||| |||||||||| ||||||||||||||||||||| |||||| ||| ||||||| || |
|
|
| T |
5065653 |
atctgatggcctcacaaatttgttggtaaaaaattacacaaaatccaccattcagctctataagagagaggcgttaatctcctttgaagatgaggagggg |
5065554 |
T |
|
| Q |
583 |
aagagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatat |
682 |
Q |
| |
|
||||||| ||||||| ||| |||| ||| | | |||||| ||||||||||||||| ||| ||||| |||||| || |||| ||||||||||||||| |
|
|
| T |
5065553 |
cagagagtagtatcaagtattgaacctggaaataaagtggattttgttgttgtttttgagaacggtttcgttgtgaagaggacaacagtttatctcatat |
5065454 |
T |
|
| Q |
683 |
atgatgaaccaatcggtgaaaa |
704 |
Q |
| |
|
||||||||||||| | |||||| |
|
|
| T |
5065453 |
atgatgaaccaattgctgaaaa |
5065432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 376 - 724
Target Start/End: Complemental strand, 5126943 - 5126592
Alignment:
| Q |
376 |
ttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagaca---atgatgtgcattgtctattcatcaagcccaa |
472 |
Q |
| |
|
||||||||| |||||| ||| ||| ||||||||| ||||||||| |||| |||| ||||||| | ||||| |||||||||||||| |||| | |
|
|
| T |
5126943 |
ttcaactccgaaggttcttcggtaacttttgaagtacctcaagtgaaagggcgtacgttgaagaaagtaatgatatgcattgtctattcttcaaccttgg |
5126844 |
T |
|
| Q |
473 |
atggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaa |
572 |
Q |
| |
|
|| |||| |||||| ||||||| || ||||||||| |||| |||| ||| |||||||||||||||||||||||||||| | |||||| ||| | |
|
|
| T |
5126843 |
ataacataacatcagatggccttacaagcttgttggtgaaaaattacacgaaggccaccattcaactctataagagagaggcagcagtctcctttgaaga |
5126744 |
T |
|
| Q |
573 |
tgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtt |
672 |
Q |
| |
|
|||||| || ||||||| ||||||| ||| ||| |||| ||| ||| |||||||||||||||||| ||| |||||||||||| ||||||| | ||| |
|
|
| T |
5126743 |
tgaggagggggagagagtagtatcaagtatagaagctggtaacaaagttgagattgttgttgtttttaagaacggtttcattgtgaagaagacagctgtt |
5126644 |
T |
|
| Q |
673 |
tatctcatatatgatgaaccaatcggtgaaaaaatagagcaatgccatgcac |
724 |
Q |
| |
|
||||||||||||||||||||||| ||||||| || ||||||| ||||||| |
|
|
| T |
5126643 |
tatctcatatatgatgaaccaattggtgaaactatgaagcaatgtcatgcac |
5126592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 350 - 719
Target Start/End: Original strand, 5177694 - 5178066
Alignment:
| Q |
350 |
gtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatg-- |
447 |
Q |
| |
|
|||||| ||| ||| ||||||||| ||||| | | |||||| ||| ||| | ||||||||||||||||||||||| | | || |||||||||||| |
|
|
| T |
5177694 |
gtgatagttgtccagattggttaaccttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggtgcactttaaagacaatgatgat |
5177793 |
T |
|
| Q |
448 |
-tgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataag |
546 |
Q |
| |
|
||||||| |||||| |||| || || ||| ||||| ||||||| ||| ||||||| | ||| ||||||| |||||||||| || |||||| |
|
|
| T |
5177794 |
atgcattgactattcttcaaccctggataatataacatcaaatggccttgcaaacttgttggttaagaattacacaaaagccaccattcagctttataag |
5177893 |
T |
|
| Q |
547 |
agagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaaca |
646 |
Q |
| |
|
|||||||| ||| ||||||| ||| |||| || | ||||||| ||||||| ||| |||| | || ||| ||||||| ||||||||||||||| ||| |
|
|
| T |
5177894 |
agagaggcattagcctcctttgaagatgaagagggtcagagagtagtatcaagtatagaaccttgtaacaaagtggaggttgttgttgtttttgagaacg |
5177993 |
T |
|
| Q |
647 |
gtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatcggtgaaaaaatagagcaatgcca |
719 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||| |||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
5177994 |
gtttcattgtgaagaaaacaacagtttatctcgtatatgatgaaccaattggagaaaaaatggagcaatgcca |
5178066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 350 - 715
Target Start/End: Original strand, 5279519 - 5279887
Alignment:
| Q |
350 |
gtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatg-- |
447 |
Q |
| |
|
|||||| ||| ||| ||||||||| ||||| | | |||||| ||| ||| | ||||||||||||||||||||||| | | || |||||| ||||| |
|
|
| T |
5279519 |
gtgatagttgtccagattggttaaccttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggtgcactttaaagacattgatgat |
5279618 |
T |
|
| Q |
448 |
-tgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataag |
546 |
Q |
| |
|
||||||| |||||| |||| || || ||| ||||| ||||||| ||| ||||||||| ||| ||||||| |||||||||| || |||||| |
|
|
| T |
5279619 |
atgcattgactattcttcaaccctggataatataacatcaaatggccttgcaaacttgttggtgaagaattacacaaaagccaccattcagctttataag |
5279718 |
T |
|
| Q |
547 |
agagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaaca |
646 |
Q |
| |
|
|||||||| ||| ||||||| ||| |||| || | ||||||| ||||||| ||| |||| | || ||| ||||||| ||||||||||||||| ||| |
|
|
| T |
5279719 |
agagaggcattagcctcctttgaagatgaagagggtcagagagtagtatcaagtatagaaccttgtaacaaagtggaggttgttgttgtttttgagaacg |
5279818 |
T |
|
| Q |
647 |
gtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatcggtgaaaaaatagagcaat |
715 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||| |||||||||||||||| || |||||||| ||||||| |
|
|
| T |
5279819 |
gtttcattgtgaagaaaacaacagtttatctcgtatatgatgaaccaattggagaaaaaatggagcaat |
5279887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 361 - 695
Target Start/End: Complemental strand, 5353189 - 5352855
Alignment:
| Q |
361 |
ccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctatt |
460 |
Q |
| |
|
||||||||||||| ||| |||| |||||| ||||||| |||| | ||||||| |||||||| |||| |||||||||||||||||||||| ||||| |
|
|
| T |
5353189 |
ccaaattggttaaccttctactctgaaggttcttctgtaacttttcatgtccctctggtggaagggcgtaacttgaagacaatgatgtgcattatctata |
5353090 |
T |
|
| Q |
461 |
catcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatc |
560 |
Q |
| |
|
| |||| || |||| |||| | ||| ||||||| ||||||||||| | | |||| |||||||| | |||||||| || |||||||||||||| ||| |
|
|
| T |
5353089 |
cgtcaacccaaaataacataacttcatatggccttaaaaatgtgttgctaaaaaattacacaaaggctaccattcagctttataagagagaggcattaat |
5352990 |
T |
|
| Q |
561 |
ctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatg |
660 |
Q |
| |
|
||||| ||| ||||||| || ||||||| ||||||| |||||| | |||||||| ||| ||| | ||| ||||||| | || ||||||| |||| | |
|
|
| T |
5352989 |
ttcctttgaagatgaggaggggcagagagtagtatcaagtatggatcctggtgacaaagtagaggtggttattgttttcgagaattgtttcatcgtgaag |
5352890 |
T |
|
| Q |
661 |
aagacatcagtttatctcatatatgatgaaccaat |
695 |
Q |
| |
|
|||||| || ||||||| |||||||| ||||||| |
|
|
| T |
5352889 |
aagacaacaatttatctggtatatgataaaccaat |
5352855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 402 - 705
Target Start/End: Original strand, 5098221 - 5098524
Alignment:
| Q |
402 |
ttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaat |
501 |
Q |
| |
|
|||| |||| || ||||||||||| ||||||||||| ||||||||||||||||||||| | |||| |||| | ||| |||| ||||||| |||| |
|
|
| T |
5098221 |
ttttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaac |
5098320 |
T |
|
| Q |
502 |
gtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaata |
601 |
Q |
| |
|
|||| |||| ||| ||||||||| |||||||||| ||||||||||| ||||| || |||||| ||| ||||||| | |||| || |||||| || |
|
|
| T |
5098321 |
atgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagta |
5098420 |
T |
|
| Q |
602 |
tggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatcggtga |
701 |
Q |
| |
|
| |||| |||| ||| ||||||| | |||||||||| | |||||||||||||||| |||||| |||||||||| |||||||||||| ||| ||||| |
|
|
| T |
5098421 |
tagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaacaaattggtga |
5098520 |
T |
|
| Q |
702 |
aaaa |
705 |
Q |
| |
|
|||| |
|
|
| T |
5098521 |
aaaa |
5098524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 343 - 554
Target Start/End: Original strand, 5438962 - 5439173
Alignment:
| Q |
343 |
ctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaa |
442 |
Q |
| |
|
|||||| |||||| || ||||||||||||| || || || |||||| ||||||| |||| ||||||||||||||||||| |||| |||| | || |
|
|
| T |
5438962 |
ctccccggtgatagttatccaaattggttaacctttaattctgaaggttcttctgtaacttttcaagtccctcaagtggaagggcgtaatttgatgtcat |
5439061 |
T |
|
| Q |
443 |
tgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactcta |
542 |
Q |
| |
|
||||||||||||||||||| |||| || || |||| |||||| | ||||| |||||| ||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
5439062 |
tgatgtgcattgtctattcttcaactccggataacataacatcagatagccttataaatgtattggtgataaatcacacaaaggccaccattcagctcta |
5439161 |
T |
|
| Q |
543 |
taagagagaggc |
554 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
5439162 |
taagagtgaggc |
5439173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 503 - 695
Target Start/End: Complemental strand, 5242696 - 5242504
Alignment:
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatat |
602 |
Q |
| |
|
|||| |||| |||| |||||||| |||||||||| ||||| ||||||||||| || || |||| ||| ||||| | || |||||| |||| || ||| |
|
|
| T |
5242696 |
tgttagtgaaaaattacacaaaggccaccattcagctctacaagagagaggcagtagccgcctttgaagatgagaaggggctgagagtagtatgaagtat |
5242597 |
T |
|
| Q |
603 |
ggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaat |
695 |
Q |
| |
|
|||| |||| ||| ||||||| | ||| ||||||||| |||||||||||||||| ||||||| |||||||||| |||||||||||||||| |
|
|
| T |
5242596 |
agaacctggtaacaaagtggaggtcgtttttgtttttgagaacagtttcattgtgaagaagacagtagtttatctcgtatatgatgaaccaat |
5242504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 350 - 716
Target Start/End: Complemental strand, 5689243 - 5688874
Alignment:
| Q |
350 |
gtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatg-- |
447 |
Q |
| |
|
|||||| ||| ||| ||||||||| ||||| | | |||||| ||| ||| | ||||||||||||||||||||||| || | || |||||| ||||| |
|
|
| T |
5689243 |
gtgatagttgtccagattggttaaccttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggcgcactttaaagacattgatgat |
5689144 |
T |
|
| Q |
448 |
-tgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataag |
546 |
Q |
| |
|
||||| | |||||| ||| || || |||| ||||| ||||||| ||| ||||||||| ||| ||||||| |||||||||| || |||||| |
|
|
| T |
5689143 |
atgcatcgactattctacaaccctggataacataacatcaaatggccttgcaaacttgttggtgaagaattacacaaaagccaccattcagctttataag |
5689044 |
T |
|
| Q |
547 |
agagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaaca |
646 |
Q |
| |
|
|| ||||| ||| |||||| ||| |||| || | ||||||| ||||||| ||| |||| | || ||| ||||||| ||||| |||||||| ||| |
|
|
| T |
5689043 |
agcgaggcattagtctcctttgaagatgaagagggacagagagtagtatcaagtatagaaccttgtaacaaagtggaggttgtttctgtttttgagaacg |
5688944 |
T |
|
| Q |
647 |
gtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaatcggtgaaaaaatagagcaatg |
716 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||| |||||||||||||||| ||||||| || |||||||| |
|
|
| T |
5688943 |
gtttcattgtgaagaaaacaacagtttatctcgtatatgatgaaccaattcgtgaaaatatggagcaatg |
5688874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 402 - 687
Target Start/End: Original strand, 5398056 - 5398341
Alignment:
| Q |
402 |
ttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaat |
501 |
Q |
| |
|
||||||||| ||||| |||||||| |||| |||||||||||||||||||||||| ||| | |||| | || || |||| ||||||| |||| |
|
|
| T |
5398056 |
ttttgaagttcctcatgtggaagggcgtaacttgaagacaatgatgtgcattgtgtatacttcaactctggataatgtaacatctagtggccttaaaaac |
5398155 |
T |
|
| Q |
502 |
gtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaata |
601 |
Q |
| |
|
|||| ||||||||| |||||||| |||||||||| ||||||||||| |||||||||| |||||| ||| |||| || || | || || ||||||| || |
|
|
| T |
5398156 |
atgttagtgataaattacacaaaggccaccattcagctctataagagtgaggcgttattctcctttgaacatgaagaggggcaaagggtagtatcaagta |
5398255 |
T |
|
| Q |
602 |
tggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgat |
687 |
Q |
| |
|
| |||| |||| ||| ||| ||| |||| ||||||| | || ||||||||||| ||||||| |||||||||| |||||||| |
|
|
| T |
5398256 |
tagaacctggtaacaaagttgaggttgtctttgttttcgagaatgatttcattgtgaagaagacaacagtttatcttgtatatgat |
5398341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 503 - 690
Target Start/End: Original strand, 5346140 - 5346327
Alignment:
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatat |
602 |
Q |
| |
|
||||||||| |||| |||||||| | |||||||| || || ||||||||||| || || |||| ||| ||||||| | ||||||| ||||||| ||| |
|
|
| T |
5346140 |
tgttggtgaaaaattacacaaaggctaccattcagctatacaagagagaggcagtagccgcctttgaagatgaggagggccagagagttgtatcaagtat |
5346239 |
T |
|
| Q |
603 |
ggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaa |
690 |
Q |
| |
|
|||| |||| ||| ||||||| |||| |||||| ||| || |||||||||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
5346240 |
agaacctggtaacaaagtggaggttgtcgttgttattgagaatggtttcattgtgaagaagacagcaatttatctcatatatgatgaa |
5346327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 403 - 554
Target Start/End: Original strand, 5334190 - 5334340
Alignment:
| Q |
403 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatg |
502 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||| |||| |||| || || ||||| ||||||| |||| |
|
|
| T |
5334190 |
tttgaagttcctcaagtggaagggggtaacttgaagacaatgatgtgcattttctataattcaaccccagataatgta-catcaagtggccttaaaaaca |
5334288 |
T |
|
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagagaggc |
554 |
Q |
| |
|
|||| ||||||||| |||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
5334289 |
tgttagtgataaattacacaaaggccaccattcaactctataagagtgaggc |
5334340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 403 - 693
Target Start/End: Complemental strand, 5156297 - 5156007
Alignment:
| Q |
403 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatg |
502 |
Q |
| |
|
|||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| | |||| |||| || || ||| ||||||| |||| |
|
|
| T |
5156297 |
tttgaagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctatacttcaaccccagataatgtaacatgtagtggccttaaaaaca |
5156198 |
T |
|
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatat |
602 |
Q |
| |
|
|||| ||| |||| |||||||| |||||||||| || |||||||| ||||| || ||||||| ||| |||| || || |||| || ||||||| | | |
|
|
| T |
5156197 |
tgttattgaaaaattacacaaaggccaccattcagctttataagagtgaggcattggcctcctttgaagatgaagaggggcagagggtagtatcaagtct |
5156098 |
T |
|
| Q |
603 |
ggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaacca |
693 |
Q |
| |
|
|||| |||| ||| ||||||| | | ||||||| | | | ||||||||||| ||||||| |||||||||| |||| ||||||||| |
|
|
| T |
5156097 |
agaacctggtaacaaagtggaggtccattttgttttcgagattaatttcattgtgaagaagacaacagtttatcttgtatacgatgaacca |
5156007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 695
Target Start/End: Complemental strand, 5072966 - 5072674
Alignment:
| Q |
403 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatg |
502 |
Q |
| |
|
||||||||||||||||||||||| || | |||||||||||||| ||| |||||||||| ||| |||||| ||| ||||| |||||| |||| |
|
|
| T |
5072966 |
tttgaagtccctcaagtggaagggcgcatattgaagacaatgatatgcgttgtctattcttcaccaccaaataatgtagtatcagacggccttaaaaact |
5072867 |
T |
|
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatat |
602 |
Q |
| |
|
|| |||||| |||| |||| || ||||||||||||| |||||||||||||| ||| |||||| || |||| || | ||||| | ||||||| ||| |
|
|
| T |
5072866 |
tgatggtgaaaaattacactaaagccaccattcaactatataagagagaggcattagtctccttcaaagatgatgagggcgagagattagtatcaagtat |
5072767 |
T |
|
| Q |
603 |
ggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaat |
695 |
Q |
| |
|
|| | |||| || ||||||| |||| |||||| ||| ||| ||||||||||| |||||| | ||||||||||||| |||||| |||| |
|
|
| T |
5072766 |
agagcctggtaaccaagtggaggttgtcgttgttgttgagaacgatttcattgtgaaaaagacaataatttatctcatatacgatgaatcaat |
5072674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 551
Target Start/End: Complemental strand, 5124763 - 5124579
Alignment:
| Q |
368 |
ggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattca-tcaa |
466 |
Q |
| |
|
|||||| |||||| | |||||||| ||| | |||||| | || ||||||||| ||||||||| ||| |||||||| |||||||||||||||||| | | |
|
|
| T |
5124763 |
ggttaattttcaattgcaaaggttcttcaatggttttttatgttcctcaagtgtaaggacgtaacttaaagacaataatgtgcattgtctattcattgac |
5124664 |
T |
|
| Q |
467 |
gcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagaga |
551 |
Q |
| |
|
|| ||| ||||||||| | ||||||| ||| |||| |||||| |||| |||| ||| ||||||||||||||||||||||| |
|
|
| T |
5124663 |
tccaaaaaaacatagcatcggatggccttaaaactgtgatggtgaaaaattacacgaaggggaccattcaactctataagagaga |
5124579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 386 - 548
Target Start/End: Original strand, 5448603 - 5448765
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatc |
485 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||| ||| |||| | || ||||||||||||||||| | |||| |||| || || |||| |
|
|
| T |
5448603 |
aaggttcttctgtaacttttgaagtccctcaagtggaagagcgtcaattgacgtcattgatgtgcattgtctatacttcaaccccagataatgtaacatc |
5448702 |
T |
|
| Q |
486 |
agttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagag |
548 |
Q |
| |
|
||||||| ||||||||||||||| |||| |||||||| | ||||||||| |||||||||| |
|
|
| T |
5448703 |
tagtggccttaaaaatgtgttggtgaaaaattacacaaaggctaccattcaaatctataagag |
5448765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 459
Target Start/End: Original strand, 2938920 - 2938976
Alignment:
| Q |
403 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctat |
459 |
Q |
| |
|
|||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
2938920 |
tttgaagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctat |
2938976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 329 - 688
Target Start/End: Complemental strand, 5181132 - 5180773
Alignment:
| Q |
329 |
gtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacg |
428 |
Q |
| |
|
||||| ||| ||| |||||| |||||| || ||||||||||||| || || || |||||| ||||||| ||||||||||||| ||||||||||| |
|
|
| T |
5181132 |
gtggtggttatttcctccccagtgatagttatccaaattggttaacctttaattctgaaggttcttctgtaacttttgaagtccctttggtggaaggacg |
5181033 |
T |
|
| Q |
429 |
tagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagacc |
528 |
Q |
| |
|
|| |||||||||||||||| | |||||||| |||| ||| || || ||||| ||||||| |||| |||| || | |||| |||||||| | |
|
|
| T |
5181032 |
taacttgaagacaatgatgctcgttgtctataattcaactccacataatgtaacatcaagtggccttaaaaacatgttagttaaaaattacacaaaggct |
5180933 |
T |
|
| Q |
529 |
accattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtggagattg |
628 |
Q |
| |
|
|||||||| ||||||||||| || ||||| ||| || ||| |||| || | |||| || ||||||| || |||| ||| ||| ||||||| | | |
|
|
| T |
5180932 |
accattcagctctataagagtgatacgttagtctcttttgaagatgaagagggtcagagggtagtatcaagcatagaacccggtaacaaagtggaggtcg |
5180833 |
T |
|
| Q |
629 |
ttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatg |
688 |
Q |
| |
|
|| ||||||||| || ||||||||||||| ||||||| || ||||||| ||||||||| |
|
|
| T |
5180832 |
tttttgtttttgagaaaagtttcattgtgaagaagacagcaatttatctggtatatgatg |
5180773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 554
Target Start/End: Original strand, 5351411 - 5351562
Alignment:
| Q |
403 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatg |
502 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||| | |||| ||| | | || ||||| ||||||| |||| |
|
|
| T |
5351411 |
tttgaagttcctcaagtggaagggcgtgacttgaagacaatgatgtgcatagtctatacttcaacccctggtaacgtaacatcaagtggccttaaaaaca |
5351510 |
T |
|
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagagaggc |
554 |
Q |
| |
|
|||| |||| |||| |||||||| ||||||||| ||||||||||| ||||| |
|
|
| T |
5351511 |
tgttagtgaaaaattacacaaaggccaccattcggctctataagagtgaggc |
5351562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 695
Target Start/End: Original strand, 5427021 - 5427203
Alignment:
| Q |
513 |
aaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggt |
612 |
Q |
| |
|
|||| |||||||| ||| |||||| || |||||||| |||| ||| || || ||| ||||||| || | ||||| ||||||| ||| |||| |||| |
|
|
| T |
5427021 |
aaattacacaaaggccatcattcagctttataagagtgaggtattagtgtcatttgaagatgaggagggggaaagagtagtatcaagtatagaacctggt |
5427120 |
T |
|
| Q |
613 |
gacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaaccaat |
695 |
Q |
| |
|
||| | ||||| | ||| ||||||||| ||||||||| |||||| ||||||| |||||||||| |||||||||||||||| |
|
|
| T |
5427121 |
aacaaaatggaggtcgtttttgtttttgagaacagtttcgttgtgacgaagacagtagtttatctcgtatatgatgaaccaat |
5427203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 691
Target Start/End: Complemental strand, 23127611 - 23127306
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatc |
485 |
Q |
| |
|
|||||| ||||||| |||||||| |||||||||||||| | || | |||||||||| ||||| ||||| || | |||| |||| || ||| | || |
|
|
| T |
23127611 |
aaggttcttctgtaagttttgaagctcctcaagtggaagggcataacgtgaagacaataatgtgtgttgtcaatacttcaaccccagataacattacctc |
23127512 |
T |
|
| Q |
486 |
agttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaag |
585 |
Q |
| |
|
| |||| || |||| |||||||| | |||| |||||||| |||||||| |||||||||||||| | ||| ||| || ||| |||||||| ||||| |
|
|
| T |
23127511 |
ggatggcgttaaaaacgtgttggtaaaaaattacacaaagggtaccattcagatctataagagagagacattagtctcgttcgaagatgaggaagggaag |
23127412 |
T |
|
| Q |
586 |
agagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatg |
685 |
Q |
| |
|
|| | ||||||| | |||| |||| ||| | ||||| ||||||| ||||||| || ||||| |||||| ||| ||| |||||||||| |||||| |
|
|
| T |
23127411 |
agcttagtatcaagtgcagaacctggtaacaaaatggaggttgttgtcgtttttgagaatggtttcgttgtgaagaatacaacagtttatcttgtatatg |
23127312 |
T |
|
| Q |
686 |
atgaac |
691 |
Q |
| |
|
|||||| |
|
|
| T |
23127311 |
atgaac |
23127306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 618 - 686
Target Start/End: Original strand, 5253759 - 5253827
Alignment:
| Q |
618 |
agtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatga |
686 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||| || ||| ||||||||||||||||||| |
|
|
| T |
5253759 |
agtggagtttgttgttgtttttgagaacagtttcattgtgaagaggacgacagtttatctcatatatga |
5253827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 688
Target Start/End: Complemental strand, 5283513 - 5283223
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatc |
485 |
Q |
| |
|
|||||| ||||||| |||||| ||||||||||| ||||| ||| ||||||| |||||||||||||||||||| | |||| ||| ||| | | || |
|
|
| T |
5283513 |
aaggttcttctgtaacttttgatgtccctcaagttgaagggtgtaacttgaagtcaatgatgtgcattgtctatacttcaacccc---tggta-aaca-- |
5283420 |
T |
|
| Q |
486 |
agttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaag |
585 |
Q |
| |
|
| || || ||| ||||| |||| |||| |||||||| ||||||| ||||||||||| || || || || |||| ||| ||||||||| ||| || |
|
|
| T |
5283419 |
---tagctttagaaacgtgttagtgaaaaattacacaaaggccaccatccaactctataatagtgatgcattttcctactttgaaaatgag---tggcag |
5283326 |
T |
|
| Q |
586 |
agagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatg |
685 |
Q |
| |
|
|| || |||||| ||| |||| ||| ||| ||||||| | | ||||||||| ||||||||||||||||| ||||||| || ||||||| |||||| |
|
|
| T |
5283325 |
agggtaatatcaagtatcgaaccaggtaacaaagtggaggtcatatttgtttttgaaaacagtttcattgtgaagaagacagcaatttatctggtatatg |
5283226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 457
Target Start/End: Original strand, 5372108 - 5372162
Alignment:
| Q |
403 |
tttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtct |
457 |
Q |
| |
|
|||||||| |||||||||||||| |||| |||||||||||| ||||||| ||||| |
|
|
| T |
5372108 |
tttgaagttcctcaagtggaagggcgtaacttgaagacaattatgtgcaatgtct |
5372162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 459
Target Start/End: Complemental strand, 5256451 - 5256378
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctat |
459 |
Q |
| |
|
|||||| ||||||| |||||||||||| |||| ||||| |||| ||||| | |||||||||||||||||||| |
|
|
| T |
5256451 |
aaggttcttctgtaacttttgaagtccccgaagttgaagggcgtaacttgatgtcaatgatgtgcattgtctat |
5256378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 5426894 - 5426967
Alignment:
| Q |
386 |
aaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctat |
459 |
Q |
| |
|
|||||| ||||||| |||| |||| || ||||||||||| |||| | |||||||||| |||||||| |||||| |
|
|
| T |
5426894 |
aaggttcttctgtaacttttcaagttccacaagtggaagggcgtaacctgaagacaattatgtgcatagtctat |
5426967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 103; Significance: 8e-51; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 365 - 695
Target Start/End: Complemental strand, 36213243 - 36212913
Alignment:
| Q |
365 |
attggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatc |
464 |
Q |
| |
|
||||||||| ||||| | |||||||| ||||||| ||||||| ||||||| |||||| ||||||| ||| |||||||| ||||| ||||||||||| || |
|
|
| T |
36213243 |
attggttaaccttcaattgcaaaggttcttctgtaatttttgatgtccctcgagtggatggacgtaacttaaagacaataatgtgtattgtctattcttc |
36213144 |
T |
|
| Q |
465 |
aagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctcc |
564 |
Q |
| |
|
|| ||| | ||||||||||| ||| ||| |||| ||| |||| | ||||||||||||| | |||||||| |||||||||||||||| ||| ||| |
|
|
| T |
36213143 |
aactccagaaaacatagcatcagatggacttaaaaacgtgatggtaaaaaatcacacaaaggctaccattcagatctataagagagaggcattagtctca |
36213044 |
T |
|
| Q |
565 |
ttagaaaatgaggaatggaagagagtggtatcaaatatggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaaga |
664 |
Q |
| |
|
|| ||| ||||||| || ||||| | ||||||| ||| |||| |||||| | | ||||| ||||||||||||||| |||| ||||||||||| ||||| |
|
|
| T |
36213043 |
tttgaagatgaggaggggcagagattagtatcaagtatagaacctggtgataaaatggaggttgttgttgtttttgagaacaatttcattgtgaagaaga |
36212944 |
T |
|
| Q |
665 |
catcagtttatctcatatatgatgaaccaat |
695 |
Q |
| |
|
|| | |||||||||| |||||||||||||| |
|
|
| T |
36212943 |
cagcgatttatctcatttatgatgaaccaat |
36212913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 2087391 - 2087329
Alignment:
| Q |
99 |
agagtgatgtgataaatttgatatgttggtgatgtgataggaagagagataaagagaaaatga |
161 |
Q |
| |
|
||||| ||||||||||| |||||| ||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
2087391 |
agagtaatgtgataaatgtgatatattgttaatgtgataggaagagagataaagagaaaatga |
2087329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 18936568 - 18936616
Alignment:
| Q |
503 |
tgttggtgataaatcacacaaagaccaccattcaactctataagagaga |
551 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| |||||||||||||| |
|
|
| T |
18936568 |
tgttggtgataaattgcacaaagaacaccattcagctctataagagaga |
18936616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 36424650 - 36424734
Alignment:
| Q |
93 |
ataacaagagtgatgtgataaatttgatatgttggtgatgtgataggaagagagataaagagaaaatgaagtgttaaatgagtgt |
177 |
Q |
| |
|
||||||| ||||||||| | || |||| ||| | || ||||||||||||||| ||||||||||||| || |||||||| ||||| |
|
|
| T |
36424650 |
ataacaaaagtgatgtgtttgatatgatgtgtagttggtgtgataggaagagaaataaagagaaaataaaatgttaaataagtgt |
36424734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 302 - 687
Target Start/End: Complemental strand, 47985778 - 47985393
Alignment:
| Q |
302 |
ttttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagt |
401 |
Q |
| |
|
||||||||||| || |||| ||||| ||| | ||| ||||||||| |||||| || ||||||||||||| || || || |||||| ||| ||| |
|
|
| T |
47985778 |
ttttacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaac |
47985679 |
T |
|
| Q |
402 |
ttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaat |
501 |
Q |
| |
|
|||||||||||||||||||||| | | || ||| |||||||||||||||||||||||| | |||| | || ||| |||| |||||| ||||||| |||| |
|
|
| T |
47985678 |
ttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaac |
47985579 |
T |
|
| Q |
502 |
gtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaata |
601 |
Q |
| |
|
||||| |||||||||||||||| ||| |||||||||||||||||| ||| | ||| |||||| | | ||||||| || ||||||| ||||||| || |
|
|
| T |
47985578 |
gtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagta |
47985479 |
T |
|
| Q |
602 |
tggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgat |
687 |
Q |
| |
|
| |||| ||| ||| ||||||| | ||||||||||||| || |||||||||||| || || | |||||||||| |||||||| |
|
|
| T |
47985478 |
tagaacccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
47985393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 302 - 687
Target Start/End: Complemental strand, 48004352 - 48003967
Alignment:
| Q |
302 |
ttttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagt |
401 |
Q |
| |
|
||||||||||| || |||| ||||| ||| | ||| ||||||||| |||||| || ||||||||||||| || || || |||||| ||| ||| |
|
|
| T |
48004352 |
ttttacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaac |
48004253 |
T |
|
| Q |
402 |
ttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaat |
501 |
Q |
| |
|
|||||||||||||||||||||| | | || ||| |||||||||||||||||||||||| | |||| | || ||| |||| |||||| ||||||| |||| |
|
|
| T |
48004252 |
ttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaac |
48004153 |
T |
|
| Q |
502 |
gtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaata |
601 |
Q |
| |
|
||||| |||||||||||||||| ||| |||||||||||||||||| ||| | ||| |||||| | | ||||||| || ||||||| ||||||| || |
|
|
| T |
48004152 |
gtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagta |
48004053 |
T |
|
| Q |
602 |
tggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgat |
687 |
Q |
| |
|
| |||| ||| ||| ||||||| | ||||||||||||| || |||||||||||| || || | |||||||||| |||||||| |
|
|
| T |
48004052 |
tagaacccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
48003967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 302 - 687
Target Start/End: Complemental strand, 47995065 - 47994680
Alignment:
| Q |
302 |
ttttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagt |
401 |
Q |
| |
|
||||||||||| || |||| ||||| ||| | ||| ||||||||| |||||| || ||||||||||||| || || || |||||| ||| ||| |
|
|
| T |
47995065 |
ttttacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaac |
47994966 |
T |
|
| Q |
402 |
ttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaat |
501 |
Q |
| |
|
|||||||||||||||||||||| | | || ||| |||||||||||||||||||||||| | |||| | || ||| |||| |||||| ||||||| |||| |
|
|
| T |
47994965 |
ttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaac |
47994866 |
T |
|
| Q |
502 |
gtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaata |
601 |
Q |
| |
|
||||| |||||||||||||||| ||| |||||||||||||||||| ||| | ||| |||||| | | ||||||| || ||||||| ||||||| || |
|
|
| T |
47994865 |
gtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagta |
47994766 |
T |
|
| Q |
602 |
tggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgat |
687 |
Q |
| |
|
| ||| ||| ||| ||||||| | ||||||||||||| || |||||||||||| || || | |||||||||| |||||||| |
|
|
| T |
47994765 |
tagaatccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
47994680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 302 - 687
Target Start/End: Complemental strand, 48013637 - 48013252
Alignment:
| Q |
302 |
ttttacagaatttgactgtcgatgggcgtggtagttttttgctcccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagt |
401 |
Q |
| |
|
||||||||||| || |||| ||||| ||| | ||| ||||||||| |||||| || ||||||||||||| || || || |||||| ||| ||| |
|
|
| T |
48013637 |
ttttacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaac |
48013538 |
T |
|
| Q |
402 |
ttttgaagtccctcaagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaat |
501 |
Q |
| |
|
|||||||||||||||||||||| | | || ||| |||||||||||||||||||||||| | |||| | || ||| |||| |||||| ||||||| |||| |
|
|
| T |
48013537 |
ttttgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaac |
48013438 |
T |
|
| Q |
502 |
gtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaata |
601 |
Q |
| |
|
||||| |||||||||||||||| ||| |||||||||||||||||| ||| | ||| |||||| | | ||||||| || ||||||| ||||||| || |
|
|
| T |
48013437 |
gtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagta |
48013338 |
T |
|
| Q |
602 |
tggaacatggtgacagagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgat |
687 |
Q |
| |
|
| ||| ||| ||| ||||||| | ||||||||||||| || |||||||||||| || || | |||||||||| |||||||| |
|
|
| T |
48013337 |
tagaatccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
48013252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 9233308 - 9233222
Alignment:
| Q |
119 |
atatgttggtgatgtgataggaagagagataaagagaaaatgaagtgttaaatgagtgtttggaaaattggggtgtccaaatatcat |
205 |
Q |
| |
|
|||||||| |||||||||| |||||||||| |||| ||||||||||||| ||||||||| || ||| || |||||| ||||||||| |
|
|
| T |
9233308 |
atatgttgatgatgtgataagaagagagatgaagataaaatgaagtgttgaatgagtgtatgtaaagttagggtgttaaaatatcat |
9233222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 31062264 - 31062194
Alignment:
| Q |
89 |
agaaataacaagagtgatgtgataaatttgatatgttggtgatgtgataggaagagagataaagagaaaat |
159 |
Q |
| |
|
||||| || |||| ||||||||||||| |||||| ||||||||||||||| |||||||||| | ||||||| |
|
|
| T |
31062264 |
agaaacaaaaagaatgatgtgataaatatgatattttggtgatgtgatagaaagagagatacatagaaaat |
31062194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.000000001; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 7566378 - 7566446
Alignment:
| Q |
114 |
atttgatatgttggtgatgtgataggaagagaga--taaagagaaaatgaagtgttaaatgagtgtttg |
180 |
Q |
| |
|
|||||||| |||| |||| ||||||||||||||| || ||||||||||||||||||||| | |||||| |
|
|
| T |
7566378 |
atttgataggttgatgatatgataggaagagagagatagagagaaaatgaagtgttaaataaatgtttg |
7566446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 345 - 523
Target Start/End: Original strand, 8879482 - 8879660
Alignment:
| Q |
345 |
cccctgtgataattgcccaaattggttaagtttcaactccaaaggttattctgtagtttttgaagtccctcaagtggaaggacgtagcttgaagacaatg |
444 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||| | ||||| || |||| |||| |||| |||||||| ||||| | | ||||||| | ||| |
|
|
| T |
8879482 |
ccccggtgataattatccaaattggttaactttcagttgtgaaggtccttgtgtaacttttaaagttcctcaagttgaagggagaaacttgaagtcgatg |
8879581 |
T |
|
| Q |
445 |
atgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataaatcacacaa |
523 |
Q |
| |
|
||||||||||||||| |||||| |||| || || | ||||| ||| || ||||| ||||||| ||||||||||||| |
|
|
| T |
8879582 |
atgtgcattgtctatacatcaaccccagataacacaatatcagatggactaaaaaatatgttggttataaatcacacaa |
8879660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 12045575 - 12045617
Alignment:
| Q |
130 |
atgtgataggaagagagataaagagaaaatgaagtgttaaatg |
172 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||| |||| |
|
|
| T |
12045575 |
atgtgataggaagagagatatagagaaaatgaattgttgaatg |
12045617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 26683695 - 26683764
Alignment:
| Q |
104 |
gatgtgataaatttgatatgttggtgatgtgatagga--agagagataaagagaaaatgaagtgttaaat |
171 |
Q |
| |
|
|||||||||||| | |||| || |||||||||||||| | ||||||| |||||||||||||| |||||| |
|
|
| T |
26683695 |
gatgtgataaatcttatatattagtgatgtgataggagtaaagagatatagagaaaatgaagtattaaat |
26683764 |
T |
|
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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 10515804 - 10515864
Alignment:
| Q |
119 |
atatgttggtgatgtgataggaagaga--gataaagagaaaatgaagtgttaaatgagtgt |
177 |
Q |
| |
|
|||| ||| |||||||||||||||||| ||||||||||||||||| |||| || |||||| |
|
|
| T |
10515804 |
atatattgatgatgtgataggaagagatagataaagagaaaatgaaatgttgaacgagtgt |
10515864 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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