View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104A_low_119 (Length: 315)
Name: NF10104A_low_119
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104A_low_119 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 292
Target Start/End: Original strand, 49086299 - 49086580
Alignment:
| Q |
11 |
aatgaaggtgtttgcttgctcctaaattccatttgaagtatgaacaattttgctctctttgcaaataaataaatggtgtaaaaattgaatgtgacgtgtt |
110 |
Q |
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| T |
49086299 |
aatgaaggtgtttgcttgctcctaaattccatttgaagtatgaacaattttgctctctttgcaaataaataaatggtgtaaaaattgaatgtgacgtgtt |
49086398 |
T |
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| Q |
111 |
gtgggatctgtcgaagcatgagaaccaaacatgtgtagaactatactaagcacacataatcaatagtgagcaaaccaattttcattgaatgcagaaactg |
210 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
49086399 |
gtgggatctggcgaagcatgagaaccaaacatgtgtagaactatactaaacacacataatcaatagtgagcaaaccaattttcattgcatgcagaaactg |
49086498 |
T |
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| Q |
211 |
ttggttttataagtctataagtttatccaaatgtcggtgaaacgactcgatctaagccacgtctccttcattccattgtccc |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
49086499 |
ttggttttataagtctataagtttatccaaatgtcggtgaaacgacccgatctaagccacgtctccttcattccattgtccc |
49086580 |
T |
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