View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104A_low_132 (Length: 303)
Name: NF10104A_low_132
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104A_low_132 |
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Alignment Details
Target: chr3 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 31762691 - 31762990
Alignment:
| Q |
1 |
aaagatgatagagattcgaaggaagaattggaagacagagaaagtaaaggataattatccgcgaatgatccaataatctgagaaaatatttgatagaaga |
100 |
Q |
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| T |
31762691 |
aaagatgatagaggtttgaaggaagaattggaagacaaagaaagtaaaggataattatccgcgaatgatccaataatctgagaaaatatttgatagaaga |
31762790 |
T |
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| Q |
101 |
aaccaaaccaactcaacactgccttccatgcttgctgagttatcggtgagtacatgacaatcaacaatgttatgttataccttaaaataatttgtttaag |
200 |
Q |
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| T |
31762791 |
aaccaaaccaactcaacactgccttccatgcttgctgagttattggtgagtacatgacaatcaacaatgttatgttataccttaaaataatttgtttaag |
31762890 |
T |
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| Q |
201 |
gtttgtgatgtagcttgatgcatacgctattaaatattaacgtttgtttcactcaccttttgtttctcaatatattttgttggtttgttatgtgagagat |
300 |
Q |
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| T |
31762891 |
gtttgtgatgtagcttgatgcatacgctattaaatattaacgtttgtttcactcaccttttgtttctcaatatattttgttggtttgttatgtgagagat |
31762990 |
T |
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