View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10104A_low_190 (Length: 268)

Name: NF10104A_low_190
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10104A_low_190
NF10104A_low_190
[»] scaffold0576 (1 HSPs)
scaffold0576 (8-120)||(9498-9610)
[»] chr6 (31 HSPs)
chr6 (8-120)||(15364727-15364839)
chr6 (8-124)||(15328553-15328669)
chr6 (8-124)||(25924755-25924871)
chr6 (7-124)||(28965730-28965847)
chr6 (8-124)||(32784802-32784918)
chr6 (8-124)||(34413155-34413271)
chr6 (8-124)||(237289-237405)
chr6 (7-124)||(3660243-3660360)
chr6 (14-115)||(6435109-6435210)
chr6 (8-95)||(2881426-2881513)
chr6 (8-95)||(2862165-2862252)
chr6 (8-103)||(3339390-3339485)
chr6 (13-95)||(1803962-1804044)
chr6 (13-95)||(27334957-27335039)
chr6 (13-95)||(27395697-27395779)
chr6 (49-121)||(26668563-26668635)
chr6 (13-115)||(12441600-12441702)
chr6 (13-109)||(11017461-11017557)
chr6 (23-103)||(17835697-17835777)
chr6 (8-124)||(17902583-17902699)
chr6 (66-109)||(2886694-2886737)
chr6 (20-98)||(11635707-11635783)
chr6 (7-98)||(29376606-29376697)
chr6 (8-124)||(31368503-31368615)
chr6 (13-98)||(1688269-1688354)
chr6 (13-54)||(2689086-2689127)
chr6 (13-109)||(9954627-9954723)
chr6 (8-124)||(2056847-2056963)
chr6 (26-98)||(4923036-4923108)
chr6 (61-109)||(16533204-16533252)
chr6 (39-103)||(24437529-24437592)
[»] chr3 (51 HSPs)
chr3 (8-124)||(40478178-40478294)
chr3 (8-124)||(41877752-41877868)
chr3 (8-124)||(45295630-45295746)
chr3 (13-121)||(25542867-25542975)
chr3 (8-124)||(42718185-42718299)
chr3 (34-124)||(25142692-25142782)
chr3 (13-127)||(14992134-14992250)
chr3 (8-124)||(31007240-31007359)
chr3 (8-124)||(52453983-52454099)
chr3 (8-115)||(35756053-35756160)
chr3 (8-124)||(13159725-13159841)
chr3 (8-124)||(34021354-34021470)
chr3 (13-124)||(50879659-50879770)
chr3 (8-98)||(43900862-43900952)
chr3 (13-98)||(54233397-54233482)
chr3 (8-124)||(11327172-11327288)
chr3 (8-124)||(28263609-28263725)
chr3 (7-115)||(36819029-36819137)
chr3 (8-115)||(30400047-30400154)
chr3 (8-115)||(50279978-50280085)
chr3 (12-98)||(2009744-2009829)
chr3 (7-124)||(20714307-20714424)
chr3 (13-98)||(23906883-23906968)
chr3 (13-98)||(51717531-51717616)
chr3 (8-124)||(8254091-8254207)
chr3 (8-127)||(44855312-44855431)
chr3 (13-98)||(43441760-43441845)
chr3 (13-118)||(50652458-50652563)
chr3 (8-109)||(53102793-53102894)
chr3 (8-124)||(3957909-3958025)
chr3 (32-124)||(23163060-23163152)
chr3 (7-95)||(32931808-32931896)
chr3 (8-124)||(46344478-46344594)
chr3 (39-98)||(32687882-32687941)
chr3 (56-115)||(37303013-37303072)
chr3 (13-115)||(47056421-47056524)
chr3 (35-98)||(47484369-47484432)
chr3 (44-98)||(3483209-3483263)
chr3 (49-103)||(7949873-7949927)
chr3 (8-57)||(7039125-7039174)
chr3 (13-98)||(9027963-9028047)
chr3 (56-109)||(26279963-26280016)
chr3 (8-109)||(27162358-27162459)
chr3 (56-109)||(32457694-32457747)
chr3 (13-109)||(1208025-1208120)
chr3 (66-98)||(1765483-1765515)
chr3 (8-124)||(3069466-3069582)
chr3 (14-54)||(20080082-20080122)
chr3 (34-109)||(33007439-33007515)
chr3 (13-109)||(49130933-49131028)
chr3 (45-81)||(52678521-52678557)
[»] chr5 (41 HSPs)
chr5 (8-125)||(7077230-7077347)
chr5 (8-124)||(19271923-19272039)
chr5 (8-124)||(26685755-26685871)
chr5 (8-124)||(26955486-26955602)
chr5 (8-124)||(30574268-30574384)
chr5 (8-124)||(36548271-36548387)
chr5 (8-124)||(32634772-32634888)
chr5 (8-124)||(3263399-3263515)
chr5 (8-124)||(15622108-15622224)
chr5 (49-124)||(31006123-31006196)
chr5 (13-98)||(4292873-4292958)
chr5 (13-98)||(8959250-8959335)
chr5 (7-124)||(33823584-33823701)
chr5 (8-124)||(12417690-12417806)
chr5 (8-124)||(12512857-12512973)
chr5 (28-124)||(28501681-28501777)
chr5 (8-124)||(38010936-38011052)
chr5 (8-115)||(11464014-11464121)
chr5 (49-124)||(41192651-41192726)
chr5 (13-115)||(3154539-3154641)
chr5 (8-98)||(30776709-30776799)
chr5 (13-98)||(17489438-17489523)
chr5 (8-124)||(35972638-35972750)
chr5 (8-124)||(9596705-9596821)
chr5 (13-124)||(22920388-22920499)
chr5 (8-124)||(4954530-4954646)
chr5 (8-124)||(9594542-9594658)
chr5 (37-109)||(34381091-34381163)
chr5 (44-115)||(10522848-10522919)
chr5 (15-98)||(12401282-12401365)
chr5 (39-109)||(10232578-10232648)
chr5 (39-109)||(12661869-12661939)
chr5 (13-98)||(372616-372701)
chr5 (13-98)||(14914460-14914544)
chr5 (13-98)||(20719912-20719996)
chr5 (45-118)||(25038150-25038223)
chr5 (49-98)||(32873081-32873130)
chr5 (52-124)||(16553568-16553640)
chr5 (8-124)||(25345402-25345518)
chr5 (49-109)||(36415994-36416054)
chr5 (13-109)||(39595353-39595448)
[»] scaffold0115 (1 HSPs)
scaffold0115 (8-124)||(35384-35500)
[»] chr4 (76 HSPs)
chr4 (8-124)||(4550398-4550514)
chr4 (8-124)||(51224729-51224845)
chr4 (8-124)||(56025320-56025436)
chr4 (191-246)||(11592281-11592336)
chr4 (191-246)||(11645783-11645838)
chr4 (13-115)||(55642501-55642603)
chr4 (8-115)||(8026655-8026762)
chr4 (8-124)||(1796430-1796544)
chr4 (8-117)||(24019862-24019973)
chr4 (8-124)||(27001300-27001416)
chr4 (8-115)||(5208218-5208325)
chr4 (13-124)||(37022325-37022436)
chr4 (49-124)||(43434404-43434479)
chr4 (8-131)||(47105968-47106091)
chr4 (8-98)||(9032870-9032960)
chr4 (21-115)||(46844145-46844239)
chr4 (13-98)||(32901419-32901504)
chr4 (21-98)||(36728526-36728603)
chr4 (13-109)||(41495092-41495188)
chr4 (8-124)||(44368093-44368209)
chr4 (8-124)||(51377184-51377300)
chr4 (8-115)||(24235393-24235500)
chr4 (8-115)||(31221486-31221593)
chr4 (49-124)||(54165091-54165168)
chr4 (13-98)||(15638220-15638305)
chr4 (49-121)||(5466427-5466499)
chr4 (13-97)||(20632544-20632628)
chr4 (8-124)||(45548675-45548791)
chr4 (8-115)||(7037375-7037482)
chr4 (52-103)||(29406972-29407023)
chr4 (49-124)||(31048952-31049027)
chr4 (53-124)||(40721900-40721971)
chr4 (13-98)||(610896-610982)
chr4 (51-121)||(45923446-45923515)
chr4 (8-94)||(53384233-53384318)
chr4 (13-98)||(2193705-2193790)
chr4 (8-109)||(3223068-3223169)
chr4 (13-98)||(32365563-32365648)
chr4 (8-109)||(49424711-49424812)
chr4 (13-109)||(19910889-19910985)
chr4 (44-96)||(35580202-35580254)
chr4 (49-93)||(45176665-45176709)
chr4 (52-124)||(45779226-45779298)
chr4 (8-124)||(52669500-52669616)
chr4 (8-124)||(55267892-55268008)
chr4 (49-124)||(20956514-20956589)
chr4 (13-124)||(42177946-42178057)
chr4 (35-98)||(43358703-43358766)
chr4 (57-124)||(44170559-44170626)
chr4 (8-95)||(53662333-53662420)
chr4 (35-109)||(9162145-9162219)
chr4 (9-42)||(439294-439327)
chr4 (49-98)||(1562468-1562517)
chr4 (13-98)||(13267375-13267459)
chr4 (13-98)||(18568711-18568796)
chr4 (13-98)||(20056472-20056557)
chr4 (13-98)||(33484002-33484087)
chr4 (49-98)||(36812335-36812384)
chr4 (56-109)||(39844197-39844250)
chr4 (49-98)||(39880962-39881011)
chr4 (13-98)||(47519616-47519701)
chr4 (49-98)||(48743800-48743849)
chr4 (8-96)||(4971904-4971992)
chr4 (13-109)||(8681020-8681116)
chr4 (49-109)||(12241137-12241196)
chr4 (13-93)||(13182426-13182506)
chr4 (45-109)||(19245967-19246031)
chr4 (13-96)||(24154704-24154785)
chr4 (40-124)||(29949596-29949680)
chr4 (35-103)||(31413704-31413772)
chr4 (49-109)||(33820269-33820328)
chr4 (39-103)||(36792417-36792481)
chr4 (35-103)||(38952774-38952842)
chr4 (49-109)||(40756000-40756060)
chr4 (49-97)||(41119458-41119506)
chr4 (66-110)||(46173615-46173659)
[»] chr2 (51 HSPs)
chr2 (8-121)||(30413623-30413736)
chr2 (8-124)||(43936352-43936466)
chr2 (8-124)||(12175219-12175335)
chr2 (8-124)||(33003887-33004003)
chr2 (13-124)||(10550355-10550466)
chr2 (7-124)||(37966420-37966537)
chr2 (8-124)||(38021420-38021535)
chr2 (8-124)||(44484547-44484663)
chr2 (45-124)||(27540079-27540158)
chr2 (8-100)||(36582344-36582436)
chr2 (7-121)||(22353065-22353179)
chr2 (13-98)||(5962728-5962813)
chr2 (8-117)||(33029993-33030102)
chr2 (8-124)||(3195978-3196094)
chr2 (21-109)||(30973895-30973983)
chr2 (13-109)||(12192026-12192122)
chr2 (11-98)||(9694955-9695042)
chr2 (8-103)||(23047974-23048069)
chr2 (17-124)||(36383526-36383633)
chr2 (13-115)||(29871251-29871353)
chr2 (13-98)||(36909740-36909824)
chr2 (8-124)||(6884974-6885090)
chr2 (13-124)||(30192247-30192358)
chr2 (39-109)||(34138959-34139030)
chr2 (13-98)||(26809579-26809665)
chr2 (13-98)||(12358403-12358488)
chr2 (49-98)||(13466007-13466056)
chr2 (40-109)||(14954522-14954591)
chr2 (8-64)||(4097068-4097124)
chr2 (13-109)||(23391141-23391237)
chr2 (8-124)||(29893674-29893790)
chr2 (8-124)||(38246642-38246758)
chr2 (52-124)||(39133786-39133858)
chr2 (49-124)||(1298258-1298333)
chr2 (49-124)||(6851591-6851666)
chr2 (61-115)||(6639416-6639470)
chr2 (43-109)||(19913863-19913929)
chr2 (39-109)||(26321620-26321689)
chr2 (8-98)||(33857307-33857397)
chr2 (46-104)||(34101073-34101131)
chr2 (49-115)||(39744526-39744592)
chr2 (34-103)||(13104564-13104633)
chr2 (56-109)||(23880174-23880227)
chr2 (34-103)||(32750083-32750152)
chr2 (37-98)||(41353417-41353478)
chr2 (20-124)||(3299008-3299112)
chr2 (61-109)||(16051332-16051380)
chr2 (7-59)||(19520204-19520256)
chr2 (61-109)||(28165208-28165256)
chr2 (49-109)||(31635742-31635802)
chr2 (13-109)||(38572018-38572114)
[»] chr7 (41 HSPs)
chr7 (8-124)||(33881596-33881712)
chr7 (8-150)||(5900926-5901066)
chr7 (8-93)||(17157228-17157313)
chr7 (8-95)||(29609768-29609856)
chr7 (8-124)||(26041374-26041490)
chr7 (13-98)||(10014851-10014936)
chr7 (13-98)||(25614717-25614802)
chr7 (13-98)||(42060747-42060832)
chr7 (8-124)||(27164728-27164844)
chr7 (8-124)||(30864308-30864424)
chr7 (13-124)||(42431787-42431898)
chr7 (8-109)||(39369381-39369482)
chr7 (8-124)||(33050247-33050363)
chr7 (8-124)||(44511203-44511319)
chr7 (13-106)||(42476464-42476557)
chr7 (8-124)||(116695-116811)
chr7 (61-109)||(2469771-2469819)
chr7 (8-94)||(30402084-30402168)
chr7 (8-115)||(38978565-38978671)
chr7 (13-98)||(8742473-8742558)
chr7 (13-98)||(37385129-37385214)
chr7 (45-98)||(42640933-42640986)
chr7 (13-98)||(47530187-47530272)
chr7 (8-124)||(20406605-20406721)
chr7 (8-95)||(23330002-23330087)
chr7 (8-124)||(29162170-29162286)
chr7 (8-95)||(3344955-3345042)
chr7 (8-74)||(16645557-16645623)
chr7 (8-74)||(17619918-17619984)
chr7 (39-109)||(19426659-19426728)
chr7 (35-109)||(22331129-22331203)
chr7 (39-109)||(47424908-47424977)
chr7 (49-98)||(21037168-21037217)
chr7 (49-98)||(21153142-21153191)
chr7 (56-109)||(30862715-30862768)
chr7 (56-109)||(30982293-30982346)
chr7 (56-109)||(36990120-36990173)
chr7 (13-98)||(44894371-44894455)
chr7 (8-115)||(19880122-19880229)
chr7 (61-109)||(34348971-34349019)
chr7 (26-98)||(37325728-37325800)
[»] chr1 (44 HSPs)
chr1 (7-117)||(49189101-49189211)
chr1 (8-124)||(10385478-10385594)
chr1 (8-124)||(43195980-43196096)
chr1 (8-124)||(5383823-5383939)
chr1 (8-124)||(37669462-37669578)
chr1 (40-124)||(2257617-2257701)
chr1 (14-124)||(36669267-36669377)
chr1 (30-121)||(39669873-39669964)
chr1 (13-98)||(42843240-42843325)
chr1 (8-124)||(6829676-6829792)
chr1 (8-124)||(13813622-13813738)
chr1 (8-124)||(26501359-26501475)
chr1 (8-124)||(27578246-27578362)
chr1 (8-124)||(50035429-50035545)
chr1 (13-109)||(50777319-50777415)
chr1 (13-124)||(3291321-3291432)
chr1 (13-124)||(7371844-7371955)
chr1 (13-124)||(9011709-9011820)
chr1 (8-98)||(19920852-19920942)
chr1 (13-115)||(50797853-50797955)
chr1 (45-98)||(10302271-10302324)
chr1 (13-124)||(25130767-25130878)
chr1 (49-115)||(29362624-29362690)
chr1 (45-98)||(8670162-8670215)
chr1 (8-109)||(27895652-27895752)
chr1 (13-98)||(51193029-51193114)
chr1 (7-43)||(27563617-27563653)
chr1 (49-109)||(42615936-42615996)
chr1 (13-121)||(43457716-43457823)
chr1 (13-112)||(7078396-7078495)
chr1 (8-124)||(25995524-25995642)
chr1 (13-124)||(29489255-29489366)
chr1 (39-109)||(15061924-15061994)
chr1 (66-124)||(26585122-26585180)
chr1 (13-82)||(46902708-46902778)
chr1 (44-97)||(366748-366801)
chr1 (46-107)||(4618725-4618786)
chr1 (52-121)||(27563551-27563620)
chr1 (67-124)||(51704737-51704794)
chr1 (45-81)||(3606024-3606060)
chr1 (47-115)||(8905801-8905869)
chr1 (8-44)||(24749633-24749669)
chr1 (34-110)||(25302562-25302638)
chr1 (13-109)||(40610308-40610403)
[»] chr8 (54 HSPs)
chr8 (8-100)||(11089664-11089757)
chr8 (8-124)||(43587705-43587821)
chr8 (8-124)||(34972131-34972245)
chr8 (8-124)||(38504234-38504350)
chr8 (6-120)||(23952562-23952675)
chr8 (8-124)||(43602314-43602430)
chr8 (7-124)||(41293612-41293728)
chr8 (8-124)||(30927822-30927938)
chr8 (8-98)||(6105326-6105416)
chr8 (7-109)||(6825167-6825269)
chr8 (13-98)||(11138986-11139071)
chr8 (8-124)||(1065481-1065597)
chr8 (13-97)||(30129500-30129584)
chr8 (8-124)||(41273579-41273695)
chr8 (49-124)||(29509330-29509405)
chr8 (7-98)||(33817247-33817338)
chr8 (8-115)||(39258946-39259053)
chr8 (13-103)||(2597056-2597146)
chr8 (13-98)||(5925145-5925230)
chr8 (8-124)||(19723097-19723213)
chr8 (13-109)||(37562037-37562133)
chr8 (57-115)||(6849408-6849466)
chr8 (39-109)||(11879412-11879482)
chr8 (39-109)||(11896828-11896898)
chr8 (8-126)||(14531683-14531801)
chr8 (13-115)||(36064103-36064205)
chr8 (13-115)||(36497734-36497836)
chr8 (13-98)||(43186386-43186469)
chr8 (13-98)||(5924900-5924985)
chr8 (13-98)||(34765746-34765831)
chr8 (44-109)||(37033029-37033093)
chr8 (45-98)||(39153612-39153665)
chr8 (32-124)||(13884380-13884472)
chr8 (39-115)||(30925577-30925652)
chr8 (8-124)||(40211638-40211754)
chr8 (49-109)||(40719576-40719636)
chr8 (8-95)||(14228786-14228873)
chr8 (7-98)||(35595300-35595391)
chr8 (37-95)||(41519951-41520010)
chr8 (45-108)||(44086440-44086503)
chr8 (13-103)||(7129618-7129707)
chr8 (13-114)||(8888326-8888428)
chr8 (35-109)||(22836057-22836131)
chr8 (14-115)||(6656236-6656337)
chr8 (14-115)||(6736638-6736739)
chr8 (13-54)||(12783774-12783815)
chr8 (56-109)||(28473484-28473537)
chr8 (49-98)||(30608642-30608691)
chr8 (8-109)||(36593677-36593778)
chr8 (66-115)||(39027557-39027606)
chr8 (13-53)||(9208074-9208114)
chr8 (61-121)||(11114613-11114673)
chr8 (34-110)||(22767208-22767284)
chr8 (61-109)||(40102102-40102150)
[»] scaffold0172 (1 HSPs)
scaffold0172 (8-124)||(17039-17155)
[»] scaffold0514 (1 HSPs)
scaffold0514 (8-109)||(1387-1488)
[»] scaffold0085 (1 HSPs)
scaffold0085 (8-124)||(31191-31307)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-124)||(147147-147263)
[»] scaffold0522 (1 HSPs)
scaffold0522 (8-109)||(2395-2496)
[»] scaffold0119 (1 HSPs)
scaffold0119 (49-121)||(2158-2230)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-121)||(5146-5254)
[»] scaffold0121 (1 HSPs)
scaffold0121 (8-118)||(29852-29963)
[»] scaffold0054 (1 HSPs)
scaffold0054 (35-109)||(31518-31592)
[»] scaffold0004 (1 HSPs)
scaffold0004 (8-98)||(249033-249123)
[»] scaffold0193 (1 HSPs)
scaffold0193 (13-98)||(24763-24848)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-109)||(18674-18774)
[»] scaffold0049 (1 HSPs)
scaffold0049 (13-98)||(72067-72152)


Alignment Details
Target: scaffold0576 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 9610 - 9498
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||    
T  9610 caatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaaaggaagaga 9511  T
Q  108 gaagataataaca 120  Q
    || ||||||||||    
T  9510 gaggataataaca 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 15364839 - 15364727
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||    
T  15364839 caatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaaaggaagaga 15364740  T
Q  108 gaagataataaca 120  Q
    || ||||||||||    
T  15364739 gaggataataaca 15364727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 15328669 - 15328553
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||| | |    
T  15328669 caatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaagaaa 15328570  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  15328569 gaggataataacatcat 15328553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 25924755 - 25924871
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||| |||    
T  25924755 caatgatatttgtacattcatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaagaga 25924854  T
Q  108 gaagataataacatcat 124  Q
    |   |||||||||||||    
T  25924855 gcgaataataacatcat 25924871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 28965730 - 28965847
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||| ||||| |||| ||||||||||  ||| ||    
T  28965730 acaatgatatatgtacatccatttaatgacaactttggtgataactttgtttctctctcttttgattggtcaaaaacaatgaagagagaaaaaagaagag 28965829  T
Q  107 agaagataataacatcat 124  Q
    |||| ||||||| |||||    
T  28965830 agaatataataatatcat 28965847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 32784918 - 32784802
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||| |||||  ||||||||||||||||||||| || |||||||| |||| |||||||| || |||||||||||||| |||||| |||| |||    
T  32784918 caatgatatttctacatttatttaatgacaattttggtgacaattttgtttttctctcttttgattagtcaaaaataatggagaaagaaaaaggaagaga 32784819  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  32784818 gaggataataacatcat 32784802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 34413271 - 34413155
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||||| |||  ||| ||||||||||| ||||| ||||| ||||||||| |||| |||    
T  34413271 caatgatatttgtacatcaatttaatgacaattttggtgacaactttgattttttctcttttgattggtcaaaaacaatggggagagaaaaaggaagaga 34413172  T
Q  108 gaagataataacatcat 124  Q
    ||  |||| ||||||||    
T  34413171 gagaataacaacatcat 34413155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 237289 - 237405
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||| ||||| |||||||||||| ||| |||| | ||||||||| |||| || | |||||| ||||||||||||||||||||| |||  |||    
T  237289 caatgatatttggacatctatttaatgacaacttttgtgacatctttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggatgaga 237388  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  237389 gacgataagaacatcat 237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 3660243 - 3660360
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||| ||||||||||  ||| ||    
T  3660243 acaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatgcagagagaaaaaagaagag 3660342  T
Q  107 agaagataataacatcat 124  Q
    ||||||||| | ||||||    
T  3660343 agaagataagaccatcat 3660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 6435210 - 6435109
Alignment:
Q  14 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 113  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||| |||| || | |||||| ||||| |||||| |||||||| | || |||||||||    
T  6435210 tatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatggatagagaaaaagtaagagagaagat 6435111  T
Q  114 aa 115  Q
    ||    
T  6435110 aa 6435109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 2881513 - 2881426
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||| ||||||| |||||||||||||||||| |||||||| ||||||||||  |||| || | |||||| ||||||||| ||||||||    
T  2881513 caatgatatttggacatccatttaatgacaactttggtgacaactttgtttctctctcttcttattggtcaaaaataatagagagaga 2881426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 2862252 - 2862165
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||| ||||||| |||||||||||||||||| |||||||| || |||||||  |||| || | |||||| ||||||||| ||||||||    
T  2862252 caatgatatttggacatccatttaatgacaactttggtgacaattttgtttctctcttttcttattggtcaaaaataatagagagaga 2862165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 3339390 - 3339485
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||  ||||||| |||| |||| |||||| ||||| ||| ||||||||||| ||||    
T  3339390 caatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctctctttttattggtcaaaaacaatagagagagaaaaaggaa 3339485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 1804044 - 1803962
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||    
T  1804044 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagaga 1803962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 27335039 - 27334957
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| |||| |||||| ||||||||| ||||||||    
T  27335039 atatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataatagagagaga 27334957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 27395779 - 27395697
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| |||| |||||| ||||||||| ||||||||    
T  27395779 atatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataatagagagaga 27395697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 26668635 - 26668563
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 121  Q
    |||||||||||||||| ||||||||| | |||||||||  | |||||||| |||| ||||| |||||||||||    
T  26668635 aactttgttttcctctcttttgattgatcaaaaataataaaaagagaaaaaggaagagagaggataataacat 26668563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 12441702 - 12441600
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||| | || ||||||| |||||||| ||| ||| ||| |||| || | || ||| ||||| ||||||||||||||| | || ||||||||    
T  12441702 atatttgtacatctaattgatgacaactttggtgacaaccttgcttttctctcttcttatcggttaaaaacaatggagagagaaaaagtaagagagaaga 12441603  T
Q  113 taa 115  Q
    |||    
T  12441602 taa 12441600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 11017557 - 11017461
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||||||||||||  || |||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||||||||||| |||| |||||    
T  11017557 atatttgtacatccattccataacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaaaagaga 11017461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 17835777 - 17835697
Alignment:
Q  23 atccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||||||||| ||||| |||  ||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  17835777 atccatttaaggacaactttaatgacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaa 17835697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 17902583 - 17902699
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  ||||||| ||| |||||||  ||||||| |||| || | |||||| ||||| |||||||||| ||||  ||| |||    
T  17902583 caatgatatttgtacatctattccatgacaactttagtgataatattgtttttctctcttcttattggtcaaaaacaatggagagataaaaaagaagaga 17902682  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  17902683 gaggataagaccatcat 17902699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 2886737 - 2886694
Alignment:
Q  66 ttttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||    
T  2886737 ttttcattggtaaaaaacaatggagagagaaaaaggaatagaga 2886694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 11635783 - 11635707
Alignment:
Q  20 tacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| | |||||||||| ||| |||| ||||||  | | |||| |||||| |||||||||||||||||||||    
T  11635783 tacatccatttgaagacaattttgatgacaactctgtttt--tttttttttattggtcaaaaataatggagagagaaaa 11635707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 29376606 - 29376697
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||| ||||||||||||| ||||| ||||||||||| ||| |||  |||||| |||| || | |||||| | ||| |||||||| ||||||    
T  29376606 acaatgatatttgtacatctatttagtgacaattttgatgacaaccatgttttgctctcttcttattggttataaacaatggagaaagaaaa 29376697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 31368503 - 31368615
Alignment:
Q  8 caataatatttgtacatccattta---atgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 104  Q
    |||| |||||||||||||||||||   ||||||| |||||||| ||||||||||       |||| |||||||||||| ||| || ||||||||  |||     
T  31368503 caatgatatttgtacatccatttatgaatgacaactttggtgacaactttgttt-------tttttattggtaaaaaacaatagatagagaaaaatgaag 31368595  T
Q  105 agagaagataataacatcat 124  Q
    ||| | ||||||||||||||    
T  31368596 agataggataataacatcat 31368615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 1688269 - 1688354
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| ||| ||||||  |||||||| |  ||| |||||  ||||||||| |||| |||||| ||||| |||||||||||||||    
T  1688269 atatttgaacaaccattttttgacaattatcttgacaacttctttttcctctctttttattggttaaaaacaatggagagagaaaa 1688354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 2689127 - 2689086
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataacttt 54  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  2689127 atatttgaacatccatttaatgacaatttttgtgacaacttt 2689086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 9954723 - 9954627
Alignment:
Q  13 atatttgtacatccatttaatgacaa-ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| ||| ||||||||| |||| ||||||||| |||||  | || |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  9954723 atatttgaacaaccatttaat-acaacttttggtgacaacttcttctttctctcttttcattggttaaaaacaatggagagagaaaacggaagagaga 9954627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 2056963 - 2056847
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||  ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| |||||| ||||||||  ||| |||    
T  2056963 caatgatatttgtacattcattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggatagagaaaaaagaagaga 2056864  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  2056863 gaggataagaccatcat 2056847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 4923108 - 4923036
Alignment:
Q  26 catttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||| ||||||| |||  |||||| |||||||| |||| || | |||||| ||||||||| |||||||||||    
T  4923108 catttgatgacaacttttatgataattttgtttttctctcttcttattggttaaaaataattgagagagaaaa 4923036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 16533204 - 16533252
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  16533204 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 16533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 24437592 - 24437529
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    ||||| ||| |||||| ||||||||| |||| |||||| ||||| ||||||||||||||| ||||    
T  24437592 ttttgatgacaacttt-ttttcctctttttttattggttaaaaacaatggagagagaaaaaggaa 24437529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 40478178 - 40478294
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||| |||    
T  40478178 caatgatatttgtacatccatttaatgacaattttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaagaga 40478277  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  40478278 gaggataataacatcat 40478294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 41877868 - 41877752
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||| ||||||||||||||| |||| |||    
T  41877868 caatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaacaatggagagagaaaaaggaagaga 41877769  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  41877768 gaggataataacatcat 41877752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 45295630 - 45295746
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||| |||    
T  45295630 caatgatatttgtacatccatttaatgacagctttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgtagagagaaaaaggaagaga 45295729  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  45295730 gaggataataacatcat 45295746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 25542867 - 25542975
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| |||||||| ||||||||||| ||||| |||| |||||||||| |||| ||||| ||    
T  25542867 atatttgtacatccatttaatgataactttagtgacaactttggtttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaagagagagga 25542966  T
Q  113 taataacat 121  Q
    |||||||||    
T  25542967 taataacat 25542975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 42718299 - 42718185
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||| ||||||| |||||||||||||||||||||| ||||||||||  |||| ||||||||||| ||||| |||| ||||||||||  ||| |||    
T  42718299 caatgatatatgtacattcatttaatgacaattttggtgacaactttgttt--ctctcttttgattggtcaaaaacaatgaagagagaaaaaagaaaaga 42718202  T
Q  108 gaagataataacatcat 124  Q
    ||| |||||||||||||    
T  42718201 gaatataataacatcat 42718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 25142782 - 25142692
Alignment:
Q  34 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||| ||||||||| ||||||||||||||| |||| |||||| ||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  25142782 gacaactttggtgattactttgttttcctctcttttaattggtcaaaaacaatggagagagaaaaaggaagagagaggataataacatcat 25142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 14992250 - 14992134
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataat--ggagagagaaaagggaatagagaa 110  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||  ||| ||||||||||| ||| | |||   ||||||||| | |||| |||||     
T  14992250 atatttgtacatccatttaatgacaactttggtgacaactttgttttattcttttttgattggtcaaacacaataaagagagagaacaaggaaaagagag 14992151  T
Q  111 gataataacatcatctg 127  Q
    |||||||||||||||||    
T  14992150 gataataacatcatctg 14992134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 31007240 - 31007359
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgat---aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 104  Q
    |||| |||||||||||| |||||||||| || ||||||| |   |||||||||||||||| ||||||||||| ||||| |||| | |||||||| ||||     
T  31007240 caatcatatttgtacattcatttaatgataactttggtggtgacaactttgttttcctctcttttgattggttaaaaacaatgaaaagagaaaaaggaag 31007339  T
Q  105 agagaagataataacatcat 124  Q
    ||||| ||||||||||||||    
T  31007340 agagaggataataacatcat 31007359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 52453983 - 52454099
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||||||||||  |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  52453983 caatgatatttgtacatccatttcatgacaactttagtgacaactttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 52454082  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  52454083 gaggataagaccatcat 52454099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 35756160 - 35756053
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||| ||||||| |||||||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||  ||| |||    
T  35756160 caatcatatttgtacatctatttcatgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaatgaagaga 35756061  T
Q  108 gaagataa 115  Q
    || |||||    
T  35756060 gatgataa 35756053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 13159841 - 13159725
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  13159841 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 13159742  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  13159741 gacgataagaccatcat 13159725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 34021354 - 34021470
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||| ||||||||||| |||| |||    
T  34021354 caatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatagagagagaaaaaggaagaga 34021453  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  34021454 gaggataagaccatcat 34021470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 50879770 - 50879659
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||||||||||||||||  ||||||| ||| |||| ||||||||| | |||| || | |||||| ||| | ||||||||||||||| |||| ||||||||    
T  50879770 atatttgtacatccattccatgacaactttagtgacaactttgttgttctctcttcttattggtcaaacacaatggagagagaaaaaggaagagagaaga 50879671  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  50879670 taagaccatcat 50879659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 43900952 - 43900862
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||  |||||||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| |||||||||||||||||||||    
T  43900952 caatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaataatggagagagaaaa 43900862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 54233397 - 54233482
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  54233397 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 54233482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 11327288 - 11327172
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||| ||||||||||| |||| |||    
T  11327288 caatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagagagaaaaaggaagaga 11327189  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  11327188 gaggataagaccatcat 11327172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 28263725 - 28263609
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||| ||||||||| ||||||| ||| |||| |||||| |||| || | || | |||||| ||||| ||||||||||||||| |||| |||    
T  28263725 caatgatatttgttcatccatttcatgacaactttagtgacaactttatttttctttcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 28263626  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  28263625 gaggataagaccatcat 28263609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 36819137 - 36819029
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  ||| ||    
T  36819137 acaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaagag 36819038  T
Q  107 agaagataa 115  Q
    ||| |||||    
T  36819037 agaggataa 36819029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 30400047 - 30400154
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  30400047 caattatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 30400146  T
Q  108 gaagataa 115  Q
    || |||||    
T  30400147 gaggataa 30400154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 50279978 - 50280085
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| |||| |||    
T  50279978 caatgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaagaga 50280077  T
Q  108 gaagataa 115  Q
    || |||||    
T  50280078 gaggataa 50280085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 2009829 - 2009744
Alignment:
Q  12 aatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||||||||||| ||||| |||||| |||||||| ||| ||| ||| |||| || | |||||| |||||||||||||||||||||    
T  2009829 aatatttgtacatcaattta-tgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaataatggagagagaaaa 2009744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 20714424 - 20714307
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||||||||||||||||  |||| |||||| |||| ||| || |||| || | || | |||||| ||||| ||||||||||||||| |||| ||    
T  20714424 acaatgatatttgtacatccattccatgataattttagtgacaaccttatttttctatcttcttattggtcaaaaacaatggagagagaaaaaggaagag 20714325  T
Q  107 agaagataataacatcat 124  Q
    ||| ||||| | ||||||    
T  20714324 agaggataagaccatcat 20714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 23906883 - 23906968
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| |||| || | |||||| ||||| |||||||||||||||    
T  23906883 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaatggagagagaaaa 23906968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 51717616 - 51717531
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| |||| || |  |||||||||||||||||||||| ||||    
T  51717616 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttgttggtaaaaaataatggagagaaaaaa 51717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 8254207 - 8254091
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||||||| |||| ||| || |||  |||| || | || ||  ||||| ||||||||||||||| |||| |||    
T  8254207 caatgatatttgtacatccatttcatgacaattttagtgacaacattatttctctctcttcttatcggctaaaaacaatggagagagaaaaaggaagaga 8254108  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  8254107 gatgataagaccatcat 8254091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 44855431 - 44855312
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||| ||||||| ||| |||| ||  || |||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  44855431 caatgatatttgtacatcaatttcatgacaactttagtgacaatcttatttttctctcttcttattggttaaaaaaaatggagagagaaaaaggaagaga 44855332  T
Q  108 gaagataataacatcatctg 127  Q
     | ||||| |||||| ||||    
T  44855331 aatgataagaacatcgtctg 44855312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 43441845 - 43441760
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| ||||  || ||| ||  ||| |||| |||| |||||| |||||||||||||||||||||    
T  43441845 atatttgtacatccaattgatgacaactttgacgacaaccttacttttctctttttttattggtcaaaaataatggagagagaaaa 43441760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 50652563 - 50652458
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||  | || |||||||||||| ||| || |||| ||| |||| || | |||||| ||||| ||||||||||| ||| |||| ||||| ||    
T  50652563 atatttgtacatttaattgatgacaattttgatgacaattttgcttttctctcttcttattggtcaaaaacaatggagagagtaaaaggaagagagagga 50652464  T
Q  113 taataa 118  Q
    ||||||    
T  50652463 taataa 50652458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 53102793 - 53102894
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||| | ||||| |||||||||| |||| |||| |||    
T  53102793 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagagaaaaaaaggaagaga 53102892  T
Q  108 ga 109  Q
    ||    
T  53102893 ga 53102894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 3957909 - 3958025
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  | ||||| ||| |||| ||| ||||||| || | || | ||| || ||||| ||||||||||||||| |||| |||    
T  3957909 caatgatatttgtacatccattccaggacaactttagtgacaaccttgtttttctatcttcttatttgtcaaaaacaatggagagagaaaaaggaagaga 3958008  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  3958009 gaggataagaccatcat 3958025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 23163060 - 23163152
Alignment:
Q  32 atgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||||||| |||| || |||||||| |||| || | |||||| ||||| |||| |||||||||| |||| ||||| ||||| | ||||||    
T  23163060 atgacaattttagtgacaattttgtttttctcttttcttattggtcaaaaagaatgaagagagaaaaaggaagagagaggataagaccatcat 23163152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 32931808 - 32931896
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    ||||| |||||||||||||||||| |  |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||    
T  32931808 acaatgatatttgtacatccatttcacaacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagaga 32931896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 46344594 - 46344478
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||| | ||||| ||| |||| ||| || |||| || | || | |||||| |||||||||||||| |||||| |||| |||    
T  46344594 caatgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaaataatggagaaagaaaaaggaagaga 46344495  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  46344494 gaggataagaccatcat 46344478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 32687882 - 32687941
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||||||||||||  |||| |||| |||| |||||| ||||| |||||||||||||||    
T  32687882 ttttggtgataacttcttttttctctcttttcattggttaaaaacaatggagagagaaaa 32687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 37303013 - 37303072
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||| ||||    
T  37303013 tttttctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagagaaaataa 37303072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 47056421 - 47056524
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggt-aaaaaataatggagagagaaaagggaatagagaag 111  Q
    ||||||||||||||| || |||||||||||| ||| ||| ||  ||| |||| |||  |||||| |||||  ||| ||||||||||| |||| |||||||    
T  47056421 atatttgtacatccagttgatgacaattttgatgacaaccttacttttctctctttctattggtcaaaaaccaattgagagagaaaaaggaagagagaag 47056520  T
Q  112 ataa 115  Q
    ||||    
T  47056521 ataa 47056524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 47484432 - 47484369
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||||| | |||||||||||| | |||| |||| |||||| ||||| |||||||||||||||    
T  47484432 acaatttttgggataactttgttgtgctctcttttcattggtcaaaaacaatggagagagaaaa 47484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 3483263 - 3483209
Alignment:
Q  44 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| |||||| |||| |||| |||| |||| |||||||||||||||||||||||    
T  3483263 gtgacaactttttttttctctcttttcattgataaaaaataatggagagagaaaa 3483209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 7949927 - 7949873
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||||| |||| |||| ||||||||||| ||||| ||||||||||||||| ||||    
T  7949927 aactttatttttctctcttttgattggttaaaaaaaatggagagagaaaaaggaa 7949873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 7039125 - 7039174
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgtt 57  Q
    |||| |||||||||| ||||||| ||||||||||| |||||||| |||||    
T  7039125 caatgatatttgtacttccatttcatgacaattttagtgataaccttgtt 7039174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 9028047 - 9027963
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| ||| |||||| || || ||||| |||| ||||| ||||  ||||||||| |||||| ||||| |||||||||||||||    
T  9028047 atatttgaacaaccatttgat-acgatttttgtgacaacttcgtttctctctatttttattggtcaaaaacaatggagagagaaaa 9027963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 26280016 - 26279963
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  26280016 ttttcctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 26279963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 27162358 - 27162459
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||| ||||| |||||| |||||| |||  ||| ||||||  ||| || | |||| |||||| |||||||||||||||| |||| |||| |||    
T  27162358 caatgatatttctacattcatttattgacaactttattgacaactttacttttctatctttttattggttaaaaataatggagagaaaaaaaggaagaga 27162457  T
Q  108 ga 109  Q
    ||    
T  27162458 ga 27162459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 32457694 - 32457747
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  32457694 tttttctctcttttcattggttaaaaataatggagagagaaaaaggaagagaga 32457747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 1208120 - 1208025
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||||||||| || ||| ||| |||||||| ||||||| ||| |||| || | |||  ||||||| ||||||| ||||||| |||| |||||    
T  1208120 atatttgtacatccaattgatgtcaactttggtgacaactttgattttctctcttcttattaataaaaaacaatggag-gagaaaaaggaaaagaga 1208025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 1765515 - 1765483
Alignment:
Q  66 ttttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||||||||||||||||||||||||    
T  1765515 ttttcattggtaaaaaataatggagagagaaaa 1765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 3069466 - 3069582
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||| |||||||||  ||||||| ||| |||  ||  ||||||| |||| || | |||||| ||||| |||||||||||| || |||| |||    
T  3069466 caatgatatttgcacatccattccatgacaactttagtgggaatcttgtttttctctcttcttattggtcaaaaacaatggagagagataaaggaagaga 3069565  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  3069566 gaggataagaccatcat 3069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 20080082 - 20080122
Alignment:
Q  14 tatttgtacatccatttaatgacaattttggtgataacttt 54  Q
    |||||| |||||||||||||||||||||| |||| ||||||    
T  20080082 tatttgaacatccatttaatgacaatttttgtgacaacttt 20080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 33007515 - 33007439
Alignment:
Q  34 gacaattttggtgataactt-tgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||| ||||| | |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  33007515 gacaatttttgtgacaacttctttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 33007439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 49131028 - 49130933
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| |||||||||| | ||||||||| |||| |||||  |||  |||| |||| ||| || ||||| ||||||||||||||| |||| |||||    
T  49131028 atatttgaacatccatttga-gacaatttttgtgacaacttcttttctctctcttttcattagtcaaaaacaatggagagagaaaaaggaagagaga 49130933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 52678521 - 52678557
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaa 81  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  52678521 tgataactttgtttttctctattttgattggttaaaa 52678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 7077230 - 7077347
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||     
T  7077230 caatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaaataatggagagagaaaaaggaagagt 7077329  T
Q  108 gaagataataacatcatc 125  Q
    || ||||| |||||||||    
T  7077330 gaggataacaacatcatc 7077347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 19272039 - 19271923
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  ||||||||||| |||||||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  19272039 caatgatatttgtacatctattatatgacaattttagtgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 19271940  T
Q  108 gaagataataacatcat 124  Q
     | ||||| ||||||||    
T  19271939 aaggataagaacatcat 19271923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 26685871 - 26685755
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| ||||||||| || |||||| | || ||||||||||||| ||||||| | | ||||| |||| | |||||||| |||| |||    
T  26685871 caatgatatttgtacatctatttaatgataactttggtcacaattttgttttcctctcttttgatcgattaaaaacaatgaaaagagaaaaaggaagaga 26685772  T
Q  108 gaagataataacatcat 124  Q
    |||||||||||||||||    
T  26685771 gaagataataacatcat 26685755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 26955602 - 26955486
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| ||||||||| || |||||| | || ||||||||||||| ||||||| | | ||||| |||| | |||||||| |||| |||    
T  26955602 caatgatatttgtacatctatttaatgataactttggtcacaattttgttttcctctcttttgatcgattaaaaacaatgaaaagagaaaaaggaagaga 26955503  T
Q  108 gaagataataacatcat 124  Q
    |||||||||||||||||    
T  26955502 gaagataataacatcat 26955486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 30574268 - 30574384
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  30574268 caatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 30574367  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  30574368 gatgataagaccatcat 30574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 36548271 - 36548387
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||| ||||||||| |||| ||| ||| ||||||| ||||||||| |||| |  |||| ||||||||||||||| |||| |||    
T  36548271 caatgatatttgtacatccatctaatgacaactttgatgacaaccttgtttttctctatttttattgattgaaaacaatggagagagaaaaaggaagaga 36548370  T
Q  108 gaagataataacatcat 124  Q
    || ||||||| ||||||    
T  36548371 gaggataatagcatcat 36548387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 32634888 - 32634772
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||||||| ||||||| |||||||| |||| || | |||||||||||| | |||||||||||||  ||| |||    
T  32634888 caatgatatttgtacatccattccatgacaattttagtgataattttgtttttctcttttcttattggtaaaaaacattggagagagaaaaatgaaaaga 32634789  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  32634788 gaggataagaccatcat 32634772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 3263399 - 3263515
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| | || |||    
T  3263399 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaagaaagaga 3263498  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  3263499 gaggataagaccatcat 3263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 15622224 - 15622108
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  15622224 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 15622125  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  15622124 gaggataagaccatcat 15622108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 31006196 - 31006123
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||| |||| ||||| ||||||||||||||    
T  31006196 aactttgttttcctctattttgattggtcaaaaataatg--aagagaaaaaggaagagagaggataataacatcat 31006123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 4292958 - 4292873
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| |||| ||||| |||||||||||| ||| ||||||||||| ||||||| | |||||| ||||| || ||||||||||||    
T  4292958 atatttggacattcatttgatgacaattttgttgacaactttgtttttctctattcttattggtcaaaaacaacggagagagaaaa 4292873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 8959335 - 8959250
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| ||||| || ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  8959335 atatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 8959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 33823584 - 33823701
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | || ||    
T  33823584 acaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagag 33823683  T
Q  107 agaagataataacatcat 124  Q
    ||| ||||| | ||||||    
T  33823684 agaggataagaccatcat 33823701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 12417806 - 12417690
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||| | ||||| |||||||| |||||||| || |||| || |  ||||| ||||| |||||||||||||||  ||||| |    
T  12417806 caatgatatttgtacatctatttcacgacaactttggtgacaactttgtgtttctctcttctttttggttaaaaacaatggagagagaaaaatgaataca 12417707  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  12417706 gaggataacaacatcat 12417690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 12512973 - 12512857
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  12512973 caatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 12512874  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  12512873 gaggataagaccatcat 12512857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 28501777 - 28501681
Alignment:
Q  28 tttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||| |||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||    
T  28501777 tttagtgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagagagatgataagaacatcat 28501681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 38011052 - 38010936
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  ||||||||||| |||| || ||||||||  ||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  38011052 caatgatatttgtacatctattccatgacaattttagtgacaattttgtttttttctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 38010953  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  38010952 gaggataagaccatcat 38010936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 11464014 - 11464121
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  || |||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||  ||| |||    
T  11464014 caatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatggagagagaaaaatgaagaga 11464113  T
Q  108 gaagataa 115  Q
    || |||||    
T  11464114 gatgataa 11464121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 41192726 - 41192651
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||||||| |||| ||||||||||| ||||| ||||||||||||||| |||| || || ||||| ||||||||    
T  41192726 aactttgtttttctctcttttgattggtcaaaaacaatggagagagaaaaaggaagagtgaggataacaacatcat 41192651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 3154539 - 3154641
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||  | || |||||||||||||||| |||||| |||| |||| |||| ||| || ||||| |||||||||||||||  ||| ||||| ||    
T  3154539 atatttgtacatttaattgatgacaattttggtgacaactttatttttctctctttttattagttaaaaaaaatggagagagaaaaatgaagagagatga 3154638  T
Q  113 taa 115  Q
    |||    
T  3154639 taa 3154641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 30776799 - 30776709
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||||||||  |||| ||||||| ||| |||| || |||||||  |||| |||| ||||||||||||||||||||||| ||||    
T  30776799 caatgatatttgtacatttatttcatgacaaatttagtgacaaatttgtttctctctctttttattggtaaaaaataatggagagaaaaaa 30776709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 17489523 - 17489438
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  17489523 atatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 17489438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 35972750 - 35972638
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| ||||| ||| ||||||||||| ||| || |||| |||| |||| |||| | ||||||||||||||||||||| | || |||    
T  35972750 caatcatatttgtacatcaatttattgataattttggtgacaaccttatttt-ctctctttttattgat-aaaaataatggagagagaaaaagcaagaga 35972653  T
Q  108 gaagataataacatcat 124  Q
    ||  |||||||||||||    
T  35972652 ga--ataataacatcat 35972638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 9596705 - 9596821
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  9596705 caatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 9596804  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  9596805 gaggataagaccatcat 9596821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 22920388 - 22920499
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||| |||  ||||||| | | |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  ||| ||||| ||    
T  22920388 atatttgtacatctattacatgacaactatagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaagagagatga 22920487  T
Q  113 taataacatcat 124  Q
    ||| ||||||||    
T  22920488 taagaacatcat 22920499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 4954646 - 4954530
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||| ||||||||||  || |||| ||| |||| ||| ||||||| |||| || | || ||| ||||| ||||||||||||||| |||| |||    
T  4954646 caatgatatttctacatccattctataacaactttagtgacaaccttgtttttctctcttcttatgggtcaaaaacaatggagagagaaaaaggaagaga 4954547  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  4954546 gaggataagaccatcat 4954530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 9594658 - 9594542
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| || |||  |||| || | |||||| ||||| ||||||||||||||| | || |||    
T  9594658 caatgatatttgtacatccattccatgacaactttagtgacaaccttatttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaagaga 9594559  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  9594558 gaggataagaccatcat 9594542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 34381163 - 34381091
Alignment:
Q  37 aattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||| |||| ||||| ||||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  34381163 aatttttgtgacaacttcgtttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 34381091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 10522919 - 10522848
Alignment:
Q  44 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| |||| ||||| |||||    
T  10522919 gtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagagagaggataa 10522848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 12401365 - 12401282
Alignment:
Q  15 atttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||||||||||||| ||||||| ||| |||| ||| || |||| |||| || | |||||| ||||| |||||||| ||||||    
T  12401365 atttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatggagacagaaaa 12401282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 10232648 - 10232578
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||||  |||| |||| |||| |||||| |||| |||||||||||||||| |||| |||||    
T  10232648 ttttggtgacaacttcttttttctctcttttcattggttaaaattaatggagagagaaaaaggaagagaga 10232578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 12661869 - 12661939
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||||  |||| |||| |||| |||||| |||| |||||||||||||||| |||| |||||    
T  12661869 ttttggtgacaacttcttttttctctcttttcattggttaaaattaatggagagagaaaaaggaagagaga 12661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 372616 - 372701
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || |||| ||||||||||| ||| ||| ||| || | |||| ||| || ||||| |||| ||||||||||    
T  372616 atatttgtacatccaattgatgataattttggtgacaaccttgcttttctatctttttattagtcaaaaacaatgaagagagaaaa 372701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 14914544 - 14914460
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||||||||||||||| || | || |||| ||| |||||||||||  ||| || | |||||| ||||| |||||||||||||||    
T  14914544 atatttgtacatccatttcat-ataactttgatgacaactttgtttttatctcttcttattggtcaaaaacaatggagagagaaaa 14914460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 20719912 - 20719996
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| |||||||||| | ||||| ||| |||| |||||  |||  |||| |||| |||||| |||||||||||||||||||||    
T  20719912 atatttgaacatccatttga-gacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaataatggagagagaaaa 20719996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 25038223 - 25038150
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataa 118  Q
    ||||||||||  |||  ||| ||||||||||| ||||||||| ||||||||||| |||| |||||  |||||||    
T  25038223 tgataactttagttttatctcttttgattggttaaaaataatagagagagaaaaaggaagagagagaataataa 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 32873081 - 32873130
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  32873081 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 32873130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 16553640 - 16553568
Alignment:
Q  52 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||||  ||| ||||||||| | ||||| ||||||||||||||| |||| ||| || |||| ||||||||    
T  16553640 tttgtttttatctcttttgattgatcaaaaacaatggagagagaaaaaggaagagaaaatataacaacatcat 16553568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 25345518 - 25345402
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  || |||||||| |||| ||  || |||| |||| || | |||||| ||||| |||  |||||||||| |||| |||    
T  25345518 caatgatatttgtacatccattccataacaattttagtgacaatcttatttttctctcttcttattggtcaaaaacaataaagagagaaaaaggaagaga 25345419  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  25345418 gatgataagaccatcat 25345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 36415994 - 36416054
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| ||| |||| ||||||||||| ||||||| | ||||||||||| |||| |||||    
T  36415994 aactttggttttctctcttttgattggtcaaaaatactagagagagaaaaaggaagagaga 36416054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 39595448 - 39595353
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| ||| |||||| || |||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  39595448 atatttgaacaaccatttgat-acaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 39595353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 35384 - 35500
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||||||||||||||||| || || ||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||    
T  35384 caatgatatttgtacatctatttaatgacaattttggagaaaattttgttttcctctcttttgattggtcaaaaataatggagagagaaaaaggaagaga 35483  T
Q  108 gaagataataacatcat 124  Q
    ||  |||||||||||||    
T  35484 gagaataataacatcat 35500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 4550514 - 4550398
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||| ||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| ||||||||||||||| |||| |||    
T  4550514 caatgatatttatacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaagaga 4550415  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  4550414 gaggataataacatcat 4550398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 51224729 - 51224845
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| |||| |||||||||| | || |||    
T  51224729 caatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaagaaagaga 51224828  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  51224829 gaggataataacatcat 51224845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 56025436 - 56025320
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||||||||||| |||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||||||||| |||| |||    
T  56025436 caatgatatttgtacattcatttaatgacaactttggtgacaactttgattttctctcttttgattggtcaaaaacaatggagagagaaaaaggaacaga 56025337  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  56025336 gaggataacaacatcat 56025320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 11592281 - 11592336
Alignment:
Q  191 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaaca 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11592281 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaaca 11592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 11645838 - 11645783
Alignment:
Q  191 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaaca 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645838 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaaca 11645783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 55642501 - 55642603
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||||| ||||||| || |||||||| ||| ||| |||  ||| |||| |||||||||||||||||||||||||||| |||| ||||| ||    
T  55642501 atatttgtacatccaattaatgataactttggtgacaaccttgcttttatctctttttattggtaaaaaataatggagagagaaaaaggaagagagagga 55642600  T
Q  113 taa 115  Q
    |||    
T  55642601 taa 55642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 8026655 - 8026762
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  8026655 caatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 8026754  T
Q  108 gaagataa 115  Q
    || |||||    
T  8026755 gaggataa 8026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 1796544 - 1796430
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| | ||||||||| |||| || | |||||| ||||||||||||||||||||| |||| |||    
T  1796544 caatgatatttgtacatccattccatgacaactttagtgaca-ctttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagaga 1796446  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  1796445 gaggataa-aacatcat 1796430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 24019862 - 24019973
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatg--gagagagaaaagggaata 105  Q
    |||| ||||||||||||| |||||||||||| |||||||| ||| ||||||  |||| ||||||||||| ||||| | ||  ||||||||||| |||| |    
T  24019862 caatgatatttgtacatctatttaatgacaactttggtgacaaccttgtttctctctcttttgattggtcaaaaacattggagagagagaaaaaggaaga 24019961  T
Q  106 gagaagataata 117  Q
    |||| |||||||    
T  24019962 gagaggataata 24019973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 27001300 - 27001416
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  27001300 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 27001399  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  27001400 gaggataagaccatcat 27001416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 5208218 - 5208325
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  5208218 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 5208317  T
Q  108 gaagataa 115  Q
    || |||||    
T  5208318 gaggataa 5208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 37022436 - 37022325
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||||||||||||||||| ||||||| ||| |||||||  ||||||| || | |||| |||||| ||||| |||||||||| |||| |||| ||||| ||    
T  37022436 atatttgtacatccatttcatgacaactttagtgataatcttgtttttctttttttttattggtcaaaaacaatggagagataaaaaggaagagagatga 37022337  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  37022336 taagaccatcat 37022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 43434479 - 43434404
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||||||||| | ||||||||||| ||||| |||||| |||||||| |||| |||||| |||||||||||||    
T  43434479 aactttgttttcctatcttttgattggtcaaaaacaatggacagagaaaaaggaagagagaaaataataacatcat 43434404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 47106091 - 47105968
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | || |||    
T  47106091 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagaga 47105992  T
Q  108 gaagataataacatcatctgtgta 131  Q
    || ||||| | |||||| ||||||    
T  47105991 gaggataagaccatcatgtgtgta 47105968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 9032960 - 9032870
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| |||||||||||||||||| || |||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  9032960 caatgatatttgtacatccatttcattacaactttagtgacaaccttgtttttctctttttttattggtcaaaaacaatggagagagaaaa 9032870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 46844145 - 46844239
Alignment:
Q  21 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    ||||| |||||| ||||| |||||||| ||||||||||| |||| |||| |||||| ||||| |||||||||||||||  ||| |||||| ||||    
T  46844145 acatctatttaaggacaactttggtgacaactttgtttttctctctttttattggttaaaaacaatggagagagaaaaaagaagagagaaaataa 46844239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 32901504 - 32901419
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || |||| ||||||||||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  32901504 atatttgtacatccaattgatgataattttggtgacaatcttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 32901419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 36728526 - 36728603
Alignment:
Q  21 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| || ||||||| |||||||| ||||||||||| |||| || | |||||||||||| |||||||||||||||    
T  36728526 acatccaattgatgacaactttggtgacaactttgtttttctctcttcttattggtaaaaaacaatggagagagaaaa 36728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 41495188 - 41495092
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| ||| | || |||| ||||||||||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||||    
T  41495188 atatttgtatatctaattgatgataattttggtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagaga 41495092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 44368093 - 44368209
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||| || |||| |||| || | ||| || ||||| ||||||||||||||| |||| |||    
T  44368093 caatgatatttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaagaga 44368192  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  44368193 gatgataagaccatcat 44368209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 51377184 - 51377300
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||   |||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  51377184 caatgatatttgtacatccattccttgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 51377283  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  51377284 gaggataagaccatcat 51377300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 24235500 - 24235393
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| || |||  ||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  24235500 caatgatatttgtacatccatttcatgacaactttagtgacaattttaattttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 24235401  T
Q  108 gaagataa 115  Q
    || |||||    
T  24235400 gaggataa 24235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 31221593 - 31221486
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  ||||||||||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  31221593 caatgatatttgtacatcaattccatgacaattttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 31221494  T
Q  108 gaagataa 115  Q
    || |||||    
T  31221493 gaggataa 31221486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 54165091 - 54165168
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga--atagagaagataataacatcat 124  Q
    |||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||  | ||||| ||||||||||||||    
T  54165091 aactttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaagagagagaggataataacatcat 54165168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 15638305 - 15638220
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||  ||||| |||||||||||||||    
T  15638305 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggacaaaaacaatggagagagaaaa 15638220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 5466427 - 5466499
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 121  Q
    |||||| ||||| |||||||  |||||| ||||||||| ||||||||||| ||||||||||| |||| |||||    
T  5466427 aactttattttcttctatttctattggttaaaaataatagagagagaaaaaggaatagagaaaataaaaacat 5466499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 20632544 - 20632628
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 97  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||||  ||| ||   |||||| ||||| ||||||||||||||    
T  20632544 atatttgtacatccaattgatgacaattttggtgacaactttatttttttctcttcctattggtcaaaaacaatggagagagaaa 20632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 45548675 - 45548791
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| || ||||||||| ||| ||||  || |||||||  |||||||| ||||||  |||| ||| |||||| |||| |||| |||    
T  45548675 caatgatatttgtacatctatctaatgacaactttagtgacgaccttgtttttttctatttttattggttgaaaacaatagagagacaaaaaggaagaga 45548774  T
Q  108 gaagataataacatcat 124  Q
    || |||||| |||||||    
T  45548775 gaggataatgacatcat 45548791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 7037375 - 7037482
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  ||||||| ||| | || ||| ||||||| |||  || | |||||| ||||| ||||||||||||||| |||| |||    
T  7037375 caattatatttgtacatctattccatgacaactttagggacaaccttgtttttctcccttcttattggtcaaaaacaatggagagagaaaaaggaagaga 7037474  T
Q  108 gaagataa 115  Q
    ||||||||    
T  7037475 gaagataa 7037482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 29406972 - 29407023
Alignment:
Q  52 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  29406972 tttggttttctctattttgattggtaaaaaataatagagagagaaaaaggaa 29407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 31049027 - 31048952
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||||||| |||| ||||||||| | ||||| ||||||||||||||| | || ||||| |||||||| |||||    
T  31049027 aactttgtttttctctcttttgattgatcaaaaacaatggagagagaaaaagaaagagagaggataataatatcat 31048952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 40721900 - 40721971
Alignment:
Q  53 ttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||| |||| |||| |||||| ||||||||||||||||||||| |||| ||||| || || ||||||||    
T  40721900 ttgtttttctctttttttattggtcaaaaataatggagagagaaaaaggaagagagaggaaaagaacatcat 40721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 610982 - 610896
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataa-ctttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||| || ||| ||||||||| |||||||| || |||  ||||  ||| |||| ||||||||||||||||||||||||||||    
T  610982 atatttgtatattcatctaatgacaactttggtgacaatcttattttttttctctttttattggtaaaaaataatggagagagaaaa 610896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 45923515 - 45923446
Alignment:
Q  51 ctttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 121  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||| | || |||||  ||||||||||    
T  45923515 ctttgttttccttt-ttttgattggtcaaaaataatggagagagaaaaagaaagagagagaataataacat 45923446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 53384233 - 53384318
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag 94  Q
    ||||||||||||||||||||||| |||| || ||| |||| || |||||||| |||| || | |||||| ||||| |||||||||||    
T  53384233 caataatatttgtacatccattttatgataactttagtgacaa-tttgtttttctctcttcttattggtcaaaaacaatggagagag 53384318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 2193705 - 2193790
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||| ||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  2193705 atatttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 2193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 3223169 - 3223068
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  |||| || ||| |||| ||| || |||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  3223169 caatgatatttgtacatccattccatgaaaactttagtgacaaccttctttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 3223070  T
Q  108 ga 109  Q
    ||    
T  3223069 ga 3223068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 32365563 - 32365648
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| |||||||| |||| |||| || |||| ||||||| || |||| |||| |||| |||||| ||||| |||||||||||||||    
T  32365563 atatatgtacatctattttatgataactttgatgataacattatttttctctctttttattggtcaaaaacaatggagagagaaaa 32365648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 49424711 - 49424812
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||  |||| ||||||| ||||  ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  49424711 caatgatattttgacattcatttaaggacagctttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaagaga 49424810  T
Q  108 ga 109  Q
    ||    
T  49424811 ga 49424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 19910985 - 19910889
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| |||| ||||| |||| || |||| |||| |  || |||| || |||||| |||||| ||||||||||||||||||||| |||| |||||    
T  19910985 atatttggacattcatttgatgataactttgttgattatcttatttttctttatttttattggtcaaaaataatggagagagaaaaaggaagagaga 19910889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 35580254 - 35580202
Alignment:
Q  44 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 96  Q
    |||| |||||| ||||||||| |||| |||||| |||||||||||||||||||    
T  35580254 gtgacaacttttttttcctctcttttcattggtcaaaaataatggagagagaa 35580202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 45176665 - 45176709
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagaga 93  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||    
T  45176665 aactttgttttcctctcttttgattggtcaaaaacaatggagaga 45176709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 45779226 - 45779298
Alignment:
Q  52 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||  |||| ||||||||||| ||||| ||||||||||||||| | || |||||  |||||||||||||    
T  45779226 tttgtttctctctcttttgattggtcaaaaacaatggagagagaaaaagaaagagagagaataataacatcat 45779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 52669500 - 52669616
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||| | ||| |||| ||  ||||||| |||| |||| |||||| | ||| |||||| || ||||| |||| | |    
T  52669500 caatgatatttgtacatccattttatgaccactttagtgacaatcttgtttttctctctttttattggtcagaaacaatggaaagggaaaaaggaagata 52669599  T
Q  108 gaagataataacatcat 124  Q
    |||||||| | ||||||    
T  52669600 gaagataagaccatcat 52669616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 55267892 - 55268008
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||| | |||  || |||| ||| |||||||| ||||||| |||| || | |||||| ||||  ||||||||||||||| |||| |||    
T  55267892 caatgatatttgtacacctattccataacaactttagtgataaccttgtttttctctcttcttattggtcaaaagcaatggagagagaaaaaggaagaga 55267991  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  55267992 gaggataagatcatcat 55268008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 20956514 - 20956589
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||||||| |||| ||||||||||| ||||| |||| |||||||||| | || ||| |  |||||||||||||    
T  20956514 aactttgtttttctctcttttgattggtcaaaaacaatgaagagagaaaaagaaagagaaagaataataacatcat 20956589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 42177946 - 42178057
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||| || || || |||| || |||||| | ||||||||||| |||| || | |||||| ||||||||| |||| |||||| |||| |||||| |    
T  42177946 atatttgtatattcaattgatgataactttggtaacaactttgtttttctctcttcttattggttaaaaataatagagatagaaaaaggaaaagagaaaa 42178045  T
Q  113 taataacatcat 124  Q
    ||| || |||||    
T  42178046 taaaaatatcat 42178057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 43358766 - 43358703
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||  ||| ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  43358766 acaatttttatgacaactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 43358703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 44170559 - 44170626
Alignment:
Q  57 tttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||| ||||||||| | ||||| ||| || |||||||| |||| ||||| ||||||||||||||    
T  44170559 tttcctctcttttgattgatcaaaaacaattgacagagaaaaaggaagagagaggataataacatcat 44170626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 53662333 - 53662420
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||| |||| ||||||||||||| ||||||| ||| ||||||| |||||||| |||| || | ||| || ||||| |||| |||||||    
T  53662333 caatgatatatgtacatccatttcatgacaactttagtgataattttgtttttctctcttcttattagtcaaaaacaatgaagagaga 53662420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 9162219 - 9162145
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  9162219 acaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 9162145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 439327 - 439294
Alignment:
Q  9 aataatatttgtacatccatttaatgacaatttt 42  Q
    ||||||||||| ||||||||||||||||||||||    
T  439327 aataatatttgaacatccatttaatgacaatttt 439294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 1562468 - 1562517
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  1562468 aactttggttttctcttttttgattggtcaaaaataatagagagagaaaa 1562517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 13267375 - 13267459
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||| ||| |||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  13267375 atatttgtaaatcgatttcat-acaactttgatgaaaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 13267459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 18568711 - 18568796
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| || | || | |||||| ||||| |||| ||||||||||    
T  18568711 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattggtcaaaaacaatgaagagagaaaa 18568796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 20056557 - 20056472
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||  ||| ||| |||| || | |||||| ||||| ||| |||||||||||    
T  20056557 atatttgtacatccaattgatgacaactttggtgacaatcttgcttttctctcttcttattggtcaaaaacaattgagagagaaaa 20056472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 33484002 - 33484087
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||  ||| |||| || | |||| | ||||| |||||||||||||||    
T  33484002 atatttgtacatccaattgatgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaatggagagagaaaa 33484087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 36812335 - 36812384
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  36812335 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 36812384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 39844197 - 39844250
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||| |||||| ||||| ||||||||||||||| ||||||||||    
T  39844197 tttttctctctttttattggtcaaaaacaatggagagagaaaaaggaatagaga 39844250  T

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Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 39880962 - 39881011
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  39880962 aactttggttttctctcttttgattggtcaaaaataatagagagagaaaa 39881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 47519616 - 47519701
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||||| ||||| || || | ||| ||| ||||||| || | || | ||| || |||||||||||||||||||||    
T  47519616 atatttgtacatccattgaatgataacttagttgacaaccttgtttttctttcttcttattagttaaaaataatggagagagaaaa 47519701  T

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Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 48743849 - 48743800
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  48743849 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 48743800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 4971904 - 4971992
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 96  Q
    |||| ||||||||| ||  ||||||||| ||||||  ||||||||||||||| |  | ||||||||||| ||||| |||| | ||||||    
T  4971904 caatgatatttgtatatgtatttaatgataattttaatgataactttgtttttcatttttttgattggtcaaaaacaatgaaaagagaa 4971992  T

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Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 8681116 - 8681020
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| |||   || || | |||| | ||||| ||||||||||||||| |||| |||||    
T  8681116 atatttgtacatccaattgatgacaactttggtgacaaccttgctttttcctcttcttattgatcaaaaacaatggagagagaaaaaggaagagaga 8681020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 12241196 - 12241137
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||| |||| |||| |||||||||||| |||||||| ||||||||||| |||| |||||    
T  12241196 aactttatttttctctcttttgattggta-aaaataatagagagagaaaaaggaaaagaga 12241137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 13182506 - 13182426
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 93  Q
    ||||||||||||| | || ||||||| |||| ||||||  ||||||| |||| |||| |||||| ||||| ||| ||||||    
T  13182506 atatttgtacatcaaattgatgacaactttgatgataatcttgtttttctctttttttattggttaaaaacaatagagaga 13182426  T

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Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 19246031 - 19245967
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||||  ||||||||| |||  |||||| |||||||||||| |||||||| |||| |||||    
T  19246031 tgataacttccttttcctctctttctattggtcaaaaataatggaaagagaaaaaggaagagaga 19245967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 24154785 - 24154704
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 96  Q
    ||||||||||||| ||||||||| ||||||| ||| |||| | ||||  ||| ||||  ||||| ||||| |||||||||||||    
T  24154785 atatttgtacatctatttaatgataattttgatgacaactatatttt--tctttttttgttggtcaaaaacaatggagagagaa 24154704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 29949596 - 29949680
Alignment:
Q  40 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||| ||| |||||| |||| |||| || | |||||||||||| ||| || |||||||| |||| ||||| ||||| ||||||||    
T  29949596 tttgatgacaactttctttttctctcttcttattggtaaaaaacaatagatagagaaaaaggaagagagaggataagaacatcat 29949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 31413704 - 31413772
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||| ||| |||| ||| ||||| | |||| |||| |||||| ||||||||||||||||||||| ||||    
T  31413704 acaagttttgtgacaaccttgttgtgctctctttttattggtcaaaaataatggagagagaaaaaggaa 31413772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 33820269 - 33820328
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||| |||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  33820269 aactttatttttctctcttttgattggt-aaaaataatagagagagaaaaaggaaaagaga 33820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 36792481 - 36792417
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    ||||||||| |||||  |||  |||| |||| |||||| ||||||||||||||||||||| ||||    
T  36792481 ttttggtgacaacttcttttctctctcttttcattggttaaaaataatggagagagaaaaaggaa 36792417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 38952842 - 38952774
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||||||| ||||||| ||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  38952842 acaatttttgtgataatttcttttttctcttttttcattggtcaaaaacaatggagagagaaaaaggaa 38952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 40756060 - 40756000
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| ||| ||||  |||||||||| ||||||||| ||||||||||| |||| |||||    
T  40756060 aactttgattttctcttctttgattggtcaaaaataatagagagagaaaaaggaagagaga 40756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 41119458 - 41119506
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaa 97  Q
    |||||| ||||||||| |||| |||||| ||||| ||||||||||||||    
T  41119458 aacttttttttcctctcttttcattggtcaaaaacaatggagagagaaa 41119506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 46173659 - 46173615
Alignment:
Q  66 ttttgattggtaaaaaataatggagagagaaaagggaatagagaa 110  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||    
T  46173659 ttttcattggtaaaaaacaatggagagagaaaaaggaagagagaa 46173615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 30413623 - 30413736
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||||||||| |||| |||    
T  30413623 caatgatatttgtacatccatttaatgacaattttggtgacaactttgcttttctctcttttgattggtcaaaaacaatggagagagaaaaaggaagaga 30413722  T
Q  108 gaagataataacat 121  Q
    || ||||| |||||    
T  30413723 gaggataacaacat 30413736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 43936352 - 43936466
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| ||||||| |||||||||||||||| |||||||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||    
T  43936352 caatgatatttgtacatc-atttaatcacaattttggtgataattttgtttttctctttttttattggtcaaaaacaatggagagagaaaa-ggaagaga 43936449  T
Q  108 gaagataataacatcat 124  Q
    |||||||||||||||||    
T  43936450 gaagataataacatcat 43936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 12175219 - 12175335
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||  ||||||||| || |||||||| |||||||||||||||| ||||||||||| ||||| |||| ||||| |||| |||| |||    
T  12175219 caatgatatttgtacatttatttaatgataactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgaagagaaaaaaaggaagaga 12175318  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  12175319 gaggataataacatcat 12175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 33004003 - 33003887
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||| ||||||||||| |||||||||||| || ||||||||| |||| |||| ||||||| ||||||||||| ||| |||| |||    
T  33004003 caatgatatttgtacatccttttaatgacaactttggtgataacctttttttcctctgtttttattgataaaaaacaatggagagaggaaaaggaaaaga 33003904  T
Q  108 gaagataataacatcat 124  Q
    ||  |||||||||||||    
T  33003903 gagaataataacatcat 33003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 10550355 - 10550466
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||| |||||||||| ||||||| |||| ||| ||||||||||| ||||||||| |||||| ||||| ||||||||||||||| |||| ||||| ||    
T  10550355 atatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtcaaaaacaatggagagagaaaaaggaagagagagga 10550454  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  10550455 taagagcatcat 10550466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 37966537 - 37966420
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||||||| ||    
T  37966537 acaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagag 37966438  T
Q  107 agaagataataacatcat 124  Q
    ||| ||||| | ||||||    
T  37966437 agaggataagaccatcat 37966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 38021535 - 38021420
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| ||||||||| || |||||||| || |||||||  |||| ||||||||||| ||||| ||||||||||||||| |||| |||    
T  38021535 caatgatatttgtacatc-atttaatgataactttggtgacaattttgtttctctctcttttgattggtcaaaaacaatggagagagaaaaaggaagaga 38021437  T
Q  108 gaagataataacatcat 124  Q
    ||  |||||||||||||    
T  38021436 gagaataataacatcat 38021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 44484547 - 44484663
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||| ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  44484547 caatgatatttgtacatcaattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 44484646  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  44484647 gatgataagaacatcat 44484663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 27540158 - 27540079
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||||||||||| |||| ||||| ||||||||||||||    
T  27540158 tgataactttgttttcctcttttttgattggtcaaaaacattggagagagaaaaaggaagagagaggataataacatcat 27540079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 36582436 - 36582344
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 100  Q
    |||| |||||||||||||||||| ||||||| |||||||| ||| ||||||| ||||||| | |||||| ||||| |||| ||||||||||||    
T  36582436 caatgatatttgtacatccatttgatgacaactttggtgacaaccttgtttttctctattctaattggtcaaaaacaatgaagagagaaaagg 36582344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 22353065 - 22353179
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||| || |||| || | ||||||  |||| |||| | |||||||| |||| ||    
T  22353065 acaatgatatttgtacatccatttaatgataattttggtgataaccttgtatttctctcttcttattggtcgaaaacaatgaaaagagaaaaaggaagag 22353164  T
Q  107 agaagataataacat 121  Q
    ||| ||||| |||||    
T  22353165 agaggataacaacat 22353179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 5962813 - 5962728
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| | || |||| ||||||||||||||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  5962813 atatttgtacatctaattgatgataattttggtgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 5962728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 33029993 - 33030102
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| || ||||||||| |||| ||| ||| ||||||| ||||||||| ||||||  |||| ||||||||||||||| |||| |||    
T  33029993 caatgatatttgtacatctatctaatgacaactttgatgacaaccttgtttttctctatttttattggttgaaaacaatggagagagaaaaaggaagaga 33030092  T
Q  108 gaagataata 117  Q
     | |||||||    
T  33030093 aaggataata 33030102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 3195978 - 3196094
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| || | ||| ||||||| |||| || | |||||| ||||||||||||||||||||| |||| |||    
T  3195978 caatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagaga 3196077  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  3196078 gatgataagatcatcat 3196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 30973895 - 30973983
Alignment:
Q  21 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||||| | |||||||||| ||||||||||||||| |||  |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  30973895 acatccatttgaagacaattttgatgataactttgtttttctcactttttattggtcaaaaacaatggagagagaaaaaggaagagaga 30973983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 12192122 - 12192026
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||||||||| || || | || |||||||| ||| ||| ||| ||||||||| |||||| ||||| ||||||||||||||| |||| |||||    
T  12192122 atatttgtacatccaattgataataactttggtgacaaccttgcttttctctatttttattggtcaaaaacaatggagagagaaaaaggaagagaga 12192026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 9694955 - 9695042
Alignment:
Q  11 taatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| ||||| || ||||||| |||||||| ||| ||| ||| ||||||||| || ||| |||||||||| ||||||||||    
T  9694955 taatatttgtaaatccaattgatgacaactttggtgacaaccttgcttttctctatttttatcggtcaaaaataatgaagagagaaaa 9695042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 23047974 - 23048069
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  23047974 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 23048069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 36383633 - 36383526
Alignment:
Q  17 ttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataat 116  Q
    ||||||||| |||| || |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| ||||| |||||     
T  36383633 ttgtacatcaatttcataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagatgataag 36383534  T
Q  117 aacatcat 124  Q
    ||||||||    
T  36383533 aacatcat 36383526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 29871251 - 29871353
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||||||| |||| |||| ||||||| |||||||| ||||||||||  |||| || | |||||| ||||| |||||||||||||||  ||| ||||| ||    
T  29871251 atatttgtccatctatttcatgacaactttggtgacaactttgtttctctctcttcttattggttaaaaacaatggagagagaaaaaagaagagagagga 29871350  T
Q  113 taa 115  Q
    |||    
T  29871351 taa 29871353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 36909740 - 36909824
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||||||||||||||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  36909740 atatttgtacatccatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 36909824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 6885090 - 6884974
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||| ||||||| ||| |||| ||||||||||| |||| || | ||| || ||||| |||||||| ||||||  ||| |||    
T  6885090 caatgatatttgtacattcatttcatgacaactttagtgacaactttgtttttctctcttcttattagtcaaaaacaatggagatagaaaaaagaagaga 6884991  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  6884990 gaggataagaccatcat 6884974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 30192247 - 30192358
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||||| || |||| ||||| |  || ||| ||| ||| |||| |||| |||||||||||| |||||||| ||||||  ||||||||| ||    
T  30192247 atatttgtacatccaattgatgataatttggacgaaaaccttgcttttctctttttttattggtaaaaaacaatggagaaagaaaaatgaatagagagga 30192346  T
Q  113 taataacatcat 124  Q
    ||| || |||||    
T  30192347 taaaaatatcat 30192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 34138959 - 34139030
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattgg-taaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||| || |||||| |||||||||||||| ||||| ||||||| ||||||||||||||| ||||| ||||    
T  34138959 ttttggcgacaacttttttttcctctattttcattggttaaaaaacaatggagagagaaaaaggaattgaga 34139030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 26809665 - 26809579
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttg-ttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| || || |||||||||||||||||| |||| ||||| | | |||  |||||| ||||| |||||||||||||||    
T  26809665 atatttgtacatctatatagtgacaattttggtgataattttgattttcttatttttctattggttaaaaacaatggagagagaaaa 26809579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 12358488 - 12358403
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| || | |||| |||||| ||||| |||| ||||||||||    
T  12358488 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatctttttattggtcaaaaacaatgaagagagaaaa 12358403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 13466007 - 13466056
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| |||||||||||||||| |||| |||| |||||||||||    
T  13466007 aactttgtttttctctattttgattggtcaaaattaatagagagagaaaa 13466056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 14954522 - 14954591
Alignment:
Q  40 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| ||| ||| ||||||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  14954522 tttgatgacaaccttgtttttctcttttttaattggtaaaaaacaatggagagagaaaaaggaagagaga 14954591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 4097124 - 4097068
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctct 64  Q
    |||| |||||||| |||||||||||| ||||||||||||| ||| ||||||| ||||    
T  4097124 caatgatatttgtccatccatttaataacaattttggtgacaaccttgtttttctct 4097068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 23391237 - 23391141
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||||||||||||  |||| || ||| | || ||||||||||| |||| || | |||| | |||||||||||||| |||||| |||| |||||    
T  23391237 atatttgtacatccattccatgataactttagcgacaactttgtttttctctcttcttattgatcaaaaataatggagaaagaaaaaggaagagaga 23391141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 29893790 - 29893674
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||| |||||||  |||| || ||| |||| || |||||||| |||| || | |||| | ||||| ||||||||||||||| |||| |||    
T  29893790 caatgatatttgtatatccattctatgataagtttagtgacaattttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaagaga 29893691  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  29893690 gaggataagaccatcat 29893674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 38246642 - 38246758
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||| ||||||| |||| |||    
T  38246642 caatgatatttgtacatcaattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggagggagaaaaaggaagaga 38246741  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  38246742 gaggataagaccatcat 38246758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 39133858 - 39133786
Alignment:
Q  52 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||| |||| |||| |||||| ||||||||||||||||||||| | || | |||| |||| ||||||||    
T  39133858 tttgtttttctctttttttattggttaaaaataatggagagagaaaaagtaagaaagaaaataacaacatcat 39133786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 1298333 - 1298258
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||| ||||||||| ||||||||||| ||||| |||| ||| ||||||  ||| ||||  ||||||||||||||    
T  1298333 aactttattttcctctcttttgattggtcaaaaacaatgaagaaagaaaaaagaagagaggggataataacatcat 1298258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 6851591 - 6851666
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||||||| |||| ||||||||||| ||||| ||| |||||||||||  ||| |||||  |||| ||||||||    
T  6851591 aactttgtttttctctcttttgattggtcaaaaacaattgagagagaaaaatgaagagagagaataacaacatcat 6851666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 6639416 - 6639470
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||| ||||    
T  6639416 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagagaaaataa 6639470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 19913929 - 19913863
Alignment:
Q  43 ggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||| |||||| |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  19913929 ggtgacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaagagaga 19913863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 26321620 - 26321689
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||||||||||| ||||| ||| |||| |||||| ||||| ||| ||||||||||| |||| |||||    
T  26321620 ttttggtgataacttttttttc-tctcttttcattggttaaaaacaattgagagagaaaaaggaagagaga 26321689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 33857397 - 33857307
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||  ||||| |||||| ||||| |||||||| |||||| |||| || | || | |||||| ||||| |||||||||||||||    
T  33857397 caatgatattttgacatctatttaaggacaactttggtgacaactttatttttctgtcttcttattggtcaaaaacaatggagagagaaaa 33857307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 34101131 - 34101073
Alignment:
Q  46 gataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 104  Q
    |||||||||  ||||||||||||| |||||| ||||||||| |||||| |||| |||||    
T  34101131 gataactttcatttcctctatttttattggtcaaaaataatagagagaaaaaaaggaat 34101073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 39744526 - 39744592
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    ||||||||||| |||||||||||||||| ||||  ||| ||||||||||| || | |||||| ||||    
T  39744526 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaaaggtagagagaaaataa 39744592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 13104633 - 13104564
Alignment:
Q  34 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    ||||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  13104633 gacaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaa 13104564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 23880227 - 23880174
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  23880227 tttttctctcttttcattggtaaaaaaaaatggagagagaaaaaggaagagaga 23880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 32750152 - 32750083
Alignment:
Q  34 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    ||||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  32750152 gacaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaa 32750083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 41353417 - 41353478
Alignment:
Q  37 aattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||| |||| |||||  |||| |||| |||| |||||| |||||||||||||||||||||    
T  41353417 aatttttgtgacaacttcttttttctctttttttattggttaaaaataatggagagagaaaa 41353478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 3299008 - 3299112
Alignment:
Q  20 tacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataac 119  Q
    |||||| ||||||||| ||||||||||| ||  || |||  |||| || | |||||| ||||| ||||||||||||||| | || ||||| |||||  ||    
T  3299008 tacatctatttaatgataattttggtgacaatcttatttctctctcttcttattggttaaaaacaatggagagagaaaaagtaagagagaggataacgac 3299107  T
Q  120 atcat 124  Q
    |||||    
T  3299108 atcat 3299112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 16051332 - 16051380
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  16051332 ctcttttttgattggtcaaaaataatagagagagaaaaaggaagagaga 16051380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 19520256 - 19520204
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgtttt 59  Q
    ||||| ||||||||||||| ||||||| |||| |||| |||||| ||||||||    
T  19520256 acaatgatatttgtacatcaatttaataacaactttgatgataattttgtttt 19520204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 28165256 - 28165208
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  28165256 ctctctttttattggtcaaaaataatggagagagaaaaaggaagagaga 28165208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 31635742 - 31635802
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| ||| ||||  |||||||||| ||||||||| ||||||||||| |||| |||||    
T  31635742 aactttgattttctcttctttgattggtcaaaaataatagagagagaaaaaggaagagaga 31635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 38572114 - 38572018
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||||||| || || || |||| |||||||| ||| ||||||| |||| || | |||||| ||| | |||||||||||| ||  |||||||||    
T  38572114 atatttgtacattcaattgataacaactttggtgacaaccttgtttttctctcttcttattggtcaaagacaatggagagagagaaatgaatagaga 38572018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 33881596 - 33881712
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |||  | |||||||| |||| |||    
T  33881596 caatgatatttgtacattcatttaatgataattttggtgacaactttgttttcctctcttttgattggtaaaaaacaataaaaagagaaaaaggaagaga 33881695  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  33881696 gaggataataacatcat 33881712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 5901066 - 5900926
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||| ||||||| ||| |||||||  || |||| |||| || | ||| |||||||||||||||||||||||| | || |||    
T  5901066 caatgatatttgtacatcaatttcatgacaactttagtgataatcttatttttctcttttgttattagtaaaaaataatggagagagaaaaagaaagaga 5900967  T
Q  108 gaagataataacatcatctgtgtacaaatatcatttctcaatt 150  Q
    || ||||| |||||||  |||||||||||||||||||||||||    
T  5900966 gatgataagaacatca--tgtgtacaaatatcatttctcaatt 5900926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 17157313 - 17157228
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 93  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||||||    
T  17157313 caatgatatttgtacatcaatttaatgacaactttggtgataactttgcttttctctcttttgattggtcaaaaacaatggagaga 17157228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 29609768 - 29609856
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggt-aaaaaataatggagagaga 95  Q
    |||| ||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||| || ||||||||||| |||||||    
T  29609768 caatgatatttgtacatcaatttaatgacaactttggtgacaactttgttttcctctcttttgatttgtcaaaaaataatgaagagaga 29609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 26041490 - 26041374
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| |||||||||| |||| |||| |||    
T  26041490 caatgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagaaaaaaaggaagaga 26041391  T
Q  108 gaagataataacatcat 124  Q
    ||  |||| ||||||||    
T  26041390 gagaataagaacatcat 26041374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 10014851 - 10014936
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| || |||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  10014851 atatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 10014936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 25614717 - 25614802
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| | || |||||||||||||||| ||| ||||||| |||| || | |||||||||||| |||||||||||||||    
T  25614717 atatttgtacatctaattgatgacaattttggtgacaaccttgtttttctctcttcttattggtaaaaaacaatggagagagaaaa 25614802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 42060832 - 42060747
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| |||||||||||| |||||||| |||||||  || |||| ||||||||||| ||||| |||||||||| ||||    
T  42060832 atatttgtacatctatttaatgacaactttggtgacaactttgcctttctctcttttgattggtcaaaaacaatggagagaaaaaa 42060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 27164728 - 27164844
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| |||||| | |||||| |||| |||    
T  27164728 caatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggaaaaagaaaaaggaagaga 27164827  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  27164828 gaggataagaccatcat 27164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 30864308 - 30864424
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  30864308 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctcttttcttattggtcaaaaacaatggagagagaaaaaggaagaga 30864407  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  30864408 gaggataagaccatcat 30864424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 42431898 - 42431787
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| ||||| ||    
T  42431898 atatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagagga 42431799  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  42431798 taagatcatcat 42431787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 39369482 - 39369381
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||  |||||||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  39369482 caatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaagaga 39369383  T
Q  108 ga 109  Q
    ||    
T  39369382 ga 39369381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 33050363 - 33050247
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||| ||||||||||| |||| |||    
T  33050363 caatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagagagaaaaaggaagaga 33050264  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  33050263 gaggataagaccatcat 33050247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 44511319 - 44511203
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| || |||||||| |||| || | |||||| ||||| ||||| |||| |||| |||| |||    
T  44511319 caatgatatttgtacatccattttatgacaactttagtgacaattttgtttttctcttttcttattggtcaaaaacaatggggagaaaaaaaggaagaga 44511220  T
Q  108 gaagataataacatcat 124  Q
    ||  |||| ||||||||    
T  44511219 gagaataagaacatcat 44511203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 42476464 - 42476557
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||||||||||||| || ||||||| ||||| || ||| |||||||  ||| |||| |||||| ||||| || |||||||||||| |||||||    
T  42476464 atatttgtacatccaattgatgacaactttggcgacaaccttgtttttttctctttttattggtcaaaaacaacggagagagaaaaaggaatag 42476557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 116811 - 116695
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||  ||||||| || | |||| ||| || ||||| |||||||||||||||  ||| |||    
T  116811 caatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctttctttttattcgtcaaaaacaatggagagagaaaaatgaagaga 116712  T
Q  108 gaagataataacatcat 124  Q
     ||||||| | ||||||    
T  116711 aaagataagaccatcat 116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 2469819 - 2469771
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  2469819 ctctattttcattggtaaaaaataatggagagagaaaaaggaagagaga 2469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 30402084 - 30402168
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag 94  Q
    |||| ||||||||||||| |||| |||| ||||||||||| ||||||||||  || | |||| |||||||||||| |||| ||||||    
T  30402084 caatgatatttgtacatctatttcatgataattttggtgacaactttgttt--ctttctttttattggtaaaaaacaatgaagagag 30402168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 38978671 - 38978565
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||| ||| ||||||| ||| |||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| |||| |||    
T  38978671 caatgatatttgtacatcc-tttcatgacaactttagtgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaagaga 38978573  T
Q  108 gaagataa 115  Q
    || |||||    
T  38978572 gaggataa 38978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 8742558 - 8742473
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||| | | ||| |||||||||||||||    
T  8742558 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattgatcataaacaatggagagagaaaa 8742473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 37385129 - 37385214
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||| | |||| || | |||||| ||||| ||| |||||||||||    
T  37385129 atatttgtacatccaattgatgacaactttggtgacaaccttgttcttctcttttcttattggtcaaaaacaattgagagagaaaa 37385214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 42640986 - 42640933
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  42640986 tgataactttgattttctcttttttgattggtcaaaaataatagagagagaaaa 42640933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 47530187 - 47530272
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||| || | || | |||||  ||||| |||||||||| ||||    
T  47530187 atatttgtacatctatttcatgacaactttggtgataaccttgtttttctttcttcttattggctaaaaacaatggagagaaaaaa 47530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 20406721 - 20406605
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||| ||||||||||||| |||| || || || |||||||||||  ||| |||| |||||| ||||||||  ||||||| |||   || |||    
T  20406721 caatgatatttggacatccatttaataacaacttcggcgacaactttgtttttttctctttttattggtcaaaaataacagagagaggaaaattaagaga 20406622  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  20406621 gaggataaaaacatcat 20406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 23330087 - 23330002
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||| ||||||||| || |||||| ||  ||||||||||| ||| ||||||  |||| |||| |||||||||||||||| ||||||||    
T  23330087 caatgatatttgtatattcatttattggaaattttggtgacaaccttgttt--ctctctttttattggtaaaaaataatagagagaga 23330002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 29162170 - 29162286
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||  ||||||| ||| |||| ||  ||||||| |||| |||| |||| | ||||| ||||||||||||||| | || |||    
T  29162170 caatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctctttttattgatcaaaaacaatggagagagaaaaagaaagaga 29162269  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  29162270 gaggataagatcatcat 29162286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 3345042 - 3344955
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||| |||||||||||| ||||||||||||||||||  || ||| |||||||  ||| |||| |   || ||||||||||||||||||    
T  3345042 caatgatatttgtacattcatttaatgacaattttgaagacaaccttgtttttatctcttttaacatgtcaaaaataatggagagaga 3344955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 16645557 - 16645623
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattg 74  Q
    |||| |||||||| ||| |||||||||| || |||| ||| || ||||||||||||| |||||||||    
T  16645557 caatgatatttgtccattcatttaatgataactttgttgacaattttgttttcctctcttttgattg 16645623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 17619918 - 17619984
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattg 74  Q
    |||| |||||||| ||| |||||||||| || |||| ||| || ||||||||||||| |||||||||    
T  17619918 caatgatatttgtccattcatttaatgataactttgttgacaattttgttttcctctcttttgattg 17619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 19426728 - 19426659
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||||| ||||| ||| |||| |||||  ||||||||||||||||||||| |||| |||||    
T  19426728 ttttggtgacaacttttttttc-tctcttttcattggataaaaataatggagagagaaaaaggaagagaga 19426659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 22331129 - 22331203
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||| | || ||| ||||| | |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  22331129 acaatttttgggacaaccttgttatgctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 22331203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 47424908 - 47424977
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| || ||| ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  47424908 ttttggtgacaatttt-ttttcctctctttttattggttaaaaacaatggagagagaaaaaggaagagaga 47424977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 21037168 - 21037217
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| |||||||||||| ||| ||||  |||||||||||||||    
T  21037168 aactttgtttttctctattttgatcggtcaaaatcaatggagagagaaaa 21037217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 21153191 - 21153142
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  21153191 aactttgattttctctcttttgattggtcaaaaataatagagagagaaaa 21153142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 30862768 - 30862715
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  30862768 tttttctctctttttattggtcaaaaataatggagagagaaaaaggaagagaga 30862715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 30982293 - 30982346
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||| |||||||||||||||| || |||||||| |||| |||||    
T  30982293 ttttcctctctttttattggtaaaaaataattgaaagagaaaaaggaagagaga 30982346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 36990173 - 36990120
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  36990173 tttttctctttttttattggttaaaaataatggagagagaaaaaggaagagaga 36990120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 44894371 - 44894455
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||| |||||||||| | || |||||| |||| |||||  |||  |||| |||| |||||||||||| |||||||||||||||    
T  44894371 atatttgaacatccatttga-gataatttttgtgacaacttcttttatctctcttttcattggtaaaaaacaatggagagagaaaa 44894455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 19880122 - 19880229
Alignment:
Q  8 caataatatttgtacatccattt-aatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    |||||||||||||||||||||||  ||||||| ||| |||| ||  || |||| |||| || | || |||  |||||||||||||||||||| |||| ||    
T  19880122 caataatatttgtacatccatttgcatgacaactttagtgacaatcttatttttctctcttcttatgggt-caaaataatggagagagaaaaaggaagag 19880220  T
Q  107 agaagataa 115  Q
    ||| |||||    
T  19880221 agaggataa 19880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 34348971 - 34349019
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  34348971 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 34349019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 37325728 - 37325800
Alignment:
Q  26 catttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||| |||| |||||| |||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  37325728 catttcatgaaaattttagtgacaatattgtttttctctctttttattggttaaaaacaatggagagagaaaa 37325800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 49189101 - 49189211
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| ||||||||||||||| | || ||    
T  49189101 acaatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaagaaagag 49189200  T
Q  107 agaagataata 117  Q
    ||| |||||||    
T  49189201 agaggataata 49189211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 10385594 - 10385478
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||||||||||||| || |||||||| || |||| ||| |||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  10385594 caatgatatttgtacatccatttaatgataactttggtgacaattttgcttttctcttttttgattggtcaaaaacaatggagagagaaaaaggaataga 10385495  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  10385494 gaggataacaacatcat 10385478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 43195980 - 43196096
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| | | |||| ||||||||||| ||||| ||||||||||||||| |||| |||    
T  43195980 caataatatttgtacatctatttaatgacaactttggtgataactttgatgttctctcttttgattggtcaaaaacaatggagagagaaaaaggaagaga 43196079  T
Q  108 gaagataataacatcat 124  Q
    ||  |||| ||||||||    
T  43196080 gagaataacaacatcat 43196096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 5383939 - 5383823
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||||||||||| |||| |||||||| ||||||||||| |||| ||||||||||  ||||| |||| ||||| |||| |||| |||    
T  5383939 caatgatatttgtacatccatttaattacaactttggtgacaactttgtttttctctcttttgattggctaaaaacaatgaagagaaaaaaaggaagaga 5383840  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  5383839 gaggataacaacatcat 5383823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 37669578 - 37669462
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| |||||||||| ||||| ||||| ||||||||| |||||| ||||||||||| ||||| ||| |||||  |||| |||| |||    
T  37669578 caatgatatttgtacattcatttaatgataatttcggtgacaactttgttctcctcttttttgattggtcaaaaacaatagagagtcaaaaaggaagaga 37669479  T
Q  108 gaagataataacatcat 124  Q
    || ||||||||||||||    
T  37669478 gaggataataacatcat 37669462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 2257617 - 2257701
Alignment:
Q  40 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||| ||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||| || |||||||||||||||||    
T  2257617 tttgatgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaaaagtgaagataataacatcat 2257701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 36669267 - 36669377
Alignment:
Q  14 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 113  Q
    |||||||| |||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| |||| ||||| |||    
T  36669267 tatttgtaaatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagagagaggat 36669366  T
Q  114 aataacatcat 124  Q
    || ||||||||    
T  36669367 aaaaacatcat 36669377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 39669964 - 39669873
Alignment:
Q  30 taatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 121  Q
    ||||||||| |||| ||| |||||| |||| ||||||||| ||||||  |||| ||||||||||||||| | |||||||| |||||||||||    
T  39669964 taatgacaactttgatgacaactttatttttctctatttttattggttgaaaacaatggagagagaaaaagaaatagagatgataataacat 39669873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 42843240 - 42843325
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || |||| ||||||||||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  42843240 atatttgtacatccaattgatgataattttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 42843325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 6829676 - 6829792
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||||||| ||||||||||| |||| |||    
T  6829676 caatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaataatagagagagaaaaaggaagaga 6829775  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  6829776 gatgataagaccatcat 6829792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 13813738 - 13813622
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  || |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  13813738 caatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 13813639  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  13813638 gaggataagaccatcat 13813622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 26501475 - 26501359
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  ||||||| |||  ||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  |||||||    
T  26501475 caatgatatttgtacatctattacatgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaataga 26501376  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  26501375 gaggataagaacatcat 26501359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 27578362 - 27578246
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||| ||||  ||||||||||| || | ||| ||||||| ||||||| | |||||| ||||| ||||||||||||||| | || |||    
T  27578362 caatgatatttgtacattcattccatgacaattttagtaacaaccttgtttttctctattcttattggtcaaaaacaatggagagagaaaaagaaagaga 27578263  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  27578262 gaggataagaccatcat 27578246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 50035429 - 50035545
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||| ||||||| ||| |||| |||||| |||| |||| || | |||||| ||||| ||| ||||||||||| |||| |||    
T  50035429 caatgatatttgtacatctatttcatgacaactttagtgacaactttatttttctcttttgttattggtcaaaaagaatagagagagaaaaaggaagaga 50035528  T
Q  108 gaagataataacatcat 124  Q
    || ||||| || |||||    
T  50035529 gatgataaaaatatcat 50035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 50777319 - 50777415
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||||||||| || |||||||||||||||| ||| ||||||| |||| || | |||||| ||||| ||| |||||| |||| |||| |||||    
T  50777319 atatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatagagagataaaaaggaagagaga 50777415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 3291321 - 3291432
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||||||||||||||||  |||||||||||  ||||||| ||||||  |||| || |  ||||| |||||||||||| |||||||| |||| ||||| ||    
T  3291321 atatttgtacatccattccatgacaattttaatgataaccttgtttctctctcttctttttggtcaaaaataatggaaagagaaaaaggaagagagatga 3291420  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  3291421 taagaccatcat 3291432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 7371844 - 7371955
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||| ||||||||||||  ||||||| |||  ||||||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||  ||||| ||    
T  7371844 atatatgtacatccattccatgacaactttactgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaggagagagga 7371943  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  7371944 taagaccatcat 7371955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 9011820 - 9011709
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||||||||||||||||| |||||||| || |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| | || ||||| ||    
T  9011820 atatttgtacatccatttcatgacaatgttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagagga 9011721  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  9011720 taagaccatcat 9011709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 19920942 - 19920852
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||  |||||||||||| ||||| |||||||| ||||||||||| |||| || | |||||| ||||| |||| ||||||||||    
T  19920942 caatgatattttgacatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaatgaagagagaaaa 19920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 50797955 - 50797853
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||| | || |||| || |||||||| ||  |||||||  ||| |||| |||||| ||||||||||||||||||||| |||| ||||| ||    
T  50797955 atatttgtacatctaattgatgataactttggtgacaaacttgtttttatctctttttattggtcaaaaataatggagagagaaaaaggaagagagatga 50797856  T
Q  113 taa 115  Q
    |||    
T  50797855 taa 50797853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 10302271 - 10302324
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||    
T  10302271 tgataactttgattttctctcttttgattggtaaaaaataatagagagagaaaa 10302324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 25130878 - 25130767
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||| |||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||| |||| ||||| |||| ||||| ||    
T  25130878 atatttgtacatctatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatgaagagggaaaaaggaagagagagga 25130779  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  25130778 taagatcatcat 25130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 29362624 - 29362690
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||||||||||    
T  29362624 aactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaagataa 29362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 8670215 - 8670162
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||||| || | ||||||||||| ||||||||| |||||||||||    
T  8670215 tgataactttgtttttctatcttttgattggtcaaaaataatagagagagaaaa 8670162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 27895652 - 27895752
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||  |||| ||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  27895652 caatgatattttgacattcatttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaa-aatggagagagaaaaaggaagaga 27895750  T
Q  108 ga 109  Q
    ||    
T  27895751 ga 27895752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 51193029 - 51193114
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| ||||||| |||| || | |||||  |||||||||||||||||||||    
T  51193029 atatatgtacatccatttgatgacaactttcatgacaacattgtttttctctcttcttattggccaaaaataatggagagagaaaa 51193114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 27563653 - 27563617
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttg 43  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27563653 acaatgatatttgtacatccatttaatgacaattttg 27563617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 42615996 - 42615936
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||||| || | ||||||||||| ||||||||| ||||||||||| | ||||||||    
T  42615996 aactttgtttttctattttttgattggtcaaaaataatagagagagaaaaagaaatagaga 42615936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 43457716 - 43457823
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||| ||||||||||||| | ||||| |||| ||| ||| ||||||| || | |||| |||| | ||||| ||||||||||||||| |||| ||||| ||    
T  43457716 atatatgtacatccatttgaagacaaatttgatgacaaccttgtttttctgtttttt-attgatcaaaaagaatggagagagaaaaaggaagagagagga 43457814  T
Q  113 taataacat 121  Q
     ||||||||    
T  43457815 aaataacat 43457823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 7078396 - 7078495
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    |||| ||||||||||||| | ||||| |||| ||| ||| ||||||  |||| || | |||||| ||||| ||||||||||| ||| |||| ||||||||    
T  7078396 atatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttctaattggtcaaaaacaatggagagaggaaaaggaagagagaaga 7078495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 25995642 - 25995524
Alignment:
Q  8 caataatatttgtacatccat--ttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 105  Q
    |||| ||||||||||||| ||  || ||||||| |||  ||| ||| || |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |    
T  25995642 caatgatatttgtacatctatatttcatgacaactttaatgacaaccttatttttctctctttttattggtcaaaaacaatggagagagaaaaaggaaga 25995543  T
Q  106 gagaagataataacatcat 124  Q
    |||| ||||| | ||||||    
T  25995542 gagaggataagaccatcat 25995524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 29489255 - 29489366
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||  |||| ||||||| ||| |||| ||| ||||||| || | || | |||||| ||||| |||||||||||||||  ||| ||||| ||    
T  29489255 atatttgtacatatatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaatggagagagaaaaaagaagagagagga 29489354  T
Q  113 taataacatcat 124  Q
    ||| | ||||||    
T  29489355 taagaccatcat 29489366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 15061994 - 15061924
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||| |||||| |||| |||| |||| |||||  ||||| ||||||||||||||| |||| |||||    
T  15061994 ttttggtgacaactttttttttctctctttttattggataaaaacaatggagagagaaaaaggaagagaga 15061924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 26585122 - 26585180
Alignment:
Q  66 ttttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||| |||||| ||||||||||||||||||||| |||| ||||| ||||| | ||||||    
T  26585122 tttttattggtcaaaaataatggagagagaaaaaggaagagagaggataagaccatcat 26585180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 46902778 - 46902708
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataac-tttgttttcctctattttgattggtaaaaaa 82  Q
    ||||||||||||||| || ||||||||||| |||| ||| ||| ||||||||| || | ||||||||||||    
T  46902778 atatttgtacatccaattgatgacaattttagtgacaactttttttttcctctcttcttattggtaaaaaa 46902708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 366801 - 366748
Alignment:
Q  44 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 97  Q
    |||| |||||| ||||||||| |||| |||||| ||||| ||||||||||||||    
T  366801 gtgacaacttttttttcctctcttttcattggtcaaaaacaatggagagagaaa 366748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 4618786 - 4618725
Alignment:
Q  46 gataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||||| ||||| | |||| |||| |||||| |||||||||||||||| |||| ||||||||    
T  4618786 gataaccttgttgttctcttttttcattggtcaaaaataatggagagaaaaaaaggaataga 4618725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 27563620 - 27563551
Alignment:
Q  52 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 121  Q
    |||||||| |||| ||||||||||| | ||| ||||||||||||||| |||| | | ||||||| |||||    
T  27563620 tttgtttttctctcttttgattggtcataaacaatggagagagaaaaaggaagataaaagataacaacat 27563551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 51704737 - 51704794
Alignment:
Q  67 tttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||||| ||||||||||||||||||| |  ||||| |||| | |||||||||||    
T  51704737 tttgattggtcaaaaataatggagagagaagaaagaataaagaaaacaataacatcat 51704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 3606024 - 3606060
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaa 81  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  3606024 tgataactttgtttttctctattttgattggtcaaaa 3606060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 8905869 - 8905801
Alignment:
Q  47 ataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    ||||||||||||| ||||  | |||||||| ||||||||| |||| |||||| |||| |||||| ||||    
T  8905869 ataactttgtttttctcttctatgattggtcaaaaataatagagaaagaaaaaggaagagagaaaataa 8905801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 24749633 - 24749669
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttgg 44  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  24749633 caatgatatttgtacatccatttaataacaattttgg 24749669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 25302562 - 25302638
Alignment:
Q  34 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaa 110  Q
    ||||||||  |||| |||||| |||| |||| |||| |||||| ||||| ||| ||||||||||| |||| ||||||    
T  25302562 gacaatttatgtgacaactttttttttctctcttttcattggttaaaaacaatagagagagaaaaaggaagagagaa 25302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 40610403 - 40610308
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| |||||||||| | ||||| ||| |||| |||||  |||  |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  40610403 atatttgaacatccatttga-gacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 40610308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 11089757 - 11089664
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattgg-taaaaaataatggagagagaaaagg 100  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||||| |||||||||||||    
T  11089757 caatgatatttgtacatccatttaatgacaattttggtgacaactttgtttttctcttttttgattggttaaaaaataatagagagagaaaagg 11089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 43587821 - 43587705
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||| |||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||| |||    
T  43587821 caatgatatttgtatatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtaaaaagcaatggagagagaaaaaggaagaga 43587722  T
Q  108 gaagataataacatcat 124  Q
    ||  |||| ||||||||    
T  43587721 gagaataacaacatcat 43587705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 34972245 - 34972131
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||||||||||| |||||||| || |||||||| |||| ||||||||| | |||||||||||||||| ||||  ||| |||    
T  34972245 caatgatatttgtacatctatttaatgacaactttggtgacaattttgtttttctcttttttgattgatcaaaaataatggagagaaaaaa--gaagaga 34972148  T
Q  108 gaagataataacatcat 124  Q
    |||||||||||||||||    
T  34972147 gaagataataacatcat 34972131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 38504350 - 38504234
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||| ||||||||||| ||||| |||||||||||||||  ||| ||     
T  38504350 caatgatatttgtacatccatttaattacaattttggtgacaattttgtttttctctcttttgattggtcaaaaacaatggagagagaaaaatgaagagt 38504251  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  38504250 gaggataacaacatcat 38504234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 23952675 - 23952562
Alignment:
Q  6 cacaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 105  Q
    |||||| |||||||||| || |||| ||||||| ||| ||||||| |||||||| |||| |||| |||||| ||||||||||||||||||||| | ||||    
T  23952675 cacaatgatatttgtacgtctattttatgacaactttagtgataattttgtttttctctttttttattggtcaaaaataatggagagagaaaa-gaaata 23952577  T
Q  106 gagaagataataaca 120  Q
    |||||||||| ||||    
T  23952576 gagaagataagaaca 23952562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 43602314 - 43602430
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||| ||||||||||| ||||| |||  ||| |||||| |||| |||    
T  43602314 caatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaacaatatagaaagaaaaaggaaaaga 43602413  T
Q  108 gaagataataacatcat 124  Q
    ||  |||||| ||||||    
T  43602414 gagaataataccatcat 43602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 41293612 - 41293728
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||| |||||||||||||||||  ||||||| ||| |||| ||||| ||||| |||| || | |||||| ||||| ||||||||||||||| |||| ||    
T  41293612 acaatgatatttgtacatccattccatgacaactttagtgacaactt-gtttttctctcttcttattggtcaaaaacaatggagagagaaaatggaagag 41293710  T
Q  107 agaagataataacatcat 124  Q
    ||||||||| | ||||||    
T  41293711 agaagataagaccatcat 41293728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 30927822 - 30927938
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | || |||    
T  30927822 caatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagaga 30927921  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  30927922 gaggataagaccatcat 30927938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 6105326 - 6105416
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||| |||||||||||||||| ||||| ||| |||| |||||| ||||||||| ||||||||||| ||||| |||| ||||| ||||    
T  6105326 caatgatacttgtacatccatttaaagacaactttagtgacaactttattttcctctcttttgattggtcaaaaacaatgtagagaaaaaa 6105416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 6825167 - 6825269
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 106  Q
    ||||||||||||||||||| ||||| |||||| |||||||  ||| || |||| |||| || | |||||| ||||| ||||||||||||||| |||| ||    
T  6825167 acaataatatttgtacatctatttattgacaactttggtgtcaaccttatttttctctcttcttattggttaaaaacaatggagagagaaaaaggaacag 6825266  T
Q  107 aga 109  Q
    |||    
T  6825267 aga 6825269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 11139071 - 11138986
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| | || ||||||| |||||||| ||||||||||| || | |||| |||||| |||||||||| ||||||||||    
T  11139071 atatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtcaaaaataatgaagagagaaaa 11138986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 1065597 - 1065481
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||||||| ||||||| || | || |  ||||| ||||| ||||||||||||||| |||| |||    
T  1065597 caatgatatttgtacatccattccatgacaactttagtgataaccttgtttttctatcttctttttggtcaaaaacaatggagagagaaaaaggaagaga 1065498  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  1065497 gaggataagaccatcat 1065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 30129584 - 30129500
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 97  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| ||| |||| || | |||||| |||||||||||||| |||||    
T  30129584 atatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtcaaaaataatggagaaagaaa 30129500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 41273695 - 41273579
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| || | ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  41273695 caatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 41273596  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  41273595 gaggataagaccatcat 41273579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 29509405 - 29509330
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    |||||||||||||||| |||| |||||| ||||| |||| |||||||||| |||| ||||| |||||||| |||||    
T  29509405 aactttgttttcctctctttttattggtcaaaaacaatgaagagagaaaaaggaagagagaggataataatatcat 29509330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 33817338 - 33817247
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||| ||||||||||||| |||| || |||||||| |||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  33817338 acaatgatatttgtacatctatttcataacaattttagtgacaatcttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 33817247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 39258946 - 39259053
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  |||||||||||  ||||||  ||||||| |||| || | ||| || ||||| ||||||||||||||| |||| |||    
T  39258946 caatgatatttgtacatccattccatgacaattttaatgataatcttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaagaga 39259045  T
Q  108 gaagataa 115  Q
    || |||||    
T  39259046 gatgataa 39259053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 2597056 - 2597146
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||||||||||| || || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  2597056 atatttgtacattcaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 2597146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 5925230 - 5925145
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| || |||| ||||||| | |||||| |||||||||||||||||||||    
T  5925230 atatatgtacatccatttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaaataatggagagagaaaa 5925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 19723097 - 19723213
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| || | ||||||| ||| |||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| |||| |||    
T  19723097 caatgatatttgtacatctatatcatgacaactttagtgacaaccttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaagaga 19723196  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  19723197 gaggataagaccatcat 19723213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 37562037 - 37562133
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||||||||| || ||||||| |||| ||| ||| ||||||| |||| || | |||||| ||||| |||||||| |||||| |||| |||||    
T  37562037 atatttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaaagaaaaaggaagagaga 37562133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 6849408 - 6849466
Alignment:
Q  57 tttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    ||||||||||||  |||||||||||||||| ||||||||||| |||| |||||| ||||    
T  6849408 tttcctctatttctattggtaaaaaataatagagagagaaaaaggaagagagaaaataa 6849466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 11879412 - 11879482
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| | |||||  |||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||    
T  11879412 ttttggtaacaacttcctttttctctcttttgattggttaaaaataatggagagagaaaaaggaagagaga 11879482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 11896828 - 11896898
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| | |||||  |||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||    
T  11896828 ttttggtaacaacttcctttttctctcttttgattggttaaaaataatggagagagaaaaaggaagagaga 11896898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 14531801 - 14531683
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||||||||||||||||| || | |||||||  ||  ||| ||| || |||| |||| || | |||| |  |||| |||||||||||||||  |||||||    
T  14531801 caataatatttgtacatctatctcatgacaacattaatgacaaccttatttttctctcttcttattgatctaaaacaatggagagagaaaaatgaataga 14531702  T
Q  108 gaagataataacatcatct 126  Q
    |||||||| ||||||||||    
T  14531701 gaagataagaacatcatct 14531683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 36064205 - 36064103
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||||| || |||| || |||||||| ||  ||| |||  ||| |||| |||||| |||||||||||||||| |||| |||| ||||| ||    
T  36064205 atatttgtacatccaattgatgataactttggtgacaaacttgcttttatctctttttattggtcaaaaataatggagagaaaaaaaggaagagagatga 36064106  T
Q  113 taa 115  Q
    |||    
T  36064105 taa 36064103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 36497836 - 36497734
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||||||| | || ||||||| |||| | | ||| ||||||| |||| |||| |||||| ||||| ||| ||||||||||| | || ||||||||    
T  36497836 atatttgtacatctaattgatgacaactttgataacaaccttgtttttctctctttttattggttaaaaacaatagagagagaaaaagtaagagagaaga 36497737  T
Q  113 taa 115  Q
    |||    
T  36497736 taa 36497734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 43186469 - 43186386
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||||||||||| ||||  || |||||||| |||| || |||||||  ||||||||| |||||| ||||| |||||||||||||||    
T  43186469 atatttgtacattcattccataacaattttagtgacaattttgttt--ctctatttttattggtcaaaaacaatggagagagaaaa 43186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 5924985 - 5924900
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| || |||| |||| || | |||||| |||||||||||||||||||||    
T  5924985 atatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaaataatggagagagaaaa 5924900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 34765746 - 34765831
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| | || ||||||||||| |||| ||| ||  ||| |||| |||| |||||| ||||| |||||||||||||||    
T  34765746 atatttgtacatctaattgatgacaattttagtgacaaccttacttttctctttttttattggtcaaaaacaatggagagagaaaa 34765831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 37033029 - 37033093
Alignment:
Q  44 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||||||| ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  37033029 gtgataacttttttttcctct-ttttcattggtcaaaaacaatggagagagaaaaaggaaaagaga 37033093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 39153612 - 39153665
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  39153612 tgataactttgattttctctcttttgattggtcaaaaataatagagagagaaaa 39153665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 13884472 - 13884380
Alignment:
Q  32 atgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 124  Q
    ||||||| ||| |||| || |||||||| |||| || | |||| | ||||| ||||||||||||||| |||| ||||| ||||| ||||||||    
T  13884472 atgacaactttagtgacaattttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcat 13884380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 30925577 - 30925652
Alignment:
Q  39 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    ||||||||| |||||| ||||| ||| |||| |||||| ||||| ||||||||||||||| |||| |||||| ||||    
T  30925577 ttttggtgacaacttttttttc-tctcttttcattggttaaaaacaatggagagagaaaaaggaagagagaaaataa 30925652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 40211638 - 40211754
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||||||| ||| |||| || | ||   |||||||||| |||| || | |||||| ||||| ||||||||||||||| | || |||    
T  40211638 caatgatatttgtacatccattgaataacaacttagttgtatactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaagtaagaga 40211737  T
Q  108 gaagataataacatcat 124  Q
    ||  |||| ||||||||    
T  40211738 gataataacaacatcat 40211754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 40719576 - 40719636
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    ||||||| ||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  40719576 aactttggttttctctcttttgattggtcaaaaataatagagagagaaaaaggaagagaga 40719636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 14228873 - 14228786
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 95  Q
    |||| |||| ||||||||||||| |||| |||||| |||| || ||| |||| |||| |||| |||||| ||||| |||| |||||||    
T  14228873 caatgatatatgtacatccatttcatgataattttagtgacaattttatttttctctttttttattggtcaaaaacaatgaagagaga 14228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 35595391 - 35595300
Alignment:
Q  7 acaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||| |||||||||||||  | |||||| || |||||||| ||| ||| ||| |||| || | |||||||||||| |||||||| ||||||    
T  35595391 acaatgatatttgtacatctgtctaatgataagtttggtgacaaccttgcttttctctcttcttattggtaaaaaacaatggagaaagaaaa 35595300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 41520010 - 41519951
Alignment:
Q  37 aattttggtgataactttgtttt-cctctattttgattggtaaaaaataatggagagaga 95  Q
    ||||||||||||||| ||||||| ||||| |||| |||||| ||||| ||||||||||||    
T  41520010 aattttggtgataaccttgtttttcctctctttttattggtcaaaaacaatggagagaga 41519951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 44086440 - 44086503
Alignment:
Q  45 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagag 108  Q
    |||||||||  ||||||||| |||  |||||| |||||||||||| ||||||||||||| ||||    
T  44086440 tgataacttccttttcctctctttctattggtcaaaaataatggaaagagaaaagggaagagag 44086503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 7129707 - 7129618
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 103  Q
    |||||||||||| ||||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| || |||||||||||| ||||    
T  7129707 atatttgtacattcatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaacggagagagaaaaaggaa 7129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 8888428 - 8888326
Alignment:
Q  13 atatttgtacatccatt-taatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaag 111  Q
    ||||||||| ||||||| || |||||| |||||||| ||| ||| ||| |||  || | |||||| ||||| ||||||||||||||| |||| ||||| |    
T  8888428 atatttgtatatccattatagtgacaactttggtgacaaccttgattttctcatttcttattggttaaaaacaatggagagagaaaaaggaagagagagg 8888329  T
Q  112 ata 114  Q
    |||    
T  8888328 ata 8888326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 22836057 - 22836131
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||| | |||||| ||||| | |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  22836057 acaatttttgggataaccttgttgtgctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 22836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 6656236 - 6656337
Alignment:
Q  14 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 113  Q
    ||||||||||||||||  |||| |||||| |||| ||| ||||||| |||| || | |||| | ||||| |||||| ||||||||  ||| ||||| |||    
T  6656236 tatttgtacatccattccatgataattttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaagagagaggat 6656335  T
Q  114 aa 115  Q
    ||    
T  6656336 aa 6656337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 6736638 - 6736739
Alignment:
Q  14 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 113  Q
    ||||||||||||||||  |||| |||||| |||| ||| ||||||| |||| || | |||| | ||||| |||||| ||||||||  ||| ||||| |||    
T  6736638 tatttgtacatccattccatgataattttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaagagagaggat 6736737  T
Q  114 aa 115  Q
    ||    
T  6736738 aa 6736739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 12783774 - 12783815
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataacttt 54  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  12783774 atatttgaacatccatttaatgacaatttttgtgacaacttt 12783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 28473484 - 28473537
Alignment:
Q  56 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  28473484 tttttctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 28473537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 30608642 - 30608691
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||| || | ||||||||||||||||||||  |||||||||||    
T  30608642 aactttgtttttctatcttttgattggtaaaaaataacagagagagaaaa 30608691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 36593677 - 36593778
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | ||| |  ||||| ||||||||||||| | |||| |||    
T  36593677 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattagccaaaaacaatggagagagaagaaggaagaga 36593776  T
Q  108 ga 109  Q
    ||    
T  36593777 ga 36593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 39027606 - 39027557
Alignment:
Q  66 ttttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 115  Q
    |||| |||||||||||||||||||||||||||| | || |||||| ||||    
T  39027606 tttttattggtaaaaaataatggagagagaaaaagaaagagagaaaataa 39027557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 9208074 - 9208114
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactt 53  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  9208074 atatttgaacatccatttaatgacaatttttgtgacaactt 9208114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 11114613 - 11114673
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 121  Q
    ||||||||  |||||| ||||||||| ||||||||||| |||| |||||| |||| |||||    
T  11114613 ctctatttctattggtcaaaaataatagagagagaaaaaggaagagagaaaataaaaacat 11114673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 22767284 - 22767208
Alignment:
Q  34 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaa 110  Q
    ||||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| ||||||    
T  22767284 gacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagaa 22767208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 40102150 - 40102102
Alignment:
Q  61 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  40102150 ctctcttttcattggtaaaaaaaaatggagagagaaaaaggaagagaga 40102102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 17155 - 17039
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||| || |||||||| ||||| |||||||||||||||  ||| |||    
T  17155 caatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaacaatggagagagaaaaaagaagaga 17056  T
Q  108 gaagataataacatcat 124  Q
    ||  |||||||||||||    
T  17055 gagaataataacatcat 17039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 1387 - 1488
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  1387 caatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 1486  T
Q  108 ga 109  Q
    ||    
T  1487 ga 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 31191 - 31307
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||| |||  |||| |||||| |||| ||||||||||| |||| || | |||||| |||||||||||||||| |||| |||| |||    
T  31191 caatgatatttgtacatctattacatgataattttagtgacaactttgtttttctctgttcttattggtcaaaaataatggagagataaaaaggaagaga 31290  T
Q  108 gaagataataacatcat 124  Q
    || ||||| ||||||||    
T  31291 gaggataagaacatcat 31307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 147147 - 147263
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  147147 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 147246  T
Q  108 gaagataataacatcat 124  Q
    || ||||| | ||||||    
T  147247 gacgataagaccatcat 147263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 2395 - 2496
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| ||||||||||||||| || |||| ||||||||||| ||  ||| ||| |||| |||| |||||| ||||||||||||||||||| | |||| |||    
T  2395 caatgatatttgtacatccaattgatgataattttggtgacaatcttgattttctctctttttattggtcaaaaataatggagagagaagaaggaagaga 2494  T
Q  108 ga 109  Q
    ||    
T  2495 ga 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 2158 - 2230
Alignment:
Q  49 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 121  Q
    |||||||||||||||| ||||||||| | |||||||||  | |||||||| |||| ||||| |||||||||||    
T  2158 aactttgttttcctctcttttgattgatcaaaaataataaaaagagaaaaaggaagagagaggataataacat 2230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 5254 - 5146
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 112  Q
    ||||||||| ||| || || ||||||||||||||| ||||||| |||  ||  |||| |||||| |||||||||||| ||||||||  ||| ||||| ||    
T  5254 atatttgtatatctatatagtgacaattttggtgacaactttgattttttcactttttattggttaaaaataatggaaagagaaaaaagaagagagatga 5155  T
Q  113 taataacat 121  Q
    ||| |||||    
T  5154 taaaaacat 5146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 29963 - 29852
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag-aaaagggaatag 106  Q
    |||| |||||||||||||||||||||||||| ||| || | ||| ||||||| |||| |||| |||| | | ||| | ||||||||| |||| |||| ||    
T  29963 caatgatatttgtacatccatttaatgacaactttagttacaaccttgtttttctctctttttattgatcagaaacattggagagagaaaaaaggaagag 29864  T
Q  107 agaagataataa 118  Q
    ||| ||||||||    
T  29863 agatgataataa 29852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 31518 - 31592
Alignment:
Q  35 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 109  Q
    |||||||| |||| |||||| |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  31518 acaatttttgtgacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaagagaga 31592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 249033 - 249123
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||| | ||||| |||||||||||||||    
T  249033 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagagagaaaa 249123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 24848 - 24763
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| |||| |||| |||||| |||| ||| || |||| |||| || | |||||| ||||| |||||||||||||||    
T  24848 atatttgtacatctatttcatgataattttagtgacaaccttatttttctctcttcttattggttaaaaacaatggagagagaaaa 24763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 18774 - 18674
Alignment:
Q  8 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 107  Q
    |||| |||||||||||||||||  | ||||| ||| |||||||| || |||| ||||||| | ||| || ||||| ||||||||||||||| |||| |||    
T  18774 caatgatatttgtacatccattcca-gacaactttagtgataaccttatttttctctattcttattagtcaaaaacaatggagagagaaaaaggaagaga 18676  T
Q  108 ga 109  Q
    ||    
T  18675 ga 18674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 72067 - 72152
Alignment:
Q  13 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 98  Q
    ||||||||||||| || |  |||||| |||||||| ||| ||| ||| ||| ||| | |||||| |||||||||||| ||||||||    
T  72067 atatttgtacatctatatggtgacaactttggtgacaaccttggttttctcaattcttattggttaaaaataatggaaagagaaaa 72152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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