View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10104A_low_223 (Length: 253)
Name: NF10104A_low_223
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10104A_low_223 |
 |  |
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[»] scaffold0067 (2 HSPs) |
 |  |  |
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[»] scaffold1344 (1 HSPs) |
 |  |  |
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[»] scaffold0854 (1 HSPs) |
 |  |  |
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[»] scaffold0043 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 8694902 - 8694745
Alignment:
Q |
5 |
gactgagatgaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcat |
104 |
Q |
|
|
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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|
T |
8694902 |
gactaagaagaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcatttaagatgcat |
8694803 |
T |
 |
Q |
105 |
ttcacaactacaatgcctcgtagacactaagcatattgattctcatgtatcaattgtc |
162 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
8694802 |
ttcacaactacaatgcctcttagacactaagcatattgattctcatgtatcaattgtc |
8694745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 8694719 - 8694627
Alignment:
Q |
161 |
tcaaaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
8694719 |
tcaaaggaatggataatttggaagaattgtgcaatggtcctctttcctttgactctctgaaaagtttagagaagctgtacatcaaggattgta |
8694627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 42)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 11408698 - 11408823
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||||| ||||| ||||||||||||||||||||| || |||||| | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
11408698 |
gaatcgtgggggaatggagaaatatcatacctgaaatggttcctttagatcaaggtatgaatgatctagttgagcttcatttaagatgcatttcacaact |
11408797 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagcata |
139 |
Q |
|
|
| |||||||| | ||||||| ||||| |
|
|
T |
11408798 |
aaaatgcctcattgacactatgcata |
11408823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 27998494 - 27998619
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||| |||| |||||||||| | |
|
|
T |
27998494 |
gaatggaggggggagggagaaatatcatacctgagatgattcctatgggtcatggtatgaatgatctagttgagcttgatttgagatccatttcacaatt |
27998593 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagcata |
139 |
Q |
|
|
|||||||||| | ||||||||||||| |
|
|
T |
27998594 |
acaatgcctcattgacactaagcata |
27998619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 28513553 - 28513401
Alignment:
Q |
5 |
gactgagatgaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcat |
104 |
Q |
|
|
|||| ||| |||| |||||||||||||||||||| || ||||| ||||||||||| ||| |||||||||||||||||| |||||| ||| |||||||| |
|
|
T |
28513553 |
gactaagaagaatggaggggggatggagaaatatgattcctgaaattgttcctatggattgtggtatgaatgatctagtcgagcttactttgagatgcat |
28513454 |
T |
 |
Q |
105 |
ttcacaactacaatgcctcgtagacactaagcatattgattctcatgtatcaa |
157 |
Q |
|
|
||||||||||||||||||| | ||||| || ||||| || ||||| ||||||| |
|
|
T |
28513453 |
ttcacaactacaatgcctcattgacaccaaacatatcgaatctcaagtatcaa |
28513401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 28472517 - 28472379
Alignment:
Q |
19 |
gaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaat |
118 |
Q |
|
|
|||||||||||||||||||| || ||||||||||||||||| || |||||||||||||||||||| |||||| |||| || | |||||||||||||||| |
|
|
T |
28472517 |
gaggggggatggagaaatatgatgcctgagattgttcctatggaccatggtatgaatgatctagtcgagcttagtttgagtagtatttcacaactacaat |
28472418 |
T |
 |
Q |
119 |
gcctcgtagacactaagcatattgattctcatgtatcaa |
157 |
Q |
|
|
||||| | |||||||| |||| ||| |||| ||||||| |
|
|
T |
28472417 |
gcctcattgacactaaacatactgaatctctagtatcaa |
28472379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 28492558 - 28492420
Alignment:
Q |
19 |
gaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaat |
118 |
Q |
|
|
|||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |||| || | |||||||||||||||| |
|
|
T |
28492558 |
gaggggggatggagaaatatgatgcctgagattgttcctatggatcatggtatgaatgatctagtcaagcttagtttgagtagtatttcacaactacaat |
28492459 |
T |
 |
Q |
119 |
gcctcgtagacactaagcatattgattctcatgtatcaa |
157 |
Q |
|
|
||||| | |||||||| |||| ||| |||| ||||||| |
|
|
T |
28492458 |
gcctcattgacactaaacatactgaatctctagtatcaa |
28492420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 11408875 - 11408964
Alignment:
Q |
164 |
aaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
11408875 |
aaggaatggataatttggaagaattgttcaatggctctctttcctttgactctctgaacagtttagagaagctgtccatcaaggattgta |
11408964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 28079482 - 28079574
Alignment:
Q |
161 |
tcaaaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| |
|
|
T |
28079482 |
tcaaaggaatggataatttggaagaattgttcaatggtcctctttcctttgactctctgaacagtttagagaagttgtccatcagtgattgta |
28079574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 27464570 - 27464435
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| | || ||||||||| | |
|
|
T |
27464570 |
gaatggaggggggatggagaaacatcatacctgagattgttcctatggatcatggtatgaatgatctagtcgagcttaatttgatatccatttcacagtt |
27464471 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagcatattgattctca |
149 |
Q |
|
|
|| |||||| | |||||| |||||| ||||||||| |
|
|
T |
27464470 |
gcactgcctcattgacactcagcatactgattctca |
27464435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 28079308 - 28079431
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
||||||| ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||| || |||| |||||||||| | |
|
|
T |
28079308 |
gaatcgaaggggggtggagaaatatcatacctgatattgttccaatggatcatggtatgaatgatctagttgagcttgaattgagatccatttcacaatt |
28079407 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagca |
137 |
Q |
|
|
||| |||||| | ||||||||||| |
|
|
T |
28079408 |
acagtgcctcattgacactaagca |
28079431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 28129854 - 28129977
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||||||||||| ||||| ||| |||||||||||||||||||| || ||||| |||||||||||| |||||||||||||||| ||| |||||||||| | |
|
|
T |
28129854 |
gaatcgagggggaatggaaaaacatcatacctgagattgttcccatggatcaaggtatgaatgatatagttgagcttcgtttgggatccatttcacaatt |
28129953 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagca |
137 |
Q |
|
|
||| |||||| | ||||||||||| |
|
|
T |
28129954 |
acagtgcctcattgacactaagca |
28129977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 28047509 - 28047587
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
T |
28047509 |
aatttggaagaattgtgcaatggtcctctttcctttgactctctgaacagtttagaggagctgtccatcaaggattgta |
28047587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 28143773 - 28143905
Alignment:
Q |
5 |
gactgagatgaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcat |
104 |
Q |
|
|
|||| ||| |||||||||||| ||||| ||| |||||||||||||||||||| || ||||| |||||||||||| |||||||||||||||| ||| ||| |
|
|
T |
28143773 |
gactaagaagaatcgagggggaatggaaaaacatcatacctgagattgttcccatggatcaaggtatgaatgatatagttgagcttcgtttgggatccat |
28143872 |
T |
 |
Q |
105 |
ttcacaactacaatgcctcgtagacactaagca |
137 |
Q |
|
|
||||||| |||| |||||| | || |||||||| |
|
|
T |
28143873 |
ttcacaattacagtgcctcattgatactaagca |
28143905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 28177940 - 28178060
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
||||||||||||| |||||||| ||| ||||||||||||||||| | ||||||||||||||||||||| | |||||| |||| |||| |||||||||| | |
|
|
T |
28177940 |
gaatcgagggggggtggagaaacatcgtacctgagattgttcctctggatcatggtatgaatgatctaatcgagcttggtttgagatccatttcacaatt |
28178039 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaa |
134 |
Q |
|
|
||| |||||| | |||||||| |
|
|
T |
28178040 |
acagtgcctcattgacactaa |
28178060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 28178105 - 28178189
Alignment:
Q |
161 |
tcaaaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaa |
245 |
Q |
|
|
||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
28178105 |
tcaaaggaatggataatttagaagaattgttcaatggtcctgtttcctttgactctctgaacagtttagagaagctgtccatcaa |
28178189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 27909693 - 27909826
Alignment:
Q |
5 |
gactgagatgaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcat |
104 |
Q |
|
|
|||| ||| ||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||| || |||| ||| |
|
|
T |
27909693 |
gactaagaagaatcgaggggggatggagaaatatcatacctgagatgattcctttgaaacatggtatgaatgatctagttgagcttgaattgagatccat |
27909792 |
T |
 |
Q |
105 |
ttcacaactacaatgcctcgtagacactaagcat |
138 |
Q |
|
|
||||||| |||| ||||| | |||||||||||| |
|
|
T |
27909793 |
ttcacaattacagtgccttattgacactaagcat |
27909826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 27962763 - 27962848
Alignment:
Q |
5 |
gactgagatgaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagctt |
90 |
Q |
|
|
|||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| |
|
|
T |
27962763 |
gactaagaagaatggaggggggatggagaaatatcatacctgagattgttcctatggagcatggtatgaatgatctagtcgagctt |
27962848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 28492386 - 28492297
Alignment:
Q |
164 |
aaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |
|
|
T |
28492386 |
aaggaatggataatttggaagaattgttcaaaggtcctctttcctttgactctctgaacagtttagagaatctgtccattgaggattgta |
28492297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 17749536 - 17749388
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||| |||||||||||| ||| || ||||||||||| |
|
|
T |
17749536 |
gaatcgaggggggatggagaaatatcatacctgatattgttccgttgaatcaaggtatgaatgatttagttgagcttcaattacaatttatttcacaact |
17749437 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagcatattgattctcatgtatcaattgtc |
162 |
Q |
|
|
| |||||| | |||||||||||||||| |||||| ||| ||| |||| |
|
|
T |
17749436 |
gcggtgcctcattgacactaagcatattgcttctcaagtaccaaatgtc |
17749388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 19050856 - 19050708
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||| |||||||||||| ||| || ||||||||||| |
|
|
T |
19050856 |
gaatcgaggggggatggagaaatatcatacctgatattgttccgttgaatcaaggtatgaatgatttagttgagcttcaattacaatttatttcacaact |
19050757 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagcatattgattctcatgtatcaattgtc |
162 |
Q |
|
|
| |||||| | |||||||||||||||| |||||| ||| ||| |||| |
|
|
T |
19050756 |
gcggtgcctcattgacactaagcatattgcttctcaagtaccaaatgtc |
19050708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 27909879 - 27909959
Alignment:
Q |
164 |
aaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatca |
244 |
Q |
|
|
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| | |||||||||| |
|
|
T |
27909879 |
aaggaatggataatttggaagaattgttcaatggtcctctttcctttgactctctgaacagtttagaggatctgtccatca |
27909959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 28513367 - 28513289
Alignment:
Q |
164 |
aaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccat |
242 |
Q |
|
|
||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
T |
28513367 |
aaggaatggataatttggaagaattgttcaaaggtcctctttcctttgactctctgaacagtttagagaatctgtccat |
28513289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 26117429 - 26117292
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaatgcctc |
123 |
Q |
|
|
|||||||| |||| |||| || |||||||||||||| ||| | ||||||||||||||| |||||||| |||| || |||||||||||||| ||||| |
|
|
T |
26117429 |
gggatggataaatctcatgccagagattgttcctatagatgaaggtatgaatgatctaattgagctttgtttgggagaaatttcacaactacagtgcctt |
26117330 |
T |
 |
Q |
124 |
gtagacactaagcatattgattctcatgtatcaattgt |
161 |
Q |
|
|
||||||||||| |||||| ||||||| ||| ||||||| |
|
|
T |
26117329 |
gtagacactaaacatattaattctcaagtaccaattgt |
26117292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 26145433 - 26145296
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaatgcctc |
123 |
Q |
|
|
|||||| |||||| |||| || ||||| |||||||| ||||| ||||||||||||||| ||||||||| | | ||| |||||||||||||| ||||| |
|
|
T |
26145433 |
gggatgtagaaatctcatgcccgagatggttcctatagatcaaggtatgaatgatctaattgagcttcatctgagagaaatttcacaactacagtgccta |
26145334 |
T |
 |
Q |
124 |
gtagacactaagcatattgattctcatgtatcaattgt |
161 |
Q |
|
|
||||||||||| |||||| ||||||| ||| ||||||| |
|
|
T |
26145333 |
gtagacactaaacatattaattctcaagtaccaattgt |
26145296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 28472345 - 28472256
Alignment:
Q |
164 |
aaggaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
||||||||||||||||||||||||||| || | |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |
|
|
T |
28472345 |
aaggaatggataatttggaagaattgttcagcggtcctctttcctttgactctctgaacagtttagagaatctgtccattgaggattgta |
28472256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 27998667 - 27998739
Alignment:
Q |
172 |
gataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatca |
244 |
Q |
|
|
||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
T |
27998667 |
gataatttggaagaattatgcaatggtcctctttcctttgactctctgaacagtttagagaagctgtacatca |
27998739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 28130039 - 28130120
Alignment:
Q |
172 |
gataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || || ||||||||| ||||||| |
|
|
T |
28130039 |
gataatttggaagaattgttcaatggtcctctttcctttgactctctgaaaagtttaaaggagttgtccatcagtgattgta |
28130120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 28143968 - 28144048
Alignment:
Q |
173 |
ataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
|||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| |||||||| | ||||||| |
|
|
T |
28143968 |
ataatttggaagaattgttcaatggtcctctttcctttgactctctgaactttttagagaagttgtccatccaagattgta |
28144048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 26239693 - 26239556
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaatgcctc |
123 |
Q |
|
|
|||||||| |||| |||| || |||||||||||||| ||| | ||||||||||||||| || |||||| | | | | |||||||||||||| | ||| |
|
|
T |
26239693 |
gggatggataaatctcatgccagagattgttcctatagatgaaggtatgaatgatctaattaagcttcatctgaaagaaatttcacaactacagtacctt |
26239594 |
T |
 |
Q |
124 |
gtagacactaagcatattgattctcatgtatcaattgt |
161 |
Q |
|
|
||||||||||| |||||| ||||||| ||| ||||||| |
|
|
T |
26239593 |
gtagacactaaacatattaattctcaagtaccaattgt |
26239556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 17749348 - 17749272
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattg |
251 |
Q |
|
|
|||||| ||||||||| ||||| |||||||| ||||||||||| || |||||||||||| |||||||||||||||| |
|
|
T |
17749348 |
aatttgaaagaattgttcaatggccctctttcttttgactctctaaacagtttagagaagttgtccatcaaggattg |
17749272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 19050668 - 19050592
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattg |
251 |
Q |
|
|
|||||| ||||||||| ||||| |||||||| ||||||||||| || |||||||||||| |||||||||||||||| |
|
|
T |
19050668 |
aatttgaaagaattgttcaatggccctctttcttttgactctctaaacagtttagagaagttgtccatcaaggattg |
19050592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 27464382 - 27464311
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaag |
246 |
Q |
|
|
|||||||||||||||| ||||| |||| |||||||||||||||| || | |||||||||| ||||||||||| |
|
|
T |
27464382 |
aatttggaagaattgttcaatggtcctgtttcctttgactctctaaacaatttagagaagttgtccatcaag |
27464311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 18081418 - 18081280
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaatgcctc |
123 |
Q |
|
|
||||||||||||| |||| || || ||||||||||| ||||| ||||||||||||||| ||||||||| ||| | || |||||||||||| | |||| |
|
|
T |
18081418 |
gggatggagaaatctcatgccagaaattgttcctatagatcaaggtatgaatgatctaattgagcttcatttgaaatatgattcacaactacagtacctc |
18081319 |
T |
 |
Q |
124 |
gtagacactaagcatattgattctcatgtatcaattgtc |
162 |
Q |
|
|
|| ||| | | |||||||||||||| ||| ||| |||| |
|
|
T |
18081318 |
atatacattgaacatattgattctcaagtaccaactgtc |
18081280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 28047349 - 28047404
Alignment:
Q |
28 |
tggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagt |
83 |
Q |
|
|
|||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| |
|
|
T |
28047349 |
tggagaaatatcatacctgatattgttcctttggatcatggtatgaataatctagt |
28047404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 26624394 - 26624464
Alignment:
Q |
21 |
ggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttc |
91 |
Q |
|
|
|||||||||||||||| |||| ||||||||||||||||| || | |||||||||||| | |||||||||| |
|
|
T |
26624394 |
ggggggatggagaaatctcatgcctgagattgttcctatagaactaggtatgaatgatattgttgagcttc |
26624464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 26183866 - 26183763
Alignment:
Q |
31 |
agaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaatgcctcgtagaca |
130 |
Q |
|
|
|||||| |||| || ||||| |||||||| || || ||||||||||||||| ||||||||| ||| | | | |||||||||||| ||||| ||||||| |
|
|
T |
26183866 |
agaaatctcatgccagagatggttcctatagaacaaggtatgaatgatctaattgagcttcatttggaaggtagttcacaactacagtgccttgtagaca |
26183767 |
T |
 |
Q |
131 |
ctaa |
134 |
Q |
|
|
|||| |
|
|
T |
26183766 |
ctaa |
26183763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 27962960 - 27963027
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccat |
242 |
Q |
|
|
|||||||||||||||| ||||| |||| | |||||||||||| |||| ||||||||||| || ||||| |
|
|
T |
27962960 |
aatttggaagaattgttcaatggtcctttgtcctttgactctttgaacagtttagagaatctttccat |
27963027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 27343891 - 27343953
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttga |
86 |
Q |
|
|
||||||||||||| |||| |||| |||| ||||||| ||| ||||||||||||||||| |||| |
|
|
T |
27343891 |
gggatggagaaatctcatgcctgggattcttcctatggataatggtatgaatgatctaattga |
27343953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 27370189 - 27370255
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagctt |
90 |
Q |
|
|
||||||||||||| |||| |||| |||| ||||||| ||| ||||||||||| ||||| |||||||| |
|
|
T |
27370189 |
gggatggagaaatctcatgcctgggattcttcctatagataatggtatgaataatctaattgagctt |
27370255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 18723538 - 18723481
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatcta |
81 |
Q |
|
|
||||||||||||| |||| |||| ||||||| |||| ||| ||||||||||||||||| |
|
|
T |
18723538 |
gggatggagaaatctcatgcctgggattgtttctatagataatggtatgaatgatcta |
18723481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 27401545 - 27401421
Alignment:
Q |
25 |
ggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaatgcctcg |
124 |
Q |
|
|
|||||||||||| |||| |||||| | |||||||| || |||| ||||||||||| ||| |||||| | ||| |||| ||||||| |||||| |
|
|
T |
27401545 |
ggatggagaaatctcatgcctgaggtggttcctatagaaaatggcatgaatgatcttgttaagcttcacctgtcatggggttcagaactacagtgcctca |
27401446 |
T |
 |
Q |
125 |
tagacactaagcatattgattctca |
149 |
Q |
|
|
|||||||||| |||||||||||||| |
|
|
T |
27401445 |
tagacactaaacatattgattctca |
27401421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 26212473 - 26212370
Alignment:
Q |
31 |
agaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaatgcctcgtagaca |
130 |
Q |
|
|
|||||| |||| || ||||| |||||||| | || ||||||||||||||| ||||||||| ||| | | | |||||||||||| ||||| ||||||| |
|
|
T |
26212473 |
agaaatctcatgccagagatggttcctataaaacaaggtatgaatgatctaattgagcttcatttggaaggtagttcacaactacagtgccttgtagaca |
26212374 |
T |
 |
Q |
131 |
ctaa |
134 |
Q |
|
|
|||| |
|
|
T |
26212373 |
ctaa |
26212370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 18031600 - 18031534
Alignment:
Q |
25 |
ggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttc |
91 |
Q |
|
|
|||||||||||| |||| || ||||| |||||||| || |||||||||||||||| ||||||||| |
|
|
T |
18031600 |
ggatggagaaatctcatgccagagatggttcctatagaaaatggtatgaatgatcttcttgagcttc |
18031534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 9330468 - 9330325
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||||||| ||| |||||||| ||||||||||||||||||||| | ||||| |||||||||||||| | |||||||| ||| |||||||||| |||||| |
|
|
T |
9330468 |
gaatcgagagggtgtggagaaacatcatacctgagattgttcctttggatcaaggtatgaatgatctggctgagcttcatttgagatgcattttacaact |
9330369 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagcatattgattctcatgtatcaa |
157 |
Q |
|
|
| |||||||| | ||||||| ||||| ||| ||||| ||||||| |
|
|
T |
9330368 |
aaaatgcctcattgacactacgcatactgaatctcaagtatcaa |
9330325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 9384251 - 9384108
Alignment:
Q |
14 |
gaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaact |
113 |
Q |
|
|
|||||||| ||| |||||||| ||||||||||||||||||||| | ||||| |||||||||||||| | |||||||| ||| |||||||||| |||||| |
|
|
T |
9384251 |
gaatcgagagggtgtggagaaacatcatacctgagattgttcctttggatcaaggtatgaatgatctggctgagcttcatttgagatgcattttacaact |
9384152 |
T |
 |
Q |
114 |
acaatgcctcgtagacactaagcatattgattctcatgtatcaa |
157 |
Q |
|
|
| |||||||| | ||||||| ||||| ||| ||||| ||||||| |
|
|
T |
9384151 |
aaaatgcctcattgacactacgcatactgaatctcaagtatcaa |
9384108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 9330280 - 9330204
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattg |
251 |
Q |
|
|
|||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
T |
9330280 |
aatttggaagaattgttcaatggtcctctttcctttgactctttgaacagtttagagaagctgtccatcaaggattg |
9330204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 9384063 - 9383987
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattg |
251 |
Q |
|
|
|||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
T |
9384063 |
aatttggaagaattgttcaatggtcctctttcctttgactctttgaacagtttagagaagctgtccatcaaggattg |
9383987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 26027408 - 26027270
Alignment:
Q |
19 |
gaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcatttcacaactacaat |
118 |
Q |
|
|
||||| || |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||| ||| |||| |||||||||| |||| | |
|
|
T |
26027408 |
gagggagggtggagaaatatcatgcctgagattgttcatatggatcatggtatgaatgatctagtcgagctttctttgagatccatttcacaattacagt |
26027309 |
T |
 |
Q |
119 |
gcctcgtagacactaagcatattgattctcatgtatcaa |
157 |
Q |
|
|
|||| | ||||||||| || ||| ||||| ||||||| |
|
|
T |
26027308 |
acctcattaacactaagcctactgaatctcaagtatcaa |
26027270 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 26027225 - 26027166
Alignment:
Q |
175 |
aatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaag |
234 |
Q |
|
|
|||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||| |
|
|
T |
26027225 |
aatttggaagaattgttcaatggtcctctttcctttgactctctcaacagtttagagaag |
26027166 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 23851 - 23988
Alignment:
Q |
5 |
gactgagatgaatcgaggggggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttgagcttcgtttaagatgcat |
104 |
Q |
|
|
|||| ||| |||||||| ||||||||||||| ||||||| |||||||| |||| ||||| |||||||| ||| ||||||| ||| |||| || ||||| |
|
|
T |
23851 |
gactaagaagaatcgagacgggatggagaaatctcataccccagattgtttctatggatcaaggtatgaaagatatagttgaacttagtttgagttgcat |
23950 |
T |
 |
Q |
105 |
ttcacaactacaatgcctcgtagacactaagcatattg |
142 |
Q |
|
|
||||||||| | | |||||| ||||| ||| |||||| |
|
|
T |
23951 |
ttcacaacttcggtacctcgttgacacgaaggatattg |
23988 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 24040 - 24126
Alignment:
Q |
167 |
gaatggataatttggaagaattgtgcaatgatcctctttcctttgactctctgaaaagtttagagaagctgtccatcaaggattgta |
253 |
Q |
|
|
||||||| |||||||||||| ||| |||| ||| |||||||||||| |||||| | |||| ||||| | || ||||||||||||| |
|
|
T |
24040 |
gaatggaaaatttggaagaactgtttaatggtcccgtttcctttgactttctgaagaatttacagaagatatcaatcaaggattgta |
24126 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1344 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1344
Description:
Target: scaffold1344; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 578 - 640
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatctagttga |
86 |
Q |
|
|
||||||||||||| |||| |||| |||| ||||||| ||| ||||||||||||||||| |||| |
|
|
T |
578 |
gggatggagaaatctcatgcctgggattattcctatagataatggtatgaatgatctaattga |
640 |
T |
 |
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Target: scaffold0854 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0854
Description:
Target: scaffold0854; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 4590 - 4533
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatcta |
81 |
Q |
|
|
||||||||||||| |||| |||| |||||||||||| ||| ||||||||||| ||||| |
|
|
T |
4590 |
gggatggagaaatctcatgcctgggattgttcctatagataatggtatgaattatcta |
4533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 73362 - 73305
Alignment:
Q |
24 |
gggatggagaaatatcatacctgagattgttcctatcgatcatggtatgaatgatcta |
81 |
Q |
|
|
||||||||||||| |||| |||| ||||||| |||| ||| ||||||||||||||||| |
|
|
T |
73362 |
gggatggagaaatctcatgcctgggattgtttctatagataatggtatgaatgatcta |
73305 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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