View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104A_low_24 (Length: 441)
Name: NF10104A_low_24
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104A_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 19 - 429
Target Start/End: Original strand, 44826515 - 44826925
Alignment:
| Q |
19 |
acatcagggtcacaatctcttgaagctgcaaaacatggacagtgtcgacttctacactgactcttagtacactgacatcctccaaatagatttttacaga |
118 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
44826515 |
acatcagggtcacaatctcttgaagctgcaaaacatggacagtgtcgacttctacactgactcttagtacactgacatcctccaaatcgatttttacaga |
44826614 |
T |
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| Q |
119 |
gctttgaacacctgaaggtagaaaatataactgatcacattgaaaacatagttgttttccatcgaaaagtaacataattaaatgaaaattgacataccca |
218 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826615 |
gctttgaacacctgaaggtaaaaaatataactgatcacattgaaaacatagttgttttccatcgaaaagtaacataattaaatgaaaattgacataccca |
44826714 |
T |
|
| Q |
219 |
caatatttttcacagcaataaccattaagacgacatgtacattgctttccacacgccccctcacattcacaaggtgtatagtgcttttccagtttgtttt |
318 |
Q |
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|||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826715 |
caatatttttcacagcaaaaaccattaagacgacatggacattgctttccacacgccccctcacattcacaaggtgtatagtgcttttccagtttgtttt |
44826814 |
T |
|
| Q |
319 |
tctcatcggtacttcctcttcttttccatttggatggaagtccacaagattttgaagaatatttgaacttcttagatttgctctttcttgacatcgacct |
418 |
Q |
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||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826815 |
tctcatcggtatttcttcttcttttccatttggatggaagtccacaagattttgaagaatatttgaacttcttagatttgctctttcttgacatcgacct |
44826914 |
T |
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| Q |
419 |
tgactttgatg |
429 |
Q |
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||||||||||| |
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| T |
44826915 |
tgactttgatg |
44826925 |
T |
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