View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104A_low_270 (Length: 244)
Name: NF10104A_low_270
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104A_low_270 |
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Alignment Details
Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 7127758 - 7127620
Alignment:
| Q |
22 |
acacgagccttcacacgtgtcggatacaacgtgtcaagaacaattagagttctctgaaaatcacagtgttgatgttgatcttgtggattctacaattgtt |
121 |
Q |
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| T |
7127758 |
acacgagccttcacacgtgttggatacaacgtgtcaagaacaattagtgttctctgaaaatcacagtgttgatgttgatcttgtggattctgcaattgta |
7127659 |
T |
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| Q |
122 |
gccactgcaacttcttcgtcgctgtccctgaatttcaac |
160 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
7127658 |
gccactgcaacttcttcgtcgctgtccctgaatttcaac |
7127620 |
T |
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