View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10104A_low_336 (Length: 230)

Name: NF10104A_low_336
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10104A_low_336
NF10104A_low_336
[»] chr5 (21 HSPs)
chr5 (1-210)||(7183137-7183346)
chr5 (1-211)||(15912988-15913198)
chr5 (1-205)||(39056309-39056513)
chr5 (1-155)||(33868834-33868988)
chr5 (100-205)||(6054370-6054475)
chr5 (78-154)||(7183331-7183407)
chr5 (78-154)||(33868973-33869049)
chr5 (78-154)||(39056248-39056324)
chr5 (153-205)||(33868160-33868212)
chr5 (153-205)||(4674965-4675017)
chr5 (153-205)||(16552648-16552700)
chr5 (153-205)||(16668803-16668855)
chr5 (95-154)||(15912944-15913003)
chr5 (153-205)||(3884044-3884096)
chr5 (153-205)||(18465565-18465617)
chr5 (80-117)||(30407683-30407720)
chr5 (80-117)||(30407884-30407921)
chr5 (80-117)||(30408086-30408123)
chr5 (80-117)||(30408691-30408728)
chr5 (80-117)||(30408891-30408928)
chr5 (160-205)||(30783440-30783485)
[»] chr4 (33 HSPs)
chr4 (1-212)||(2847967-2848177)
chr4 (1-210)||(34986243-34986451)
chr4 (1-176)||(20588101-20588276)
chr4 (13-158)||(9561133-9561278)
chr4 (38-154)||(9561020-9561136)
chr4 (77-158)||(9561582-9561663)
chr4 (77-154)||(55780302-55780379)
chr4 (77-154)||(55844482-55844559)
chr4 (78-154)||(2847906-2847982)
chr4 (78-154)||(20588040-20588116)
chr4 (85-158)||(810233-810306)
chr4 (153-205)||(24686577-24686629)
chr4 (153-205)||(25574137-25574189)
chr4 (153-205)||(16298926-16298978)
chr4 (80-117)||(808744-808781)
chr4 (80-117)||(809115-809152)
chr4 (80-117)||(809486-809523)
chr4 (80-117)||(809656-809693)
chr4 (80-117)||(810027-810064)
chr4 (80-117)||(54754358-54754395)
chr4 (153-205)||(38010146-38010198)
chr4 (153-205)||(55765486-55765538)
chr4 (80-122)||(808945-808987)
chr4 (80-122)||(54757723-54757765)
chr4 (78-119)||(9560960-9561001)
chr4 (160-205)||(13635741-13635786)
chr4 (153-194)||(30357823-30357864)
chr4 (160-205)||(49492528-49492573)
chr4 (80-117)||(54756723-54756760)
chr4 (80-117)||(54756924-54756961)
chr4 (80-117)||(54757527-54757564)
chr4 (80-116)||(809316-809352)
chr4 (161-205)||(10472502-10472546)
[»] chr2 (26 HSPs)
chr2 (1-210)||(24024481-24024690)
chr2 (1-108)||(28056102-28056209)
chr2 (77-158)||(28048244-28048325)
chr2 (42-134)||(30771316-30771409)
chr2 (70-154)||(30771407-30771491)
chr2 (153-205)||(5098721-5098773)
chr2 (80-154)||(28056194-28056268)
chr2 (153-205)||(39548047-39548099)
chr2 (153-205)||(13081869-13081921)
chr2 (153-205)||(40853688-40853740)
chr2 (80-122)||(21173668-21173710)
chr2 (80-122)||(27970565-27970607)
chr2 (80-117)||(44348258-44348295)
chr2 (80-117)||(44350782-44350819)
chr2 (153-205)||(25995291-25995343)
chr2 (153-205)||(36636946-36636998)
chr2 (80-122)||(27970194-27970236)
chr2 (80-122)||(28056699-28056741)
chr2 (153-202)||(16142084-16142133)
chr2 (80-117)||(21173498-21173535)
chr2 (85-122)||(27970364-27970401)
chr2 (85-122)||(28056869-28056906)
chr2 (85-122)||(30767577-30767614)
chr2 (85-122)||(30771740-30771777)
chr2 (153-205)||(4281797-4281849)
chr2 (85-117)||(44348464-44348496)
[»] scaffold0069 (2 HSPs)
scaffold0069 (1-202)||(51367-51568)
scaffold0069 (78-154)||(51553-51629)
[»] chr7 (28 HSPs)
chr7 (1-205)||(6797242-6797446)
chr7 (1-205)||(45402727-45402931)
chr7 (14-170)||(21405900-21406055)
chr7 (42-158)||(12283282-12283398)
chr7 (42-158)||(10564153-10564269)
chr7 (42-154)||(12283395-12283507)
chr7 (42-154)||(12283504-12283616)
chr7 (75-158)||(12283079-12283162)
chr7 (78-154)||(45402666-45402742)
chr7 (64-155)||(10564457-10564548)
chr7 (77-155)||(10563830-10563908)
chr7 (64-154)||(10564266-10564356)
chr7 (153-203)||(39007658-39007708)
chr7 (78-154)||(6797182-6797257)
chr7 (153-205)||(34875494-34875546)
chr7 (153-205)||(44141260-44141312)
chr7 (64-115)||(10564592-10564643)
chr7 (78-155)||(10564648-10564725)
chr7 (153-205)||(5757391-5757443)
chr7 (64-115)||(10564401-10564452)
chr7 (80-117)||(4721019-4721056)
chr7 (153-205)||(46346725-46346777)
chr7 (80-122)||(13420428-13420470)
chr7 (80-122)||(13420629-13420671)
chr7 (160-205)||(16933260-16933305)
chr7 (160-205)||(16938643-16938688)
chr7 (153-210)||(24359871-24359928)
chr7 (152-184)||(48305261-48305293)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-202)||(1612-1813)
scaffold0460 (78-154)||(1798-1874)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-205)||(209331-209535)
scaffold0006 (90-202)||(171513-171625)
scaffold0006 (78-154)||(209520-209596)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-205)||(119207-119411)
scaffold0012 (78-154)||(119396-119472)
[»] chr3 (28 HSPs)
chr3 (1-205)||(32232996-32233200)
chr3 (1-211)||(41568830-41569038)
chr3 (78-154)||(32233185-32233261)
chr3 (77-158)||(40219300-40219381)
chr3 (77-158)||(40219501-40219582)
chr3 (77-158)||(40219702-40219783)
chr3 (77-158)||(40219903-40219984)
chr3 (1-51)||(51452934-51452984)
chr3 (158-205)||(51682016-51682063)
chr3 (153-205)||(23755290-23755342)
chr3 (153-205)||(47728393-47728445)
chr3 (158-205)||(37319474-37319521)
chr3 (156-205)||(39195120-39195169)
chr3 (153-205)||(53594973-53595025)
chr3 (80-122)||(11974935-11974977)
chr3 (153-202)||(28299961-28300010)
chr3 (153-205)||(9106272-9106324)
chr3 (153-205)||(23699332-23699384)
chr3 (153-205)||(23717787-23717839)
chr3 (153-205)||(23736243-23736295)
chr3 (153-212)||(41192359-41192418)
chr3 (80-122)||(11975105-11975147)
chr3 (80-122)||(11975275-11975317)
chr3 (80-122)||(11975445-11975487)
chr3 (160-205)||(26662554-26662599)
chr3 (160-205)||(30947927-30947972)
chr3 (160-205)||(33414029-33414074)
chr3 (153-210)||(51846789-51846846)
[»] chr1 (30 HSPs)
chr1 (1-205)||(13590472-13590676)
chr1 (1-202)||(20372213-20372406)
chr1 (47-205)||(5077351-5077509)
chr1 (90-202)||(13673899-13674011)
chr1 (1-89)||(20481214-20481302)
chr1 (77-158)||(19845812-19845893)
chr1 (78-154)||(13590661-13590737)
chr1 (78-154)||(20372391-20372467)
chr1 (78-154)||(20481287-20481363)
chr1 (153-205)||(33097410-33097462)
chr1 (153-205)||(51801742-51801794)
chr1 (153-205)||(37639346-37639398)
chr1 (153-205)||(44260523-44260575)
chr1 (158-205)||(35198195-35198242)
chr1 (153-205)||(31529674-31529726)
chr1 (153-205)||(44688619-44688671)
chr1 (80-139)||(19846071-19846130)
chr1 (80-117)||(37223273-37223310)
chr1 (80-117)||(37223613-37223650)
chr1 (80-117)||(37223783-37223820)
chr1 (80-117)||(37223953-37223990)
chr1 (161-205)||(51420350-51420394)
chr1 (159-214)||(28323347-28323402)
chr1 (161-214)||(2741032-2741085)
chr1 (80-113)||(37223447-37223480)
chr1 (80-117)||(37224123-37224160)
chr1 (160-205)||(49936953-49936998)
chr1 (160-205)||(50351808-50351853)
chr1 (153-205)||(11421599-11421651)
chr1 (165-205)||(30788353-30788393)
[»] scaffold0717 (2 HSPs)
scaffold0717 (1-212)||(7199-7410)
scaffold0717 (78-154)||(7138-7214)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-205)||(450207-450410)
scaffold0002 (78-154)||(450395-450471)
[»] chr8 (27 HSPs)
chr8 (45-210)||(44508953-44509118)
chr8 (77-158)||(17225380-17225461)
chr8 (77-158)||(40005568-40005649)
chr8 (77-158)||(40005769-40005850)
chr8 (153-205)||(2522872-2522924)
chr8 (153-205)||(40247294-40247346)
chr8 (83-158)||(40005970-40006045)
chr8 (158-205)||(10443584-10443631)
chr8 (153-205)||(12355427-12355479)
chr8 (80-122)||(17057590-17057632)
chr8 (80-122)||(17225658-17225700)
chr8 (80-122)||(17590593-17590635)
chr8 (83-133)||(40006167-40006217)
chr8 (153-210)||(9852270-9852327)
chr8 (153-214)||(13526680-13526741)
chr8 (153-214)||(13616215-13616276)
chr8 (153-210)||(34648137-34648194)
chr8 (153-196)||(23396491-23396534)
chr8 (83-117)||(40006097-40006131)
chr8 (83-133)||(40006124-40006174)
chr8 (80-117)||(17057388-17057425)
chr8 (80-117)||(17590800-17590837)
chr8 (160-205)||(30413919-30413964)
chr8 (153-205)||(15181795-15181847)
chr8 (153-205)||(15227035-15227087)
chr8 (166-214)||(28698603-28698651)
chr8 (153-201)||(30651958-30652006)
[»] chr6 (21 HSPs)
chr6 (1-184)||(7851365-7851545)
chr6 (1-205)||(32556349-32556555)
chr6 (1-158)||(18762701-18762858)
chr6 (42-154)||(18762604-18762716)
chr6 (42-154)||(18762495-18762607)
chr6 (133-210)||(27079919-27079996)
chr6 (83-154)||(32556540-32556611)
chr6 (77-149)||(28123070-28123142)
chr6 (81-154)||(7851530-7851603)
chr6 (84-158)||(28122930-28123004)
chr6 (158-203)||(16968037-16968082)
chr6 (80-117)||(22038107-22038144)
chr6 (153-210)||(30908652-30908709)
chr6 (153-205)||(18611193-18611245)
chr6 (158-205)||(4338634-4338681)
chr6 (80-139)||(28123519-28123578)
chr6 (80-122)||(15034036-15034078)
chr6 (80-117)||(28123342-28123379)
chr6 (160-205)||(31216667-31216712)
chr6 (78-154)||(18762422-18762498)
chr6 (85-117)||(22038313-22038345)
[»] scaffold0065 (6 HSPs)
scaffold0065 (12-158)||(409-555)
scaffold0065 (1-146)||(559-696)
scaffold0065 (77-158)||(21-102)
scaffold0065 (42-154)||(681-793)
scaffold0065 (78-154)||(790-865)
scaffold0065 (90-148)||(162-220)
[»] scaffold0019 (3 HSPs)
scaffold0019 (45-158)||(168514-168627)
scaffold0019 (77-158)||(168320-168401)
scaffold0019 (80-142)||(168665-168727)
[»] scaffold0104 (5 HSPs)
scaffold0104 (42-158)||(39209-39325)
scaffold0104 (77-158)||(39473-39554)
scaffold0104 (77-158)||(39850-39931)
scaffold0104 (80-149)||(39112-39181)
scaffold0104 (80-154)||(38883-38957)
[»] scaffold0050 (7 HSPs)
scaffold0050 (42-158)||(16194-16310)
scaffold0050 (49-153)||(22770-22874)
scaffold0050 (63-139)||(16106-16182)
scaffold0050 (59-155)||(22584-22680)
scaffold0050 (59-155)||(22680-22780)
scaffold0050 (60-114)||(22877-22931)
scaffold0050 (77-155)||(16511-16589)
[»] scaffold0558 (4 HSPs)
scaffold0558 (42-158)||(10636-10752)
scaffold0558 (77-158)||(10432-10513)
scaffold0558 (77-158)||(10055-10136)
scaffold0558 (80-149)||(10762-10831)
[»] scaffold0553 (1 HSPs)
scaffold0553 (77-158)||(6371-6450)
[»] scaffold0455 (3 HSPs)
scaffold0455 (77-149)||(1156-1228)
scaffold0455 (84-158)||(1016-1090)
scaffold0455 (80-139)||(1804-1863)
[»] scaffold0534 (2 HSPs)
scaffold0534 (80-122)||(5931-5973)
scaffold0534 (80-122)||(8864-8906)
[»] scaffold0023 (3 HSPs)
scaffold0023 (80-122)||(126256-126298)
scaffold0023 (80-122)||(126426-126468)
scaffold0023 (80-117)||(128579-128616)
[»] scaffold0144 (12 HSPs)
scaffold0144 (80-117)||(19721-19758)
scaffold0144 (80-117)||(28835-28872)
scaffold0144 (80-117)||(30981-31018)
scaffold0144 (80-117)||(33393-33430)
scaffold0144 (80-117)||(33903-33940)
scaffold0144 (80-117)||(34073-34110)
scaffold0144 (80-113)||(19385-19418)
scaffold0144 (80-117)||(19551-19588)
scaffold0144 (80-117)||(28665-28702)
scaffold0144 (80-117)||(33563-33600)
scaffold0144 (80-117)||(34243-34280)
scaffold0144 (80-113)||(34583-34616)
[»] scaffold0581 (1 HSPs)
scaffold0581 (80-117)||(310-347)


Alignment Details
Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 7183346 - 7183137
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7183346 attgtgtaatggtttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggt 7183247  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  7183246 ttaatgattttgatagtcttctatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgcagtgtgcataaggaactgacttatgcataat 7183147  T
Q  201 aacttctccc 210  Q
    ||||||||||    
T  7183146 aacttctccc 7183137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 15912988 - 15913198
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  15912988 attgtgtaatggtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacactaaaattattactgaaaccataattatggt 15913087  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||| ||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15913088 ttaatgattttgatagtcttctatgagaaaccaaaataattgtatgatggttttgtaaagtgtttatgcaggatgcataaggaactgacttatgcataat 15913187  T
Q  201 aacttctcccc 211  Q
    |||||||||||    
T  15913188 aacttctcccc 15913198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 39056309 - 39056513
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| |||||||||||||| |||||||| ||||| |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  39056309 attgtgtaatggtttttaatgaaatgattattgtgacatggttttaaataacgattaagatggtatacactgaaattattactgaaaccataattatggt 39056408  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| || ||| |||||||||||    
T  39056409 ttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatggttttgtgaagtgtttaagcagggtgcataagaaaatgatttatgcataat 39056508  T
Q  201 aactt 205  Q
    |||||    
T  39056509 aactt 39056513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 33868988 - 33868834
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33868988 attgtgtaatgatttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggt 33868889  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttg 155  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33868888 ttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatgattttg 33868834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 205
Target Start/End: Complemental strand, 6054475 - 6054370
Alignment:
Q  100 tttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataa 199  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| || || ||||  ||| |||||| | || ||||||||||||||    
T  6054475 tttaatggttttgattgtcttctatgagaaaccaaaataattgtctaataattttgtgaaatgcttatataggatgcataggaaaatgacttatgcataa 6054376  T
Q  200 taactt 205  Q
    | ||||    
T  6054375 tgactt 6054370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 7183407 - 7183331
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  7183407 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 7183331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 33869049 - 33868973
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||||| || |||||||||||||||||||||||||| | || |||||||| |||||||| ||||||||||    
T  33869049 attactgaaaccaaaagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 33868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 39056248 - 39056324
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  39056248 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 39056324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 33868212 - 33868160
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33868212 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 33868160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 4675017 - 4674965
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  4675017 ttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactt 4674965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 16552648 - 16552700
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  16552648 ttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcataataactt 16552700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 16668803 - 16668855
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  16668803 ttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataactt 16668855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 15912944 - 15913003
Alignment:
Q  95 tatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  15912944 tatggtttaatggttttgatagtcttgtatgtgaaaccaatataattgtgtaatggtttt 15913003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 3884044 - 3884096
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  3884044 ttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 3884096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 18465565 - 18465617
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||| ||||||| ||| || |||||||||||||||||    
T  18465565 ttgtgaagtgtttatgcaggatgcataatgaaatgtcttatgcataataactt 18465617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 30407683 - 30407720
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  30407683 tactgaaaccataagtatggtataatggttttgatagt 30407720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 30407884 - 30407921
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  30407884 tactgaaaccataagtatggtataatggttttgatagt 30407921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 30408086 - 30408123
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  30408086 tactgaaaccataagtatggtataatggttttgatagt 30408123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 30408691 - 30408728
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  30408691 tactgaaaccataagtatggtataatggttttgatagt 30408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 30408891 - 30408928
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  30408891 tactgaaaccataagtatggtataatggttttgatagt 30408928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 30783485 - 30783440
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  30783485 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 30783440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 2847967 - 2848177
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  2847967 attgtgtaatgatttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatg-t 2848065  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2848066 ttaatggttttgatagtcttctatgagaaactaaaataattgtctaatggttttgtaaagtatttatgcagggtgcataaggaactgacttatgcataat 2848165  T
Q  201 aacttctcccca 212  Q
    ||||||||||||    
T  2848166 aacttctcccca 2848177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 34986451 - 34986243
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34986451 attgtgtaatggtttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggt 34986352  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| | |||||||||||||||||    
T  34986351 ttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgtagggtgcataatg-actgacttatgcataat 34986253  T
Q  201 aacttctccc 210  Q
    | ||||||||    
T  34986252 atcttctccc 34986243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20588101 - 20588276
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| |    
T  20588101 attgtgtaatgatttttaataaaattattattgttacatggttttaaataatgattaagatgttatacactgaaactattagtgaaaccataattatgat 20588200  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgc 176  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||  |||||| |||||||||| ||||||||    
T  20588201 ttaatggttttgatagtcttctatgagaaaccaaaataattatcaaatagttttgtgaagtgtttatacagggtgc 20588276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 9561133 - 9561278
Alignment:
Q  13 tttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttg 112  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  9561133 ttttaaatgaaattattattggtacatgattttaaataatgattaacatgttatacactaaaattattactgaaaccataagtatgatttaatggttttg 9561232  T
Q  113 atagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||| |||||  || ||||||||||||||||||||||| ||||||||    
T  9561233 ataatcttcaatgtgaaaccaaaataattgtctaatggttttgtaa 9561278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 9561020 - 9561136
Alignment:
Q  38 atgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaat 137  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||| | |  |||||||||||    
T  9561020 atgattttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatgattttgatattcttgtatatgaaaccaaaat 9561119  T
Q  138 aattgtctaatgatttt 154  Q
    |||||||||||| ||||    
T  9561120 aattgtctaatgttttt 9561136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 9561582 - 9561663
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| || |||| |||||||||||||||||  ||||||||    
T  9561582 tattactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaatcaaaataattgtctaatagttttgtaa 9561663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 55780379 - 55780302
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||    
T  55780379 tattactgaaaccataagtatggtttaatggttttgatagtattctatgtgaaaccaaactaattgtctaatggtttt 55780302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 55844559 - 55844482
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||    
T  55844559 tattactgaaaccataagtatggtttaatggttttgatagtattctatgtgaaaccaaactaattgtctaatggtttt 55844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 2847906 - 2847982
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||||||||    
T  2847906 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 2847982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 20588040 - 20588116
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||||||||    
T  20588040 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 20588116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 810233 - 810306
Alignment:
Q  85 aaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||| ||||||||||||||||||||||| | || || ||||||||| ||||||||||||| ||||||||    
T  810233 aaaccataagtatggtttaatggttttgatagtgtcctatgtgaaaccaaactaattgtctaatggttttgtaa 810306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 24686629 - 24686577
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24686629 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 24686577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 25574137 - 25574189
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25574137 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 25574189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 16298978 - 16298926
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  16298978 ttgtgaagtgattatgcagggtgcataaggaaatgacttatgcataataactt 16298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 808744 - 808781
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  808744 tactgaaaccataagtatggtttaatggttttgatagt 808781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 809115 - 809152
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  809115 tactgaaaccataagtatggtttaatggttttgatagt 809152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 809486 - 809523
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  809486 tactgaaaccataagtatggtttaatggttttgatagt 809523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 809656 - 809693
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  809656 tactgaaaccataagtatggtttaatggttttgatagt 809693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 810027 - 810064
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  810027 tactgaaaccataagtatggtttaatggttttgatagt 810064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 54754395 - 54754358
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  54754395 tactgaaaccataagtatggtttaatggttttgatagt 54754358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 38010198 - 38010146
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||  |||||||    
T  38010198 ttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataactt 38010146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 55765538 - 55765486
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  55765538 ttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 55765486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 808945 - 808987
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||    
T  808945 tactaaaaccataagtatggtttaatggttttgatagtgttct 808987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 54757765 - 54757723
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| |||||| |||||||||||||||| ||||    
T  54757765 tactgaaaccataagtatggtataatggttttgatagtgttct 54757723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 9560960 - 9561001
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtct 119  Q
    |||||||||| | ||| |||||||||||||||||||||||||    
T  9560960 attactgaaatcgtaaatatggtttaatggttttgatagtct 9561001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 13635741 - 13635786
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  13635741 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 13635786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 30357864 - 30357823
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatg 194  Q
    |||| ||||||||||||| ||||||||||||| |||||||||    
T  30357864 ttgtgaagtgtttatgcacggtgcataaggaaatgacttatg 30357823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 49492528 - 49492573
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  49492528 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 49492573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 54756760 - 54756723
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  54756760 tactgaaaccataagtatggtataatggttttgatagt 54756723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 54756961 - 54756924
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  54756961 tactgaaaccataagtatggtataatggttttgatagt 54756924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 54757564 - 54757527
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  54757564 tactgaaaccataagtatggtataatggttttgatagt 54757527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 809316 - 809352
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatag 116  Q
    |||||||||||||| |||||||||||| |||||||||    
T  809316 tactgaaaccataagtatggtttaatgattttgatag 809352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 10472546 - 10472502
Alignment:
Q  161 tgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||||||| ||||||||||||| |||||||||||  |||||||    
T  10472546 tgtttatgcacggtgcataaggaaatgacttatgcaccataactt 10472502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 24024481 - 24024690
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24024481 attgtgtaatggtttttaatgaaattattattgttacatagttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggt 24024580  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  24024581 ttaatggttttgataatcttctatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgcatggtgcataaggaattgacttatgcataat 24024680  T
Q  201 aacttctccc 210  Q
    ||||||||||    
T  24024681 aacttctccc 24024690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28056209 - 28056102
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||| ||||||||||||| || ||||||  |||||||||||||||| || ||||||| |||||||||||||||||| ||||  |||||    
T  28056209 attgtgtaatggttttaaatgaaattattaatggtacatgggtttaaataatgattaaaatattatacactgaaattattactgaaacaataagcatggt 28056110  T
Q  101 ttaatggt 108  Q
    ||||||||    
T  28056109 ttaatggt 28056102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 28048325 - 28048244
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||| |||||||||| || ||||||||    
T  28048325 tattactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctagtggttttgtaa 28048244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 30771409 - 30771316
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattatt-actgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaa 134  Q
    |||| ||||||||||||||||||||||| |||||||||  ||||||||||||| ||||| ||||||||||||| |||||||  || ||||||||    
T  30771409 tttttaataatgattaagatgttatacactgaaattatagactgaaaccataagtatggcttaatggttttgacagtcttcaatgtgaaaccaa 30771316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 30771491 - 30771407
Alignment:
Q  70 ttgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||| |||||| ||||||||| ||||| ||||||||||||| |||||||  || ||||||||||||||||||||||| ||||    
T  30771491 ttgaaatcattactaaaaccataagtatggcttaatggttttgacagtcttcaatgtgaaaccaaaataattgtctaatggtttt 30771407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 5098773 - 5098721
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5098773 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 5098721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 28056268 - 28056194
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||  ||||||| |||||||| ||||| ||||    
T  28056268 tactgaaaccataagtatggtttaatggttttgatagtcttgtatgtaaaaccaatataattgtgtaatggtttt 28056194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 39548099 - 39548047
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39548099 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgtataataactt 39548047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 13081869 - 13081921
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  13081869 ttgtgaagtgtttatgtagggtgcataatgaaatgacttatgcataataactt 13081921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 40853688 - 40853740
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||| ||||||||||| || |||||||||||||||||    
T  40853688 ttgtgaagtgtttatgcaggatgcataaggaaatggcttatgcataataactt 40853740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 21173668 - 21173710
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  21173668 tactgaaaccataagtatggtttaatggttttgatagtgttct 21173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 27970607 - 27970565
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  27970607 tactgaaaccataagtatggtttaatggttttgatagtgttct 27970565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 44348258 - 44348295
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44348258 tactgaaaccataagtatggtttaatggttttgatagt 44348295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 44350782 - 44350819
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44350782 tactgaaaccataagtatggtttaatggttttgatagt 44350819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 25995343 - 25995291
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||| ||||||||| |||||||||||| || |||||||||||||||||    
T  25995343 ttgtgaagtatttatgcagagtgcataaggaaatgtcttatgcataataactt 25995291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 36636946 - 36636998
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||| ||||| |||||| || ||||||||||||||||||||    
T  36636946 ttgtgaagtgtttatgtagggtacataagaaaatgacttatgcataataactt 36636998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 27970236 - 27970194
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  27970236 tactgaaaccataaatatggtttaatggttttgacagtgttct 27970194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 28056741 - 28056699
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  28056741 tactgaaaccataaatatggtttaatggttttgacagtgttct 28056699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 16142084 - 16142133
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataa 202  Q
    |||| |||||||||||||| |||||||||||| || ||| ||||||||||    
T  16142084 ttgtgaagtgtttatgcagcgtgcataaggaaatggcttgtgcataataa 16142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 21173498 - 21173535
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  21173498 tactgaaaccataagtatgatttaatggttttgatagt 21173535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 27970401 - 27970364
Alignment:
Q  85 aaaccataattatggtttaatggttttgatagtcttct 122  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  27970401 aaaccataagtatggtttaatggttttgatagtgttct 27970364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 28056906 - 28056869
Alignment:
Q  85 aaaccataattatggtttaatggttttgatagtcttct 122  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  28056906 aaaccataagtatggtttaatggttttgatagtgttct 28056869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 30767614 - 30767577
Alignment:
Q  85 aaaccataattatggtttaatggttttgatagtcttct 122  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  30767614 aaaccataagtatggtttaatggttttgatagtgttct 30767577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 30771777 - 30771740
Alignment:
Q  85 aaaccataattatggtttaatggttttgatagtcttct 122  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  30771777 aaaccataagtatggtttaatggttttgatagtgttct 30771740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 4281797 - 4281849
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||| ||| || ||||||||| || |||||||||||||||||    
T  4281797 ttgtgaagtgtttatacagagtacataaggaaatgtcttatgcataataactt 4281849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 44348464 - 44348496
Alignment:
Q  85 aaaccataattatggtttaatggttttgatagt 117  Q
    ||||||||| |||||||||||||||||||||||    
T  44348464 aaaccataagtatggtttaatggttttgatagt 44348496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 166; Significance: 5e-89; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 51568 - 51367
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51568 attgtgtaatggtttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggt 51469  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||    
T  51468 ttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataat 51369  T
Q  201 aa 202  Q
    ||    
T  51368 aa 51367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 51629 - 51553
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||| |||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  51629 attaccgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 51553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 6797242 - 6797446
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  6797242 attgtgtaatggtttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaactattactgaaaccataattatggt 6797341  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  6797342 ttaatggttttgatagtcttttatgagaaaccaaaataattgtctaataattttgtgaagtgtttatgcaggatgcataaggaaatgacttatgcataat 6797441  T
Q  201 aactt 205  Q
    |||||    
T  6797442 aactt 6797446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 45402727 - 45402931
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  45402727 attgtgtaatgatttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattattgaaaccataattatggt 45402826  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||    
T  45402827 ttaatggttttgatagtcttttatgagaaaccaaaataatagtctaatggttttgtaaagtgtttatgctgggtgcataaggaaataacttatgcataat 45402926  T
Q  201 aactt 205  Q
    |||||    
T  45402927 aactt 45402931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 21405900 - 21406055
Alignment:
Q  14 ttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttga 113  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  21405900 ttttaatgaaattattattattacatgactttaaataatgattaagatgttatacactgaaattattactgaaatcataattatggtttaatggttttga 21405999  T
Q  114 tagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgca 170  Q
    ||||||||| | |||||||||||||||| | ||||  |||||| |||||||||||||    
T  21406000 tagtcttctataagaaaccaaaataattat-taatagttttgtgaagtgtttatgca 21406055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 12283398 - 12283282
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||  || |||||||||||||||    
T  12283398 ttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatgatttaatggttttgacagtcttcaatgtgaaaccaaaataatt 12283299  T
Q  142 gtctaatgattttgtaa 158  Q
    |||||||| ||||||||    
T  12283298 gtctaatggttttgtaa 12283282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 10564269 - 10564153
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||  ||||||||||||| ||||| |  || |||||||||||||||    
T  10564269 ttttaaataatgattaaaatgttatacactgaaattattactgaaaccataagtatgacttaatggttttgacagtctacaatgtgaaaccaaaataatt 10564170  T
Q  142 gtctaatgattttgtaa 158  Q
    |||||||| ||||||||    
T  10564169 gtctaatggttttgtaa 10564153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 12283507 - 12283395
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| ||| || | || |||||||| ||||||    
T  12283507 ttttaaataatgattaagatgttatacactgaaattattactgaaaccataagtatggtttaatgattttgacagtattgtatgtgaaaccaagataatt 12283408  T
Q  142 gtctaatgatttt 154  Q
    || ||||| ||||    
T  12283407 gtgtaatggtttt 12283395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 12283616 - 12283504
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||| || | || |||||||| ||||||    
T  12283616 ttttaaataatgattaagatgttatacactgaaattattaccgaaaccataagtatggtttaatggttttgacagtattgtatgtgaaaccaagataatt 12283517  T
Q  142 gtctaatgatttt 154  Q
    || ||||| ||||    
T  12283516 gtgtaatggtttt 12283504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 12283162 - 12283079
Alignment:
Q  75 attattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    |||||||||||||| |||| ||||||||||||||||||||||| |||| || |||||||| |||||||||||||| ||||||||    
T  12283162 attattactgaaactataagtatggtttaatggttttgatagtgttctatgtgaaaccaacataattgtctaatggttttgtaa 12283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 45402666 - 45402742
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||||||||    
T  45402666 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 45402742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 10564548 - 10564457
Alignment:
Q  64 tatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttg 155  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| || | || ||||||| ||  ||||| ||||| |||||    
T  10564548 tatacactgaaattatgactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccataaatattgtgtaatggttttg 10564457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 10563908 - 10563830
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttg 155  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||   || |||||||| |||||||| |||||||||||    
T  10563908 tattactgaaaccataagtatggtttaacggttttgatagtattaaatgtgaaaccaagataattgtgtaatgattttg 10563830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 10564356 - 10564266
Alignment:
Q  64 tatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||| |||||||||| |||||||||||| |||| |||||||||||||||||| || | || |||||||| |||| ||| ||||| ||||    
T  10564356 tatacactgaaattatttctgaaaccataagtatgatttaatggttttgatagtattgtatgtgaaaccaagataaatgtgtaatggtttt 10564266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 39007658 - 39007708
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataac 203  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  39007658 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataac 39007708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 6797182 - 6797257
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||||||| | ||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  6797182 attactgaaaccatagt-atggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 6797257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 34875546 - 34875494
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  34875546 ttgtgaagtgtttatgcagggtgcataaggaaatggcttatgcataataactt 34875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 44141260 - 44141312
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  44141260 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcatgataactt 44141312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 10564643 - 10564592
Alignment:
Q  64 tatacattgaaattattactgaaaccataattatggtttaatggttttgata 115  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  10564643 tatacactgaaattatgactgaaaccataagtatggtttaatggttttgata 10564592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 10564725 - 10564648
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttg 155  Q
    |||||||||||||||| ||||||||||||||||||||||| || | || ||||||| ||  ||||| ||||| |||||    
T  10564725 attactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccataaatattgtgtaatggttttg 10564648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 5757443 - 5757391
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||| ||||||||||||| || |||||||||||||||||    
T  5757443 ttgtgaagtgtttatgcacggtgcataaggaaatgtcttatgcataataactt 5757391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 10564452 - 10564401
Alignment:
Q  64 tatacattgaaattattactgaaaccataattatggtttaatggttttgata 115  Q
    |||||| ||||||||| || |||||||||| |||||||||||||||||||||    
T  10564452 tatacactgaaattatgaccgaaaccataagtatggtttaatggttttgata 10564401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 4721019 - 4721056
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4721019 tactgaaaccataagtatggtttaatggttttgatagt 4721056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 46346725 - 46346777
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||| |||| |||||||| || ||||||||||||||||||||    
T  46346725 ttgtgaagtgtttatacaggatgcataagaaaatgacttatgcataataactt 46346777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 13420428 - 13420470
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||    
T  13420428 tactgaaaccataagtatggttgaatggttttgatagtgttct 13420470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 13420629 - 13420671
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| |||||| |||||||||||||||| ||||    
T  13420629 tactgaaaccataagtatggtgtaatggttttgatagtgttct 13420671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 16933260 - 16933305
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  16933260 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 16933305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 16938643 - 16938688
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  16938643 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 16938688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 24359928 - 24359871
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccc 210  Q
    |||| ||||||| ||||| ||||||||||||| |||||||||||  ||||||| ||||    
T  24359928 ttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataacttttccc 24359871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 48305293 - 48305261
Alignment:
Q  152 tttgtaaagtgtttatgcagggtgcataaggaa 184  Q
    ||||||||||||||||||| |||||||||||||    
T  48305293 tttgtaaagtgtttatgcacggtgcataaggaa 48305261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 162; Significance: 1e-86; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1813 - 1612
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1813 attgtgtaatggtttttaatgaaagtattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatggt 1714  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  1713 ttaatggttttgatattcttttatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataat 1614  T
Q  201 aa 202  Q
    ||    
T  1613 aa 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 1874 - 1798
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  1874 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 1798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 161; Significance: 5e-86; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 209535 - 209331
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  209535 attgtgtaatggtttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaacaataattatggt 209436  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| || |||||||||||||||    
T  209435 ttaatggttttgatagtcttatatgagaaaccaaaataattgtctaattgttttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataat 209336  T
Q  201 aactt 205  Q
    |||||    
T  209335 aactt 209331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 171625 - 171513
Alignment:
Q  90 ataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgac 189  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| ||||    
T  171625 ataattatggtttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatacagggtgcataaggaaatgac 171526  T
Q  190 ttatgcataataa 202  Q
    |||||||||||||    
T  171525 ttatgcataataa 171513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 209596 - 209520
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| | || |||||||| |||||||| ||||| ||||    
T  209596 attactgaaaccataagtatagtttaatggttttgataatcttgtatgtgaaaccaagataattgtgtaatggtttt 209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 119411 - 119207
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  119411 attgtgtaatggtttttaatgaaattattattgttacatagttttaaataatgattaagatgttatatactgaaattattactgaaaccataattatggt 119312  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||||||| |||||    
T  119311 ttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgcagggtgcatatagaaatgacttatgtataat 119212  T
Q  201 aactt 205  Q
    |||||    
T  119211 aactt 119207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 119472 - 119396
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  119472 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 119396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32233200 - 32232996
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |  ||||||||| ||||| |||||||||||    
T  32233200 attgtgtaatgatttttaatgaaattattattgttacatggttttaaataatgattaagatgatatacacttgaattattaccgaaactataattatggt 32233101  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  32233100 ttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataat 32233001  T
Q  201 aactt 205  Q
    |||||    
T  32233000 aactt 32232996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 41569038 - 41568830
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgat----taagatgttatacattgaaattattactgaaaccataatta 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||||||| ||||||    
T  41569038 attgtgtaatggtttttaatgaaattattattgttacatgattttaaataatgatcgattaagatgttatacattaaaattattactgaaaccgtaatta 41568939  T
Q  97 tggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgca 196  Q
    |||||||||| ||||||||||||||| |||||||||      ||||||||||| |||||| |||| |||||||| ||||||||||||| |||||||||||    
T  41568938 tggtttaatgattttgatagtcttctatgagaaacc------attgtctaatggttttgtgaagtatttatgcatggtgcataaggaattgacttatgca 41568845  T
Q  197 taataacttctcccc 211  Q
    |||||||||||||||    
T  41568844 taataacttctcccc 41568830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 32233261 - 32233185
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||||||||    
T  32233261 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttt 32233185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 40219300 - 40219381
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||    
T  40219300 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 40219501 - 40219582
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||    
T  40219501 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 40219702 - 40219783
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||    
T  40219702 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 40219903 - 40219984
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||    
T  40219903 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40219984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51452984 - 51452934
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataa 51  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  51452984 attgtgtaatggtttttaatgaaattattattgttacatgattttaaataa 51452934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 51682016 - 51682063
Alignment:
Q  158 aagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51682016 aagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 51682063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 23755342 - 23755290
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  23755342 ttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataactt 23755290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 47728445 - 47728393
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  47728445 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataactt 47728393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 37319474 - 37319521
Alignment:
Q  158 aagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  37319474 aagtgtttatgcagggtgcataagaaaatgacttatgcataataactt 37319521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 39195120 - 39195169
Alignment:
Q  156 taaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  39195120 taaagtgttcatgcagggtgcatgaggaaatgacttatgcataataactt 39195169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 53595025 - 53594973
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||||||||||||| || || |||||||||||||||||    
T  53595025 ttgtgaagtgtttatgcagggtgcataagaaaatggcttatgcataataactt 53594973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 11974977 - 11974935
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  11974977 tactgaaaccataagtatggtttaatggttttgatagtgttct 11974935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 28299961 - 28300010
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataa 202  Q
    |||| ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  28299961 ttgtgaagtgtttatgcatggtacataaggaaatgacttatgcataataa 28300010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 9106324 - 9106272
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  9106324 ttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 9106272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 23699384 - 23699332
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||||||| ||||| || || |||||||||||||||||    
T  23699384 ttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataactt 23699332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 23717839 - 23717787
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||||||| ||||| || || |||||||||||||||||    
T  23717839 ttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataactt 23717787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 23736295 - 23736243
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||||||| ||||| || || |||||||||||||||||    
T  23736295 ttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataactt 23736243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 41192359 - 41192418
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctcccca 212  Q
    |||| ||||||||||| | ||||||||||||| |||||||||||  ||||||| ||||||    
T  41192359 ttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataacttttcccca 41192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 11975147 - 11975105
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| |||| |||||||||||||||||| ||||    
T  11975147 tactgaaaccataagtatgatttaatggttttgatagtgttct 11975105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 11975317 - 11975275
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||    
T  11975317 tactgaaactataagtatggtttaatggttttgatagtgttct 11975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 11975487 - 11975445
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| |||||| |||||||||||||||| ||||    
T  11975487 tactgaaaccataagtatggtataatggttttgatagtgttct 11975445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 26662554 - 26662599
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| || |||||||| ||||||||    
T  26662554 gtgtttatgcacggtgcataaggaaatggcttatgcacaataactt 26662599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 30947927 - 30947972
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  30947927 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 30947972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 33414029 - 33414074
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  33414029 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 33414074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 51846789 - 51846846
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccc 210  Q
    |||| ||||||||||||| ||||||||||||| || ||||||||  ||||||| ||||    
T  51846789 ttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttccc 51846846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 13590676 - 13590472
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| |||| |||||||||||||    
T  13590676 attgtgtaatgatttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactcaaattattattgaacccataattatggt 13590577  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||||||| | ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13590576 ttaatggttttgatagtcttatatgagagaccaaaataattgtttaatggttttgtaaagtgtttatgcagggtgcataaggaaatgacttatgcataat 13590477  T
Q  201 aactt 205  Q
    |||||    
T  13590476 aactt 13590472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20372406 - 20372213
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||      
T  20372406 attgtgtaatggtttttaatgaaattattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaaccataattatg-- 20372309  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
          |||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||    
T  20372308 ------gttttgatagtcttatatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataat 20372215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 5077351 - 5077509
Alignment:
Q  47 aataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtcta 146  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5077351 aataatgattaagatgttatacactgaaattattactgaaaccatacttatggtttaatggttttgatagtcttctatgagaaaccaaaataattgtcta 5077450  T
Q  147 atgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  5077451 atgattttgtgaagtgcttatgcagggcgcataaggaaatgacttatgcataataactt 5077509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 13674011 - 13673899
Alignment:
Q  90 ataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgac 189  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| ||||    
T  13674011 ataattatggtttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatggttttgtgaagtgtttatacagggtgcataaggaaatgac 13673912  T
Q  190 ttatgcataataa 202  Q
    |||||||||||||    
T  13673911 ttatgcataataa 13673899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20481302 - 20481214
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaacc 89  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  20481302 attgtgtaatggtttttaatgaaagtattattgttacatggttttaaataatgattaagatgttatacactgaaattattactgaaacc 20481214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 19845893 - 19845812
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||||||    
T  19845893 tattacagaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 19845812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 13590737 - 13590661
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||| ||||||||||||||||||||| | || ||||| || |||||||| ||||||||||    
T  13590737 attactgaaaccataagtatgatttaatggttttgatagtcttgtatgtgaaacgaagataattgtgtaatgatttt 13590661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 20372467 - 20372391
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||| |||||||||| |||||||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  20372467 attaccgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 20372391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 20481363 - 20481287
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| |||||||||||||||||||||||||| | ||  ||||||| |||||||| ||||| ||||    
T  20481363 attactgaaaccataagtatggtttaatggttttgatagtcttgtatgtaaaaccaagataattgtgtaatggtttt 20481287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 33097462 - 33097410
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33097462 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 33097410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 51801742 - 51801794
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51801742 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 51801794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 37639398 - 37639346
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  37639398 ttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataactt 37639346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 44260575 - 44260523
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  44260575 ttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactt 44260523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 35198195 - 35198242
Alignment:
Q  158 aagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  35198195 aagtgtttatgcagggtgcataaggaaatgtcttatgcataataactt 35198242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 31529674 - 31529726
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||| ||||||||||||| || |||||||||||||||||    
T  31529674 ttgtgaagtgtttatgcatggtgcataaggaaatggcttatgcataataactt 31529726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 44688619 - 44688671
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  44688619 ttgtgaagtgtttatgcagcgtgcataaggaaatgacttatgcatgataactt 44688671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 19846130 - 19846071
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataa 139  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||  ||||||| ||||    
T  19846130 tactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccaagataa 19846071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 37223310 - 37223273
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  37223310 tactgaaaccataagtatggtttaatggttttgatagt 37223273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 37223650 - 37223613
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  37223650 tactgaaaccataagtatggtttaatggttttgatagt 37223613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 37223820 - 37223783
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  37223820 tactgaaaccataagtatggtttaatggttttgatagt 37223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 37223990 - 37223953
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  37223990 tactgaaaccataagtatggtttaatggttttgatagt 37223953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 51420394 - 51420350
Alignment:
Q  161 tgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||    
T  51420394 tgtttatgcaggatgcataaagaattgacttatgcataataactt 51420350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 28323347 - 28323402
Alignment:
Q  159 agtgtttatgcagggtgcataaggaactgacttatgcataataacttctccccaaa 214  Q
    |||||||||| |||||||||||  || |||||||||||||||||||| | ||||||    
T  28323347 agtgtttatggagggtgcataaaaaaatgacttatgcataataacttttgcccaaa 28323402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 2741085 - 2741032
Alignment:
Q  161 tgtttatgcagggtgcataaggaactgacttatgcataataacttctccccaaa 214  Q
    ||||||||||| || ||||| ||| ||||||||||||||||||||  |||||||    
T  2741085 tgtttatgcagagtacataaagaaatgacttatgcataataactttaccccaaa 2741032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 37223480 - 37223447
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttga 113  Q
    |||||||||||||| |||||||||||||||||||    
T  37223480 tactgaaaccataagtatggtttaatggttttga 37223447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 37224160 - 37224123
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  37224160 tactgaaaccataagtatggtttaatgattttgatagt 37224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 49936953 - 49936998
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  49936953 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 49936998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 50351853 - 50351808
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  50351853 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 50351808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 11421651 - 11421599
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||| ||||||||||||| ||| |||||||  |||||||    
T  11421651 ttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataactt 11421599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 30788393 - 30788353
Alignment:
Q  165 tatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||||  ||||||||||| ||||||||||||||||||||    
T  30788393 tatgcagactgcataaggaaatgacttatgcataataactt 30788353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 7199 - 7410
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| |    
T  7199 attgtgtaatggtttttaataaaattattattgttacatggttttaaatagtgattaagatgttatacactgaaattattagtgaaaccataattatgat 7298  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||||||||||||| ||||| |||||||||||||||||| || |||| |||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  7299 ttaatggttttgatagccttctatgagaaaccaaaataattatcaaatggttttgtgaagtgtttatgcagggtgcataaggatctgatttatgcataat 7398  T
Q  201 aacttctcccca 212  Q
    ||||||||||||    
T  7399 aacttctcccca 7410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 7138 - 7214
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| ||||||||||| |||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  7138 attactgaaaccataagtatggtttaattgttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 7214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 450410 - 450207
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  450410 attgtgtaatggtttttaatgaaattattattgttacattgttttaaataatgattaagatgttatacactaaaattattactgaa-ccataattatggt 450312  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataat 200  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||| |||| |||||||| |||||||||||||||    
T  450311 ttaatgattttgatagtcttctatgagaaaccaaaataattgtctaatggttttatgaagtgtttatgcaaggtgtataaggaaatgacttatgcataat 450212  T
Q  201 aactt 205  Q
    |||||    
T  450211 aactt 450207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 450471 - 450395
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||| ||||| |||| ||||||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  450471 attactgaaatcataagtatgatttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 450395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 44508953 - 44509118
Alignment:
Q  45 taaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtc 144  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  44508953 taaataatgattaagatgttatacactgaaattattattgaaaccataattatggtttaatggttttgatagtcttctatgagaaatcaaaataattgtc 44509052  T
Q  145 taatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccc 210  Q
    ||||| |||||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  44509053 taatggttttgtgaagtgtttctacagggtgcatatggaactgacttatgcataataacttctccc 44509118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 17225461 - 17225380
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||||||    
T  17225461 tattacagaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 17225380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 40005649 - 40005568
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||    
T  40005649 tattactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40005568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 40005850 - 40005769
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||||| |||||||||||||| | |||| || ||||||||| |||| |||||||| ||||||||    
T  40005850 tattactgaaaccataagtatggtctaatggttttgatactgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40005769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 2522924 - 2522872
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2522924 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 2522872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 40247294 - 40247346
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40247294 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactt 40247346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 40006045 - 40005970
Alignment:
Q  83 tgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||| |||||| |||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||    
T  40006045 tgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatggttttgtaa 40005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 10443584 - 10443631
Alignment:
Q  158 aagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  10443584 aagtgtttatgcagggtgcataaggaaatggcttatgcataataactt 10443631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 12355479 - 12355427
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||||||||||||| || |||||||||| |||||||||    
T  12355479 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcgtaataactt 12355427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 17057590 - 17057632
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  17057590 tactgaaaccataagtatggtttaatggttttgatagtgttct 17057632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 17225700 - 17225658
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  17225700 tactgaaaccataagtatggtttaatggttttgatagtgttct 17225658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 17590635 - 17590593
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  17590635 tactgaaaccataagtatggtttaatggttttgatagtgttct 17590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 40006217 - 40006167
Alignment:
Q  83 tgaaaccataattatggtttaatggttttgatagtcttctgtgagaaacca 133  Q
    ||||||||||| ||||||||||||||||||||||| |||| || |||||||    
T  40006217 tgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaacca 40006167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 9852327 - 9852270
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccc 210  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||  ||||||| ||||    
T  9852327 ttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttccc 9852270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 13526680 - 13526741
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccccaaa 214  Q
    |||| |||||||||||||| || ||||||||| || |||||||||||||||||  |||||||    
T  13526680 ttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataactttgccccaaa 13526741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 13616215 - 13616276
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccccaaa 214  Q
    |||| |||||||||||||| || ||||||||| || |||||||||||||||||  |||||||    
T  13616215 ttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataactttgccccaaa 13616276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 34648137 - 34648194
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccc 210  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||  ||||||| ||||    
T  34648137 ttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttccc 34648194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 23396534 - 23396491
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgca 196  Q
    |||||||||||||||||| ||||||||||||| || ||||||||    
T  23396534 ttgtaaagtgtttatgcacggtgcataaggaaatggcttatgca 23396491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 40006131 - 40006097
Alignment:
Q  83 tgaaaccataattatggtttaatggttttgatagt 117  Q
    ||||||||||| |||||||||||||||||||||||    
T  40006131 tgaaaccataagtatggtttaatggttttgatagt 40006097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 40006174 - 40006124
Alignment:
Q  83 tgaaaccataattatggtttaatggttttgatagtcttctgtgagaaacca 133  Q
    ||||||||||| |||||| |||||||||||||||| |||| || |||||||    
T  40006174 tgaaaccataagtatggtgtaatggttttgatagtgttctatgtgaaacca 40006124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 17057388 - 17057425
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  17057388 tactgaaaccataagtatggttgaatggttttgatagt 17057425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 17590837 - 17590800
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  17590837 tactgaaaccataagtatggttgaatggttttgatagt 17590800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 30413964 - 30413919
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  30413964 gtgtttatgcacggtgcataaggaaatgacttatgcagcataactt 30413919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 15181847 - 15181795
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||||||||||||||||     ||||||||||||||||    
T  15181847 ttgtgaagtgtttatgcagggtgcataaggaaacatattatgcataataactt 15181795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 15227087 - 15227035
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||| ||||||||||| ||||||||||||| | |||||||||  |||||||    
T  15227087 ttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataactt 15227035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 28698603 - 28698651
Alignment:
Q  166 atgcagggtgcataaggaactgacttatgcataataacttctccccaaa 214  Q
    |||||||||||||||| || || |||||||||||||||||  |||||||    
T  28698603 atgcagggtgcataagaaaatggcttatgcataataactttgccccaaa 28698651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 30652006 - 30651958
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataata 201  Q
    |||| ||||||||||||||||||||||||||| |   ||||||||||||    
T  30652006 ttgtgaagtgtttatgcagggtgcataaggaaatagattatgcataata 30651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 7851545 - 7851365
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  7851545 attgtgtaatgatttttaatgaaattattatttttacatggttttaaataatgattaagatgt---acattgaaattattactgaaaccataattatggt 7851449  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaa 184  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||    
T  7851448 ttaatggttttgatagtcttctatgagaaaccaaaataattttctaatggttttgtgacgtgtttatgcagggtgcatatggaa 7851365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32556555 - 32556349
Alignment:
Q  1 attgtgtaat-agtttttaatgaaattattattgttacatgattttaaataatgattaagat-gttatacattgaaattattactgaaaccataattatg 98  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||     
T  32556555 attgtgtaatgattttttaatgaaattattattgttacatggttttaaataatgattaagatagttatacactgaaattattattgaaaccataattatt 32556456  T
Q  99 gtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcata 198  Q
    ||||| ||||||||||| |||||| ||| |||| ||||||||||||||||  |||| | || ||||||||||||||||||||| || |||||||||||||    
T  32556455 gtttagtggttttgataatcttctatgaaaaactaaaataattgtctaatcgttttctgaattgtttatgcagggtgcataagaaaatgacttatgcata 32556356  T
Q  199 ataactt 205  Q
    |||||||    
T  32556355 ataactt 32556349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 18762701 - 18762858
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    ||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  18762701 attgtctaatggttttaaatgaaattattattggtacatgattttaaataatgattaacatgttatacactgaaattattactgaaaccataagtatggt 18762800  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||| |||||||  || ||||||||||||||||||||||| ||||||||    
T  18762801 ttaatggttttgacagtcttcaatgtgaaaccaaaataattgtctaatggttttgtaa 18762858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 18762604 - 18762716
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  18762604 ttttaaataatgattaagatgttatacactgaaattattaatgaaacaataagtatggtttaatgattttgatagtcttcattgagaaaccaaaataatt 18762703  T
Q  142 gtctaatgatttt 154  Q
    |||||||| ||||    
T  18762704 gtctaatggtttt 18762716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 18762495 - 18762607
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || | || |||| ||| |||| |    
T  18762495 ttttaaataatgattaagaggttatacactgaaattattactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaacaagataaat 18762594  T
Q  142 gtctaatgatttt 154  Q
    || ||||| ||||    
T  18762595 gtgtaatggtttt 18762607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 27079919 - 27079996
Alignment:
Q  133 aaaataattgtctaatgattttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccc 210  Q
    ||||||||||||||||  |||||| ||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  27079919 aaaataattgtctaatagttttgtgaagtgtttatgcacggtgcataagaaaatgacttatgcataataacttctccc 27079996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 32556611 - 32556540
Alignment:
Q  83 tgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||| ||||||||||||||||||||||||||   || |||||||| |||||||| ||||||||||    
T  32556611 tgaaaccataaatatggtttaatggttttgatagtcttgcatgtgaaaccaagataattgtgtaatgatttt 32556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 28123142 - 28123070
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatg 149  Q
    |||||| |||||||||  ||||||||||||||||||||||| |||| || ||||||||| |||||||| ||||    
T  28123142 tattacagaaaccatatgtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtcaaatg 28123070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 7851603 - 7851530
Alignment:
Q  81 actgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||||| | |||||||||| ||||||||||||| | ||  ||||||| |||||||| ||||||||||    
T  7851603 actgaaaccataagtgtggtttaatgattttgatagtcttgtatgtaaaaccaagataattgtgtaatgatttt 7851530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 28123004 - 28122930
Alignment:
Q  84 gaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    |||||||||  |||||||||||||||||||  || |||| |  ||||||||| ||||||||||||| ||||||||    
T  28123004 gaaaccatatgtatggtttaatggttttgacggtgttctatatgaaaccaaactaattgtctaatggttttgtaa 28122930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 16968037 - 16968082
Alignment:
Q  158 aagtgtttatgcagggtgcataaggaactgacttatgcataataac 203  Q
    |||||||||||||||||||||||| || || |||||||||||||||    
T  16968037 aagtgtttatgcagggtgcataagaaaatggcttatgcataataac 16968082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 22038107 - 22038144
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22038107 tactgaaaccataagtatggtttaatggttttgatagt 22038144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 30908709 - 30908652
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataacttctccc 210  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||  ||||||| ||||    
T  30908709 ttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttccc 30908652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 18611245 - 18611193
Alignment:
Q  153 ttgtaaagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||| |||||||||||||| |||||||| ||| || |||||||||||||||||    
T  18611245 ttgtgaagtgtttatgcagagtgcataaagaaatgtcttatgcataataactt 18611193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 4338634 - 4338681
Alignment:
Q  158 aagtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    |||||||||||||||||||||||| || || ||||||||||| |||||    
T  4338634 aagtgtttatgcagggtgcataagaaaatggcttatgcataacaactt 4338681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 28123578 - 28123519
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataa 139  Q
    |||||||||||||| |||||| |||||||||||||||| |||| ||  ||||||| ||||    
T  28123578 tactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataa 28123519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 15034078 - 15034036
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| |||||| |||||||||||||||| ||||    
T  15034078 tactgaaaccataagtatggtataatggttttgatagtgttct 15034036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 28123379 - 28123342
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  28123379 tactgaaaccataagtatggtataatggttttgatagt 28123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 31216712 - 31216667
Alignment:
Q  160 gtgtttatgcagggtgcataaggaactgacttatgcataataactt 205  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||    
T  31216712 gtgtttatgcacggtgcataaggaaatgacttatgcaccataactt 31216667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 18762422 - 18762498
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||| |||| |||||||||||||||||  |||| ||   || |||||||| |||||||| ||||| ||||    
T  18762422 attactgaaacaataagtatggtttaatggtttttttagtattgcatgtgaaaccaagataattgtgtaatggtttt 18762498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 22038313 - 22038345
Alignment:
Q  85 aaaccataattatggtttaatggttttgatagt 117  Q
    ||||||||| |||||||||||||||||||||||    
T  22038313 aaaccataagtatggtttaatggttttgatagt 22038345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 83; Significance: 2e-39; HSPs: 6)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 555 - 409
Alignment:
Q  12 gtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggtttt 111  Q
    ||||| ||| ||||||||||||  ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  555 gttttaaataaaattattattgggacatggttttaaataatgattaacatgttatacactgaaattattactgaaaccataagtatggtttcatggtttt 456  T
Q  112 gatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||    || ||||||||| ||||||||||||| ||||||||    
T  455 gatagtctctaatgtgaaaccaaagtaattgtctaatggttttgtaa 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 696 - 559
Alignment:
Q  1 attgtgtaatagtttttaatgaaattattattgttacatgattttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggt 100  Q
    |||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||        ||||||||||||||||||||||| ||||||    
T  696 attgtgtaatggttttaaatgaaattattattggtacatggttttaaataatgattaagatg-------ctgaaattattactgaaaccataagtatggt 604  T
Q  101 ttaatggttttgatagtcttctgtgagaaaccaaaataattgtcta 146  Q
    ||||| | ||||| |||||||  || ||||||||||||||| ||||    
T  603 ttaatag-tttgaaagtcttcaatgtgaaaccaaaataattatcta 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 102 - 21
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||    
T  102 tattactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaaataattgtctaatggttttgtaa 21  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 793 - 681
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||||| |||| |||||||| | ||  ||||||| ||||||    
T  793 ttttaaataatgattaagatgttatacactgaaattattactgaaatcataagtatcgtttaatgttttttatagtcttgtatgtcaaaccaagataatt 694  T
Q  142 gtctaatgatttt 154  Q
    || ||||| ||||    
T  693 gtgtaatggtttt 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 865 - 790
Alignment:
Q  78 attactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | || |||||||| |||||||| ||||| ||||    
T  865 attactgaaaccataagtatggtt-aatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttt 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 220 - 162
Alignment:
Q  90 ataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaat 148  Q
    |||||| |||||||||||||||||||| ||| | || ||||  ||||||||||||||||    
T  220 ataattgtggtttaatggttttgatagacttgtatgtgaaagaaaaataattgtctaat 162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 168627 - 168514
Alignment:
Q  45 taaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtc 144  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||  ||||||||||||||||||||||| |||  || ||||||||||||||||||    
T  168627 taaataatgattaagatgttatgcactgaaattattactgaaaccatacgtatggtttaatggttttgatagttttcaatgtgaaaccaaaataattgtc 168528  T
Q  145 taatgattttgtaa 158  Q
    ||||| ||||||||    
T  168527 taatggttttgtaa 168514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 168401 - 168320
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||| || ||||||||| ||||| ||||||| ||||||||    
T  168401 tattactgaaaccataagtatgatttaatggttttgatagtgttctatgtgaaaccaaactaattttctaatggttttgtaa 168320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 168727 - 168665
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattg 142  Q
    |||||||||||||| ||||||||||||||||||||||| || | ||  ||||||| |||||||    
T  168727 tactgaaaccataagtatggtttaatggttttgatagtgttgtatgtaaaaccaagataattg 168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 77; Significance: 7e-36; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 39209 - 39325
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||  ||||||||||||||||||||| | |||  || |||||||||||||||    
T  39209 ttttaaataatgattaagatgttatgcactgaaattattactgaaaccatacgtatggtttaatggttttgataattttcaatgtgaaaccaaaataatt 39308  T
Q  142 gtctaatgattttgtaa 158  Q
    |||||||| ||||||||    
T  39309 gtctaatggttttgtaa 39325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 39473 - 39554
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||| || ||||||||| ||||||||||||| ||||||||    
T  39473 tattactgaaaccataagtatggtttaatagttttgatagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 39554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 39850 - 39931
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||| |  |||||||||||||||||||  | |||| || ||||||||| ||||||||||||| ||||||||    
T  39850 tattactgaaaccatcaacatggtttaatggttttgattatgttctatgtgaaaccaaactaattgtctaatggttttgtaa 39931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 39112 - 39181
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatg 149  Q
    |||||||||||||| |||||||||||| |||||||||| || | ||  ||||||| |||||||| |||||    
T  39112 tactgaaaccataagtatggtttaatgattttgatagtgttgtatgtaaaaccaagataattgtgtaatg 39181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 38883 - 38957
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    |||||||||| | | || |||||||||||||||||||| |||| || ||||| |||| ||||| |||||| ||||    
T  38883 tactgaaaccgtgagtaaggtttaatggttttgatagtgttctatgtgaaacaaaaagaattgcctaatggtttt 38957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 73; Significance: 2e-33; HSPs: 7)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 16194 - 16310
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| |||| ||||| ||||||||||||| |||||||  || |||||||||||||||    
T  16194 ttttaaataatgattaagatgttatacactgaaattattactaaaactataagtatggcttaatggttttgacagtcttcaatgtgaaaccaaaataatt 16293  T
Q  142 gtctaatgattttgtaa 158  Q
    || ||||| ||||||||    
T  16294 gtgtaatggttttgtaa 16310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 22770 - 22874
Alignment:
Q  49 taatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaat 148  Q
    ||||||||  |||||||| || ||||||||||||||||||||||| |||||||||||| |||||||||| || | || ||||||||||||||||| ||||    
T  22770 taatgattttgatgttatccactgaaattattactgaaaccataagtatggtttaatgattttgatagtattgtatgtgaaaccaaaataattgtgtaat 22869  T
Q  149 gattt 153  Q
    |||||    
T  22870 gattt 22874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 16106 - 16182
Alignment:
Q  63 ttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataa 139  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || | || |||||||||||||    
T  16106 ttatacactgaaattattactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccaaaataa 16182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 22584 - 22680
Alignment:
Q  59 gatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttg 155  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| || | || |||||||| |||| ||| ||||| |||||    
T  22584 gatgttatacactaaaattattactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccaagataaatgtgtaatggttttg 22680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 22680 - 22780
Alignment:
Q  59 gatgttatacattgaaattattactgaaaccataa----ttatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgatttt 154  Q
    ||||||||||| |||||||||||||||||||||||    |||||||||||||||||||||||| || | || |||||||| |||| ||| ||||||||||    
T  22680 gatgttatacactgaaattattactgaaaccataagtatttatggtttaatggttttgatagtattgtatgtgaaaccaagataaatgtgtaatgatttt 22779  T
Q  155 g 155  Q
    |    
T  22780 g 22780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 22877 - 22931
Alignment:
Q  60 atgttatacattgaaattattactgaaaccataattatggtttaatggttttgat 114  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  22877 atgttatacactgaaattattactgaaaccataagtatggtttaatggttttgat 22931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 16511 - 16589
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttg 155  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||   || |||||||| || ||||| ||||| |||||    
T  16511 tattactgaaaccataagtatggtttaatggttttaatagtattaaatgtgaaaccaagattattgtgtaatggttttg 16589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 10752 - 10636
Alignment:
Q  42 ttttaaataatgattaagatgttatacattgaaattattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataatt 141  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||||||  ||| ||||||||||||||||||| |||  || |||||||||||||||    
T  10752 ttttatataatgattaagatgttatgcactgaaattattactgaaaccatacgtatagtttaatggttttgatagttttcaatgtgaaaccaaaataatt 10653  T
Q  142 gtctaatgattttgtaa 158  Q
     ||||||| ||||||||    
T  10652 ttctaatggttttgtaa 10636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 10513 - 10432
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||| || ||||||||| ||||||||||||| ||||||||    
T  10513 tattactgaaaccataagtatggtttaatggttttggtagtgttctatgtgaaaccaaactaattgtctaatggttttgtaa 10432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 10136 - 10055
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |||| || ||||||||| | ||||||||||| ||||||||    
T  10136 tattattgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaacttattgtctaatggttttgtaa 10055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 10831 - 10762
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatg 149  Q
    |||||||||||||| ||||||||||||||||||||||| || | ||  ||||||| |||||||| |||||    
T  10831 tactgaaaccataagtatggtttaatggttttgatagtgttgtatgtaaaaccaagataattgtgtaatg 10762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 6450 - 6371
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    ||||| ||||||||||| ||||||||||||||||||||||| |||| || ||||  ||||||||| ||||||| ||||||||    
T  6450 tattattgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaa--aaaataattatctaatggttttgtaa 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 1228 - 1156
Alignment:
Q  77 tattactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatg 149  Q
    |||||| |||||||||  ||||||||||||||||||||||| |||| || ||||||||| |||||||| ||||    
T  1228 tattacagaaaccatatgtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtcaaatg 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 1090 - 1016
Alignment:
Q  84 gaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataattgtctaatgattttgtaa 158  Q
    |||||||||  |||||||||||||||||||  || |||| |  ||||||||| ||||||||||||| ||||||||    
T  1090 gaaaccatatgtatggtttaatggttttgacggtgttctatatgaaaccaaactaattgtctaatggttttgtaa 1016  T

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Target: scaffold0455; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 1863 - 1804
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttctgtgagaaaccaaaataa 139  Q
    |||||||||||||| |||||| |||||||||||||||| |||| ||  ||||||| ||||    
T  1863 tactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataa 1804  T

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Target: scaffold0534 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 5973 - 5931
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  5973 tactgaaaccataagtatggtttaatggttttgatagtgttct 5931  T

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Target: scaffold0534; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 8864 - 8906
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||    
T  8864 tactgaaaccataagtatggttgaatggttttgatagtgttct 8906  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 126256 - 126298
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  126256 tactgaaaccataagtatggtttaatggttttgatagtgttct 126298  T

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Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 126426 - 126468
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagtcttct 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  126426 tactgaaaccataaatatggtttaatggttttgatagtgttct 126468  T

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Target: scaffold0023; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 128579 - 128616
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  128579 tactgaaaccataagtatggtttaatggttttgatagt 128616  T

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Target: scaffold0144 (Bit Score: 34; Significance: 0.0000000003; HSPs: 12)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 19758 - 19721
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  19758 tactgaaaccataagtatggtttaatggttttgatagt 19721  T

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Target: scaffold0144; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 28872 - 28835
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28872 tactgaaaccataagtatggtttaatggttttgatagt 28835  T

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Target: scaffold0144; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 31018 - 30981
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  31018 tactgaaaccataagtatggtttaatggttttgatagt 30981  T

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Target: scaffold0144; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 33393 - 33430
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  33393 tactgaaaccataagtatggtttaatggttttgatagt 33430  T

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Target: scaffold0144; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 33903 - 33940
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  33903 tactgaaaccataagtatggtttaatggttttgatagt 33940  T

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Target: scaffold0144; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 34073 - 34110
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34073 tactgaaaccataagtatggtttaatggttttgatagt 34110  T

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Target: scaffold0144; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 19418 - 19385
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttga 113  Q
    |||||||||||||| |||||||||||||||||||    
T  19418 tactgaaaccataagtatggtttaatggttttga 19385  T

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Target: scaffold0144; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 19588 - 19551
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  19588 tactgaaaccataagtatgatttaatggttttgatagt 19551  T

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Target: scaffold0144; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 28702 - 28665
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  28702 tactgaaaccataagtatggtttaatgattttgatagt 28665  T

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Target: scaffold0144; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 33563 - 33600
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  33563 tactgaaaccataagtatgatttaatggttttgatagt 33600  T

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Target: scaffold0144; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 34243 - 34280
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| | |||||||||||||||||||||    
T  34243 tactgaaaccataagtgtggtttaatggttttgatagt 34280  T

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Target: scaffold0144; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 34583 - 34616
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttga 113  Q
    |||||||||||||| |||||||||||||||||||    
T  34583 tactgaaaccataagtatggtttaatggttttga 34616  T

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Target: scaffold0581 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 347 - 310
Alignment:
Q  80 tactgaaaccataattatggtttaatggttttgatagt 117  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  347 tactgaaaccataagtatggtataatggttttgatagt 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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