View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104A_low_345 (Length: 230)
Name: NF10104A_low_345
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104A_low_345 |
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Alignment Details
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 26597653 - 26597859
Alignment:
| Q |
16 |
catcaccatcaccatcatcaacatcaacaacaatatgatctaagacagctagtaaatggaacaaggtcaacccatttcccatctataccgacagcggcta |
115 |
Q |
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| T |
26597653 |
catcaccatcatcaacatcaacatcaacaacaatatgatctaagacagctagtaaatggaacaaggtcaacccatttcccatctataccgacagcggcta |
26597752 |
T |
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| Q |
116 |
cggatgagtttttctccggtcaccggaatctgacagctttgttaactactactcatccacagacccatcaaaaccagtatgagatgatgatgttagggcg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
26597753 |
cggatgagtttttctccggtcaccggaatctgacagctttgttaactactactcatccacagacacatcaaaaccagtatgagatgatgatgttagggcg |
26597852 |
T |
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| Q |
216 |
tggagta |
222 |
Q |
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||||||| |
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| T |
26597853 |
tggagta |
26597859 |
T |
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