View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104A_low_421 (Length: 212)
Name: NF10104A_low_421
Description: NF10104A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104A_low_421 |
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Alignment Details
Target: chr1 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 43936054 - 43936223
Alignment:
| Q |
23 |
caagctctgaacttatatgaatacttgttaaaacataacttaagattgatagatcataatatgatcatcgtaatatgatctcgaaatatcgcaattgtat |
122 |
Q |
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| T |
43936054 |
caagctctgaacttatatgaatacttgttaaaacataacttaagattgatagatcataatatgatcatcctaatatgatctcgaaatatcgcaattgtat |
43936153 |
T |
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| Q |
123 |
catattttgtgggtatcaaacaagataatttaaatgaaatatccaatttagtacagataacacctcagtt |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43936154 |
catattttgtgggtatcaaacaagataatttaaatgaaatatccaatttagtacagataacacctcagtt |
43936223 |
T |
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