View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10104_low_10 (Length: 402)

Name: NF10104_low_10
Description: NF10104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10104_low_10
NF10104_low_10
[»] scaffold0576 (1 HSPs)
scaffold0576 (145-266)||(9498-9619)
[»] chr6 (32 HSPs)
chr6 (145-266)||(15364727-15364848)
chr6 (141-266)||(15328553-15328678)
chr6 (141-262)||(25924750-25924871)
chr6 (141-262)||(32784802-32784923)
chr6 (141-262)||(34413155-34413276)
chr6 (141-257)||(28965731-28965847)
chr6 (141-260)||(237286-237405)
chr6 (170-261)||(2881426-2881517)
chr6 (150-251)||(6435109-6435210)
chr6 (141-257)||(3660244-3660360)
chr6 (162-259)||(3339388-3339485)
chr6 (170-258)||(2862165-2862253)
chr6 (170-265)||(1803962-1804057)
chr6 (170-252)||(27334957-27335039)
chr6 (170-252)||(27395697-27395779)
chr6 (144-216)||(26668563-26668635)
chr6 (141-264)||(2056847-2056970)
chr6 (150-252)||(12441600-12441702)
chr6 (141-259)||(17902581-17902699)
chr6 (156-261)||(11017461-11017566)
chr6 (141-259)||(31368501-31368615)
chr6 (162-242)||(17835697-17835777)
chr6 (167-263)||(21210346-21210442)
chr6 (156-199)||(2886694-2886737)
chr6 (156-266)||(9954627-9954737)
chr6 (167-245)||(11635707-11635783)
chr6 (167-257)||(29376607-29376697)
chr6 (167-252)||(1688269-1688354)
chr6 (211-252)||(2689086-2689127)
chr6 (167-239)||(4923036-4923108)
chr6 (156-204)||(16533204-16533252)
chr6 (162-226)||(24437529-24437592)
[»] chr3 (56 HSPs)
chr3 (141-260)||(40478175-40478294)
chr3 (141-260)||(41877752-41877871)
chr3 (141-263)||(45295624-45295746)
chr3 (144-252)||(25542867-25542975)
chr3 (141-264)||(31007233-31007359)
chr3 (141-259)||(42718185-42718301)
chr3 (138-261)||(14992134-14992259)
chr3 (141-231)||(25142692-25142782)
chr3 (141-260)||(52453980-52454099)
chr3 (141-263)||(34021348-34021470)
chr3 (150-260)||(35756053-35756163)
chr3 (141-266)||(11327172-11327297)
chr3 (141-261)||(13159725-13159845)
chr3 (167-262)||(43900862-43900957)
chr3 (141-264)||(50879659-50879782)
chr3 (150-264)||(50279971-50280085)
chr3 (141-262)||(28263609-28263730)
chr3 (150-263)||(30400041-30400154)
chr3 (167-252)||(54233397-54233482)
chr3 (141-261)||(8254091-8254211)
chr3 (150-262)||(36819029-36819141)
chr3 (141-264)||(23163029-23163152)
chr3 (167-253)||(2009744-2009829)
chr3 (167-252)||(23906883-23906968)
chr3 (138-259)||(44855312-44855433)
chr3 (167-252)||(51717531-51717616)
chr3 (141-257)||(20714307-20714423)
chr3 (141-261)||(46344478-46344598)
chr3 (156-264)||(53102786-53102894)
chr3 (141-260)||(3957906-3958025)
chr3 (167-252)||(43441760-43441845)
chr3 (147-252)||(50652458-50652563)
chr3 (141-261)||(3069462-3069582)
chr3 (208-259)||(7039123-7039174)
chr3 (167-226)||(32687882-32687941)
chr3 (170-257)||(32931809-32931896)
chr3 (150-209)||(37303013-37303072)
chr3 (150-252)||(47056421-47056524)
chr3 (167-230)||(47484369-47484432)
chr3 (167-221)||(3483209-3483263)
chr3 (162-216)||(7949873-7949927)
chr3 (167-252)||(9027963-9028047)
chr3 (156-209)||(26279963-26280016)
chr3 (156-257)||(27162358-27162459)
chr3 (156-209)||(32457694-32457747)
chr3 (165-262)||(38957402-38957499)
chr3 (156-252)||(1208025-1208120)
chr3 (167-199)||(1765483-1765515)
chr3 (156-264)||(11173529-11173636)
chr3 (211-251)||(20080082-20080122)
chr3 (357-397)||(21960568-21960608)
chr3 (181-261)||(23183606-23183686)
chr3 (156-231)||(33007439-33007515)
chr3 (218-262)||(42864202-42864246)
chr3 (156-252)||(49130933-49131028)
chr3 (184-220)||(52678521-52678557)
[»] chr4 (82 HSPs)
chr4 (261-338)||(11645873-11645950)
chr4 (141-260)||(4550398-4550517)
chr4 (141-262)||(51224724-51224845)
chr4 (141-262)||(56025320-56025441)
chr4 (19-74)||(11592281-11592336)
chr4 (19-74)||(11645783-11645838)
chr4 (150-261)||(8026651-8026762)
chr4 (150-252)||(55642501-55642603)
chr4 (150-263)||(5208212-5208325)
chr4 (141-260)||(1796430-1796547)
chr4 (148-260)||(24019859-24019973)
chr4 (141-260)||(27001297-27001416)
chr4 (134-260)||(47105968-47106094)
chr4 (167-260)||(9032870-9032963)
chr4 (141-262)||(37022325-37022446)
chr4 (141-263)||(43434404-43434514)
chr4 (141-262)||(44368088-44368209)
chr4 (141-262)||(51377179-51377300)
chr4 (150-260)||(24235393-24235503)
chr4 (150-260)||(31221486-31221596)
chr4 (150-244)||(46844145-46844239)
chr4 (167-252)||(32901419-32901504)
chr4 (167-244)||(36728526-36728603)
chr4 (150-262)||(7037370-7037482)
chr4 (156-252)||(41495092-41495188)
chr4 (141-261)||(45548671-45548791)
chr4 (171-263)||(53384227-53384318)
chr4 (156-263)||(3223068-3223175)
chr4 (141-216)||(54165091-54165168)
chr4 (167-252)||(15638220-15638305)
chr4 (144-216)||(5466427-5466499)
chr4 (168-252)||(20632544-20632628)
chr4 (141-262)||(31048952-31049061)
chr4 (156-260)||(49424708-49424812)
chr4 (141-261)||(55267888-55268008)
chr4 (162-213)||(29406972-29407023)
chr4 (141-212)||(40721900-40721971)
chr4 (141-264)||(42177934-42178057)
chr4 (141-265)||(45779186-45779298)
chr4 (167-252)||(610896-610982)
chr4 (169-263)||(4971898-4971992)
chr4 (144-214)||(45923446-45923515)
chr4 (141-259)||(52669498-52669616)
chr4 (170-260)||(53662330-53662420)
chr4 (167-252)||(2193705-2193790)
chr4 (156-261)||(19910889-19910994)
chr4 (167-252)||(32365563-32365648)
chr4 (167-264)||(36512932-36513028)
chr4 (169-221)||(35580202-35580254)
chr4 (172-216)||(45176665-45176709)
chr4 (141-216)||(20956514-20956589)
chr4 (167-230)||(43358703-43358766)
chr4 (141-208)||(44170559-44170626)
chr4 (156-230)||(9162145-9162219)
chr4 (167-261)||(33483993-33484087)
chr4 (167-261)||(47519607-47519701)
chr4 (227-261)||(54165058-54165092)
chr4 (223-256)||(439294-439327)
chr4 (167-216)||(1562468-1562517)
chr4 (215-260)||(12694316-12694361)
chr4 (172-261)||(13182426-13182515)
chr4 (167-252)||(13267375-13267459)
chr4 (167-252)||(18568711-18568796)
chr4 (167-252)||(20056472-20056557)
chr4 (169-261)||(24154704-24154794)
chr4 (167-216)||(36812335-36812384)
chr4 (156-209)||(39844197-39844250)
chr4 (167-216)||(39880962-39881011)
chr4 (228-261)||(45923517-45923550)
chr4 (167-216)||(48743800-48743849)
chr4 (156-252)||(8681020-8681116)
chr4 (156-216)||(12241137-12241196)
chr4 (156-220)||(19245967-19246031)
chr4 (141-225)||(29949596-29949680)
chr4 (172-260)||(30866445-30866533)
chr4 (162-230)||(31413704-31413772)
chr4 (156-216)||(33820269-33820328)
chr4 (162-226)||(36792417-36792481)
chr4 (162-230)||(38952774-38952842)
chr4 (156-216)||(40756000-40756060)
chr4 (168-216)||(41119458-41119506)
chr4 (155-199)||(46173615-46173659)
[»] chr5 (43 HSPs)
chr5 (140-260)||(7077227-7077347)
chr5 (141-264)||(30574261-30574384)
chr5 (141-263)||(36548265-36548387)
chr5 (141-262)||(19271923-19272044)
chr5 (141-260)||(26685755-26685874)
chr5 (141-260)||(26955486-26955605)
chr5 (141-265)||(12512857-12512981)
chr5 (141-257)||(32634772-32634888)
chr5 (141-260)||(3263396-3263515)
chr5 (141-260)||(15622108-15622227)
chr5 (141-264)||(38010936-38011059)
chr5 (150-263)||(11464008-11464121)
chr5 (141-262)||(12417690-12417811)
chr5 (141-216)||(31006123-31006196)
chr5 (167-262)||(30776709-30776804)
chr5 (141-263)||(35972638-35972756)
chr5 (167-261)||(4292873-4292967)
chr5 (150-263)||(3154528-3154641)
chr5 (167-252)||(8959250-8959335)
chr5 (141-266)||(9594542-9594667)
chr5 (141-237)||(28501681-28501777)
chr5 (141-257)||(33823585-33823701)
chr5 (141-260)||(9596702-9596821)
chr5 (141-216)||(41192651-41192726)
chr5 (141-263)||(22920377-22920499)
chr5 (167-252)||(17489438-17489523)
chr5 (141-260)||(4954530-4954649)
chr5 (150-260)||(10522848-10522958)
chr5 (156-228)||(34381091-34381163)
chr5 (167-250)||(12401282-12401365)
chr5 (141-260)||(25345402-25345521)
chr5 (156-226)||(10232578-10232648)
chr5 (156-226)||(12661869-12661939)
chr5 (227-265)||(34888846-34888884)
chr5 (167-252)||(372616-372701)
chr5 (167-252)||(14914460-14914544)
chr5 (167-252)||(20719912-20719996)
chr5 (147-220)||(25038150-25038223)
chr5 (227-260)||(31006195-31006228)
chr5 (167-216)||(32873081-32873130)
chr5 (141-213)||(16553568-16553640)
chr5 (156-216)||(36415994-36416054)
chr5 (156-252)||(39595353-39595448)
[»] chr7 (45 HSPs)
chr7 (141-268)||(33881585-33881712)
chr7 (115-260)||(5900926-5901069)
chr7 (172-260)||(17157228-17157316)
chr7 (170-261)||(29609764-29609856)
chr7 (141-260)||(26041374-26041493)
chr7 (141-260)||(27164725-27164844)
chr7 (141-260)||(30864305-30864424)
chr7 (167-252)||(10014851-10014936)
chr7 (167-252)||(25614717-25614802)
chr7 (167-252)||(42060747-42060832)
chr7 (141-262)||(44511203-44511324)
chr7 (156-260)||(39369381-39369485)
chr7 (141-260)||(33050247-33050366)
chr7 (141-252)||(42431787-42431898)
chr7 (150-264)||(38978565-38978678)
chr7 (141-260)||(116695-116814)
chr7 (171-260)||(30402081-30402168)
chr7 (159-252)||(42476464-42476557)
chr7 (156-204)||(2469771-2469819)
chr7 (141-261)||(20406605-20406725)
chr7 (141-261)||(29162166-29162286)
chr7 (170-260)||(23330002-23330090)
chr7 (170-259)||(3344955-3345044)
chr7 (167-252)||(8742473-8742558)
chr7 (191-260)||(16645554-16645623)
chr7 (191-260)||(17619915-17619984)
chr7 (150-262)||(19880117-19880229)
chr7 (167-252)||(37385129-37385214)
chr7 (167-220)||(42640933-42640986)
chr7 (167-252)||(47530187-47530272)
chr7 (167-263)||(25332385-25332480)
chr7 (150-260)||(2346947-2347057)
chr7 (156-226)||(19426659-19426728)
chr7 (156-230)||(22331129-22331203)
chr7 (150-264)||(43255451-43255565)
chr7 (156-226)||(47424908-47424977)
chr7 (167-216)||(21037168-21037217)
chr7 (167-216)||(21153142-21153191)
chr7 (156-209)||(30862715-30862768)
chr7 (156-209)||(30982293-30982346)
chr7 (156-209)||(36990120-36990173)
chr7 (167-252)||(44894371-44894455)
chr7 (156-204)||(34348971-34349019)
chr7 (167-239)||(37325728-37325800)
chr7 (150-262)||(37392116-37392228)
[»] scaffold0115 (1 HSPs)
scaffold0115 (141-259)||(35382-35500)
[»] chr2 (55 HSPs)
chr2 (144-260)||(30413620-30413736)
chr2 (141-264)||(43936345-43936466)
chr2 (141-261)||(33003887-33004007)
chr2 (141-259)||(12175217-12175335)
chr2 (141-261)||(10550346-10550466)
chr2 (141-261)||(38021420-38021539)
chr2 (141-260)||(44484544-44484663)
chr2 (165-262)||(36582344-36582441)
chr2 (141-257)||(37966420-37966536)
chr2 (141-220)||(27540079-27540158)
chr2 (141-262)||(3195973-3196094)
chr2 (148-261)||(33029989-33030102)
chr2 (167-252)||(5962728-5962813)
chr2 (144-257)||(22353066-22353179)
chr2 (156-244)||(30973895-30973983)
chr2 (162-260)||(23047971-23048069)
chr2 (150-264)||(29871239-29871353)
chr2 (141-262)||(6884974-6885095)
chr2 (156-252)||(12192026-12192122)
chr2 (167-254)||(9694955-9695042)
chr2 (141-248)||(36383526-36383633)
chr2 (141-263)||(30192236-30192358)
chr2 (167-252)||(36909740-36909824)
chr2 (201-261)||(4097068-4097128)
chr2 (141-261)||(38246638-38246758)
chr2 (141-260)||(29893674-29893793)
chr2 (156-226)||(34138959-34139030)
chr2 (156-262)||(23391141-23391247)
chr2 (167-252)||(26809579-26809665)
chr2 (167-252)||(12358403-12358488)
chr2 (167-216)||(13466007-13466056)
chr2 (156-225)||(14954522-14954591)
chr2 (167-260)||(33857307-33857400)
chr2 (170-262)||(27307131-27307223)
chr2 (141-213)||(39133786-39133858)
chr2 (141-216)||(1298258-1298333)
chr2 (141-260)||(3298993-3299112)
chr2 (141-216)||(6851591-6851666)
chr2 (156-263)||(28165208-28165315)
chr2 (355-398)||(37480090-37480133)
chr2 (150-204)||(6639416-6639470)
chr2 (222-260)||(6851559-6851597)
chr2 (156-222)||(19913863-19913929)
chr2 (156-226)||(26321620-26321689)
chr2 (161-219)||(34101073-34101131)
chr2 (150-216)||(39744526-39744592)
chr2 (213-262)||(4061983-4062032)
chr2 (162-231)||(13104564-13104633)
chr2 (156-209)||(23880174-23880227)
chr2 (162-231)||(32750083-32750152)
chr2 (167-228)||(41353417-41353478)
chr2 (156-204)||(16051332-16051380)
chr2 (230-262)||(27540156-27540188)
chr2 (156-216)||(31635742-31635802)
chr2 (156-252)||(38572018-38572114)
[»] chr8 (63 HSPs)
chr8 (165-263)||(11089664-11089763)
chr8 (141-264)||(43587705-43587828)
chr8 (141-260)||(34972131-34972248)
chr8 (141-260)||(38504234-38504353)
chr8 (141-260)||(43602311-43602430)
chr8 (145-257)||(23952562-23952673)
chr8 (141-264)||(1065481-1065604)
chr8 (141-260)||(30927819-30927938)
chr8 (141-264)||(41273579-41273702)
chr8 (167-260)||(6105323-6105416)
chr8 (156-264)||(6825161-6825269)
chr8 (141-257)||(41293613-41293728)
chr8 (150-260)||(39258943-39259053)
chr8 (167-252)||(11138986-11139071)
chr8 (141-261)||(19723093-19723213)
chr8 (168-252)||(30129500-30129584)
chr8 (141-216)||(29509330-29509405)
chr8 (162-252)||(2597056-2597146)
chr8 (167-257)||(33817247-33817337)
chr8 (167-252)||(5925145-5925230)
chr8 (170-263)||(14228786-14228879)
chr8 (139-260)||(14531683-14531804)
chr8 (156-252)||(37562037-37562133)
chr8 (141-260)||(40211635-40211754)
chr8 (150-208)||(6849408-6849466)
chr8 (156-226)||(11879412-11879482)
chr8 (156-226)||(11896828-11896898)
chr8 (150-252)||(36064103-36064205)
chr8 (150-252)||(36497734-36497836)
chr8 (167-252)||(43186386-43186469)
chr8 (167-252)||(5924900-5924985)
chr8 (211-264)||(12783762-12783815)
chr8 (167-252)||(34765746-34765831)
chr8 (156-261)||(36593673-36593778)
chr8 (156-221)||(37033029-37033093)
chr8 (167-220)||(39153612-39153665)
chr8 (141-233)||(13884380-13884472)
chr8 (150-226)||(30925577-30925652)
chr8 (156-216)||(40719576-40719636)
chr8 (150-264)||(6745926-6746041)
chr8 (170-228)||(41519951-41520010)
chr8 (157-220)||(44086440-44086503)
chr8 (150-260)||(6656227-6656337)
chr8 (150-260)||(6736629-6736739)
chr8 (162-252)||(7129618-7129707)
chr8 (151-252)||(8888326-8888428)
chr8 (150-260)||(20288606-20288716)
chr8 (150-260)||(21075235-21075345)
chr8 (156-230)||(22836057-22836131)
chr8 (156-264)||(34474028-34474137)
chr8 (167-257)||(35595300-35595390)
chr8 (212-261)||(9208065-9208114)
chr8 (183-264)||(13565402-13565483)
chr8 (223-264)||(27630893-27630934)
chr8 (156-209)||(28473484-28473537)
chr8 (167-216)||(30608642-30608691)
chr8 (172-261)||(34970300-34970389)
chr8 (150-199)||(39027557-39027606)
chr8 (144-204)||(11114613-11114673)
chr8 (155-231)||(22767208-22767284)
chr8 (170-262)||(37568498-37568590)
chr8 (156-204)||(40102102-40102150)
chr8 (356-396)||(40791915-40791955)
[»] chr1 (47 HSPs)
chr1 (141-262)||(10385478-10385599)
chr1 (141-260)||(43195977-43196096)
chr1 (148-263)||(49189096-49189211)
chr1 (141-261)||(5383823-5383943)
chr1 (141-261)||(37669462-37669582)
chr1 (141-225)||(2257617-2257701)
chr1 (141-263)||(6829670-6829792)
chr1 (141-251)||(36669267-36669377)
chr1 (141-262)||(13813622-13813743)
chr1 (167-264)||(19920852-19920949)
chr1 (141-261)||(27578246-27578366)
chr1 (141-260)||(26501359-26501478)
chr1 (144-235)||(39669873-39669964)
chr1 (141-260)||(50035426-50035545)
chr1 (141-263)||(3291310-3291432)
chr1 (167-252)||(42843240-42843325)
chr1 (141-261)||(7371835-7371955)
chr1 (156-252)||(50777319-50777415)
chr1 (141-252)||(9011709-9011820)
chr1 (150-252)||(50797853-50797955)
chr1 (167-220)||(10302271-10302324)
chr1 (141-262)||(25130767-25130888)
chr1 (141-262)||(25995524-25995647)
chr1 (156-260)||(27895649-27895752)
chr1 (141-264)||(29489243-29489366)
chr1 (150-216)||(29362624-29362690)
chr1 (167-220)||(8670162-8670215)
chr1 (167-252)||(51193029-51193114)
chr1 (221-261)||(24749629-24749669)
chr1 (222-262)||(27563617-27563657)
chr1 (156-216)||(42615936-42615996)
chr1 (144-252)||(43457716-43457823)
chr1 (153-252)||(7078396-7078495)
chr1 (156-226)||(15061924-15061994)
chr1 (141-199)||(26585122-26585180)
chr1 (183-252)||(46902708-46902778)
chr1 (168-221)||(366748-366801)
chr1 (158-219)||(4618725-4618786)
chr1 (156-264)||(22389411-22389517)
chr1 (144-213)||(27563551-27563620)
chr1 (227-264)||(51704683-51704720)
chr1 (141-198)||(51704737-51704794)
chr1 (184-220)||(3606024-3606060)
chr1 (150-218)||(8905801-8905869)
chr1 (155-231)||(25302562-25302638)
chr1 (156-260)||(35043608-35043712)
chr1 (156-252)||(40610308-40610403)
[»] scaffold0172 (1 HSPs)
scaffold0172 (141-260)||(17039-17158)
[»] scaffold0514 (1 HSPs)
scaffold0514 (156-261)||(1383-1488)
[»] scaffold0085 (1 HSPs)
scaffold0085 (141-260)||(31188-31307)
[»] scaffold0002 (1 HSPs)
scaffold0002 (141-261)||(147143-147263)
[»] scaffold0522 (1 HSPs)
scaffold0522 (156-260)||(2392-2496)
[»] scaffold0004 (1 HSPs)
scaffold0004 (167-262)||(249028-249123)
[»] scaffold0121 (1 HSPs)
scaffold0121 (147-263)||(29852-29969)
[»] scaffold0119 (1 HSPs)
scaffold0119 (144-216)||(2158-2230)
[»] scaffold0027 (1 HSPs)
scaffold0027 (144-252)||(5146-5254)
[»] scaffold0011 (1 HSPs)
scaffold0011 (156-260)||(18674-18777)
[»] scaffold0193 (1 HSPs)
scaffold0193 (167-261)||(24763-24857)
[»] scaffold0054 (1 HSPs)
scaffold0054 (156-230)||(31518-31592)
[»] scaffold0003 (1 HSPs)
scaffold0003 (162-263)||(88893-88994)
[»] scaffold0618 (1 HSPs)
scaffold0618 (141-261)||(3424-3545)
[»] scaffold0049 (1 HSPs)
scaffold0049 (167-252)||(72067-72152)


Alignment Details
Target: scaffold0576 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 145 - 266
Target Start/End: Original strand, 9498 - 9619
Alignment:
Q  145 tgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 244  Q
    |||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  9498 tgttattatcctctctcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgt 9597  T
Q  245 acaaatattattgctcttttca 266  Q
    |||||||| ||||||| |||||    
T  9598 acaaatatcattgctcatttca 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 145 - 266
Target Start/End: Original strand, 15364727 - 15364848
Alignment:
Q  145 tgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 244  Q
    |||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  15364727 tgttattatcctctctcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgt 15364826  T
Q  245 acaaatattattgctcttttca 266  Q
    |||||||| ||||||| |||||    
T  15364827 acaaatatcattgctcatttca 15364848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 266
Target Start/End: Original strand, 15328553 - 15328678
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||| | |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  15328553 atgatgttattatcctctttcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatgg 15328652  T
Q  241 atgtacaaatattattgctcttttca 266  Q
    |||||||||||| ||||||| |||||    
T  15328653 atgtacaaatatcattgctcatttca 15328678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 25924871 - 25924750
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||   |||| |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||     
T  25924871 atgatgttattattcgctctcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatga 25924772  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  25924771 atgtacaaatatcattgctctt 25924750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 32784802 - 32784923
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| |||||| |||||||||||||| || |||||||| |||| |||||||| || |||||||||||||||||||||      
T  32784802 atgatgttattatcctctctcttcctttttctttctccattatttttgactaatcaaaagagagaaaaacaaaattgtcaccaaaattgtcattaaataa 32784901  T
Q  241 atgtacaaatattattgctctt 262  Q
    ||||| |||||| |||||||||    
T  32784902 atgtagaaatatcattgctctt 32784923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 34413155 - 34413276
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||  ||||| |||| ||||||||| ||||| ||||| ||||||||||| |||  ||| ||||||| ||||||||||||||||||||| |    
T  34413155 atgatgttgttattctctctcttcctttttctctccccattgtttttgaccaatcaaaagagaaaaaatcaaagttgtcaccaaaattgtcattaaattg 34413254  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  34413255 atgtacaaatatcattgctctt 34413276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 28965847 - 28965731
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||| ||||||| |||||| |||  |||||||||| |||| ||||| ||||||||||| ||||  ||||||||||||||||||| ||||||||||||||    
T  28965847 atgatattattatattctctcttcttttttctctcttcattgtttttgaccaatcaaaagagagagaaacaaagttatcaccaaagttgtcattaaatgg 28965748  T
Q  241 atgtacaaatattattg 257  Q
    ||||||| |||| ||||    
T  28965747 atgtacatatatcattg 28965731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 237405 - 237286
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| |||||  ||| ||||||||||||||||||||| |||||| | || |||| ||||||||| | |||| ||| |||||||||||| |    
T  237405 atgatgttcttatcgtctctcatcctttttctctctccattatttttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgtcattaaatag 237306  T
Q  241 atgtacaaatattattgctc 260  Q
    |||| ||||||| |||||||    
T  237305 atgtccaaatatcattgctc 237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 2881426 - 2881517
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    |||||||| ||||||||| |||||| | || ||||  |||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||    
T  2881426 tctctctctattatttttgaccaataagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtccaaatatcattgctct 2881517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 6435109 - 6435210
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||||||||| || | |||||||| |||||| ||||| |||||| | || |||| ||||||| ||| |||||||||||||||| || ||||||||||||    
T  6435109 ttatcttctctcttactttttctctatccattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaa 6435208  T
Q  250 ta 251  Q
    ||    
T  6435209 ta 6435210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 3660360 - 3660244
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||||||||| |||  |||||||||| |||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||||||  |||||    
T  3660360 atgatggtcttatcttctctcttcttttttctctctgcattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 3660261  T
Q  241 atgtacaaatattattg 257  Q
    |||||||||||| ||||    
T  3660260 atgtacaaatatcattg 3660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 3339485 - 3339388
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 259  Q
    |||| ||||||||||| ||| ||||| |||||| |||| |||| |||||||  || |||| ||| ||||||| |||||||||||||||||| ||||||    
T  3339485 ttcctttttctctctctattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgct 3339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 2862165 - 2862253
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgc 258  Q
    |||||||| ||||||||| |||||| | || ||||  ||||||| || |||||||| |||||||||||||||||| ||||||| |||||    
T  2862165 tctctctctattatttttgaccaataagaaaagagagaaacaaaattgtcaccaaagttgtcattaaatggatgtccaaatatcattgc 2862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 1803962 - 1804057
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttttc 265  Q
    |||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || ||||||||||||||| | | ||||||||    
T  1803962 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactcttttc 1804057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 27334957 - 27335039
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||| ||||||||| |||||| |||| |||| ||||||| ||| |||  ||| ||||||| ||||||||||||||||||    
T  27334957 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatat 27335039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 27395697 - 27395779
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||| ||||||||| |||||| |||| |||| ||||||| ||| |||  ||| ||||||| ||||||||||||||||||    
T  27395697 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatat 27395779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 26668563 - 26668635
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| ||||| |||| |||||||| |  ||||||||| | ||||||||| ||||||||||||||||    
T  26668563 atgttattatcctctctcttcctttttctctttttattatttttgatcaatcaaaagagaggaaaacaaagtt 26668635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 2056847 - 2056970
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||  |||||||| |||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||||||  ||||     
T  2056847 atgatggtcttatcctctctcttcttttttctctatccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaatga 2056946  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| |||||||||||    
T  2056947 atgtacaaatatcattgctctttt 2056970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 12441600 - 12441702
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||||||||| || | ||||||||||||||| ||||| ||| || | || |||| ||| ||| ||| |||||||| ||||||| || | ||||||||||    
T  12441600 ttatcttctctcttactttttctctctccattgtttttaaccgataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattagatgtacaaa 12441699  T
Q  250 tat 252  Q
    |||    
T  12441700 tat 12441702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 17902699 - 17902581
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||  |||| |||||||||| ||||| |||||| | || |||| |||||||  ||||||| ||| |||||||  ||| |    
T  17902699 atgatggtcttatcctctctcttcttttttatctctccattgtttttgaccaataagaagagagaaaaacaatattatcactaaagttgtcatggaatag 17902600  T
Q  241 atgtacaaatattattgct 259  Q
    |||||||||||| ||||||    
T  17902599 atgtacaaatatcattgct 17902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 11017461 - 11017566
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||| ||  ||||||||||||||||| |     
T  11017461 tctcttttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcac 11017560  T
Q  256 tgctct 261  Q
    ||||||    
T  11017561 tgctct 11017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 31368615 - 31368501
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatt---aaa 237  Q
    |||||||||||||| | ||| |||  |||||||| || ||| |||||||||||| ||||       |||||||||| |||||||| ||||||||   |||    
T  31368615 atgatgttattatcctatctcttcatttttctctatctattgttttttaccaataaaaa-------aaacaaagttgtcaccaaagttgtcattcataaa 31368523  T
Q  238 tggatgtacaaatattattgct 259  Q
    ||||||||||||||| ||||||    
T  31368522 tggatgtacaaatatcattgct 31368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 17835697 - 17835777
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggat 242  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||  ||| ||||| ||||||||||    
T  17835697 ttcctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtccttaaatggat 17835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 21210346 - 21210442
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 263  Q
    ||||||||||||||| ||||| | |||| | || |||| ||||||| ||| ||| | || |||||||| | |||||||| |||||| ||||||||||    
T  21210346 ttttctctctccattgtttttaatcaataagaagagagaaaaacaaggttgtcaactaagttgtcattcactggatgtataaatatcattgctcttt 21210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 2886694 - 2886737
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaa 199  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  2886694 tctctattcctttttctctctccattgttttttaccaatgaaaa 2886737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 9954627 - 9954737
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa-ttgtcattaaatggatgtacaaatatta 254  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| || |  ||||| ||||||||| |||| ||||||||| ||| ||||||| |    
T  9954627 tctctcttccgttttctctctccattgtttttaaccaatgaaaagagagaaagaagaagttgtcaccaaaagttgt-attaaatggttgttcaaatatca 9954725  T
Q  255 ttgctcttttca 266  Q
     | |||||||||    
T  9954726 ctcctcttttca 9954737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 11635707 - 11635783
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgta 245  Q
    ||||||||||||||||||||| |||||| |||| | |  |||||| |||| ||| |||||||||| | |||||||||||    
T  11635707 ttttctctctccattatttttgaccaataaaaaaaaa--aaaacagagttgtcatcaaaattgtcttcaaatggatgta 11635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 29376697 - 29376607
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 257  Q
    |||||| |||||||| ||| | |||||| | || |||| ||||||  ||| ||| ||||||||||| ||||| ||||||||||||| ||||    
T  29376697 ttttctttctccattgtttataaccaataagaagagagcaaaacatggttgtcatcaaaattgtcactaaatagatgtacaaatatcattg 29376607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 1688354 - 1688269
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||| |||||||||  ||||| |||  | ||||||||  |||||| ||| |||||||    
T  1688354 ttttctctctccattgtttttaaccaataaaaagagaggaaaaagaagttgtcaagataattgtcaaaaaatggttgttcaaatat 1688269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 2689086 - 2689127
Alignment:
Q  211 aaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  2689086 aaagttgtcacaaaaattgtcattaaatggatgttcaaatat 2689127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 4923036 - 4923108
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 239  Q
    ||||||||||| ||||||||| |||||| | || |||| |||||||| ||||||  ||| ||||||| |||||    
T  4923036 ttttctctctcaattatttttaaccaataagaagagagaaaaacaaaattatcataaaagttgtcatcaaatg 4923108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 16533252 - 16533204
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagag 204  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  16533252 tctctcttcctttttctctctccattgttttttaccaatgaaaagagag 16533204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 24437529 - 24437592
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    |||| ||||||||||||||| ||||| |||||| |||| ||||||||| |||||| ||| |||||    
T  24437529 ttcctttttctctctccattgtttttaaccaataaaaaaagaggaaaa-aaagttgtcatcaaaa 24437592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 8e-40; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 40478294 - 40478175
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  40478294 atgatgttattatcctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaaattgtcattaaatgg 40478195  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  40478194 atgtacaaatatcattgctc 40478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 41877752 - 41877871
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||||||||||| |||||||| ||||||||||||||    
T  41877752 atgatgttattatcctctctcttcctttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaatgg 41877851  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  41877852 atgtacaaatatcattgctc 41877871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 45295746 - 45295624
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||||||||||| ||||||||  |||||||||||||    
T  45295746 atgatgttattatcctctctcttcctttttctctctacattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagctgtcattaaatgg 45295647  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||||||||||    
T  45295646 atgtacaaatatcattgctcttt 45295624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 25542975 - 25542867
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 243  Q
    ||||||||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||| ||||||| |||| ||| || ||||||||||||||    
T  25542975 atgttattatcctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaccaaagttgtcactaaagttatcattaaatggatg 25542876  T
Q  244 tacaaatat 252  Q
    |||||||||    
T  25542875 tacaaatat 25542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 31007359 - 31007233
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt---atcaccaaaattgtcattaaa 237  Q
    |||||||||||||| ||||| |||| |||||||| | |||| ||||| ||||||||||| ||||||||||||||||   | ||||||| || ||||||||    
T  31007359 atgatgttattatcctctctcttcctttttctcttttcattgtttttaaccaatcaaaagagaggaaaacaaagttgtcaccaccaaagttatcattaaa 31007260  T
Q  238 tggatgtacaaatattattgctctttt 264  Q
    || |||||||||||| |||||||||||    
T  31007259 tgaatgtacaaatatgattgctctttt 31007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 42718185 - 42718301
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||||||||||| |||||| |||  |||||||||| |||| ||||| ||||||||||| ||||  |||||||||| ||||||||||||||||||||||     
T  42718185 atgatgttattatattctcttttcttttttctctcttcattgtttttgaccaatcaaaagagag--aaacaaagttgtcaccaaaattgtcattaaatga 42718282  T
Q  241 atgtacaaatattattgct 259  Q
    ||||||| |||| ||||||    
T  42718283 atgtacatatatcattgct 42718301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 14992134 - 14992259
Alignment:
Q  138 cagatgatgttattatcttctctattcccttttctctctcc--attattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta 235  Q
    ||||||||||||||||| ||||| |||| | |||||||||   ||| | ||| ||||||||||| |||  ||||||||||| |||||||| |||||||||    
T  14992134 cagatgatgttattatcctctcttttccttgttctctctctttattgtgtttgaccaatcaaaaaagaataaaacaaagttgtcaccaaagttgtcatta 14992233  T
Q  236 aatggatgtacaaatattattgctct 261  Q
    ||||||||||||||||| ||| ||||    
T  14992234 aatggatgtacaaatatcatttctct 14992259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 25142692 - 25142782
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 231  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||||||||| ||||||||| |||||    
T  25142692 atgatgttattatcctctctcttcctttttctctctccattgtttttgaccaattaaaagagaggaaaacaaagtaatcaccaaagttgtc 25142782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 52454099 - 52453980
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || ||||  |||||||||| |||| ||| ||||||| ||||||    
T  52454099 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatgg 52454000  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  52453999 atgtacaaatatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 34021470 - 34021348
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || |||| ||||||||||| |||| ||| |||||||  |||||    
T  34021470 atgatggtcttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatgg 34021371  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||||||||||    
T  34021370 atgtacaaatatcattgctcttt 34021348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 35756053 - 35756163
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||||||| ||||||| |||| ||||||||||    
T  35756053 ttatcatctctcttcatttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaa 35756152  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  35756153 tatgattgctc 35756163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 266
Target Start/End: Original strand, 11327172 - 11327297
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || ||||  |||||| ||| |||| ||| ||||||| ||||||    
T  11327172 atgatggtcttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatgg 11327271  T
Q  241 atgtacaaatattattgctcttttca 266  Q
    |||||||||||| |||||||||||||    
T  11327272 atgtacaaatatcattgctcttttca 11327297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 13159725 - 13159845
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  13159725 atgatggtcttatcgtctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 13159824  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  13159825 atgtacaaatatcattgctct 13159845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 43900862 - 43900957
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    ||||||||||||||||||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||||||||  |||||| |||||||||    
T  43900862 ttttctctctccattatttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctctt 43900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 50879659 - 50879782
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||||||||| |||| ||||||||||||||| | ||| |||||| | || |||| | ||||||||| |||| ||| |||||||  |||||    
T  50879659 atgatggtcttatcttctctcttcctttttctctctccattgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgtcatggaatgg 50879758  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| ||| |||||||    
T  50879759 atgtacaaatatcatttctctttt 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 50280085 - 50279971
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||  ||| ||||||| |||||||||||||||    
T  50280085 ttatcctctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaa 50279986  T
Q  250 tattattgctctttt 264  Q
    ||| |||||||||||    
T  50279985 tatcattgctctttt 50279971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 28263609 - 28263730
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || | || |||| |||||| |||| ||| ||||||| ||||||    
T  28263609 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgtcatgaaatgg 28263708  T
Q  241 atgtacaaatattattgctctt 262  Q
    ||| |||||||| |||||||||    
T  28263709 atgaacaaatatcattgctctt 28263730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 30400154 - 30400041
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  ||||||||||||||    
T  30400154 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaa 30400055  T
Q  250 tattattgctcttt 263  Q
    ||| ||||||||||    
T  30400054 tataattgctcttt 30400041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 54233482 - 54233397
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  54233482 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 54233397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 8254091 - 8254211
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| |||||  || || | || ||||  ||| || ||| |||| ||||||||||| ||||||    
T  8254091 atgatggtcttatcatctctcttcctttttctctctccattgtttttagccgataagaagagagagaaataatgttgtcactaaaattgtcatgaaatgg 8254190  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  8254191 atgtacaaatatcattgctct 8254211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 36819029 - 36819141
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  36819029 ttatcctctctcttcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 36819128  T
Q  250 tattattgctctt 262  Q
    ||| |||| ||||    
T  36819129 tatcattgttctt 36819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 23163152 - 23163029
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| |||||||||| |||| ||||| |||||| | || |||| |||||||| || |||| |||||||||||  ||| |    
T  23163152 atgatggtcttatcctctctcttcctttttctctcttcattctttttgaccaataagaaaagagaaaaacaaaattgtcactaaaattgtcatggaattg 23163053  T
Q  241 atgtacaaatattattgctctttt 264  Q
    ||||  |||||| |||||||||||    
T  23163052 atgtctaaatatcattgctctttt 23163029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 2009744 - 2009829
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatatt 253  Q
    ||||||||||||||||||||| |||||| | || |||| ||| ||| ||| |||||||| |||||| ||||| ||||||||||||||    
T  2009744 ttttctctctccattatttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtca-taaattgatgtacaaatatt 2009829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 23906968 - 23906883
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  23906968 ttttctctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 23906883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 44855312 - 44855433
Alignment:
Q  138 cagatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaa 237  Q
    |||| |||||| ||||| | ||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| ||  || |||| ||| ||||||| |||    
T  44855312 cagacgatgttcttatcatttctcttcctttttctctctccattttttttaaccaataagaagagagaaaaataagattgtcactaaagttgtcatgaaa 44855411  T
Q  238 tggatgtacaaatattattgct 259  Q
    | ||||||||||||| ||||||    
T  44855412 ttgatgtacaaatatcattgct 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 51717531 - 51717616
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||| ||||||||||||||||||||||  | || |||| ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  51717531 ttttttctctccattattttttaccaacaagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 51717616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 20714307 - 20714423
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || | || |||| || ||| |||| |||||| ||||  |||||    
T  20714307 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtcactaaaattatcatggaatgg 20714406  T
Q  241 atgtacaaatattattg 257  Q
    |||||||||||| ||||    
T  20714407 atgtacaaatatcattg 20714423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 46344478 - 46344598
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| |||||| |||||||||||||| |||||| | || | || |||| || ||| |||| ||| ||||| | |||||     
T  46344478 atgatggtcttatcctctctcttcctttttctttctccattatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatga 46344577  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  46344578 atgtacaaatatcattgctct 46344598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 53102894 - 53102786
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| |||| |||||||||| ||||| | |||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| ||    
T  53102894 tctctcttcctttttttctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcat 53102795  T
Q  256 tgctctttt 264  Q
    ||| |||||    
T  53102794 tgccctttt 53102786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 3958025 - 3957906
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || | || ||||||| ||| |||| ||| ||||| |  |||||    
T  3958025 atgatggtcttatcctctctcttcctttttctctctccattgtttttgacaaataagaagatagaaaaacaaggttgtcactaaagttgtcctggaatgg 3957926  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  3957925 atgtacaaatatcattgctc 3957906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 43441760 - 43441845
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||||||||| |||||| |||| |||| |||  || ||| ||  |||| ||||||| || |||||||||||||||    
T  43441760 ttttctctctccattatttttgaccaataaaaaaagagaaaagtaaggttgtcgtcaaagttgtcatcaattggatgtacaaatat 43441845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 50652458 - 50652563
Alignment:
Q  147 ttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtac 246  Q
    |||||||| ||||| |||| ||| ||||||||||| ||||| |||||| | || |||| ||| |||| || ||| |||||||||||| || |  ||||||    
T  50652458 ttattatcctctctcttccttttactctctccattgtttttgaccaataagaagagagaaaagcaaaattgtcatcaaaattgtcatcaattaaatgtac 50652557  T
Q  247 aaatat 252  Q
    ||||||    
T  50652558 aaatat 50652563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 3069582 - 3069462
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| || |||||||||||| ||||| |||||| | || |||| |||||||  ||  ||| ||| |||||||  |||||    
T  3069582 atgatggtcttatcctctctcttcctttatctctctccattgtttttgaccaataagaagagagaaaaacaagattcccactaaagttgtcatggaatgg 3069483  T
Q  241 atgtacaaatattattgctct 261  Q
    |||| ||||||| ||||||||    
T  3069482 atgtgcaaatatcattgctct 3069462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 7039174 - 7039123
Alignment:
Q  208 aacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 259  Q
    ||||| |||||||| ||||||||||| ||||||| |||||||||| ||||||    
T  7039174 aacaaggttatcactaaaattgtcatgaaatggaagtacaaatatcattgct 7039123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 32687941 - 32687882
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||  |||||||||||||||    
T  32687941 ttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaa 32687882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 32931896 - 32931809
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 257  Q
    |||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||  | |||||||||||||||||| ||||    
T  32931896 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatcattg 32931809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 37303072 - 37303013
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    |||| |||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  37303072 ttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaa 37303013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 47056524 - 47056421
Alignment:
Q  150 ttatcttctctattcccttttctctctccattatttttt-accaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 248  Q
    ||||||||||| |||| ||||||||||| |||  ||||| ||||||  ||| |||| |||  || ||| ||| |||||||||||| || |||||||||||    
T  47056524 ttatcttctctcttcctttttctctctcaattggtttttgaccaatagaaagagagaaaagtaaggttgtcatcaaaattgtcatcaactggatgtacaa 47056425  T
Q  249 atat 252  Q
    ||||    
T  47056424 atat 47056421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 47484369 - 47484432
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    ||||||||||||||| ||||| |||||| |||| |||| | |||||||||||| | ||||||||    
T  47484369 ttttctctctccattgtttttgaccaatgaaaagagagcacaacaaagttatcccaaaaattgt 47484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 3483209 - 3483263
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 221  Q
    ||||||||||||||||||||||| |||| |||| |||| |||| |||||| ||||    
T  3483209 ttttctctctccattattttttatcaatgaaaagagagaaaaaaaaagttgtcac 3483263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 7949873 - 7949927
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||| ||||||||||||||| ||||| ||||||||||| |||| |||| ||||||    
T  7949873 ttcctttttctctctccattttttttaaccaatcaaaagagagaaaaataaagtt 7949927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 9027963 - 9028047
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||||||||  |||| ||||| |||| ||||| || || |||||| ||| |||||||    
T  9027963 ttttctctctccattgtttttgaccaataaaaatagagagaaacgaagttgtcacaaaaatcgt-atcaaatggttgttcaaatat 9028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 26279963 - 26280016
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||||||||    
T  26279963 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagaggaaaa 26280016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 27162459 - 27162358
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| |||| |||||||||||||||| |||||| |||| | || |||  |||||| |||  ||| |||||| |||||| ||||| |||||| ||    
T  27162459 tctctcttcctttttttctctccattatttttaaccaataaaaagatagaaaagtaaagttgtcaataaagttgtcaataaatgaatgtagaaatatcat 27162360  T
Q  256 tg 257  Q
    ||    
T  27162359 tg 27162358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 32457747 - 32457694
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  32457747 tctctcttcctttttctctctccattatttttaaccaatgaaaagagagaaaaa 32457694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 38957499 - 38957402
Alignment:
Q  165 ccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    |||||||| |||||||||||||| |||||| |||| |||  |||| |   ||||| | ||| || ||||||||| ||| ||||||||| |||||||||    
T  38957499 ccttttctttctccattatttttgaccaataaaaagagaaaaaaatatgattatcgctaaagttatcattaaatagatatacaaatatcattgctctt 38957402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 1208025 - 1208120
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| ||||||| ||||||| |||||||  ||| | || |||| ||| ||||||| |||||||| ||| ||| || |||||||||||||||    
T  1208025 tctcttttcctttttctc-ctccattgttttttattaataagaagagagaaaatcaaagttgtcaccaaagttgacatcaattggatgtacaaatat 1208120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 1765483 - 1765515
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaa 199  Q
    |||||||||||||||||||||||||||| ||||    
T  1765483 ttttctctctccattattttttaccaatgaaaa 1765515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 11173529 - 11173636
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| |||||||||  |||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||| || |||||| ||| ||||||||||    
T  11173529 tctctcttcctttttctctcaacattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatggttgttcaaatattat 11173627  T
Q  256 tgctctttt 264  Q
    | |||||||    
T  11173628 tactctttt 11173636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 20080122 - 20080082
Alignment:
Q  211 aaagttatcaccaaaattgtcattaaatggatgtacaaata 251  Q
    |||||| |||| |||||||||||||||||||||| ||||||    
T  20080122 aaagttgtcacaaaaattgtcattaaatggatgttcaaata 20080082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 21960568 - 21960608
Alignment:
Q  357 ctggtggtattggcctgggacctgagtctgtgctcctcctc 397  Q
    |||||||||||||| |||||||||||  |||||||||||||    
T  21960568 ctggtggtattggcttgggacctgagagtgtgctcctcctc 21960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 23183686 - 23183606
Alignment:
Q  181 tattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||||| |||||| ||| ||||| ||   ||| || |||||||| || ||||||||||||||||||||||| ||| ||||    
T  23183686 tatttttgaccaataaaactagagaaatttaaaattgtcaccaaagttatcattaaatggatgtacaaatatcatttctct 23183606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 33007439 - 33007515
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaaca-aagttatcaccaaaattgtc 231  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| | ||||| |||| |||||||||    
T  33007439 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtc 33007515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 42864246 - 42864202
Alignment:
Q  218 tcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    |||||||| ||||||||| || ||||||||||||| |||||||||    
T  42864246 tcaccaaagttgtcattagatagatgtacaaatatcattgctctt 42864202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 49130933 - 49131028
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| ||||||||||||||| ||||| || ||| |||| ||||  |||  ||||| |||| ||||||||| | |||||||||| |||||||    
T  49130933 tctctcttcctttttctctctccattgtttttgactaatgaaaagagagagaaaagaagttgtcacaaaaattgtc-tcaaatggatgttcaaatat 49131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 52678557 - 52678521
Alignment:
Q  184 tttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    |||| |||||||||||||||| |||||||||||||||    
T  52678557 ttttaaccaatcaaaatagagaaaaacaaagttatca 52678521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 11645873 - 11645950
Alignment:
Q  261 ttttcaattgctgctcacatttcatattgttttagtttgactatttagcttaattgattgataaaaatttatgttgat 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645873 ttttcaattgctgctcacatttcatattgttttagtttgactatttagcttaattgattgataaaaatttatgttgat 11645950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 4550398 - 4550517
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  4550398 atgatgttattatcctctctcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatgg 4550497  T
Q  241 atgtacaaatattattgctc 260  Q
    ||||| |||||| |||||||    
T  4550498 atgtataaatatcattgctc 4550517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 51224845 - 51224724
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| || | |||||||||| |||| ||||| ||||||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  51224845 atgatgttattatcctctctctttctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatgg 51224746  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  51224745 atgtacaaatatcattgctctt 51224724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 56025320 - 56025441
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||| ||||||| |||||||| |||||||||||||     
T  56025320 atgatgttgttatcctctctgttcctttttctctctccattgtttttgaccaatcaaaagagagaaaatcaaagttgtcaccaaagttgtcattaaatga 56025419  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  56025420 atgtacaaatatcattgctctt 56025441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 11592336 - 11592281
Alignment:
Q  19 tgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11592336 tgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 11592281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 11645783 - 11645838
Alignment:
Q  19 tgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645783 tgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 11645838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 8026762 - 8026651
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| |||||||  ||||||||||||||    
T  8026762 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaa 8026663  T
Q  250 tattattgctct 261  Q
    ||| ||||||||    
T  8026662 tatcattgctct 8026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 55642603 - 55642501
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||| |||| |||  ||| ||| ||| |||||||| || ||||||| ||||||||||||    
T  55642603 ttatcctctctcttcctttttctctctccattattttttaccaataaaaagagataaaagcaaggttgtcaccaaagttatcattaattggatgtacaaa 55642504  T
Q  250 tat 252  Q
    |||    
T  55642503 tat 55642501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 5208325 - 5208212
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  5208325 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 5208226  T
Q  250 tattattgctcttt 263  Q
    ||| ||||||||||    
T  5208225 tatcattgctcttt 5208212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 1796430 - 1796547
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||||| | |||| ||| |||||||  |||||    
T  1796430 atgatgtt-ttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaag-tgtcactaaagttgtcatggaatgg 1796527  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  1796528 atgtacaaatatcattgctc 1796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 24019973 - 24019859
Alignment:
Q  148 tattatcttctctattcccttttctctctc--cattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgta 245  Q
    ||||||| ||||| |||| |||||||||||  || | ||||| ||||||||||| ||||  |||||| ||| |||||||| |||||||||||| ||||||    
T  24019973 tattatcctctctcttcctttttctctctctccaatgtttttgaccaatcaaaagagagagaaacaaggttgtcaccaaagttgtcattaaatagatgta 24019874  T
Q  246 caaatattattgctc 260  Q
    ||||||| |||||||    
T  24019873 caaatatcattgctc 24019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 27001416 - 27001297
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  27001416 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 27001317  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  27001316 atgtacaaatatcattgctc 27001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 260
Target Start/End: Original strand, 47105968 - 47106094
Alignment:
Q  134 tacacagatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcat 233  Q
    |||||| |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||    
T  47105968 tacacacatgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 47106067  T
Q  234 taaatggatgtacaaatattattgctc 260  Q
      ||||||||||||||||| |||||||    
T  47106068 ggaatggatgtacaaatatcattgctc 47106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 260
Target Start/End: Original strand, 9032870 - 9032963
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||| || |||||||||||||||||| |||||||    
T  9032870 ttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctc 9032963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 37022325 - 37022446
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| |||| |||||||||| ||||| |||||| |||| | || |||||||  ||||||| ||| ||||||| ||||||    
T  37022325 atgatggtcttatcatctctcttcctttttatctctccattgtttttgaccaataaaaaaaaagaaaaacaagattatcactaaagttgtcatgaaatgg 37022424  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| || ||||||    
T  37022425 atgtacaaatatcatcgctctt 37022446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 43434404 - 43434514
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||||||||||| |||||| |||| |||||||| |||||| ||||| ||||||||||| | ||||||||||||            ||||||||||||||    
T  43434404 atgatgttattattttctctcttcctttttctctgtccattgtttttgaccaatcaaaagataggaaaacaaag------------ttgtcattaaatgg 43434491  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||||||||||    
T  43434492 atgtacaaatatcattgctcttt 43434514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 44368209 - 44368088
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| |||| || ||| |||| ||| ||||||| ||||||    
T  44368209 atgatggtcttatcatctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatgg 44368110  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  44368109 atgtacaaatatcattgctctt 44368088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 51377300 - 51377179
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||   |||||    
T  51377300 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatgg 51377201  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  51377200 atgtacaaatatcattgctctt 51377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 24235393 - 24235503
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||  ||| || |||| ||| ||||||| |||||||||||||||    
T  24235393 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaatggatgtacaaa 24235492  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  24235493 tatcattgctc 24235503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 31221486 - 31221596
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| |||||||||||  ||| ||||||||||    
T  31221486 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaaattgtcatggaattgatgtacaaa 31221585  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  31221586 tatcattgctc 31221596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 46844239 - 46844145
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 244  Q
    |||| |||||| |||  ||||||||||||||| ||||| |||||| |||| |||| ||||||||||| |||||||| ||||| |||||| |||||    
T  46844239 ttattttctctcttcttttttctctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgt 46844145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 32901419 - 32901504
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || ||||||||||| |||| || |||||||||||||||    
T  32901419 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatat 32901504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 36728603 - 36728526
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 244  Q
    ||||||||||||||| |||||||||||| | || |||| ||||||||||| |||||||| ||||||| || |||||||    
T  36728603 ttttctctctccattgttttttaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatcaattggatgt 36728526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 7037482 - 7037370
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||| | ||  ||| ||||||| ||| || | ||| |||||||  ||| ||||||||||    
T  7037482 ttatcttctctcttcctttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcatggaatagatgtacaaa 7037383  T
Q  250 tattattgctctt 262  Q
    ||| |||||||||    
T  7037382 tataattgctctt 7037370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 41495092 - 41495188
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||||||||||| |||| || | ||| |||||||||    
T  41495092 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaaattatcatcaattagatatacaaatat 41495188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 45548791 - 45548671
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||||| |||||| ||||| |||| |||| |||||| ||| ||||  |||||| ||||||||  ||||||| ||  |||| ||| ||||||||| || |    
T  45548791 atgatgtcattatcctctctcttcctttttgtctctctattgttttcaaccaataaaaatagaaaaaaacaaggtcgtcactaaagttgtcattagatag 45548692  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  45548691 atgtacaaatatcattgctct 45548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 53384318 - 53384227
Alignment:
Q  171 ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 263  Q
    ||||||||||| ||||| |||||| | || |||| |||||||| || |||| ||| || |||| |||||||||||||||||||||||||||||    
T  53384318 ctctctccattgtttttgaccaataagaagagagaaaaacaaa-ttgtcactaaagttatcataaaatggatgtacaaatattattgctcttt 53384227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 3223068 - 3223175
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| || ||||  ||||||||||||||||| ||    
T  3223068 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagttttcatggaatggatgtacaaatatcat 3223167  T
Q  256 tgctcttt 263  Q
    ||||||||    
T  3223168 tgctcttt 3223175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 54165168 - 54165091
Alignment:
Q  141 atgatgttattatcttctctat--tcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||||||||| ||||| |  ||| |||||||||| |||| ||||| ||||||||||| ||||||||||||||||    
T  54165168 atgatgttattatcctctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaagtt 54165091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 15638220 - 15638305
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| |||||  ||||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  15638220 ttttctctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 15638305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 5466499 - 5466427
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||| ||||||||||| ||||||||||| ||||||||| ||||||  ||||||| ||||| ||||||    
T  5466499 atgtttttattttctctattcctttttctctctctattatttttaaccaatagaaatagaagaaaataaagtt 5466427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 20632628 - 20632544
Alignment:
Q  168 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||||||| ||||| ||||||   || |||  |||| |||||| |||||||||||||||| || |||||||||||||||    
T  20632628 tttctctctccattgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatat 20632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 31048952 - 31049061
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||| |||||||| ||||| || | ||||||||||||||| ||||| | ||||||||| |||| |||||||||            ||||||||||||||    
T  31048952 atgatattattatcctctctctttctttttctctctccattgtttttgatcaatcaaaagagagaaaaacaaag------------ttgtcattaaatgg 31049039  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  31049040 atgtacaaatatcattgctctt 31049061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 49424812 - 49424708
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||  |||| ||||||| ||||  |||||| ||    
T  49424812 tctctcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagctgtccttaaatgaatgtcaaaatatcat 49424713  T
Q  256 tgctc 260  Q
    |||||    
T  49424712 tgctc 49424708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 55268008 - 55267888
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| |||||||||||||||  |||| |||||| | || |||| ||||||| |||||||| ||| |||| ||  ||| |    
T  55268008 atgatgatcttatcctctctcttcctttttctctctccattgcttttgaccaataagaagagagaaaaacaaggttatcactaaagttgttatggaatag 55267909  T
Q  241 atgtacaaatattattgctct 261  Q
     ||||||||||| ||||||||    
T  55267908 gtgtacaaatatcattgctct 55267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 29407023 - 29406972
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 213  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  29407023 ttcctttttctctctctattattttttaccaatcaaaatagagaaaaccaaa 29406972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 40721971 - 40721900
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaa 212  Q
    |||||||| || || ||||| |||| ||||||||||||||||||||| |||||| |||| |||| |||||||    
T  40721971 atgatgttcttttcctctctcttcctttttctctctccattatttttgaccaataaaaaaagagaaaaacaa 40721900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 42178057 - 42177934
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||| || |||| |||||| |||| |||||| |||| ||||||||| |||||| | || |||| ||||||||||| | |||||| || |||| || ||     
T  42178057 atgatatttttattttctcttttcctttttctatctctattatttttaaccaataagaagagagaaaaacaaagttgttaccaaagttatcatcaattga 42177958  T
Q  241 atgtacaaatattattgctctttt 264  Q
    || ||||||||| | |||||||||    
T  42177957 atatacaaatatcactgctctttt 42177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 45779298 - 45779186
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||  ||||| || | ||||||||||||||| ||||| ||||||||||| ||||  |||            ||||||||||||||||| |    
T  45779298 atgatgttattattctctctctttctttttctctctccattgtttttgaccaatcaaaagagagagaaa------------caaaattgtcattaaatag 45779211  T
Q  241 atgtacaaatattattgctcttttc 265  Q
    |||||||||||| ||||||||||||    
T  45779210 atgtacaaatatcattgctcttttc 45779186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 610896 - 610982
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaag-ttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||||||||||||||||||||| |||| |||  ||||  ||| || |||||||| ||||||||| ||| || |||||||||    
T  610896 ttttctctctccattattttttaccaataaaaagagaaaaaaaataagattgtcaccaaagttgtcattagatgaatatacaaatat 610982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 4971992 - 4971898
Alignment:
Q  169 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 263  Q
    |||||| | |||| ||||| ||||||||||| |  | |||||||||||||||  |||||| |||||||||  || ||||||||| ||||||||||    
T  4971992 ttctcttttcattgtttttgaccaatcaaaaaaatgaaaaacaaagttatcattaaaattatcattaaatacatatacaaatatcattgctcttt 4971898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 45923446 - 45923515
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaag 214  Q
    ||||||||||  ||||| || | ||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  45923446 atgttattattctctctctttctttttctctctccattatttttgaccaatcaaaa-aaaggaaaacaaag 45923515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 52669616 - 52669498
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||||||| | |||| ||||| || |||||| ||| | |||||| |||| |||| |||||||  || |||| ||| | ||||| ||||||    
T  52669616 atgatggtcttatcttctatcttcctttttccctttccattgtttctgaccaataaaaagagagaaaaacaagattgtcactaaagtggtcataaaatgg 52669517  T
Q  241 atgtacaaatattattgct 259  Q
    |||||||||||| ||||||    
T  52669516 atgtacaaatatcattgct 52669498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 53662420 - 53662330
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    ||||||| |||| ||||| || ||| | || |||| |||||||| ||||||| ||| ||||||| ||||||||||||| |||| |||||||    
T  53662420 tctctcttcattgtttttgactaataagaagagagaaaaacaaaattatcactaaagttgtcatgaaatggatgtacatatatcattgctc 53662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 2193790 - 2193705
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| |||||||  || ||| |||| ||||||| || |||||||||||||||    
T  2193790 ttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatat 2193705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 19910889 - 19910994
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||||| || |||| ||  | |||| |||| || |||| ||||| |||| ||||||| ||    
T  19910889 tctctcttcctttttctctctccattatttttgaccaataaaaataaagaaaaataagataatcaacaaagttatcatcaaatgaatgtccaaatatcat 19910988  T
Q  256 tgctct 261  Q
    | ||||    
T  19910989 tactct 19910994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 32365648 - 32365563
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||| || ||||||| |||| || |||| |||| |||||||| ||||    
T  32365648 ttttctctctccattgtttttgaccaataaaaagagagaaaaataatgttatcatcaaagttatcataaaatagatgtacatatat 32365563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 36512932 - 36513028
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 264  Q
    ||||||||||||||| |||||||||||| |||| ||||  |||  ||||| |||| | ||||||| | |||||||| | ||||||| |||||||||||    
T  36512932 ttttctctctccattgttttttaccaataaaaagagagagaaaagaagttgtcacaagaattgtc-tcaaatggattttcaaatatcattgctctttt 36513028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 35580202 - 35580254
Alignment:
Q  169 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 221  Q
    ||||||||||||||||||| |||||| |||| ||||||||| |||||| ||||    
T  35580202 ttctctctccattatttttgaccaatgaaaagagaggaaaaaaaagttgtcac 35580254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 45176709 - 45176665
Alignment:
Q  172 tctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||    
T  45176709 tctctccattgtttttgaccaatcaaaagagaggaaaacaaagtt 45176665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 20956589 - 20956514
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||||||||  | ||| || | |||||||||| |||| ||||| ||||||||||| |||| |||||||||||    
T  20956589 atgatgttattattctttctctttctttttctctcttcattgtttttgaccaatcaaaagagagaaaaacaaagtt 20956514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 43358703 - 43358766
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    ||||||||||| |||  |||| |||||||||||||||| ||||||||||| |||  ||||||||    
T  43358703 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaaattgt 43358766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 44170626 - 44170559
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaa 208  Q
    |||||||||||||| ||||| |||| |||||||| || ||| ||||| | ||||||||| ||||||||    
T  44170626 atgatgttattatcctctctcttcctttttctctgtcaattgtttttgatcaatcaaaagagaggaaa 44170559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 9162145 - 9162219
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||||||||    
T  9162145 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgt 9162219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 33484087 - 33483993
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||||||||||||| ||||| | |||| | || |||| |||  || ||| |||||||| ||||||| || ||||||||||||||| ||| ||||    
T  33484087 ttttctctctccattgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcattactct 33483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 47519701 - 47519607
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||||||||||||||||||| || ||| | || | || ||||||| ||| ||| | || || ||||| ||||||||||||||||| | ||||||    
T  47519701 ttttctctctccattatttttaactaataagaagaaagaaaaacaaggttgtcaactaagttatcattcaatggatgtacaaatatcactgctct 47519607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 54165092 - 54165058
Alignment:
Q  227 ttgtcattaaatggatgtacaaatattattgctct 261  Q
    |||||||||||||||||||||||||| ||||||||    
T  54165092 ttgtcattaaatggatgtacaaatatcattgctct 54165058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 439294 - 439327
Alignment:
Q  223 aaaattgtcattaaatggatgtacaaatattatt 256  Q
    |||||||||||||||||||||| |||||||||||    
T  439294 aaaattgtcattaaatggatgttcaaatattatt 439327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 1562517 - 1562468
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  1562517 ttttctctctctattatttttgaccaatcaaaaaagagaaaaccaaagtt 1562468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 12694361 - 12694316
Alignment:
Q  215 ttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    ||||||||||||||||||||| || ||| ||||||||| |||||||    
T  12694361 ttatcaccaaaattgtcattagatagatatacaaatatcattgctc 12694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 13182426 - 13182515
Alignment:
Q  172 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    |||||| ||| ||||| |||||| |||| |||| |||||||  |||||| |||| ||||||| || | ||||||||||||| ||| ||||    
T  13182426 tctctctattgtttttaaccaataaaaaaagagaaaaacaagattatcatcaaagttgtcatcaatttgatgtacaaatatcattactct 13182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 13267459 - 13267375
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || |||| ||| |||||||||    
T  13267459 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttttcatcaaagttgt-atgaaatcgatttacaaatat 13267375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 18568796 - 18568711
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||| |||| ||||| |||||| | || | || ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  18568796 ttttctctcttcattgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 18568711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 20056472 - 20056557
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||| ||| ||||| |||||| | || |||| ||| |||  || |||||||| ||||||| || |||||||||||||||    
T  20056472 ttttctctctcaattgtttttgaccaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatat 20056557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 24154704 - 24154794
Alignment:
Q  169 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||||||||||| ||||| |||||  |||| |||  |||| | |||| ||| ||||||| ||||||||| |||||||||||||  |||||||    
T  24154704 ttctctctccattgtttttgaccaacaaaaaaaga--aaaatatagttgtcatcaaaattatcattaaatagatgtacaaatatcgttgctct 24154794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 36812384 - 36812335
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  36812384 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 36812335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 39844250 - 39844197
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    |||||||||| ||||||||||||||| ||||| |||||| |||| |||| ||||    
T  39844250 tctctattcctttttctctctccattgtttttgaccaataaaaagagagaaaaa 39844197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 39881011 - 39880962
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  39881011 ttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagtt 39880962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 45923517 - 45923550
Alignment:
Q  228 tgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||||||||||||||||||||||| ||||||||    
T  45923517 tgtcattaaatggatgtacaaatatcattgctct 45923550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 48743800 - 48743849
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  48743800 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 48743849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 8681020 - 8681116
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| ||||||||||||||| ||||| | |||| | || ||   ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  8681020 tctctcttcctttttctctctccattgtttttgatcaataagaagaggaaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 8681116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 12241137 - 12241196
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||| ||||||||||| |||||||| |||||||||||| |||| |||| ||||||    
T  12241137 tctcttttcctttttctctctctattatttt-taccaatcaaaagagagaaaaataaagtt 12241196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 19245967 - 19246031
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    ||||| |||| |||||||| |||||||||||| ||||||  ||| |||||||||  |||||||||    
T  19245967 tctctcttcctttttctctttccattatttttgaccaatagaaagagaggaaaaggaagttatca 19246031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 29949680 - 29949596
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 225  Q
    |||||||| ||||| ||||| |||| |||||||| || ||| |||||||||||| | || |||| |||| |||||| ||| ||||    
T  29949680 atgatgttcttatcctctctcttcctttttctctatctattgttttttaccaataagaagagagaaaaagaaagttgtcatcaaa 29949596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 30866445 - 30866533
Alignment:
Q  172 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    |||||| ||||||||| || ||| |||| |||| |||  ||| || |||||||| || ||||||||||||| | ||||||| |||||||    
T  30866445 tctctctattatttttgactaataaaaagagagaaaactaaaattgtcaccaaagttatcattaaatggatatccaaatatcattgctc 30866533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 31413772 - 31413704
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    |||| ||||||||||||||||||||| |||||| |||| |||| | ||||| ||| |||| ||| ||||    
T  31413772 ttcctttttctctctccattatttttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgt 31413704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 33820328 - 33820269
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||| ||||||    
T  33820328 tctcttttcctttttctctctctattattttt-accaatcaaaagagagaaaaataaagtt 33820269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 36792417 - 36792481
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    |||| ||||||||||||||||||||| |||||| |||| ||||  |||  ||||| |||||||||    
T  36792417 ttcctttttctctctccattatttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 36792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 38952774 - 38952842
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  || ||||||| ||||||||    
T  38952774 ttcctttttctctctccattgtttttgaccaatgaaaaaagagaaaaaagaaattatcacaaaaattgt 38952842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 40756000 - 40756060
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||||    
T  40756000 tctctcttcctttttctctctctattatttttgaccaatcaaagaagagaaaatcaaagtt 40756060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 41119506 - 41119458
Alignment:
Q  168 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||||||||| ||||| |||||| |||| ||||||||| ||||||    
T  41119506 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagtt 41119458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 46173615 - 46173659
Alignment:
Q  155 ttctctattcccttttctctctccattattttttaccaatcaaaa 199  Q
    |||||| |||| ||||||||||||||| |||||||||||| ||||    
T  46173615 ttctctcttcctttttctctctccattgttttttaccaatgaaaa 46173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 7077347 - 7077227
Alignment:
Q  140 gatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 239  Q
    ||||||||| ||||| || || |||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||| |||||||||||||    
T  7077347 gatgatgttgttatcctcactcttcctttttctctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatg 7077248  T
Q  240 gatgtacaaatattattgctc 260  Q
    ||||||||||||| |||||||    
T  7077247 gatgtacaaatatcattgctc 7077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 30574384 - 30574261
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  |||||    
T  30574384 atgatggtcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatgg 30574285  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| |||||||||||    
T  30574284 atgtacaaatatcattgctctttt 30574261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 36548387 - 36548265
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| ||||||| ||||| |||| ||||||||||||||| ||||  | |||| ||||||||| ||||||| ||| ||| |||| ||||||||| ||||    
T  36548387 atgatgctattatcctctctcttcctttttctctctccattgttttcaatcaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatgg 36548288  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||||||||||    
T  36548287 atgtacaaatatcattgctcttt 36548265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 19271923 - 19272044
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| | ||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||||||| |||||||||||  ||| |    
T  19271923 atgatgttcttatcctttctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcactaaaattgtcatataatag 19272022  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  19272023 atgtacaaatatcattgctctt 19272044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 26685755 - 26685874
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||||||||| |||| |||||||| | |||| ||||| | | ||||||| ||||||||||||| || | |||||| || ||||||||| |    
T  26685755 atgatgttattatcttctctcttcctttttctcttttcattgtttttaatcgatcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatag 26685854  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  26685855 atgtacaaatatcattgctc 26685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 26955486 - 26955605
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||||||||| |||| |||||||| | |||| ||||| | | ||||||| ||||||||||||| || | |||||| || ||||||||| |    
T  26955486 atgatgttattatcttctctcttcctttttctcttttcattgtttttaatcgatcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatag 26955585  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  26955586 atgtacaaatatcattgctc 26955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 12512857 - 12512981
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  |||||    
T  12512857 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgg 12512956  T
Q  241 atgtacaaatattattgctcttttc 265  Q
    |||||||||||| ||||||||||||    
T  12512957 atgtacaaatatcattgctcttttc 12512981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 32634772 - 32634888
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||  ||||||||||||| | |||||||||||| | || |||| |||||||| ||||||| |||||||||||  |||||    
T  32634772 atgatggtcttatcctctcttttcatttttctctctccaatgttttttaccaataagaaaagagaaaaacaaaattatcactaaaattgtcatggaatgg 32634871  T
Q  241 atgtacaaatattattg 257  Q
    |||||||||||| ||||    
T  32634872 atgtacaaatatcattg 32634888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 3263515 - 3263396
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| || | ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  3263515 atgatggtcttatcctctctctttctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 3263416  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  3263415 atgtacaaatatcattgctc 3263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 15622108 - 15622227
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  15622108 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 15622207  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  15622208 atgtacaaatatcattgctc 15622227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 38010936 - 38011059
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||  |||||||| || |||| |||||||||||  ||| |    
T  38010936 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagaaaaaaacaaaattgtcactaaaattgtcatggaatag 38011035  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| |||||||||||    
T  38011036 atgtacaaatatcattgctctttt 38011059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 11464121 - 11464008
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||| ||  ||||||||||||||    
T  11464121 ttatcatctctcttcatttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaa 11464022  T
Q  250 tattattgctcttt 263  Q
    ||| ||||||||||    
T  11464021 tatcattgctcttt 11464008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 12417690 - 12417811
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||| |||||  ||||||||||||||| ||||| |||||  | || |||| || |||||||| |||||||| ||||| | |||| |    
T  12417690 atgatgttgttatcctctgtattcatttttctctctccattgtttttaaccaaaaagaagagagaaacacaaagttgtcaccaaagttgtcgtgaaatag 12417789  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  12417790 atgtacaaatatcattgctctt 12417811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 31006123 - 31006196
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||||||||| ||||| |||| ||||||||   |||||||||| ||||||||||||||||||||||||||||    
T  31006123 atgatgttattatcctctctcttcctttttctctt--cattatttttgaccaatcaaaatagaggaaaacaaagtt 31006196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 30776709 - 30776804
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    |||| ||||||||||||||||||||||| |||| ||||  ||||||| || |||| ||| ||||||| ||||  |||||||||||| |||||||||    
T  30776709 ttttttctctccattattttttaccaataaaaagagagagaaacaaatttgtcactaaatttgtcatgaaataaatgtacaaatatcattgctctt 30776804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 35972638 - 35972756
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||  ||||| || | ||||||||||||||||||||| | |||| |||| |||| |||| || ||| ||||||||||| ||| ||||| |    
T  35972638 atgatgttattat--tctctcttgctttttctctctccattattttt-atcaataaaaagagag-aaaataaggttgtcaccaaaattatcaataaattg 35972733  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||||||||||    
T  35972734 atgtacaaatatgattgctcttt 35972756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 4292873 - 4292967
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    |||||||||||| || ||||| |||||| | ||||||| ||||||||||| ||| |||||||||||| ||||| |||| ||||||| ||| ||||    
T  4292873 ttttctctctccgttgtttttgaccaataagaatagagaaaaacaaagttgtcaacaaaattgtcatcaaatgaatgtccaaatatcattactct 4292967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 3154641 - 3154528
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  ||||||||||||||| ||||| || ||| |||| |||| |||| |||||| |||||||||||||||| || |  |||||||||    
T  3154641 ttatcatctctcttcatttttctctctccattttttttaactaataaaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaa 3154542  T
Q  250 tattattgctcttt 263  Q
    ||| ||| ||||||    
T  3154541 tatcattactcttt 3154528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 8959250 - 8959335
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| || ||||| ||||||| || |||||||||||||||    
T  8959250 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatat 8959335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 266
Target Start/End: Original strand, 9594542 - 9594667
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  ||| || ||| |||| ||| |||||||  |||||    
T  9594542 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgtcatggaatgg 9594641  T
Q  241 atgtacaaatattattgctcttttca 266  Q
    |||||||||||| |||||||||||||    
T  9594642 atgtacaaatatcattgctcttttca 9594667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 28501681 - 28501777
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaa 237  Q
    |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||| ||||    
T  28501681 atgatgttcttatcatctctcttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcactaaa 28501777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 33823701 - 33823585
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  33823701 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 33823602  T
Q  241 atgtacaaatattattg 257  Q
    |||||||||||| ||||    
T  33823601 atgtacaaatatcattg 33823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 9596821 - 9596702
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  ||||     
T  9596821 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatga 9596722  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  9596721 atgtacaaatatcattgctc 9596702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 41192651 - 41192726
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||| ||||| || || |||| ||||||||||||||| ||||| ||||||||||| |||| |||||||||||    
T  41192651 atgatgttgttatcctcactcttcctttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaagtt 41192726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 22920499 - 22920377
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| | | |||||||  ||| |    
T  22920499 atgatgttcttatcatctctcttcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactatagttgtcatgtaatag 22920400  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| || |||||||    
T  22920399 atgtacaaatatcatcgctcttt 22920377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 17489438 - 17489523
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||||||| ||||||| || |||||||||||||||    
T  17489438 ttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatat 17489523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 4954530 - 4954649
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| ||| || | || |||| ||||||| ||| |||| ||| |||| ||  |||||    
T  4954530 atgatggtcttatcctctctcttcctttttctctctccattgtttttgacccataagaagagagaaaaacaaggttgtcactaaagttgttatagaatgg 4954629  T
Q  241 atgtacaaatattattgctc 260  Q
    ||||| |||||| |||||||    
T  4954630 atgtagaaatatcattgctc 4954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 10522848 - 10522958
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| || | ||  |||| || ||||||    
T  10522848 ttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttattatggaatgaatatacaaa 10522947  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  10522948 tatcattgctc 10522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 34381091 - 34381163
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaatt 228  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||| ||||| |||| ||||||    
T  34381091 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaatt 34381163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 12401282 - 12401365
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaat 250  Q
    |||||| |||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| ||||||| ||||||||||||||||    
T  12401282 ttttctgtctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaat 12401365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 25345402 - 25345521
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||  ||| ||||| |||||| | || |||| |||| ||  || |||| |||||||| ||  |||||    
T  25345402 atgatggtcttatcatctctcttcctttttctctctttattgtttttgaccaataagaagagagaaaaataagattgtcactaaaattgttatggaatgg 25345501  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  25345502 atgtacaaatatcattgctc 25345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 10232578 - 10232648
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| |||||||||||||||| |||| |||||| |||| |||| ||||  ||||| |||||||||    
T  10232578 tctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaa 10232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 12661939 - 12661869
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| |||||||||||||||| |||| |||||| |||| |||| ||||  ||||| |||||||||    
T  12661939 tctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaa 12661869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 34888846 - 34888884
Alignment:
Q  227 ttgtcattaaatggatgtacaaatattattgctcttttc 265  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  34888846 ttgtcattaaatggatgttcaaatattatttctcttttc 34888884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 372701 - 372616
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||| |||| ||||| || ||| |||| | || ||| ||| ||| ||||||||||| |||| || |||||||||||||||    
T  372701 ttttctctcttcattgtttttgactaataaaaagatagaaaagcaaggttgtcaccaaaattatcatcaattggatgtacaaatat 372616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 14914460 - 14914544
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||  ||||||||||| ||| |||| || | || ||||||||||||||||||    
T  14914460 ttttctctctccattgtttttgaccaataagaagagataaaaacaaagttgtcatcaaagttat-atgaaatggatgtacaaatat 14914544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 20719996 - 20719912
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||||||||| |||||| |||| ||||  |||  ||||| |||| ||| ||||| | |||||||||| |||||||    
T  20719996 ttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtc-tcaaatggatgttcaaatat 20719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 25038150 - 25038223
Alignment:
Q  147 ttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    |||||||  ||||| |||| ||||||||||| ||||||||| ||||||||||| |||  |||  ||||||||||    
T  25038150 ttattattctctctcttcctttttctctctctattatttttaaccaatcaaaagagataaaactaaagttatca 25038223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 31006195 - 31006228
Alignment:
Q  227 ttgtcattaaatggatgtacaaatattattgctc 260  Q
    |||||||||||||||||||||||||| |||||||    
T  31006195 ttgtcattaaatggatgtacaaatatcattgctc 31006228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 32873130 - 32873081
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  32873130 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 32873081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 16553568 - 16553640
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 213  Q
    |||||||| |||| || ||| |||| ||||||||||||||| ||||| | ||||||||| |||  ||||||||    
T  16553568 atgatgttgttatattttctcttcctttttctctctccattgtttttgatcaatcaaaagagataaaaacaaa 16553640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 36416054 - 36415994
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||| ||||||||||| | ||||||| ||||||||||| |||| ||| |||||||    
T  36416054 tctctcttcctttttctctctctagtatttttgaccaatcaaaagagagaaaaccaaagtt 36415994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 39595353 - 39595448
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||| || |||||| ||| |||||||    
T  39595353 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatggttgttcaaatat 39595448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 33881712 - 33881585
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| |||||||| |  ||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||     
T  33881712 atgatgttattatcctctctcttcctttttctctttttattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaaattatcattaaatga 33881613  T
Q  241 atgtacaaatattattgctcttttcaat 268  Q
    |||||||||||| ||||||| |||||||    
T  33881612 atgtacaaatatcattgctcatttcaat 33881585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 260
Target Start/End: Original strand, 5900926 - 5901069
Alignment:
Q  115 aattgagaaatgatatttgtacacagatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaag 214  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||| || | |||||||||||||||||||||||| ||| | || |||| |||| ||      
T  5900926 aattgagaaatgatatttgtacaca--tgatgttcttatcatctctctttctttttctctctccattattttttactaataacaaaagagaaaaataaga 5901023  T
Q  215 ttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    ||||||| ||| ||||||| |||| ||||||||||||| |||||||    
T  5901024 ttatcactaaagttgtcatgaaattgatgtacaaatatcattgctc 5901069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 17157228 - 17157316
Alignment:
Q  172 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    |||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  17157228 tctctccattgtttttgaccaatcaaaagagagaaaagcaaagttatcaccaaagttgtcattaaattgatgtacaaatatcattgctc 17157316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 29609856 - 29609764
Alignment:
Q  170 tctctctccattatttttt-accaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||||| ||||||||||| || |||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||||||||    
T  29609856 tctctcttcattattttttgacaaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaattgatgtacaaatatcattgctct 29609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 26041374 - 26041493
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||  ||||| |||| |||| |||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||||| ||||||    
T  26041374 atgatgttcttattctctctcttcctttttttctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatgg 26041473  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  26041474 atgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 27164844 - 27164725
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| |||||| | |||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  |||||    
T  27164844 atgatggtcttatcctctctcttcctttttctttttccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatgg 27164745  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  27164744 atgtacaaatatcattgctc 27164725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 30864424 - 30864305
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  30864424 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcatggaatgg 30864325  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  30864324 atgtacaaatatcattgctc 30864305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 10014936 - 10014851
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||| || |||||||| ||||||| || |||||||||||||||    
T  10014936 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatat 10014851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 25614802 - 25614717
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| |||||||||||| | || |||| ||||||| ||| |||||||||||||||| || | |||||||||||||    
T  25614802 ttttctctctccattgttttttaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattagatgtacaaatat 25614717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 42060747 - 42060832
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||| |||||||||| ||||| ||||||||||| |||| ||  ||||||| |||||||| |||||||||||| |||||||||||||    
T  42060747 ttttttctctccattgtttttgaccaatcaaaagagagaaaggcaaagttgtcaccaaagttgtcattaaatagatgtacaaatat 42060832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 44511203 - 44511324
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||  ||||| |||| |||| |||| ||||| ||||| |||||| | || |||| |||||||| || |||| ||| ||||||| ||||||    
T  44511203 atgatgttcttattctctctcttcctttttttctccccattgtttttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaatgg 44511302  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  44511303 atgtacaaatatcattgctctt 44511324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 39369381 - 39369485
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||||||||  |||||| ||    
T  39369381 tctctcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcat 39369480  T
Q  256 tgctc 260  Q
    |||||    
T  39369481 tgctc 39369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 33050247 - 33050366
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || ||||  |||||| ||| |||| ||| ||||||| ||||||    
T  33050247 atgatggtcttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatgg 33050346  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  33050347 atgtacaaatatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 42431787 - 42431898
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  42431787 atgatgatcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 42431886  T
Q  241 atgtacaaatat 252  Q
    ||||||||||||    
T  42431887 atgtacaaatat 42431898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 38978565 - 38978678
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||| ||| ||||||| ||| |||||||||||    
T  38978565 ttatcctctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaa-ggatgtacaaa 38978663  T
Q  250 tattattgctctttt 264  Q
    ||| |||||||||||    
T  38978664 tatcattgctctttt 38978678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 116695 - 116814
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||||| ||| |||  ||||||||||||||| ||||| || ||| |||| | || |||||||  || |||| ||| ||||||| ||||||    
T  116695 atgatggtcttatcttttctcttcatttttctctctccattgtttttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatgg 116794  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  116795 atgtacaaatatcattgctc 116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 30402168 - 30402081
Alignment:
Q  171 ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    |||||| |||| |||||||||||| |||| | ||  |||||||||| ||||||||||| |||| |||| ||||||||||||| |||||||    
T  30402168 ctctcttcattgttttttaccaataaaaagaaag--aaacaaagttgtcaccaaaattatcatgaaatagatgtacaaatatcattgctc 30402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 42476557 - 42476464
Alignment:
Q  159 ctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||| |||||||||||| || ||||| |||||| |||| |||  ||||||| ||| || ||||| ||||||| || |||||||||||||||    
T  42476557 ctattcctttttctctctccgttgtttttgaccaataaaaagagaaaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatat 42476464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 2469771 - 2469819
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagag 204  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||    
T  2469771 tctctcttcctttttctctctccattattttttaccaatgaaaatagag 2469819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 20406605 - 20406725
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| ||   ||| |||||||  |||||||| |||||| |||| |||  ||||||||||| || || || |||| |||||||||    
T  20406605 atgatgtttttatcctctctcttaattttcctctctctgttatttttgaccaataaaaagagaaaaaaacaaagttgtcgccgaagttgttattaaatgg 20406704  T
Q  241 atgtacaaatattattgctct 261  Q
    |||| ||||||| ||||||||    
T  20406705 atgtccaaatatcattgctct 20406725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 29162286 - 29162166
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| | |||| |||| |||| |||||||  || |||| ||| |||||||  ||||     
T  29162286 atgatgatcttatcctctctctttctttttctctctccattgtttttgatcaataaaaagagagaaaaacaagattgtcactaaagttgtcatggaatga 29162187  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  29162186 atgtacaaatatcattgctct 29162166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 23330002 - 23330090
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    |||||||| |||||||||||||||| |||| ||||  |||||| ||| |||||||||||  || |||||| || ||||||||| |||||||    
T  23330002 tctctctctattattttttaccaataaaaagagag--aaacaaggttgtcaccaaaatttccaataaatgaatatacaaatatcattgctc 23330090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 3344955 - 3345044
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 259  Q
    |||||||||||||||||| ||   | |||| |||  ||||||| ||| ||  |||||||||||||||||| |||||||||||| ||||||    
T  3344955 tctctctccattatttttgacatgttaaaagagataaaaacaaggttgtcttcaaaattgtcattaaatgaatgtacaaatatcattgct 3345044  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 8742473 - 8742558
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||| | | |||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  8742473 ttttctctctccattgtttatgatcaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 8742558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 16645623 - 16645554
Alignment:
Q  191 caatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    ||||||||| ||||||||||||| || ||| |||| || |||||||||| ||| |||||||| |||||||    
T  16645623 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 16645554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 17619984 - 17619915
Alignment:
Q  191 caatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    ||||||||| ||||||||||||| || ||| |||| || |||||||||| ||| |||||||| |||||||    
T  17619984 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 17619915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 19880229 - 19880117
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatt-aaatggatgtacaa 248  Q
    ||||| ||||| |||| ||||||||||||||||||||  ||| || | || |||| |||| ||  || |||| ||| |||||||  ||||||||||||||    
T  19880229 ttatcctctctcttcctttttctctctccattattttg-acccataagaagagagaaaaataagattgtcactaaagttgtcatgcaaatggatgtacaa 19880131  T
Q  249 atattattgctctt 262  Q
    ||||||||||||||    
T  19880130 atattattgctctt 19880117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 37385214 - 37385129
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||| ||| ||||| |||||| | || |||| | ||||| ||| |||||||| ||||||| || |||||||||||||||    
T  37385214 ttttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 37385129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 42640933 - 42640986
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  42640933 ttttctctctctattatttttgaccaatcaaaaaagagaaaatcaaagttatca 42640986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 47530272 - 47530187
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||| |||||||||| |||||  ||||| | || | || ||||||| |||||||||||| ||||||| |||| |||||||||||||    
T  47530272 ttttttctctccattgtttttagccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatgaaatagatgtacaaatat 47530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 263
Target Start/End: Complemental strand, 25332480 - 25332385
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 263  Q
    ||||||||||||||| ||||| |||||| ||||  ||||||||  |||||||||  ||| |||| |  |||||| ||| ||||||||||||||||||    
T  25332480 ttttctctctccattgtttttaaccaataaaaag-gaggaaaaagaagttatcaataaagttgttagcaaatggttgttcaaatattattgctcttt 25332385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 2347057 - 2346947
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  |||||||||||||||  |||| |||||| | || | || |||| || ||| |||| ||| ||||||| ||||| |||||||||    
T  2347057 ttatcctctctcttcttttttctctctccattgcttttgaccaataacaagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaa 2346958  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  2346957 tatcattgctc 2346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 19426659 - 19426728
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| |||||||||||||||||||||  ||||| |||| ||| ||||| |||||| |||||||||    
T  19426659 tctctcttcctttttctctctccattatttttatccaatgaaaagaga-gaaaaaaaagttgtcaccaaaa 19426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 22331203 - 22331129
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| | ||||| ||| || | ||||||||    
T  22331203 tctctcttcctttttctctctccattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgt 22331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 43255565 - 43255451
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| |||| |||||||||||||||| || ||| | || |||| |||  ||  || ||||||||||| |||| || | ||||||||||    
T  43255565 ttatcatctctcttcctttttttctctccattatttttgactaataagaagagagaaaagtaagattgtcaccaaaattatcatcaattagatgtacaaa 43255466  T
Q  250 tattattgctctttt 264  Q
    ||| ||| |||||||    
T  43255465 tatcattactctttt 43255451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 47424977 - 47424908
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||| ||| || |||||||||    
T  47424977 tctctcttcctttttctctctccattgtttttaaccaataaaaagagaggaaaa-aaaattgtcaccaaaa 47424908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 21037217 - 21037168
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||||||||||  |||| ||| |||||||||||| |||||||||||    
T  21037217 ttttctctctccattgattttgaccgatcaaaatagagaaaaacaaagtt 21037168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 21153142 - 21153191
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  21153142 ttttctctctctattatttttgaccaatcaaaagagagaaaatcaaagtt 21153191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 30862715 - 30862768
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  30862715 tctctcttcctttttctctctccattatttttgaccaataaaaagagagaaaaa 30862768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 30982346 - 30982293
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    ||||| |||| |||||||| || |||||||||||||||| |||| |||||||||    
T  30982346 tctctcttcctttttctctttcaattattttttaccaataaaaagagaggaaaa 30982293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 36990120 - 36990173
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  36990120 tctctcttcctttttctctctccattatttttaaccaataaaaaaagagaaaaa 36990173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 44894455 - 44894371
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| |||||||||||| |||| ||||  |||  ||||| |||| |||||| || | |||||||||| |||||||    
T  44894455 ttttctctctccattgttttttaccaatgaaaagagagataaaagaagttgtcacaaaaattatc-tcaaatggatgttcaaatat 44894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 34349019 - 34348971
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagag 204  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  34349019 tctctcttcctttttctctctccattgttttttaccaatgaaaagagag 34348971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 37325800 - 37325728
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 239  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || |||| |||||| |||| |||||    
T  37325800 ttttctctctccattgtttttaaccaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaatg 37325728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 37392116 - 37392228
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    |||| |||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  | ||| |||  ||| |||| |  |||||| ||| ||||    
T  37392116 ttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaa 37392215  T
Q  250 tattattgctctt 262  Q
    ||| |||||||||    
T  37392216 tatcattgctctt 37392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 35500 - 35382
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||  ||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| || || |||||||||||||||||| |    
T  35500 atgatgttattattctctctcttcctttttctctctccattatttttgaccaatcaaaagagaggaaaacaaaattttctccaaaattgtcattaaatag 35401  T
Q  241 atgtacaaatattattgct 259  Q
    |||||||||||| ||||||    
T  35400 atgtacaaatatcattgct 35382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 30413736 - 30413620
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 243  Q
    ||||| ||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||    
T  30413736 atgttgttatcctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagaaaagcaaagttgtcaccaaaattgtcattaaatggatg 30413637  T
Q  244 tacaaatattattgctc 260  Q
    ||||||||| |||||||    
T  30413636 tacaaatatcattgctc 30413620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 43936466 - 43936345
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||||||| |||||||||||||||| ||||||| |    
T  43936466 atgatgttattatcttctctcttcc-ttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaaattatcaccaaaattgtgattaaat-g 43936369  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| |||||||||||    
T  43936368 atgtacaaatatcattgctctttt 43936345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 33003887 - 33004007
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||  ||||| |||| ||| ||||||||||| ||||||| |||| |||| ||||||||| || |||||||||||| ||||||||||| ||    
T  33003887 atgatgttattattctctcttttccttttcctctctccattgttttttatcaataaaaacagaggaaaaaaaggttatcaccaaagttgtcattaaaagg 33003986  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  33003987 atgtacaaatatcattgctct 33004007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 12175335 - 12175217
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| |||| ||||| |||| ||||| ||||||||||| |||||||||||||||| |||||||| || |||||||||      
T  12175335 atgatgttattatcctctctcttcctttttttctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttatcattaaataa 12175236  T
Q  241 atgtacaaatattattgct 259  Q
    |||||||||||| ||||||    
T  12175235 atgtacaaatatcattgct 12175217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 10550466 - 10550346
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| ||||||||| ||||||||||| ||| |||| ||||||| ||||||    
T  10550466 atgatgctcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatgg 10550367  T
Q  241 atgtacaaatattattgctct 261  Q
    |||| ||||||| ||| ||||    
T  10550366 atgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 38021420 - 38021539
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||  ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||  ||||||| || |||||||| || ||||||||| |    
T  38021420 atgatgttattattctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagagaaacaaaattgtcaccaaagttatcattaaat-g 38021518  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  38021519 atgtacaaatatcattgctct 38021539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 44484663 - 44484544
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||||| |||| |    
T  44484663 atgatgttcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattg 44484564  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  44484563 atgtacaaatatcattgctc 44484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 36582344 - 36582441
Alignment:
Q  165 ccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    |||||||||||| |||| ||||| |||||| | ||||||| ||||||| ||| |||||||| ||||||| |||||||||||||||||| |||||||||    
T  36582344 ccttttctctcttcattgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctctt 36582441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 37966420 - 37966536
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||||||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| ||||||    
T  37966420 atgatggtcttatcctctctcttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatgg 37966519  T
Q  241 atgtacaaatattattg 257  Q
    |||||||||||| ||||    
T  37966520 atgtacaaatatcattg 37966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 27540079 - 27540158
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    |||||||||||||| ||||| |||| ||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||    
T  27540079 atgatgttattatcctctctcttcctttttctctctccaatgtttttgaccaatcaaaaaagaggaaaacaaagttatca 27540158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 262
Target Start/End: Complemental strand, 3196094 - 3195973
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| | || ||| |||||||  |||||    
T  3196094 atgatgatcttatcatctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatgg 3195995  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  3195994 atgtacaaatatcattgctctt 3195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 33030102 - 33029989
Alignment:
Q  148 tattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtaca 247  Q
    ||||||| | ||| |||| ||||||||||||||| ||||  |||||| ||||||||| ||||||| ||| ||| |||| ||||||||| || ||||||||    
T  33030102 tattatcctttctcttcctttttctctctccattgttttcaaccaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatagatgtaca 33030003  T
Q  248 aatattattgctct 261  Q
    ||||| ||||||||    
T  33030002 aatatcattgctct 33029989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 5962728 - 5962813
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||||||||||||||| |||| || | |||||||||||||    
T  5962728 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcaccaaaattatcatcaattagatgtacaaatat 5962813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 22353179 - 22353066
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 243  Q
    ||||| ||||| ||||| |||| |||||||| | |||| ||||  |||||| | || |||| || |||| ||||||||||||||| ||||||||||||||    
T  22353179 atgttgttatcctctctcttcctttttctcttttcattgttttcgaccaataagaagagagaaatacaaggttatcaccaaaattatcattaaatggatg 22353080  T
Q  244 tacaaatattattg 257  Q
    ||||||||| ||||    
T  22353079 tacaaatatcattg 22353066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 30973983 - 30973895
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 244  Q
    ||||| |||| ||||||||||||||| ||||| |||||| ||||  ||| ||||||||||||||| |||||||||| | ||||||||||    
T  30973983 tctctcttcctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaagttatcatcaaaattgtcttcaaatggatgt 30973895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 23048069 - 23047971
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| |||||||    
T  23048069 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 23047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 29871353 - 29871239
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || ||||  |||||||||| |||||||| ||||||| |||| |||| |||||    
T  29871353 ttatcctctctcttcttttttctctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaagttgtcatgaaatagatggacaaa 29871254  T
Q  250 tattattgctctttt 264  Q
    ||| || ||||||||    
T  29871253 tatcatggctctttt 29871239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 6884974 - 6885095
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||  |||||| |||||||| ||||| || ||| | || |||| ||||||||||| |||| ||| ||||||| |||||     
T  6884974 atgatggtcttatcctctctcttcttttttctatctccattgtttttgactaataagaagagagaaaaacaaagttgtcactaaagttgtcatgaaatga 6885073  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  6885074 atgtacaaatatcattgctctt 6885095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 12192026 - 12192122
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| ||||||||||||||| ||||| |||||| ||||||||| ||| ||| ||| |||||||| || | || || |||||||||||||||    
T  12192026 tctctcttcctttttctctctccattgtttttgaccaataaaaatagagaaaagcaaggttgtcaccaaagttattatcaattggatgtacaaatat 12192122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 9695042 - 9694955
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatatta 254  Q
    |||||||||| |||||||||| ||| || ||||||||| ||| ||| ||| |||||||| ||||||| || ||||| |||||||||||    
T  9695042 ttttctctcttcattatttttgaccgataaaaatagagaaaagcaaggttgtcaccaaagttgtcatcaattggatttacaaatatta 9694955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 36383526 - 36383633
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||| || |||| |    
T  36383526 atgatgttcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatgaaattg 36383625  T
Q  241 atgtacaa 248  Q
    ||||||||    
T  36383626 atgtacaa 36383633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 30192358 - 30192236
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||| || ||||| |||||||||  |||||| |||||||| |||||||||||| |||| |||| ||| ||| ||| ||  | ||||| |||| || |||    
T  30192358 atgatatttttatcctctctattcatttttctttctccattgttttttaccaataaaaaaagagaaaagcaaggttttcgtccaaattatcatcaattgg 30192259  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||| ||||||    
T  30192258 atgtacaaatatcattactcttt 30192236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 36909824 - 36909740
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || ||||||||||||||||||    
T  36909824 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatggatgtacaaatat 36909740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 4097068 - 4097128
Alignment:
Q  201 agaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    |||| ||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||    
T  4097068 agagaaaaacaaggttgtcaccaaaattgttattaaatggatggacaaatatcattgctct 4097128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 38246758 - 38246638
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||| ||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||||||  ||| |    
T  38246758 atgatggtcttatcctctctcttcctttttctccctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaattg 38246659  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  38246658 atgtacaaatatcattgctct 38246638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 29893674 - 29893793
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| | |||| | || |||| |||||||| || |||| ||| || ||||  |||||    
T  29893674 atgatggtcttatcctctctcttcctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaacttatcatagaatgg 29893773  T
Q  241 atgtacaaatattattgctc 260  Q
    || ||||||||| |||||||    
T  29893774 atatacaaatatcattgctc 29893793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 34139030 - 34138959
Alignment:
Q  156 tctctattcccttttctctctccattatttttta-ccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    |||| ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||||| || ||||||    
T  34139030 tctcaattcctttttctctctccattgttttttaaccaatgaaaatagaggaaaaaaaagttgtcgccaaaa 34138959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 23391141 - 23391247
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| |||||| |||||||||||||| | |||| | || |||| ||||||||||| || | ||| || ||||  ||||||||||||||||| ||    
T  23391141 tctctcttcctttttctttctccattatttttgatcaataagaagagagaaaaacaaagttgtcgctaaagttatcatggaatggatgtacaaatatcat 23391240  T
Q  256 tgctctt 262  Q
    | |||||    
T  23391241 tcctctt 23391247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 26809579 - 26809665
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaa-caaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| ||||||  ||| | | ||||| |||| |||||||||||||||||| || || |||||||||||||    
T  26809579 ttttctctctccattgtttttaaccaatagaaaaataagaaaatcaaaattatcaccaaaattgtcactatatagatgtacaaatat 26809665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 12358403 - 12358488
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||| |||| ||||| |||||| |||| | || ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  12358403 ttttctctcttcattgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 12358488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 13466056 - 13466007
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| |||| |||| |||||||||||||||| |||||||||||    
T  13466056 ttttctctctctattaattttgaccaatcaaaatagagaaaaacaaagtt 13466007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 14954591 - 14954522
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 225  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||||| ||| ||| ||||    
T  14954591 tctctcttcctttttctctctccattgttttttaccaattaaaaaagagaaaaacaaggttgtcatcaaa 14954522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 260
Target Start/End: Original strand, 33857307 - 33857400
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    ||||||||||||||| ||||| |||||| | || | || |||| |||||| |||||||| ||||| |||||| |||||  |||||| |||||||    
T  33857307 ttttctctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattgctc 33857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 27307223 - 27307131
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    |||||||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| |||||||  |||||||||| |||||| |||||||||    
T  27307223 tctctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatggaatggatgtataaatatcattgctctt 27307131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 39133786 - 39133858
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 213  Q
    |||||||| |||| |||| | || | ||||||||||||||||||||| |||||| |||| |||| ||||||||    
T  39133786 atgatgttgttattttctttcttactttttctctctccattatttttaaccaataaaaaaagagaaaaacaaa 39133858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 1298258 - 1298333
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||||||  |||| |||  |||||| ||| |||| ||||| ||||||||||| ||||||||| ||||||    
T  1298258 atgatgttattatcccctctcttcttttttctttcttcattgtttttgaccaatcaaaagagaggaaaataaagtt 1298333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 3299112 - 3298993
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||  ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  ||| ||  || ||||||||||| ||||||||| |    
T  3299112 atgatgtcgttatcctctctcttactttttctctctccattgtttttaaccaataagaagagagagaaataagattgtcaccaaaattatcattaaatag 3299013  T
Q  241 atgtacaaatattattgctc 260  Q
    ||||| || ||| |||||||    
T  3299012 atgtataattatcattgctc 3298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 6851666 - 6851591
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||| ||||  ||||| |||  ||||||||||| ||| ||||| ||||||||||| |||| |||||||||||    
T  6851666 atgatgttgttattctctctcttcatttttctctctcaattgtttttgaccaatcaaaagagagaaaaacaaagtt 6851591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 28165208 - 28165315
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| ||||  ||| || ||| |||  ||| |||| |  |||||| ||| ||||||||||    
T  28165208 tctctcttcctttttctctctccattatttttgaccaataaaaagagagagaaaaaaggttgtcatgaaagttgttagcaaatggttgttcaaatattat 28165307  T
Q  256 tgctcttt 263  Q
    | ||||||    
T  28165308 ttctcttt 28165315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 37480090 - 37480133
Alignment:
Q  355 gcctggtggtattggcctgggacctgagtctgtgctcctcctca 398  Q
    |||||||||||||||| |||||||||||  ||||||||||||||    
T  37480090 gcctggtggtattggcttgggacctgagagtgtgctcctcctca 37480133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 6639470 - 6639416
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagag 204  Q
    |||| |||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  6639470 ttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagag 6639416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 260
Target Start/End: Complemental strand, 6851597 - 6851559
Alignment:
Q  222 caaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  6851597 caaagttgtcattaaatggatgtacaaatatcattgctc 6851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 19913863 - 19913929
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcacc 222  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| |||||| |||||    
T  19913863 tctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacc 19913929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 26321689 - 26321620
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| ||||||||||| ||| ||||| |||||| |||| ||| ||||| ||||||||||||||||    
T  26321689 tctctcttcctttttctctctcaattgtttttaaccaatgaaaagaga-gaaaaaaaagttatcaccaaaa 26321620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 34101073 - 34101131
Alignment:
Q  161 attcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatc 219  Q
    ||||| |||| |||||| ||||||||| |||||| |||||||||||||  |||||||||    
T  34101073 attcctttttttctctctattatttttgaccaataaaaatagaggaaatgaaagttatc 34101131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 39744592 - 39744526
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||| |||||| | || ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  39744592 ttattttctctctacctttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 39744526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 4061983 - 4062032
Alignment:
Q  213 agttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    |||| |||| |||||||||||||||||||||| ||||||| ||| |||||    
T  4061983 agttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctt 4062032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 13104564 - 13104633
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 231  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| |||||||||    
T  13104564 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtc 13104633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 23880174 - 23880227
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  23880174 tctctcttcctttttctctctccatttttttttaccaatgaaaagagagaaaaa 23880227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 32750083 - 32750152
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 231  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| |||||||||    
T  32750083 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtc 32750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 41353478 - 41353417
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaatt 228  Q
    ||||||||||||||||||||| |||||| |||| |||| ||||  ||||| |||| ||||||    
T  41353478 ttttctctctccattatttttaaccaataaaaaaagagaaaaaagaagttgtcacaaaaatt 41353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 16051380 - 16051332
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagag 204  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| ||||    
T  16051380 tctctcttcctttttctctctctattatttttgaccaatcaaaaaagag 16051332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 27540156 - 27540188
Alignment:
Q  230 tcattaaatggatgtacaaatattattgctctt 262  Q
    ||||||||||||||||||||||| |||||||||    
T  27540156 tcattaaatggatgtacaaatatcattgctctt 27540188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 31635802 - 31635742
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||||    
T  31635802 tctctcttcctttttctctctctattatttttgaccaatcaaagaagagaaaatcaaagtt 31635742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 38572018 - 38572114
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||  || |||||||||||| | ||| |||||| | || |||| ||||||| ||| |||||||| |||| || || || ||||||||||||    
T  38572018 tctctattcatttctctctctccattgtctttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgttatcaattgaatgtacaaatat 38572114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 11089664 - 11089763
Alignment:
Q  165 ccttttctctctccattatttttta-ccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 263  Q
    ||||||||||||| ||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11089664 ccttttctctctctattattttttaaccaatcaaaaaagagaaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcttt 11089763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 43587705 - 43587828
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||  ||||| |||| |||||||||||||||  |||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||    
T  43587705 atgatgttgttattctctctcttcctttttctctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatgg 43587804  T
Q  241 atgtacaaatattattgctctttt 264  Q
    || ||||||||| |||||||||||    
T  43587805 atatacaaatatcattgctctttt 43587828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 34972131 - 34972248
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||||||||| |||  |||| |||||||||||||||| | ||||||||| |||| |||||||| || |||||||| |||||||||||| |    
T  34972131 atgatgttattatcttctctcttc--ttttttctctccattatttttgatcaatcaaaaaagagaaaaacaaaattgtcaccaaagttgtcattaaatag 34972228  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  34972229 atgtacaaatatcattgctc 34972248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 38504234 - 38504353
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| || || |||  ||||||||||||||| ||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||    
T  38504234 atgatgttgttatcctcactcttcatttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatgg 38504333  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  38504334 atgtacaaatatcattgctc 38504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 43602430 - 43602311
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| ||||||  ||||| |||| |||||| |||  ||| ||||| ||||||||||| ||||  |||||||||| |||||||| ||||||||||||||    
T  43602430 atgatggtattattctctcttttcctttttctttctatattgtttttgaccaatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaatgg 43602331  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  43602330 atgtacaaatatcattgctc 43602311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 23952562 - 23952673
Alignment:
Q  145 tgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 244  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||| |||| |||| |||||||| ||||||| ||| ||||||| |||| || ||    
T  23952562 tgttcttatcttctctatttc-ttttctctctccattatttttgaccaataaaaaaagagaaaaacaaaattatcactaaagttgtcataaaatagacgt 23952660  T
Q  245 acaaatattattg 257  Q
    |||||||| ||||    
T  23952661 acaaatatcattg 23952673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 1065481 - 1065604
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||  | || | || ||||||| |||||||| ||| |||||||  |||||    
T  1065481 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaaaaagaagatagaaaaacaaggttatcactaaagttgtcatggaatgg 1065580  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| |||||||||||    
T  1065581 atgtacaaatatcattgctctttt 1065604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 30927938 - 30927819
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| ||||||    
T  30927938 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatgg 30927839  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  30927838 atgtacaaatatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 41273579 - 41273702
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| | || ||| |||||||  |||||    
T  41273579 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatgg 41273678  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| |||||||||||    
T  41273679 atgtacaaatatcattgctctttt 41273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 6105416 - 6105323
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 260  Q
    |||| ||||| |||| ||||| ||||||||||| ||||||||| |||||| |||| ||| ||||| |||||||||||||||| ||| |||||||    
T  6105416 ttttttctctacattgtttttgaccaatcaaaagagaggaaaataaagttgtcactaaagttgtctttaaatggatgtacaagtatcattgctc 6105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 6825269 - 6825161
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| || |||  ||||||| |||||| ||||| ||||||||||||||||    
T  6825269 tctctgttcctttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgtcaataaatagatgtacaaatattat 6825170  T
Q  256 tgctctttt 264  Q
    || ||||||    
T  6825169 tgttctttt 6825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 41293728 - 41293613
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||||||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||| ||||| |||| ||| |||||||  |||||    
T  41293728 atgatggtcttatcttctctcttccattttctctctccattgtttttgaccaataagaagagagaaaaac-aagttgtcactaaagttgtcatggaatgg 41293630  T
Q  241 atgtacaaatattattg 257  Q
    |||||||||||| ||||    
T  41293629 atgtacaaatatcattg 41293613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 39259053 - 39258943
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| |||||||  ||||||  |||||||||||  ||||||||||||||    
T  39259053 ttatcatctctcttcctttttctctctccattgtttttgactaataagaagagagaaaaacaagattatcattaaaattgtcatggaatggatgtacaaa 39258954  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  39258953 tatcattgctc 39258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 11138986 - 11139071
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||| |||||||||| |||||| |||| | || ||||||||||| |||||||| ||||||| || | |||||||||||||    
T  11138986 ttttctctcttcattatttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgtcatcaatttgatgtacaaatat 11139071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 19723213 - 19723093
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||| ||| ||||||| | || |    
T  19723213 atgatggtcttatcctctctcttcctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgtcatgatatag 19723114  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  19723113 atgtacaaatatcattgctct 19723093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 30129500 - 30129584
Alignment:
Q  168 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||||||||||||| |||||| | || |||| ||| ||||||| |||||||| ||||||| || |||||||||||||||    
T  30129500 tttctttctccattatttttgaccaataagaagagagaaaagcaaagttgtcaccaaagttgtcatcaattggatgtacaaatat 30129584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 29509330 - 29509405
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||||||| ||||| |||| |||||||||| |||| ||||| |||||| |||| ||||||||||||||||    
T  29509330 atgatattattatcctctctcttcctttttctctcttcattgtttttgaccaataaaaagagaggaaaacaaagtt 29509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 2597146 - 2597056
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || || ||||||||||||    
T  2597146 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattgaatgtacaaatat 2597056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 33817247 - 33817337
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 257  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || |||| |||||||| || |||| ||||||||||||| ||||    
T  33817247 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatcattg 33817337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 5925145 - 5925230
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||||||||| |||||| | ||||||| |||| || ||| |||  ||| ||||||| ||||||||||||| ||||    
T  5925145 ttttctctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaatggatgtacatatat 5925230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 14228786 - 14228879
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 263  Q
    ||||||| |||| ||||| |||||| |||| |||| |||| ||| || |||| |||||| |||| ||||||||||||| |||| ||||||||||    
T  14228786 tctctcttcattgtttttgaccaataaaaaaagagaaaaataaaattgtcactaaaattatcatgaaatggatgtacatatatcattgctcttt 14228879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 14531683 - 14531804
Alignment:
Q  139 agatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaat 238  Q
    |||||||||| |||||||||||||||  ||||||||||||||| ||||  | |||| | || |||| |||| || ||| |||  ||  ||||||| | ||    
T  14531683 agatgatgttcttatcttctctattcatttttctctctccattgttttagatcaataagaagagagaaaaataaggttgtcattaatgttgtcatgagat 14531782  T
Q  239 ggatgtacaaatattattgctc 260  Q
     |||||||||||||||||||||    
T  14531783 agatgtacaaatattattgctc 14531804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 37562133 - 37562037
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| |||||| |||||||| ||||| |||||| | || |||| ||||||| ||| ||| |||| ||||||| || |||||||||||||||    
T  37562133 tctctcttcctttttctttctccattgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatat 37562037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 40211754 - 40211635
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||  ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||||||   || | || |||| ||| |||||    
T  40211754 atgatgttgttattatctctcttactttttctctctccattgtttttaaccaataagaagagagaaaaacaaagtatacaactaagttgttattcaatgg 40211655  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  40211654 atgtacaaatatcattgctc 40211635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 6849466 - 6849408
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaa 208  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  6849466 ttattttctctcttcctttttctctctctattattttttaccaatagaaatagaggaaa 6849408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 11879482 - 11879412
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| |||| ||||  ||||| | |||||||    
T  11879482 tctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgttaccaaaa 11879412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 11896898 - 11896828
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| |||| ||||  ||||| | |||||||    
T  11896898 tctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgttaccaaaa 11896828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 36064103 - 36064205
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| |||| |||||||||||||||| |||||| |||| |||  ||| |||  || |||||||| || |||| || ||||||||||||    
T  36064103 ttatcatctctcttcctttttttctctccattatttttgaccaataaaaagagataaaagcaagtttgtcaccaaagttatcatcaattggatgtacaaa 36064202  T
Q  250 tat 252  Q
    |||    
T  36064203 tat 36064205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 36497734 - 36497836
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||||||||| || | ||||||||||| ||| ||||| |||||| |||| |||| ||||||| ||| | | |||| ||||||| || | ||||||||||    
T  36497734 ttatcttctctcttactttttctctctctattgtttttaaccaataaaaagagagaaaaacaaggttgttatcaaagttgtcatcaattagatgtacaaa 36497833  T
Q  250 tat 252  Q
    |||    
T  36497834 tat 36497836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 43186386 - 43186469
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||||||||  ||||||| || |||| |||||||| ||  |||| ||||||||||||    
T  43186386 ttttctctctccattgtttttgaccaataaaaatagag--aaacaaaattgtcactaaaattgttatggaatgaatgtacaaatat 43186469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 5924900 - 5924985
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||||||||| |||||| | || |||| |||| || ||| |||  ||| ||||||| ||||||||||||| ||||    
T  5924900 ttttctctctccattatttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtacatatat 5924985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 12783815 - 12783762
Alignment:
Q  211 aaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 264  Q
    |||||| |||| |||||||||||||||||||||| ||||||| ||| |||||||    
T  12783815 aaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctttt 12783762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 34765831 - 34765746
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||  || ||| |||| ||||||||||| || | |||||||||||||    
T  34765831 ttttctctctccattgtttttgaccaataaaaaaagagaaaagtaaggttgtcactaaaattgtcatcaattagatgtacaaatat 34765746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 36593778 - 36593673
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| | ||||||||||||| |||||  | ||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| ||    
T  36593778 tctctcttccttcttctctctccattgtttttggctaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcat 36593679  T
Q  256 tgctct 261  Q
    ||||||    
T  36593678 tgctct 36593673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 37033093 - 37033029
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 221  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||| |||||||||||    
T  37033093 tctcttttcctttttctctctccattgtttttgaccaatgaaaa-agaggaaaaaaaagttatcac 37033029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 39153665 - 39153612
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  39153665 ttttctctctctattatttttgaccaatcaaaagagagaaaatcaaagttatca 39153612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 13884380 - 13884472
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcat 233  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| | |||| | || |||| |||||||| || |||| ||| |||||||    
T  13884380 atgatgttcttatcatctctcttcctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaagttgtcat 13884472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 30925652 - 30925577
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    |||| |||||| |||| ||||||||||||||| ||||| |||||| |||| ||| ||||| |||||| |||||||||    
T  30925652 ttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagaga-gaaaaaaaagttgtcaccaaaa 30925577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 40719636 - 40719576
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  40719636 tctctcttcctttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagtt 40719576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 6746041 - 6745926
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaag-ttatcaccaaaattgtcattaaatggatgtacaa 248  Q
    ||||| ||||| |||| ||||||| | ||||| ||||| | |||| | || |||| ||||| ||| || |||| |||||||||||  |||||||||||||    
T  6746041 ttatcctctctcttcctttttctccccccattgtttttaatcaataagaagagagaaaaactaaggttgtcactaaaattgtcatggaatggatgtacaa 6745942  T
Q  249 atattattgctctttt 264  Q
    |||  |||||||||||    
T  6745941 ataccattgctctttt 6745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 41519951 - 41520010
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagagg-aaaacaaagttatcaccaaaatt 228  Q
    |||||||||||| ||||| |||||| |||| ||||| ||||||| |||||||||||||||    
T  41519951 tctctctccattgtttttgaccaataaaaagagaggaaaaacaaggttatcaccaaaatt 41520010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 44086503 - 44086440
Alignment:
Q  157 ctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    |||| ||||||||||||| |||||||||||| ||||||  ||| |||||||||  |||||||||    
T  44086503 ctctcttcccttttctctttccattatttttgaccaatagaaagagaggaaaaggaagttatca 44086440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 6656337 - 6656227
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  |||||||| |||||| ||||| | |||| | || |||| ||||||| ||| |||| |||||| ||||  ||||||||||||||    
T  6656337 ttatcctctctcttcatttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaa 6656238  T
Q  250 tattattgctc 260  Q
    ||  |||||||    
T  6656237 taccattgctc 6656227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 6736739 - 6736629
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||  |||||||| |||||| ||||| | |||| | || |||| ||||||| ||| |||| |||||| ||||  ||||||||||||||    
T  6736739 ttatcctctctcttcatttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaa 6736640  T
Q  250 tattattgctc 260  Q
    ||  |||||||    
T  6736639 taccattgctc 6736629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 7129618 - 7129707
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||| |||||||||||| || ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || ||||| ||||||||||||    
T  7129618 ttcctttttctctctccgttgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatgaatgtacaaatat 7129707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 8888326 - 8888428
Alignment:
Q  151 tatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta-aatggatgtacaaa 249  Q
    |||| ||||| |||| ||||||||||||||| ||||| |||||| | ||  ||| ||| ||| ||| |||||||| |||||| || ||||||| ||||||    
T  8888326 tatcctctctcttcctttttctctctccattgtttttaaccaataagaaatgagaaaatcaaggttgtcaccaaagttgtcactataatggatatacaaa 8888425  T
Q  250 tat 252  Q
    |||    
T  8888426 tat 8888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 20288606 - 20288716
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| | || ||  ||||||||||||||    
T  20288606 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaa 20288705  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  20288706 tatcattgctc 20288716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 21075235 - 21075345
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| | || ||  ||||||||||||||    
T  21075235 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaa 21075334  T
Q  250 tattattgctc 260  Q
    ||| |||||||    
T  21075335 tatcattgctc 21075345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 22836131 - 22836057
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| | ||||| |||||| | ||||||||    
T  22836131 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgt 22836057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 34474028 - 34474137
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagag-gaaaacaaagttatcaccaaaa-ttgtcattaaatggatgtacaaatatt 253  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||||  ||||| ||||||||| |||| || |||||| ||| |||||||     
T  34474028 tctctcttcctttttctctctccattgtttttaaccaatgaaaaaagagagaaaaagaagttgtcaccaaaagttgt-atgaaatggttgttcaaatatc 34474126  T
Q  254 attgctctttt 264  Q
    ||| |||||||    
T  34474127 attactctttt 34474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 35595300 - 35595390
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 257  Q
    |||||| |||||||| |||||||||||| | || |||| ||| ||| ||| |||||||| || |||||| |  ||||||||||||| ||||    
T  35595300 ttttctttctccattgttttttaccaataagaagagagaaaagcaaggttgtcaccaaacttatcattagacagatgtacaaatatcattg 35595390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 9208114 - 9208065
Alignment:
Q  212 aagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||| |||| |||||||||||||||||||||| ||||||| ||| ||||    
T  9208114 aagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctct 9208065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 13565483 - 13565402
Alignment:
Q  183 ttttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 264  Q
    |||||||||||| | |||| || ||| ||| ||| |||  ||| |||| ||||||| ||||||||||||| |||||||||||    
T  13565483 ttttttaccaataagaataaagaaaagcaaggttgtcattaaagttgtgattaaattgatgtacaaatatcattgctctttt 13565402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 27630934 - 27630893
Alignment:
Q  223 aaaattgtcattaaatggatgtacaaatattattgctctttt 264  Q
    ||||||||||| |||||||||||||||||| ||| |||||||    
T  27630934 aaaattgtcataaaatggatgtacaaatatcatttctctttt 27630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 28473537 - 28473484
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 209  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  28473537 tctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaa 28473484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 30608691 - 30608642
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||||||  |||||||||||||||||||| | || |||||||||||    
T  30608691 ttttctctctctgttattttttaccaatcaaaagatagaaaaacaaagtt 30608642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 34970300 - 34970389
Alignment:
Q  172 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    |||||||||| ||||| |||||| | || |||| ||||||||||| | || ||| ||||| ||||||| ||||  |||||| ||||||||    
T  34970300 tctctccattgtttttaaccaataagaagagagaaaaacaaagttgttactaaagttgtccttaaatgaatgtcaaaatatcattgctct 34970389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 39027557 - 39027606
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaa 199  Q
    |||| |||||| || | |||||||||||||||||||||||||||| ||||    
T  39027557 ttattttctctctttctttttctctctccattattttttaccaataaaaa 39027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 11114673 - 11114613
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagag 204  Q
    ||||| |||| |||||| |||| ||||||||||| ||||||||| ||||||  ||||||||    
T  11114673 atgtttttattttctctcttcctttttctctctctattatttttgaccaatagaaatagag 11114613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 22767208 - 22767284
Alignment:
Q  155 ttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 231  Q
    |||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||||    
T  22767208 ttctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtc 22767284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 37568590 - 37568498
Alignment:
Q  170 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    |||||||| ||| ||||| |||||| | || | || ||||||| ||| |||| ||| || | || |||||||||||||||||| |||||||||    
T  37568590 tctctctctattgtttttgaccaataagaaaaaagaaaaacaatgttgtcactaaagttataatgaaatggatgtacaaatatcattgctctt 37568498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 40102102 - 40102150
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagag 204  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  40102102 tctctcttcctttttctctctccatttttttttaccaatgaaaagagag 40102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 40791955 - 40791915
Alignment:
Q  356 cctggtggtattggcctgggacctgagtctgtgctcctcct 396  Q
    |||||||||||||||||||||||| ||  ||||||||||||    
T  40791955 cctggtggtattggcctgggacctcagaatgtgctcctcct 40791915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 10385478 - 10385599
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| |||| ||| |||| || |||||||| || |||||||||||    
T  10385478 atgatgttgttatcctctctattcctttttctctctccattgtttttgaccaatcaaaaaagagaaaagcaaaattgtcaccaaagttatcattaaatgg 10385577  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  10385578 atgtacaaatatcattgctctt 10385599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 43196096 - 43195977
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||  ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| | | |||||||||||||||| |||||||||||| |    
T  43196096 atgatgttgttattctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagaacatcaaagttatcaccaaagttgtcattaaatag 43195997  T
Q  241 atgtacaaatattattgctc 260  Q
    ||||||||||||||||||||    
T  43195996 atgtacaaatattattgctc 43195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 49189211 - 49189096
Alignment:
Q  148 tattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtaca 247  Q
    ||||||| ||||| || | ||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||    
T  49189211 tattatcctctctctttctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtaca 49189112  T
Q  248 aatattattgctcttt 263  Q
    ||||| |||| |||||    
T  49189111 aatatcattgttcttt 49189096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 5383823 - 5383943
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||| |||| ||||| |||| |||||  |||||||||| |||| ||||||||||| |||||||| |||| |||||||||    
T  5383823 atgatgttgttatcctctctcttcctttttttctcttcattgtttttagccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtaattaaatgg 5383922  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  5383923 atgtacaaatatcattgctct 5383943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 37669462 - 37669582
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||| ||||| |||| ||||  ||||| ||| ||||| ||||||||||| |||||| ||||||||| ||||| ||||| ||||||||||     
T  37669462 atgatgttattatcctctctcttcctttttgactctctattgtttttgaccaatcaaaaaagaggagaacaaagttgtcaccgaaattatcattaaatga 37669561  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  37669562 atgtacaaatatcattgctct 37669582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 2257701 - 2257617
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 225  Q
    ||||||||||||||||| || |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||| ||||    
T  2257701 atgatgttattatcttcacttttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcatcaaa 2257617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 6829792 - 6829670
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||||||||| |||||| | || |||| |||||||  || |||| ||| |||||||  |||||    
T  6829792 atgatggtcttatcatctctcttcctttttctctctctattatttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgg 6829693  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||||||||||    
T  6829692 atgtacaaatatcattgctcttt 6829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 251
Target Start/End: Complemental strand, 36669377 - 36669267
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  36669377 atgatgtttttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 36669278  T
Q  241 atgtacaaata 251  Q
    || ||||||||    
T  36669277 atttacaaata 36669267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 13813622 - 13813743
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||| ||  |||||    
T  13813622 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatgg 13813721  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| |||||||||    
T  13813722 atgtacaaatatcattgctctt 13813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 19920852 - 19920949
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 264  Q
    |||||||||| |||| ||||| |||||| | || |||| ||||||||||| |||||||| ||||| ||||||||||||  |||||| |||||||||||    
T  19920852 ttttctctcttcattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctctttt 19920949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 27578246 - 27578366
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | ||||||| ||||||| ||| | || |||||||||||  ||||     
T  27578246 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaatagagaaaaacaaggttgttactaaaattgtcatggaatga 27578345  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  27578346 atgtacaaatatcattgctct 27578366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 26501359 - 26501478
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| |||||||||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||  ||| |||||||  ||| |    
T  26501359 atgatgttcttatcctctctattcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtcatgtaatag 26501458  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  26501459 atgtacaaatatcattgctc 26501478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 39669873 - 39669964
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta 235  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||  |||||| ||||||||| |||| |||||| ||| |||| |||||||||    
T  39669873 atgttattatcatctctatttctttttctctctccattgttttcaaccaataaaaatagagaaaaataaagttgtcatcaaagttgtcatta 39669964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 50035545 - 50035426
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    ||||| || ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || |||| |||| |||||| |||| ||| ||||||| |||| |    
T  50035545 atgatatttttatcatctctcttcctttttctctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgtcatgaaatag 50035446  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  50035445 atgtacaaatatcattgctc 50035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 3291432 - 3291310
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| |||||||| |||||||||||| |||||  | || ||||  |||||| |||||||  |||||||||||  |||||    
T  3291432 atgatggtcttatcatctctcttcctttttctctttccattatttttgaccaaaaagaagagagagaaacaaggttatcattaaaattgtcatggaatgg 3291333  T
Q  241 atgtacaaatattattgctcttt 263  Q
    |||||||||||| ||| ||||||    
T  3291332 atgtacaaatatcattactcttt 3291310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 42843325 - 42843240
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| ||||||||||| |||| || |||||||||||||||    
T  42843325 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatat 42843240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 7371955 - 7371835
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| |||||  ||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||||||  ||| |||||||  |||||    
T  7371955 atgatggtcttatcctctctcctcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcagtaaagttgtcatggaatgg 7371856  T
Q  241 atgtacaaatattattgctct 261  Q
    ||||||| |||| || |||||    
T  7371855 atgtacatatatcatcgctct 7371835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 50777415 - 50777319
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| |||| |||||| ||| ||||| |||||| | || |||| ||||||| ||| |||||||||||||||| || |||||||||||||||    
T  50777415 tctctcttcctttttatctctctattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaatat 50777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 9011709 - 9011820
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| || |||||||| ||||||    
T  9011709 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaacattgtcatgaaatgg 9011808  T
Q  241 atgtacaaatat 252  Q
    ||||||||||||    
T  9011809 atgtacaaatat 9011820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 50797853 - 50797955
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 249  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| |||| |||  |||||||  || |||||||| || |||| || | ||||||||||    
T  50797853 ttatcatctctcttcctttttctctctccattatttttgaccaataaaaagagataaaaacaagtttgtcaccaaagttatcatcaattagatgtacaaa 50797952  T
Q  250 tat 252  Q
    |||    
T  50797953 tat 50797955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 10302324 - 10302271
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    ||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  10302324 ttttctctctctattattttttaccaatcaaaagagagaaaatcaaagttatca 10302271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 25130767 - 25130888
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||| |||| |||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| |||| |    
T  25130767 atgatgatcttatcctctctcttcctttttccctcttcattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatag 25130866  T
Q  241 atgtacaaatattattgctctt 262  Q
    |||||||||||| | |||||||    
T  25130867 atgtacaaatatcactgctctt 25130888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 262
Target Start/End: Original strand, 25995524 - 25995647
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaa--at 238  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| || ||| |||  ||| ||||||| ||  ||    
T  25995524 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgtcatgaaatat 25995623  T
Q  239 ggatgtacaaatattattgctctt 262  Q
     ||||||||||||| |||||||||    
T  25995624 agatgtacaaatatcattgctctt 25995647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 27895752 - 27895649
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||| ||||  |||||| ||    
T  27895752 tctctcttcctttttctctctccatt-tttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatgaatgtcaaaatatcat 27895654  T
Q  256 tgctc 260  Q
    |||||    
T  27895653 tgctc 27895649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 29489366 - 29489243
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || | || ||||||| ||| |||| ||| ||||||| ||||      
T  29489366 atgatggtcttatcctctctcttcttttttctctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtcatgaaatat 29489267  T
Q  241 atgtacaaatattattgctctttt 264  Q
    |||||||||||| | |||||||||    
T  29489266 atgtacaaatatcactgctctttt 29489243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 29362690 - 29362624
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||    
T  29362690 ttatcttctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 29362624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 8670162 - 8670215
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    ||||||||||| ||||||||| ||||||||||| | || |||||||||||||||    
T  8670162 ttttctctctctattatttttgaccaatcaaaagatagaaaaacaaagttatca 8670215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 51193114 - 51193029
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||||||||||||||  ||||| | || |||| ||||||| ||| |||  ||| ||||||| ||||||||||||| ||||    
T  51193114 ttttctctctccattatttttggccaataagaagagagaaaaacaatgttgtcatgaaagttgtcatcaaatggatgtacatatat 51193029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 24749669 - 24749629
Alignment:
Q  221 ccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  24749669 ccaaaattgttattaaatggatgtacaaatatcattgctct 24749629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 27563617 - 27563657
Alignment:
Q  222 caaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  27563617 caaaattgtcattaaatggatgtacaaatatcattgttctt 27563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 42615936 - 42615996
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    |||||||| | ||||||||||| ||||||||| ||||||||||| | || |||||||||||    
T  42615936 tctctatttctttttctctctctattatttttgaccaatcaaaaaatagaaaaacaaagtt 42615996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 43457823 - 43457716
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 243  Q
    |||||||| || ||||| |||| ||||||||||||||| ||||| | |||| |||| | || ||||||| ||| ||| |||| ||||| | |||||||||    
T  43457823 atgttattttcctctctcttcctttttctctctccattctttttgatcaat-aaaaaacagaaaaacaaggttgtcatcaaatttgtcttcaaatggatg 43457725  T
Q  244 tacaaatat 252  Q
    |||| ||||    
T  43457724 tacatatat 43457716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 7078495 - 7078396
Alignment:
Q  153 tcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||| |||| ||| ||||||||||| ||||| |||||| | || ||||  |||||| ||| ||| |||| ||||| | ||||||||||||| ||||    
T  7078495 tcttctctcttccttttcctctctccattgtttttgaccaattagaaaagagagaaacaaggttgtcatcaaagttgtcttcaaatggatgtacatatat 7078396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 15061924 - 15061994
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 226  Q
    ||||| |||| ||||||||||||||| |||||  ||||| |||| |||| |||| |||||| |||||||||    
T  15061924 tctctcttcctttttctctctccattgtttttatccaataaaaagagagaaaaaaaaagttgtcaccaaaa 15061994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 26585180 - 26585122
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaa 199  Q
    |||||| | ||||| ||||| |||| ||||||||||||||||||||| |||||| ||||    
T  26585180 atgatggtcttatcctctctcttcctttttctctctccattatttttgaccaataaaaa 26585122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 46902708 - 46902778
Alignment:
Q  183 ttttttaccaatcaaaatagaggaaaacaaa-gttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||||||| | || ||||||||| ||| ||| |||| ||||||||||| || |||||||||||||||    
T  46902708 ttttttaccaataagaagagaggaaaaaaaaagttgtcactaaaattgtcatcaattggatgtacaaatat 46902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 366748 - 366801
Alignment:
Q  168 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 221  Q
    |||||||||||||| ||||| |||||| |||| ||||||||| |||||| ||||    
T  366748 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtcac 366801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 4618725 - 4618786
Alignment:
Q  158 tctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatc 219  Q
    |||||||| |||| |||||||||||||||| |||||| |||| |||| | ||||| ||||||    
T  4618725 tctattcctttttttctctccattatttttgaccaatgaaaaaagagaacaacaaggttatc 4618786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 22389517 - 22389411
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| |||||| |||||||||||||| |||||| |||| |||| ||||  ||||| |||| ||| |||  || |||||| ||| ||||||| ||    
T  22389517 tctctcttcctttttctttctccattatttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg--atcaaatggttgttcaaatatcat 22389420  T
Q  256 tgctctttt 264  Q
    | |||||||    
T  22389419 tactctttt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 27563551 - 27563620
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 213  Q
    ||||| ||||||| | | |||| ||||||||||||||| ||| | ||||||||||| |||| ||||||||    
T  27563551 atgttgttatcttttatcttcctttttctctctccattgtttatgaccaatcaaaagagagaaaaacaaa 27563620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 51704720 - 51704683
Alignment:
Q  227 ttgtcattaaatggatgtacaaatattattgctctttt 264  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  51704720 ttgtcattaaatggatatacaaatatcattgctctttt 51704683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 51704794 - 51704737
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaa 198  Q
    ||||||||||| | |||| |||||  | ||||||||||||||||||| ||||||||||    
T  51704794 atgatgttattgttttctttattctttcttctctctccattatttttgaccaatcaaa 51704737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 3606060 - 3606024
Alignment:
Q  184 tttttaccaatcaaaatagaggaaaacaaagttatca 220  Q
    |||| |||||||||||||||| |||||||||||||||    
T  3606060 ttttgaccaatcaaaatagagaaaaacaaagttatca 3606024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 8905801 - 8905869
Alignment:
Q  150 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttat 218  Q
    |||| |||||| |||| |||||| |||| ||||||||| |||||||| |  |||| |||||||||||||    
T  8905801 ttattttctctcttcctttttctttctctattatttttgaccaatcatagaagagaaaaacaaagttat 8905869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 25302638 - 25302562
Alignment:
Q  155 ttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 231  Q
    |||||| |||| ||||||||||| ||| ||||| |||||| |||| |||| |||| |||||| ||||  ||||||||    
T  25302638 ttctctcttcctttttctctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacataaattgtc 25302562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 35043712 - 35043608
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| |||| |||||||||||||||| |||||| |||| |||| ||||  | ||| |||  |||||||| |  |||||| ||| ||||||| ||    
T  35043712 tctctcttcctttttatctctccattatttttaaccaataaaaagagagaaaaatgaggttgtcatgaaaattgttagcaaatggttgttcaaatatcat 35043613  T
Q  256 tgctc 260  Q
    |||||    
T  35043612 tgctc 35043608  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 40610308 - 40610403
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||  |||  ||||| |||| ||| ||||| | |||||||||| |||||||    
T  40610308 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtc-tcaaatggatgttcaaatat 40610403  T

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Target: scaffold0172 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 17039 - 17158
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||||||||  ||||| |||  ||||||||||||||| ||||| |||||||| || ||||  |||||||||| |||||||| ||||||||||||||    
T  17039 atgatgttattattctctctcttcttttttctctctccattgtttttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgtcattaaatgg 17138  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  17139 atgtacaaatatcattgctc 17158  T

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Target: scaffold0514 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 1488 - 1383
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  ||||||||||||||||| ||    
T  1488 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcat 1389  T
Q  256 tgctct 261  Q
    ||||||    
T  1388 tgctct 1383  T

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Target: scaffold0085 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 31307 - 31188
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||||| ||||| ||||| |||| |||| |||||||||||||||| |||||| | || |||| ||||||||||| |||| |||||| ||||  ||| |    
T  31307 atgatgttcttatcctctctcttcctttttatctctccattatttttgaccaataagaacagagaaaaacaaagttgtcactaaaattatcatgtaatag 31208  T
Q  241 atgtacaaatattattgctc 260  Q
    |||||||||||| |||||||    
T  31207 atgtacaaatatcattgctc 31188  T

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Target: scaffold0002 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 147263 - 147143
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 240  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  147263 atgatggtcttatcgtctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 147164  T
Q  241 atgtacaaatattattgctct 261  Q
    |||||||||||| ||||||||    
T  147163 atgtacaaatatcattgctct 147143  T

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Target: scaffold0522 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 2496 - 2392
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| | ||||||||||||||||||| |||||| |||| |||| ||| |||  || ||||||||||| |||| || ||||||||||||||| ||    
T  2496 tctctcttccttcttctctctccattatttttgaccaataaaaagagagaaaatcaagattgtcaccaaaattatcatcaattggatgtacaaatatcat 2397  T
Q  256 tgctc 260  Q
    |||||    
T  2396 tgctc 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 249123 - 249028
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 262  Q
    ||||||||||||||| ||||| | |||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| |||||||||    
T  249123 ttttctctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctt 249028  T

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Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 29852 - 29969
Alignment:
Q  147 ttattatcttctctattccctttt-ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgta 245  Q
    |||||||| ||||| |||| |||| ||||||||| | ||| | | |||| |||| |||| ||||||| ||| | || ||| |||||||||||||||||||    
T  29852 ttattatcatctctcttccttttttctctctccaatgtttctgatcaataaaaagagagaaaaacaaggttgtaactaaagttgtcattaaatggatgta 29951  T
Q  246 caaatattattgctcttt 263  Q
    ||||||| |||| |||||    
T  29952 caaatatcattgatcttt 29969  T

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Target: scaffold0119 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 2230 - 2158
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 216  Q
    ||||||||||| ||||| |||| |||||||| |  ||||||||| | ||||||||| ||||||||||||||||    
T  2230 atgttattatcctctctcttcctttttctctttttattatttttgatcaatcaaaagagaggaaaacaaagtt 2158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 5146 - 5254
Alignment:
Q  144 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 243  Q
    ||||| ||||| ||||| |||  |||||||| |||||||||||| |||||| ||||  ||  ||| ||||||| ||||||||||||||| || || |||     
T  5146 atgtttttatcatctctcttcttttttctctttccattatttttaaccaataaaaagtgaaaaaatcaaagttgtcaccaaaattgtcactatatagata 5245  T
Q  244 tacaaatat 252  Q
    |||||||||    
T  5246 tacaaatat 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 18674 - 18777
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 255  Q
    ||||| |||| ||||||||||||||| ||||| || ||| | ||||||| |||| || |||||||| ||| ||||| |  ||||||||||||||||| ||    
T  18674 tctctcttcctttttctctctccattgtttttgactaataagaatagagaaaaataaggttatcactaaagttgtc-tggaatggatgtacaaatatcat 18772  T
Q  256 tgctc 260  Q
    |||||    
T  18773 tgctc 18777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 24763 - 24857
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    ||||||||||||||| ||||| |||||| | || |||| |||| || ||| |||| |||||| |||| |||| |||||||||||||  |||||||    
T  24763 ttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaatatcgttgctct 24857  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 31592 - 31518
Alignment:
Q  156 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 230  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| |||||| |||| ||||||||    
T  31592 tctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 88893 - 88994
Alignment:
Q  162 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 261  Q
    |||| ||||||||||||||| ||||| |||||| | || |||  |||| || ||| |||| ||| || |||| | |||||||||||||||| ||||||||    
T  88893 ttcctttttctctctccattgtttttgaccaataagaaaagaaaaaaataaggttgtcactaaagttatcatgagatggatgtacaaatatcattgctct 88992  T
Q  262 tt 263  Q
    ||    
T  88993 tt 88994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 3424 - 3545
Alignment:
Q  141 atgatgttattatcttctctattcccttttctctctccatt-attttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 239  Q
    |||||| | ||||| ||||| |||| |||||| |||||||| |||||| |||||| | || | || |||| || ||| |||| ||| ||||| | |||||    
T  3424 atgatggtcttatcctctctcttcctttttctttctccatttatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatg 3523  T
Q  240 gatgtacaaatattattgctct 261  Q
     |||||||||||| ||||||||    
T  3524 aatgtacaaatatcattgctct 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 72152 - 72067
Alignment:
Q  167 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 252  Q
    |||||||| |||||||||||| |||||| | ||| ||| ||| ||| ||| |||||||| ||||||  | || |||||||||||||    
T  72152 ttttctctttccattatttttaaccaataagaattgagaaaaccaaggttgtcaccaaagttgtcaccatatagatgtacaaatat 72067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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