View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10104_low_12 (Length: 391)
Name: NF10104_low_12
Description: NF10104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10104_low_12 |
 |  |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 173 - 380
Target Start/End: Original strand, 28629894 - 28630101
Alignment:
Q |
173 |
ttggattacaagggtaattccaacctattacaatcaatgaaacatcaaattaaatctttttcatattgaacaaacatatcttctaatgatttttctcctt |
272 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
28629894 |
ttggattacaagggtaattccaacctattacaatcaatgaaacatcaaattaaatctttttcatattgaacaaacatatcttctaatgatttttctcctt |
28629993 |
T |
 |
Q |
273 |
gacatgcaggaaatttggacattgtgtagaattctaaaaagaaatgtatcacaaaggaaacaaataccagagatgaaacaattagccaacaaacgtcaat |
372 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
28629994 |
gacatgcaggaaatttggacattgtgtagaattctaaaaagaaatgtatcacaaaggaaacaaataccagagatgaaacaattagccaacaaacttcaat |
28630093 |
T |
 |
Q |
373 |
ccgttcat |
380 |
Q |
|
|
|||||||| |
|
|
T |
28630094 |
ccgttcat |
28630101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 21203372 - 21203508
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
|||||||| |||||| |||| || |||||||||||| |||||||||| |||||||||||||||||||||| |||| |||| |||||||||||| ||| |
|
|
T |
21203372 |
ctttagggacatgtgcagccataagctttcttggcaggctacacttt----tgttgctataggatagcctttgccttcctttc-ctcttttgtaaatagg |
21203466 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcattgcttt |
161 |
Q |
|
|
|||||||||||||| || |||||||||||||||||||||||| |
|
|
T |
21203467 |
ttcaggccttaatcctgatttgcattttattttcattgcttt |
21203508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 28615620 - 28615695
Alignment:
Q |
253 |
ttctaatgatttttctccttgacatgcaggaaatttggacattgtgtagaattctaaaaagaaatgtatcacaaag |
328 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |
|
|
T |
28615620 |
ttctaatgatttttctatatgacatgcaggaaatttggacattgtgtagaattttcaaaagaaatgtatcaaaaag |
28615695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 21949800 - 21949748
Alignment:
Q |
110 |
tgtaaacaggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |
|
|
T |
21949800 |
tgtaaacaggttcaggccttaatcctggttttcattttattttgattgctttg |
21949748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 45212918 - 45212962
Alignment:
Q |
68 |
ttttgttgctataggatagcctttggcttcatttctctcttttgt |
112 |
Q |
|
|
|||||||||||||||||| | ||||||||| |||||||||||||| |
|
|
T |
45212918 |
ttttgttgctataggatatcatttggcttcctttctctcttttgt |
45212962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 41309989 - 41310131
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| |
|
|
T |
41309989 |
ctttaggggcatgtgcagccctatgctttcttggcaggctacactttgttttgttgctatagggtagcctttggcgtcctttctctcttttgtaaacagg |
41310088 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||||||||||| |
|
|
T |
41310089 |
ttcaagccttaatcctggtttgcattttattttcattgctttg |
41310131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 34160980 - 34160855
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |
|
|
T |
34160980 |
ctttaggggcatgtgcaaccctatgctttcttggcaagttacactttgttttgttgctataggatagcttttggcttcctttctctcttttgtaaacatg |
34160881 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcatt |
145 |
Q |
|
|
|||||||||||| || |||||||| |
|
|
T |
34160880 |
ctcaggccttaataatgatttgcatt |
34160855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 2049168 - 2049265
Alignment:
Q |
67 |
gttttgttgctataggatagcctttggcttcatttctctcttttgt--aaacaggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| || ||||| || |||||||||||||||| |
|
|
T |
2049168 |
gttttgttgctataggatagcctttggcttcctttctctcttttgtgcaaataggttcaggccttaatcctgatttgctttatattttcattgctttg |
2049265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 12763314 - 12763217
Alignment:
Q |
67 |
gttttgttgctataggatagcctttggcttcatttctctcttttgt--aaacaggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| || ||||| || |||||||||||||||| |
|
|
T |
12763314 |
gttttgttgctataggatagcttttggcttcctttctctcttttgtgtaaacaggttcaggccttaatcctgatttgctttatattttcattgctttg |
12763217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 10457482 - 10457425
Alignment:
Q |
101 |
tctctcttttgtaaacaggttcaggccttaatcgtggtttgcattttattttcattgc |
158 |
Q |
|
|
|||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||| |
|
|
T |
10457482 |
tctctcttgtgtaaacaggttcaggccttaatcctgatttgcattttattctcattgc |
10457425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 13129226 - 13129368
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |
|
|
T |
13129226 |
ctttaggggcatgtgcagccctatgctttcttggcaggctacactttgttttgttgctatagggtagcctttggcttcctttcttacttttgtaaacagg |
13129325 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
13129326 |
ttcaggccttaatcctggtttgcattttattttcattgctttg |
13129368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 52316161 - 52316303
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
T |
52316161 |
ctttaggggcatgtgcagccctatgctttcttggcaagttacactttgttttgttgctataggatagcctttggtttcgtttctctcttttgtaaacagg |
52316260 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||| ||||||||| || ||||||| ||||||||||||||||| |
|
|
T |
52316261 |
ttcatgccttaatcctgatttgcatgttattttcattgctttg |
52316303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 34106437 - 34106295
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
||||| ||||||||| | |||||||||||||||||| | || ||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
T |
34106437 |
ctttaagggcatgtgcaaccctatgctttcttggcaggttatactttattttgttgctatagggtagcctttggcttcctttctctcttttgtaaacagg |
34106338 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
34106337 |
ttcaggccttaatcatggtttgcattttattttcattgctttg |
34106295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 43699463 - 43699604
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
|||||||| |||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
T |
43699463 |
ctttagggacatgtgcagccatatgctttcttggcaagctacacttagttttgttgctataggatagcctttggcttccttttcctcttttgtaaacagg |
43699562 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcattgcttt |
161 |
Q |
|
|
|||||||||||||| | ||||||||| ||||||||||||||| |
|
|
T |
43699563 |
ttcaggccttaatcctcgtttgcattctattttcattgcttt |
43699604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 3525990 - 3526125
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| |
|
|
T |
3525990 |
ctttaggggcatgtgcagctctatgctttcttggcaggttacactttgttttgttgctataggataacctt-ggcttcctttctctcttttgtaaacagg |
3526088 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcatt |
156 |
Q |
|
|
|||||||||||||| || ||||||||||||||||||| |
|
|
T |
3526089 |
ttcaggccttaatcctgatttgcattttattttcatt |
3526125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 27491930 - 27492063
Alignment:
Q |
29 |
catgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggttcaggcct |
128 |
Q |
|
|
|||||| |||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||| |
|
|
T |
27491930 |
catgtgcagccctatgctttcttagtaggctacactttgctttgttgctataggatagcctttggcttcctttctctcttttgtaaatagattcaagcct |
27492029 |
T |
 |
Q |
129 |
taatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
||||| ||||||| |||||||||||||||||||| |
|
|
T |
27492030 |
taatcatggtttgaattttattttcattgctttg |
27492063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 41114626 - 41114744
Alignment:
Q |
41 |
tatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggttcaggccttaatcgtggttt |
140 |
Q |
|
|
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||| |||||| |
|
|
T |
41114626 |
tatgctttcttggcaggctacacttagttttgttgctataggatagcctttggcttc-cttccctcttttgtaaacaggttcagacctt-atcctggttt |
41114723 |
T |
 |
Q |
141 |
gcattttattttcattgcttt |
161 |
Q |
|
|
||||| |||||| |||||||| |
|
|
T |
41114724 |
gcattctattttgattgcttt |
41114744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 45602957 - 45602845
Alignment:
Q |
47 |
ttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggttcaggccttaatcgtggtttgcattt |
146 |
Q |
|
|
||||||||| | ||||||||||||| ||| ||||||||| |||||| || ||||||||||||||||||||||| |||| |||||| || ||||||||| |
|
|
T |
45602957 |
ttcttggcaagttacactttgttttattgatataggatatcctttg---tcctttctctcttttgtaaacaggttgaggctttaatcctgatttgcattt |
45602861 |
T |
 |
Q |
147 |
tattttcattgctttg |
162 |
Q |
|
|
|||||||||||||||| |
|
|
T |
45602860 |
tattttcattgctttg |
45602845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 11084678 - 11084748
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctt |
90 |
Q |
|
|
||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
T |
11084678 |
ctttaggggcatgtgcagtcctatgctttcttggcaggctacactttgttttgttgctatagggtagcctt |
11084748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 11084773 - 11084817
Alignment:
Q |
118 |
ggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
11084773 |
ggttcaggccttaatcctggtttgcattttattttcattgctttg |
11084817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 104; Significance: 9e-52; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 40318539 - 40318404
Alignment:
Q |
27 |
ggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggttcaggc |
126 |
Q |
|
|
|||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
T |
40318539 |
ggcatgtgcaaccctatgctttcttggcaggctacactttgttttgttgctataggatagcctttggcttcctttctctcttttgtaaataggttcaggc |
40318440 |
T |
 |
Q |
127 |
cttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||||| ||||||| |||||||||||||||||||| |
|
|
T |
40318439 |
tttaatcctggtttgaattttattttcattgctttg |
40318404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 15795995 - 15795852
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttt--tgtaaaca |
117 |
Q |
|
|
||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||| |
|
|
T |
15795995 |
ctttaggggcatgtgcagccctatgctttct-ggcaggctacactttgttttgttgctataggaaagcctttgacttcatttctctcttttgtgtaaaca |
15795897 |
T |
 |
Q |
118 |
ggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
||||| |||||||| |||||||||||||||||||||||||||| |
|
|
T |
15795896 |
aattcagaccttaatcatggtttgcattttattttcattgctttg |
15795852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 2611864 - 2611739
Alignment:
Q |
36 |
agccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggttcaggccttaatcgt |
135 |
Q |
|
|
|||| |||| |||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| | |
|
|
T |
2611864 |
agccatatgttttcttggcaggctactcttagttttgttgctttaggatagcctttggcttcctttccctcttttgtaaataggttcaggccttaatcct |
2611765 |
T |
 |
Q |
136 |
ggtttgcattttattttcattgcttt |
161 |
Q |
|
|
|||||||||| ||||||||||||||| |
|
|
T |
2611764 |
ggtttgcattctattttcattgcttt |
2611739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 40716101 - 40716197
Alignment:
Q |
68 |
ttttgttgctataggatagcctttggcttcatttctctcttttgt--aaacaggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
||||||| ||| |||||| ||||| |||| |||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
T |
40716101 |
ttttgttactacaggataacctttaccttcctttctctcttttgtgtaaataggttcatgccttaatcctggtttgcattttattttcattgctttg |
40716197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 10150704 - 10150759
Alignment:
Q |
107 |
ttttgtaaacaggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||| |
|
|
T |
10150704 |
ttttgtaaacaggttcaagccttaatcctagtttgcaatttattttcattgctttg |
10150759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 8859276 - 8859411
Alignment:
Q |
22 |
ttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggtt |
121 |
Q |
|
|
||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| || |
|
|
T |
8859276 |
ttaggggcatgtgcagccctatgctttcttggtaggctacactttgttttgtttctataggatagcctttggcttcctttctctcttttgtaaacagatt |
8859375 |
T |
 |
Q |
122 |
caggccttaatcgtggtttgcattttattttcattg |
157 |
Q |
|
|
|||||||||||| | |||||||||||||||||||| |
|
|
T |
8859376 |
caggccttaatcctaatttgcattttattttcattg |
8859411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5764475 - 5764362
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5764475 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5764376 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5764375 |
attttcattgcttt |
5764362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5768010 - 5767897
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5768010 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5767911 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5767910 |
attttcattgcttt |
5767897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5771545 - 5771432
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5771545 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5771446 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5771445 |
attttcattgcttt |
5771432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5775080 - 5774967
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5775080 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5774981 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5774980 |
attttcattgcttt |
5774967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5778615 - 5778502
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5778615 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5778516 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5778515 |
attttcattgcttt |
5778502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5782150 - 5782037
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5782150 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5782051 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5782050 |
attttcattgcttt |
5782037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5785685 - 5785572
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5785685 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5785586 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5785585 |
attttcattgcttt |
5785572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5789220 - 5789107
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5789220 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5789121 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5789120 |
attttcattgcttt |
5789107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5792755 - 5792642
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5792755 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5792656 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5792655 |
attttcattgcttt |
5792642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5796290 - 5796177
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5796290 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5796191 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5796190 |
attttcattgcttt |
5796177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5799825 - 5799712
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5799825 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5799726 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5799725 |
attttcattgcttt |
5799712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5803360 - 5803247
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5803360 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5803261 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5803260 |
attttcattgcttt |
5803247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5806895 - 5806782
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5806895 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5806796 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5806795 |
attttcattgcttt |
5806782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5810430 - 5810317
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5810430 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5810331 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5810330 |
attttcattgcttt |
5810317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5813965 - 5813852
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5813965 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5813866 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5813865 |
attttcattgcttt |
5813852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 5817500 - 5817387
Alignment:
Q |
51 |
tggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctc--ttttgtaaacaggttcaggccttaatcgtggtttgcatttt |
147 |
Q |
|
|
||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||| | |||||||||| |
|
|
T |
5817500 |
tggcaggctactctttgtttttgttgctataggatagcctttggcttcctttctctctattgtgtaaacaggttcaaaccttaatcctaatttgcatttt |
5817401 |
T |
 |
Q |
148 |
attttcattgcttt |
161 |
Q |
|
|
|||||||||||||| |
|
|
T |
5817400 |
attttcattgcttt |
5817387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 89; Significance: 8e-43; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 34466761 - 34466622
Alignment:
Q |
20 |
ctttaggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacagg |
119 |
Q |
|
|
||||||||||||||| ||| |||||||||| | ||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
34466761 |
ctttaggggcatgtgcagctctatgctttcatagcaggctacacttt---ttgttgttataggatagcctttggcttcctttctctcttttgtaaacagg |
34466665 |
T |
 |
Q |
120 |
ttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||| || |||||| |||||||||||||||||||||||||||| |
|
|
T |
34466664 |
ttcatgctttaatcctggtttgcattttattttcattgctttg |
34466622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 51499782 - 51499657
Alignment:
Q |
36 |
agccctatgctttcttggcatgctacactttgtttt-gttgctataggatagcctttggcttcatttctctcttttgt--aaacaggttcaggccttaat |
132 |
Q |
|
|
|||||| |||||| ||||| ||| | ||||||||| |||| || ||||||||||| |||||| ||||| |||||||| |||||| ||||||||||||| |
|
|
T |
51499782 |
agccctttgcttttatggcaggctcctctttgtttttgttgataaaggatagccttaggcttcctttctttcttttgtgtaaacagattcaggccttaat |
51499683 |
T |
 |
Q |
133 |
cgtggtttgcattttattttcattgc |
158 |
Q |
|
|
| |||||||||||||||||||||||| |
|
|
T |
51499682 |
cctggtttgcattttattttcattgc |
51499657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 154
Target Start/End: Complemental strand, 3847763 - 3847675
Alignment:
Q |
68 |
ttttgttgctataggatagcctttggcttcatttc--tctcttttgtaaacaggttcaggccttaatcgtggtttgcattttattttca |
154 |
Q |
|
|
||||||||||||||||||||||| | |||| |||| ||| ||||||||||||| ||||||||||||| | ||||||| |||||||||| |
|
|
T |
3847763 |
ttttgttgctataggatagccttagacttcctttccttcttttttgtaaacagggtcaggccttaatcctagtttgcaatttattttca |
3847675 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 11536388 - 11536481
Alignment:
Q |
71 |
tgttgctataggatagcctttggcttcatttctctct--tttgtaaacaggttcaggccttaatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||||||| |||| |||||| ||||| ||||| ||| | |||||||||||||||||||||||| ||||||| | |||||||| ||||||||| |
|
|
T |
11536388 |
tgttgctaaaggaaagccttatgcttcctttctttctaatgtgtaaacaggttcaggccttaatcatggtttgtaatttatttttattgctttg |
11536481 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 34483967 - 34484100
Alignment:
Q |
29 |
catgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggttcaggcct |
128 |
Q |
|
|
|||||| |||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||| |
|
|
T |
34483967 |
catgtgcagccttatgcttccttggcatgttacactttgttttgttgctataggatagccttaggcttcctttctctcttttgtaaataggttcagacct |
34484066 |
T |
 |
Q |
129 |
taatcgtggtttgcattttattttcattgctttg |
162 |
Q |
|
|
|||| |||||||||||||||||| |||| |||| |
|
|
T |
34484067 |
taattctggtttgcattttatttttattgttttg |
34484100 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 37370508 - 37370646
Alignment:
Q |
23 |
taggggcatgtggagccctatgctttcttggcatgctacactttgttttgttgctataggatagcctttggcttcatttctctcttttgtaaacaggttc |
122 |
Q |
|
|
||||| ||| || |||| ||| |||| |||||| ||||||||| ||||||||| |||||||||| |||| ||||| |||| |||||||||||| ||| || |
|
|
T |
37370508 |
tagggacatttgaagccatattctttattggcaggctacacttagttttgttgttataggatagtctttagcttcctttcactcttttgtaaataggctc |
37370607 |
T |
 |
Q |
123 |
aggccttaatcgtggtttgcattttattttcattgcttt |
161 |
Q |
|
|
||| ||||| || |||||||||||||||||||||||| |
|
|
T |
37370608 |
aggtattaatactgatttgcattttattttcattgcttt |
37370646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 38836323 - 38836390
Alignment:
Q |
67 |
gttttgttgctataggatagcctttggcttcatttctctcttt--tgtaaacaggttcaggccttaat |
132 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |
|
|
T |
38836323 |
gttttgttgctataggatagcctttggcttcctttctctcttttgtgtaaacaggttcagaccttaat |
38836390 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 39540534 - 39540617
Alignment:
Q |
69 |
tttgttgctataggatagcctttggcttcatttctctcttttgt--aaacaggttcaggccttaatcgtggtttgcattttatt |
150 |
Q |
|
|
|||||||||||||||||||||| |||||| ||| | |||||||| ||| ||||||||||||||||| ||||||||| |||||| |
|
|
T |
39540534 |
tttgttgctataggatagccttaggcttcctttatttcttttgtgtaaaaaggttcaggccttaatcctggtttgcaatttatt |
39540617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 49094426 - 49094359
Alignment:
Q |
68 |
ttttgttgctataggatagcctttggcttcatttctctcttttg--taaacaggttcaggccttaatc |
133 |
Q |
|
|
|||||||||||||||||| ||||||| ||| ||||||||||||| |||||| ||||| ||||||||| |
|
|
T |
49094426 |
ttttgttgctataggataacctttggtttcttttctctcttttgtataaacaagttcaagccttaatc |
49094359 |
T |
 |
Back To:
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Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 36863681 - 36863586
Alignment:
Q |
68 |
ttttgttgctataggatagcctttggcttcatttctctcttt--tgtaaacaggttcaggccttaatcgtggtttgcattttattttcattgcttt |
161 |
Q |
|
|
||||||||||||||||||| |||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||||||||||| ||||||||| |
|
|
T |
36863681 |
ttttgttgctataggatagtctttggcttcctttctctcttttatgcaaacatgttcaggccttaattttggtttgcattttatttccattgcttt |
36863586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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