View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104_low_29 (Length: 282)
Name: NF10104_low_29
Description: NF10104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 39662965 - 39663221
Alignment:
| Q |
8 |
atgaggaggagcagagaaccttaccaaaaccaaaccagaagaagaaaatgatgctacatatgaaggagaaattaggaaaatgaagtatagctagcaaaag |
107 |
Q |
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| T |
39662965 |
atgagaaggagcagaaaaccttaccaaaaccaaaccagaagaagaaaatgatgctacatatgaaggagaaattaggaaaatgaagtatagctagcaaaag |
39663064 |
T |
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| Q |
108 |
tttgctggggggaatgaagcctggtccgagattgaaagttagtgatgagtgagtagagagtactcttccatctccatcacctcgagccagacaacgttcc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39663065 |
tttgctggggggaatgaagcctggtccgagattgaaagttagtgatgagtgagtagagagtactcttccatctccatcacctcgagccagacaacgttcc |
39663164 |
T |
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| Q |
208 |
tctcaacctaactcttgcttctctttgatctttacaaatctaaataggtagatatat |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39663165 |
tctcaacctaactcttgcttctctttgatctttacaaatctaaataggtagatatat |
39663221 |
T |
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