View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10104_low_34 (Length: 252)
Name: NF10104_low_34
Description: NF10104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10104_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2877361 - 2877599
Alignment:
| Q |
1 |
tcaactgaatagcttaaaggggttctattattgttgttgatattctaaggtacttgaaagatgatatgtttactcacccnnnnnnnncaaaa--taatag |
98 |
Q |
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| T |
2877361 |
tcaactgaatagcttaaaggggttctattattgttgttgatattctaagatacttgaaagatgatatgtttactcacccaaaaaaataaaaaaataatag |
2877460 |
T |
|
| Q |
99 |
catgtgttaattgcgtattagtgcatgttcagtttcagccaactttaggttatctttcacatcattaccttcattagcatatcataacatgtctagaata |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2877461 |
catgtgttaattgcgtattagtgcatgttcagtttcagccaactttaggttatctttcacatcattaccttcattagcatatcataacatgtctagaata |
2877560 |
T |
|
| Q |
199 |
aagcagaggtaagtgctaataaacagtactaaaagaagt |
237 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
2877561 |
aagcagaggtaagtgctaataaacagtactaaaagaagt |
2877599 |
T |
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