View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10105_6 (Length: 376)
Name: NF10105_6
Description: NF10105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10105_6 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 30 - 358
Target Start/End: Complemental strand, 44851789 - 44851472
Alignment:
| Q |
30 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacatnnnnnnnnnnncacttgaatcaatcaagaaggggcaac |
129 |
Q |
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| T |
44851789 |
gtttgtagcatgcgatatatgaacaatacattttgttacattcttctagacaacagacacataaaaaa-----------aatcaatcaagaaggggcaac |
44851701 |
T |
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| Q |
130 |
aggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgat |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851700 |
aggaatcctttcatcagaaaaaatgctcctcgtaaagtgtaaaatagatgaagacataggtaactcctcaagctcatcgaaaaaatcaaattcttctgat |
44851601 |
T |
|
| Q |
230 |
ttagatgctgacatattctttaactgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttga |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851600 |
ttagatgctgacatattctttaactgtgcatagcagagtggctcttcctctaagagaagatctattttgtcaatatggcttttttctatatttagtttga |
44851501 |
T |
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| Q |
330 |
aaggatcttcttggtctatgatgatgtcc |
358 |
Q |
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| T |
44851500 |
aaggatcttcttggtctataatgatgtcc |
44851472 |
T |
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