View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10106_low_17 (Length: 215)
Name: NF10106_low_17
Description: NF10106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10106_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 19280513 - 19280695
Alignment:
| Q |
18 |
agggcggggctgcaggcatcattaggagataatgaattgagagtgatcgtagacggatatctttatcattacgacgagcttttccgattgaaggaggtgg |
117 |
Q |
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| T |
19280513 |
agggcggggctgcaggcatcattgggagataatgaattgagagtgatcgtagacggatatctttatcattacgacgagcttttccgattgaaggaggtgg |
19280612 |
T |
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| Q |
118 |
ctgttaaatcagatgtttttcaccttattaaaggcatttgggcttcacctgctgagagacccttcatttggataggtggtttc |
200 |
Q |
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| T |
19280613 |
ctgttaaatcagatgtttttcaccttattaaaggcatttgggcttcacctgctgagagacccttcatttggataggtggtttc |
19280695 |
T |
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