View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10106_low_9 (Length: 251)
Name: NF10106_low_9
Description: NF10106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10106_low_9 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 26608786 - 26609033
Alignment:
| Q |
1 |
ttggatatagggcattattattataattataataatcttctgttattggaatccaagttgaatctgactcattggactgtactgtataaaggcctaaacg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26608786 |
ttggatatagggcattattattataattataataatcttctgttattggaatccaagttgaatctgactcattggactgtactgtataaaggcctaaacg |
26608885 |
T |
|
| Q |
101 |
agaagg-aagcaatggtaccaaaatcttgaaaacttagaacaagaaacatgtgcaagcatgtgcattctgttcccaccacaaggtccagctaagaatcaa |
199 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26608886 |
agaagggaagcaatggtaccaaaatcttgaaaacttagaacaagaaacatgtgcaagcatgtgcattctgttcccaccacaaggtccagctaagaatcaa |
26608985 |
T |
|
| Q |
200 |
ttctaggctatactaacagcattacacactatcagctctctgcttctc |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26608986 |
ttctaggctatactaacagcattacacactatcagctccctgcttctc |
26609033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University