View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10107_low_23 (Length: 257)
Name: NF10107_low_23
Description: NF10107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10107_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 9620564 - 9620779
Alignment:
| Q |
10 |
aggagaagtagagagcatacatatattgatactaatgcctaatccacggaaaaatgtacttgtatgtaaatggcaacatggctattcatcatcatca--- |
106 |
Q |
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| T |
9620564 |
aggagaagtatagagcatacatatattgatactaatgcctaatccacggaaaagtgtacttgtatccaaacggcaatatggctattcatcatcatcacca |
9620663 |
T |
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| Q |
107 |
tcaaatagatatttatatagaaatggcatcaatcattctaatttattacttcttctacttcaagggattttggttacacataagagtaaacctatatagt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
9620664 |
tcaaatagatatttatatagaaatggcatcaatcattctaatttattacttcttctacttcaagggattttggttacacataagagtaaacc--tatagt |
9620761 |
T |
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| Q |
207 |
acgtagtcctataaacat |
224 |
Q |
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|||| ||||||||||||| |
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| T |
9620762 |
acgtggtcctataaacat |
9620779 |
T |
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