View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10107_low_43 (Length: 210)

Name: NF10107_low_43
Description: NF10107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10107_low_43
NF10107_low_43
[»] chr3 (42 HSPs)
chr3 (56-147)||(30155000-30155091)
chr3 (156-210)||(35368621-35368675)
chr3 (156-210)||(50745559-50745613)
chr3 (156-210)||(29846898-29846952)
chr3 (156-210)||(49361842-49361896)
chr3 (157-210)||(29057659-29057712)
chr3 (99-147)||(30458473-30458521)
chr3 (155-210)||(48490520-48490575)
chr3 (157-210)||(43149350-43149403)
chr3 (155-210)||(38957519-38957573)
chr3 (157-210)||(47484290-47484344)
chr3 (156-210)||(48117346-48117400)
chr3 (157-210)||(26548781-26548834)
chr3 (158-209)||(51487760-51487809)
chr3 (155-210)||(54007473-54007528)
chr3 (155-210)||(47683799-47683854)
chr3 (179-210)||(48205078-48205109)
chr3 (155-206)||(50146486-50146537)
chr3 (156-194)||(9159070-9159108)
chr3 (156-210)||(19149001-19149054)
chr3 (156-210)||(23906994-23907048)
chr3 (156-194)||(32151887-32151925)
chr3 (156-194)||(39350606-39350644)
chr3 (156-210)||(43220148-43220202)
chr3 (156-210)||(46952948-46953002)
chr3 (157-210)||(3484770-3484823)
chr3 (179-208)||(7351647-7351676)
chr3 (157-210)||(9719459-9719512)
chr3 (157-210)||(9753167-9753220)
chr3 (157-210)||(9753230-9753283)
chr3 (157-210)||(23868985-23869038)
chr3 (157-190)||(30664503-30664536)
chr3 (181-210)||(38471677-38471706)
chr3 (181-210)||(38944148-38944177)
chr3 (157-206)||(45205288-45205337)
chr3 (157-194)||(48205045-48205082)
chr3 (155-208)||(50876371-50876424)
chr3 (156-210)||(21481777-21481828)
chr3 (158-210)||(35554122-35554174)
chr3 (156-184)||(38363265-38363293)
chr3 (155-183)||(51231067-51231095)
chr3 (156-192)||(53021188-53021224)
[»] chr4 (53 HSPs)
chr4 (158-210)||(9095949-9096001)
chr4 (156-210)||(4106053-4106106)
chr4 (156-206)||(31413797-31413847)
chr4 (157-210)||(24310528-24310581)
chr4 (157-210)||(37731926-37731979)
chr4 (156-210)||(1868900-1868954)
chr4 (156-210)||(21766557-21766611)
chr4 (156-210)||(45678273-45678327)
chr4 (157-210)||(28899222-28899275)
chr4 (155-210)||(22007831-22007884)
chr4 (158-210)||(46791998-46792050)
chr4 (155-210)||(9827990-9828045)
chr4 (157-200)||(36871185-36871228)
chr4 (155-210)||(41010176-41010231)
chr4 (156-194)||(22893868-22893906)
chr4 (156-194)||(22945536-22945574)
chr4 (156-194)||(29577470-29577508)
chr4 (156-210)||(46686244-46686297)
chr4 (157-210)||(4974111-4974164)
chr4 (157-206)||(7795025-7795074)
chr4 (157-194)||(36110134-36110171)
chr4 (157-194)||(36488358-36488395)
chr4 (156-208)||(18568455-18568507)
chr4 (158-210)||(54848150-54848202)
chr4 (155-210)||(7161532-7161586)
chr4 (155-210)||(41347474-41347528)
chr4 (155-194)||(43864032-43864071)
chr4 (155-194)||(48791631-48791670)
chr4 (155-210)||(50980600-50980655)
chr4 (155-194)||(51107475-51107514)
chr4 (156-210)||(33776907-33776960)
chr4 (156-210)||(37022271-37022325)
chr4 (156-210)||(42490919-42490973)
chr4 (156-190)||(50291281-50291315)
chr4 (157-210)||(1580290-1580342)
chr4 (181-210)||(4100762-4100791)
chr4 (155-184)||(8481665-8481694)
chr4 (157-210)||(8848711-8848764)
chr4 (157-210)||(15515795-15515848)
chr4 (157-190)||(43511685-43511718)
chr4 (157-194)||(45176769-45176806)
chr4 (157-210)||(49906143-49906195)
chr4 (157-210)||(50608631-50608683)
chr4 (158-194)||(336842-336877)
chr4 (158-210)||(5386385-5386437)
chr4 (181-209)||(7037492-7037520)
chr4 (155-187)||(8485575-8485607)
chr4 (156-184)||(20760254-20760282)
chr4 (156-184)||(20766645-20766673)
chr4 (156-204)||(27384186-27384234)
chr4 (166-210)||(29891865-29891909)
chr4 (156-208)||(35500808-35500860)
chr4 (158-194)||(38960694-38960730)
[»] chr8 (28 HSPs)
chr8 (157-210)||(6243045-6243098)
chr8 (157-210)||(41776186-41776239)
chr8 (155-210)||(7010683-7010738)
chr8 (156-210)||(38939196-38939250)
chr8 (157-210)||(37471654-37471707)
chr8 (156-207)||(14233654-14233705)
chr8 (156-210)||(13924021-13924075)
chr8 (156-210)||(39884495-39884549)
chr8 (156-210)||(43590704-43590758)
chr8 (156-209)||(40413357-40413410)
chr8 (159-207)||(8233506-8233554)
chr8 (157-209)||(35345971-35346023)
chr8 (156-210)||(9963695-9963750)
chr8 (157-208)||(36675336-36675387)
chr8 (156-210)||(25430656-25430710)
chr8 (156-210)||(37392135-37392189)
chr8 (160-210)||(42768129-42768179)
chr8 (157-210)||(23265361-23265414)
chr8 (155-210)||(45405826-45405881)
chr8 (160-210)||(14710900-14710950)
chr8 (156-210)||(29107994-29108048)
chr8 (157-210)||(38174240-38174294)
chr8 (157-210)||(32777896-32777949)
chr8 (157-210)||(45081398-45081451)
chr8 (160-208)||(11138910-11138958)
chr8 (155-187)||(18549977-18550009)
chr8 (155-210)||(37294605-37294658)
chr8 (158-210)||(39211054-39211106)
[»] chr7 (33 HSPs)
chr7 (157-210)||(33465046-33465099)
chr7 (155-210)||(49142524-49142579)
chr7 (157-206)||(37848631-37848680)
chr7 (156-210)||(5905972-5906026)
chr7 (156-210)||(21589932-21589986)
chr7 (160-210)||(29923685-29923735)
chr7 (157-210)||(27866544-27866597)
chr7 (155-210)||(24380728-24380783)
chr7 (156-210)||(40108134-40108188)
chr7 (156-210)||(43942648-43942701)
chr7 (157-210)||(25272602-25272655)
chr7 (158-210)||(38547297-38547349)
chr7 (155-194)||(1709282-1709321)
chr7 (155-210)||(27570353-27570408)
chr7 (155-210)||(45420067-45420122)
chr7 (156-210)||(2323303-2323357)
chr7 (156-210)||(19510364-19510418)
chr7 (156-190)||(27704434-27704468)
chr7 (156-194)||(41538481-41538519)
chr7 (156-210)||(41985107-41985161)
chr7 (156-194)||(42552898-42552936)
chr7 (156-210)||(43213318-43213372)
chr7 (157-210)||(8742394-8742447)
chr7 (157-194)||(11325898-11325934)
chr7 (156-209)||(26749016-26749068)
chr7 (157-190)||(40207838-40207871)
chr7 (156-185)||(40231748-40231777)
chr7 (156-184)||(2849565-2849593)
chr7 (158-194)||(17039158-17039194)
chr7 (158-194)||(23034347-23034383)
chr7 (158-210)||(24044754-24044806)
chr7 (156-204)||(27473103-27473150)
chr7 (158-194)||(35212989-35213025)
[»] chr5 (23 HSPs)
chr5 (157-210)||(8442170-8442223)
chr5 (156-210)||(9957208-9957262)
chr5 (156-210)||(11878439-11878493)
chr5 (156-210)||(32732125-32732179)
chr5 (162-210)||(7080546-7080594)
chr5 (155-210)||(43153067-43153122)
chr5 (156-210)||(12203157-12203211)
chr5 (156-205)||(24486895-24486944)
chr5 (156-199)||(38919862-38919905)
chr5 (155-210)||(40201127-40201182)
chr5 (156-206)||(3849509-3849559)
chr5 (156-210)||(4434481-4434535)
chr5 (156-210)||(14206399-14206453)
chr5 (157-200)||(38387610-38387653)
chr5 (156-210)||(14923082-14923135)
chr5 (156-190)||(24330020-24330054)
chr5 (156-194)||(34693250-34693288)
chr5 (156-194)||(35474525-35474563)
chr5 (155-184)||(11881031-11881060)
chr5 (155-184)||(27005523-27005552)
chr5 (181-210)||(38010907-38010936)
chr5 (158-194)||(30103485-30103521)
chr5 (158-210)||(33910095-33910147)
[»] chr2 (45 HSPs)
chr2 (155-210)||(22296136-22296191)
chr2 (156-210)||(6885487-6885541)
chr2 (156-206)||(40115525-40115575)
chr2 (156-210)||(42607537-42607591)
chr2 (159-208)||(43076312-43076361)
chr2 (157-210)||(24727426-24727479)
chr2 (156-205)||(27329121-27329170)
chr2 (158-210)||(38777903-38777955)
chr2 (156-210)||(13453780-13453833)
chr2 (156-210)||(13881105-13881159)
chr2 (156-210)||(14021230-14021284)
chr2 (156-210)||(38724325-38724379)
chr2 (155-208)||(9647142-9647194)
chr2 (155-208)||(10550468-10550521)
chr2 (160-209)||(11828828-11828877)
chr2 (157-210)||(27538923-27538976)
chr2 (165-210)||(34215284-34215329)
chr2 (157-210)||(45202139-45202192)
chr2 (158-210)||(33583229-33583280)
chr2 (157-204)||(10216864-10216911)
chr2 (155-210)||(15141471-15141526)
chr2 (155-210)||(22353182-22353237)
chr2 (157-210)||(23141367-23141417)
chr2 (157-210)||(23553157-23553207)
chr2 (158-210)||(24491684-24491738)
chr2 (156-202)||(694279-694325)
chr2 (156-210)||(4138192-4138246)
chr2 (156-210)||(10711735-10711789)
chr2 (160-210)||(30996742-30996792)
chr2 (156-190)||(34141441-34141475)
chr2 (160-210)||(38598356-38598406)
chr2 (156-210)||(40700206-40700260)
chr2 (155-208)||(285478-285531)
chr2 (157-194)||(7664103-7664140)
chr2 (157-210)||(8757555-8757608)
chr2 (157-194)||(17917389-17917426)
chr2 (155-210)||(35008108-35008160)
chr2 (157-210)||(35792646-35792699)
chr2 (156-204)||(304996-305044)
chr2 (156-210)||(1096350-1096401)
chr2 (156-208)||(9432013-9432065)
chr2 (155-187)||(12256899-12256931)
chr2 (158-210)||(32975070-32975122)
chr2 (158-194)||(37076658-37076694)
chr2 (156-210)||(43205106-43205157)
[»] chr6 (21 HSPs)
chr6 (157-210)||(9395344-9395397)
chr6 (157-210)||(32135438-32135491)
chr6 (157-210)||(32644623-32644676)
chr6 (156-207)||(2165310-2165361)
chr6 (156-207)||(2176943-2176994)
chr6 (156-210)||(17442832-17442886)
chr6 (156-210)||(25561947-25562001)
chr6 (156-210)||(25567497-25567551)
chr6 (156-210)||(26101461-26101515)
chr6 (157-206)||(16121163-16121212)
chr6 (179-210)||(4922979-4923010)
chr6 (155-190)||(34792020-34792055)
chr6 (156-210)||(1196057-1196111)
chr6 (156-210)||(12441537-12441591)
chr6 (160-206)||(31413539-31413585)
chr6 (157-206)||(2163702-2163751)
chr6 (157-206)||(2175335-2175384)
chr6 (157-194)||(6256435-6256472)
chr6 (156-209)||(24437454-24437507)
chr6 (158-210)||(16865565-16865617)
chr6 (155-183)||(26396520-26396548)
[»] chr1 (37 HSPs)
chr1 (156-210)||(11121491-11121545)
chr1 (156-210)||(21446225-21446279)
chr1 (156-210)||(30414874-30414928)
chr1 (157-210)||(16252766-16252819)
chr1 (158-210)||(50460719-50460771)
chr1 (163-210)||(1603011-1603058)
chr1 (155-194)||(22674710-22674749)
chr1 (156-210)||(46903480-46903534)
chr1 (156-210)||(50797790-50797844)
chr1 (157-206)||(35030773-35030822)
chr1 (157-210)||(37690429-37690482)
chr1 (157-194)||(43105105-43105142)
chr1 (157-210)||(47398458-47398511)
chr1 (155-194)||(36794613-36794652)
chr1 (179-210)||(40118722-40118753)
chr1 (155-210)||(43757597-43757652)
chr1 (157-210)||(48689570-48689620)
chr1 (156-194)||(1100216-1100254)
chr1 (156-210)||(19427520-19427574)
chr1 (156-190)||(21854502-21854536)
chr1 (156-210)||(40596061-40596115)
chr1 (156-210)||(45272167-45272221)
chr1 (156-210)||(48325785-48325839)
chr1 (157-210)||(16836122-16836175)
chr1 (157-186)||(25239277-25239306)
chr1 (157-194)||(31244767-31244804)
chr1 (157-194)||(40118749-40118786)
chr1 (157-210)||(40139126-40139179)
chr1 (157-210)||(41507201-41507254)
chr1 (160-201)||(42412173-42412214)
chr1 (156-208)||(4154591-4154643)
chr1 (158-190)||(5574297-5574329)
chr1 (156-184)||(16987446-16987474)
chr1 (155-183)||(26101392-26101420)
chr1 (156-184)||(35883651-35883679)
chr1 (156-204)||(48028536-48028584)
chr1 (156-208)||(48103398-48103449)
[»] scaffold0286 (2 HSPs)
scaffold0286 (156-207)||(17048-17099)
scaffold0286 (157-206)||(18658-18707)
[»] scaffold0054 (1 HSPs)
scaffold0054 (156-210)||(31607-31661)
[»] scaffold0172 (1 HSPs)
scaffold0172 (159-200)||(9296-9337)
[»] scaffold0024 (1 HSPs)
scaffold0024 (160-194)||(48657-48691)


Alignment Details
Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 56 - 147
Target Start/End: Original strand, 30155000 - 30155091
Alignment:
Q  56 tcttctataatgctaatataactaaggttaaacaaacacaaaatctgtacaaggatcgactgctactgcaataactcgtgatttaacttcat 147  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  30155000 tcttctataatgctaatataactaaggttaatcaaacacaaactctgtacaaggatagactgctactgcaataacccgtgatttaaattcat 30155091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 35368621 - 35368675
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactcaca 35368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 50745559 - 50745613
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  50745559 agagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcaca 50745613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 29846952 - 29846898
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  29846952 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 29846898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 49361896 - 49361842
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  49361896 agagaaatgatatttgtacaatcatttttgtacaactttttctctcatactcaca 49361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 29057659 - 29057712
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 29057712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 30458521 - 30458473
Alignment:
Q  99 tctgtacaaggatcgactgctactgcaataactcgtgatttaacttcat 147  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  30458521 tctgtacaaggatcgactactactacaataactcgtgatttaacttcat 30458473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 48490575 - 48490520
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||||||||    
T  48490575 tagagaaatgatatttgtacaaccacttttgtacaactttctctctcatactcaca 48490520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 43149403 - 43149350
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||| ||||||||||| ||||||||||||| ||||| |||||||||||||    
T  43149403 gagaaatgttatttgtacaactatttttgtacaactttctttctcatactcaca 43149350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 38957573 - 38957519
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||    
T  38957573 tagagaaatgatatttgtacaactatttttg-acaactttttctctcatactcaca 38957519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 47484290 - 47484344
Alignment:
Q  157 gagaaatgatatttgtacaattatttt-tgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  47484290 gagaaatgatatttgtacaaccattttttgtacaattttttctctcatactcaca 47484344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 48117346 - 48117400
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| |||||  |||||||||||| ||||||| |||||||||||    
T  48117346 agagaaatgatatttatacaaccatttttgtacaactttctctttcatactcaca 48117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 26548834 - 26548781
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||| ||||||| |||| |||||| |||||| |||||||||||||||||||    
T  26548834 gagaaataatatttggacaactattttggtacaactttctctctcatactcaca 26548781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 51487760 - 51487809
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 209  Q
    ||||||||||||||||||  |||||||  |||||||||||||||||||||||    
T  51487760 agaaatgatatttgtaca--tattttttgacaattttctctctcatactcac 51487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 54007473 - 54007528
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgta-caattttctctctcatactcaca 210  Q
    |||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||    
T  54007473 tagagaaatgatatttctacaactatttt-gtagcaattttctctctcatactcaca 54007528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 47683799 - 47683854
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  47683799 tagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 47683854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 48205078 - 48205109
Alignment:
Q  179 atttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||||    
T  48205078 atttttgtacaattttctctctcatactcaca 48205109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 50146486 - 50146537
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||| ||| |||||   ||||||||||||||||||||    
T  50146486 tagagaaatgatatttgtataatcattttgtgacaattttctctctcatact 50146537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 9159108 - 9159070
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  9159108 agagaaatgatatttgtacaaccatttttgtacaatttt 9159070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 19149001 - 19149054
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| ||||| |||||| || || |||||||||||||||||||    
T  19149001 agagaaatgatatttgaacaatcattttt-tataactttctctctcatactcaca 19149054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 23907048 - 23906994
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||| |  ||||| |||||||||||||||||||    
T  23907048 agagaaatgatatttgtacaaccattatgttacaactttctctctcatactcaca 23906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 32151887 - 32151925
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  32151887 agagaaatgatatgtgtacaattatttttgtataatttt 32151925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 39350644 - 39350606
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  39350644 agagaaatgatatttgtacaattattttttaacaatttt 39350606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 43220202 - 43220148
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||| |||||||| |||||  ||||||||| || |||||||||||||||||||    
T  43220202 agagaattgatatttttacaaccatttttgtaaaactttctctctcatactcaca 43220148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 46952948 - 46953002
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||  | || |||||||||||||||||||    
T  46952948 agagaaatgatatttgtacaaccattttttgataactttctctctcatactcaca 46953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 3484770 - 3484823
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| |||  |||||  ||||| |||||||||||||||||||    
T  3484770 gagaaatgatatttgtccaaccattttattacaactttctctctcatactcaca 3484823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 7351676 - 7351647
Alignment:
Q  179 atttttgtacaattttctctctcatactca 208  Q
    ||||||||||||||||||||||||||||||    
T  7351676 atttttgtacaattttctctctcatactca 7351647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 9719512 - 9719459
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  | ||||  ||||||||| ||||||||||||||    
T  9719512 gagaaatgatatttgtacaaccactttttgacaattttccctctcatactcaca 9719459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 9753167 - 9753220
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||||| |||  |||| ||||||| ||||| |||||    
T  9753167 gagaaatgatatttgtacaattatattttgacaactttctctttcatattcaca 9753220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 9753230 - 9753283
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| ||||| |||||   |||||||| |||||||||||||||    
T  9753230 gagaaatgatatttgaacaatcattttgtgacaattttatctctcatactcaca 9753283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 23869038 - 23868985
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||   |||||||||||| |||||||||||    
T  23869038 gagaaatgatatttgtacaaccattttataacaattttctctttcatactcaca 23868985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 30664503 - 30664536
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaa 190  Q
    ||||||||||||||||||||| ||||||||||||    
T  30664503 gagaaatgatatttgtacaatcatttttgtacaa 30664536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 38471677 - 38471706
Alignment:
Q  181 ttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||    
T  38471677 ttttgtacaattttctctctcatactcaca 38471706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 38944177 - 38944148
Alignment:
Q  181 ttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||    
T  38944177 ttttgtacaattttctctctcatactcaca 38944148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 45205288 - 45205337
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    |||||||||||||||||||| ||||||   |||||||| |||||||||||    
T  45205288 gagaaatgatatttgtacaactattttgtgacaattttttctctcatact 45205337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 48205045 - 48205082
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  48205045 gagaaatgatatttgtacaatcatttttgtataatttt 48205082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 50876424 - 50876371
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||||||||||||  ||||||  |||| ||||||| |||||||||    
T  50876424 tagagaaatgatatttgtacaacaattttttgacaactttctctatcatactca 50876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 21481777 - 21481828
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| |   ||||||||| ||| |||||||||||||||    
T  21481777 agagaaatgatatttgtacaact---tttgtacaactttttctctcatactcaca 21481828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 35554174 - 35554122
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| ||| | ||||  |||| |||||||||||||||||||    
T  35554174 agaaatgatatttgtataatcactttttgacaactttctctctcatactcaca 35554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 38363293 - 38363265
Alignment:
Q  156 agagaaatgatatttgtacaattattttt 184  Q
    |||||||||||||||||||||||||||||    
T  38363293 agagaaatgatatttgtacaattattttt 38363265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Complemental strand, 51231095 - 51231067
Alignment:
Q  155 tagagaaatgatatttgtacaattatttt 183  Q
    |||||||||||||||||||||||||||||    
T  51231095 tagagaaatgatatttgtacaattatttt 51231067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 53021188 - 53021224
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatt 192  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  53021188 agagaaatgatatttgtacaactatttttgtgcaatt 53021224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 9095949 - 9096001
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9095949 agaaatgttatttgtacaattatttttgtacaattttctctctcatactcaca 9096001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 4106053 - 4106106
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  4106053 agagaaatgatatttgtacaatttttttt-tacaattttctctctcatactcaca 4106106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 31413847 - 31413797
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  31413847 agagaaatgatatttgtacaactatttttgtacaactttctctctcatact 31413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 24310581 - 24310528
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  24310581 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 24310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 37731926 - 37731979
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactcaca 37731979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 1868954 - 1868900
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  1868954 agagaaatgatatttgtacaaccatttttgtacaactttctatctcatactcaca 1868900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 21766557 - 21766611
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  21766557 agagaaatgatatttgtataatcatttttgtacaaccttctctctcatactcaca 21766611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 45678273 - 45678327
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||    
T  45678273 agagaaatgttatttgtacaatcatttttgtacaattttatctctcatacccaca 45678327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 28899275 - 28899222
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||    
T  28899275 gagaaatgatatttgtacaatcattttggtacaactttctctctcatattcaca 28899222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 22007831 - 22007884
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||||||||||||    
T  22007831 tagagaaatgatatttgtacaattatttttggacaa--ctctctctcatactcaca 22007884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 46792050 - 46791998
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| |||  |||||||||||||||||| |||||||||||||    
T  46792050 agaaatgatatttgtgcaacaatttttgtacaattttctttctcatactcaca 46791998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 9828045 - 9827990
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  ||||| |||||| ||||||||||| |||||||    
T  9828045 tagagaaatgatatttgtacaaccattttagtacaactttctctctcacactcaca 9827990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 36871228 - 36871185
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctct 200  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  36871228 gagaaatgatatttgtacaactatttttgtacaactttctctct 36871185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 41010231 - 41010176
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| |||||| |||||||||||||| | ||||| |||||||||    
T  41010231 tagagaaatgatatttatacaatcatttttgtacaattctttctcttatactcaca 41010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 22893868 - 22893906
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22893868 agagaaatgatatttgtacaatcatttttgtacaatttt 22893906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 22945536 - 22945574
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22945536 agagaaatgatatttgtacaatcatttttgtacaatttt 22945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 29577508 - 29577470
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  29577508 agagaaatgatatttgtacaactatttttgtacaatttt 29577470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 46686244 - 46686297
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||| |||||| |||||||||||||||||||    
T  46686244 agagaaatgatatttgtacaaccatttt-gtacaactttctctctcatactcaca 46686297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 4974111 - 4974164
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||||| ||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatacccaca 4974164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 7795025 - 7795074
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||||||    
T  7795025 gagaaatgatatttgtacaaccatttttgtacaactttctttctcatact 7795074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 36110134 - 36110171
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36110134 gagaaatgatatttgtacaactatttttgtacaatttt 36110171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 36488358 - 36488395
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36488358 gagaaatgatatttgaacaattatttttgtacaatttt 36488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 18568507 - 18568455
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    |||||||||||||||||| |||||||||   |||||||||||||| |||||||    
T  18568507 agagaaatgatatttgtagaattattttgtgacaattttctctcttatactca 18568455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 54848150 - 54848202
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||  ||||||||||||  |||||||||||| |||||    
T  54848150 agaaatgatatttgtacaaccatttttgtacaaccttctctctcatattcaca 54848202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 7161586 - 7161532
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||| |||||||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  7161586 tagaaaaatgatatttgtacaat-atttttttacaactttctctctcatattcaca 7161532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 41347528 - 41347474
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||| ||||||||||||| ||||||| |||| |||||||||||| ||||||    
T  41347528 tagagaaattatatttgtacaatcatttttg-acaactttctctctcatgctcaca 41347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 43864032 - 43864071
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  43864032 tagagaaatgatatttgtacaactattttggtacaatttt 43864071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 48791670 - 48791631
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  48791670 tagagaaatgatatttgtacaactatttttgtataatttt 48791631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 50980600 - 50980655
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||| |||||   ||||  ||||||||||||||||||    
T  50980600 tagagaaatgatatttgtacaatcattttctaacaaccttctctctcatactcaca 50980655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 51107514 - 51107475
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  51107514 tagagaaatgatatttgtacaatcatttttgtataatttt 51107475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 33776907 - 33776960
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||| ||||| |||||    
T  33776907 agagaaatgatatttgtacaa-tatttttgtacaactttatctttcatattcaca 33776960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 37022271 - 37022325
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||  ||||| ||| |||||||||||||||    
T  37022271 agagaaatgatatttgtacaaccattttgatacaactttatctctcatactcaca 37022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 42490919 - 42490973
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  | ||||  |||| |||||||||||||||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcaca 42490973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 50291281 - 50291315
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaa 190  Q
    |||||||||||||||||||||| ||||||||||||    
T  50291281 agagaaatgatatttgtacaatcatttttgtacaa 50291315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 1580342 - 1580290
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||   ||| || ||||||||||||||||||||||||    
T  1580342 gagaaatgatatttgtacaacactttgtg-acaattttctctctcatactcaca 1580290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 4100791 - 4100762
Alignment:
Q  181 ttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||    
T  4100791 ttttgtacaattttctctctcatactcaca 4100762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 184
Target Start/End: Complemental strand, 8481694 - 8481665
Alignment:
Q  155 tagagaaatgatatttgtacaattattttt 184  Q
    ||||||||||||||||||||||||||||||    
T  8481694 tagagaaatgatatttgtacaattattttt 8481665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 8848711 - 8848764
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  | |||| ||||||||||||||| | |||||||    
T  8848711 gagaaatgatatttgtacaacaaattttatacaattttctctcttacactcaca 8848764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 15515795 - 15515848
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||| |||||| ||||||   |||| |||||||||||||||||||    
T  15515795 gagaaatgatattggtacaactattttatgacaactttctctctcatactcaca 15515848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 43511718 - 43511685
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaa 190  Q
    |||||||||||||||||||| |||||||||||||    
T  43511718 gagaaatgatatttgtacaactatttttgtacaa 43511685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 45176806 - 45176769
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||||||||  |||||||||    
T  45176806 gagaaatgatatttgtacaattattttgttacaatttt 45176769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 49906143 - 49906195
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||| || ||||||||||||| ||||||||||    
T  49906143 gagaaatgatatttgtacaaccatttgtg-acaattttctctcacatactcaca 49906195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 50608683 - 50608631
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||| |||||||||||    
T  50608683 gagaaattatatttgaacaattatttttg-acaactttctctttcatactcaca 50608631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 336877 - 336842
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||||||||| ||||||||    
T  336877 agaaatgatatttgtacaattatttttg-acaatttt 336842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 5386385 - 5386437
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||| ||||  ||||||  |||| |||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcaca 5386437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 7037520 - 7037492
Alignment:
Q  181 ttttgtacaattttctctctcatactcac 209  Q
    |||||||||||||||||||||||||||||    
T  7037520 ttttgtacaattttctctctcatactcac 7037492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 8485575 - 8485607
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgta 187  Q
    |||||||||||||||||||||| ||||||||||    
T  8485575 tagagaaatgatatttgtacaactatttttgta 8485607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 20760254 - 20760282
Alignment:
Q  156 agagaaatgatatttgtacaattattttt 184  Q
    |||||||||||||||||||||||||||||    
T  20760254 agagaaatgatatttgtacaattattttt 20760282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 20766645 - 20766673
Alignment:
Q  156 agagaaatgatatttgtacaattattttt 184  Q
    |||||||||||||||||||||||||||||    
T  20766645 agagaaatgatatttgtacaattattttt 20766673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 27384186 - 27384234
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 204  Q
    |||||||||||||||||||||  |||||  ||||| |||||||||||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcata 27384234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 29891865 - 29891909
Alignment:
Q  166 tatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||| ||||||||||  |||| |||||||||||||||||||    
T  29891865 tatttgtataattattttttgacaactttctctctcatactcaca 29891909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 35500860 - 35500808
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||| || ||| ||||||||  |||| |||||||||||||||||    
T  35500860 agagaaatgatatatgaacatttattttttgacaactttctctctcatactca 35500808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 38960730 - 38960694
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||  ||||||||||||||||    
T  38960730 agaaatgatatttgtacaaccatttttgtacaatttt 38960694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 6243045 - 6243098
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcaca 6243098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 41776186 - 41776239
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactcaca 41776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 7010683 - 7010738
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  7010683 tagagaaatgatatttgtacaatcattttttgacaattttctctctcatactcaca 7010738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 38939250 - 38939196
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  38939250 agagaaatgatatttctacaactatttttgtacaactttctctctcatactcaca 38939196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 37471654 - 37471707
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctcgtactcaca 37471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 14233705 - 14233654
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 207  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  14233705 agagaaatgatatttgtacaactatttttttacaactttctctctcatactc 14233654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 13924021 - 13924075
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||| ||||||    
T  13924021 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcaca 13924075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 39884549 - 39884495
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||  |||||| || |||||||||||||||    
T  39884549 agagaaatgatatttgtacaattattttattacaatattatctctcatactcaca 39884495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 43590704 - 43590758
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||| ||| ||||||||| || |||||||||||||||||||    
T  43590704 agagaaatgatatttgtataatcatttttgtataactttctctctcatactcaca 43590758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 40413410 - 40413357
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 209  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaactttctctctcatactcac 40413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 8233554 - 8233506
Alignment:
Q  159 gaaatgatatttgtacaattatttttgtacaattttctctctcatactc 207  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  8233554 gaaatgatatttgtacaatcatttttgtacatctttctctctcatactc 8233506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 35346023 - 35345971
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 209  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||| |||||    
T  35346023 gagaaatgatatttgtccaattatttttgtacaattttcttcctcatcctcac 35345971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 9963695 - 9963750
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctc-tcatactcaca 210  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||    
T  9963695 agagaaatgatatttgtacaataattttttgacaattttctctcatcatactcaca 9963750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 36675336 - 36675387
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||||||    
T  36675336 gagaaatgatatttgtacaaccatttttgtacaactttttctctcatactca 36675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 25430656 - 25430710
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||||||||  |||| |||||||||||||    
T  25430656 agagaaatgatatttgtacaaccatttttgtacaaccttctatctcatactcaca 25430710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 37392189 - 37392135
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||  |||| |||||||||||||||||||    
T  37392189 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 37392135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 42768179 - 42768129
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||| || ||||  ||||||||||||||||||||||||    
T  42768179 aaatgatatttgtacaactactttttgacaattttctctctcatactcaca 42768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 23265414 - 23265361
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||| || ||||||| ||||| ||| |||||||||||||||    
T  23265414 gagaaatgatatttgtataactatttttatacaactttttctctcatactcaca 23265361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 45405881 - 45405826
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  |||||  ||||| ||| |||||||||||||||    
T  45405881 tagagaaatgatatttgtacaaccattttgatacaactttttctctcatactcaca 45405826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 14710950 - 14710900
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||| |||||   |||| |||||||||||||||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaactttctctctcatactcaca 14710900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 29107994 - 29108048
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| ||||||  |||| ||||||| | |||||||||    
T  29107994 agagaaatgatatttgtacaatcattttttaacaactttctcttttatactcaca 29108048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 38174294 - 38174240
Alignment:
Q  157 gagaaatgatatttgtacaattat-ttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| ||| ||||  |||| |||||||||||||||||||    
T  38174294 gagaaatgatatttgtacaactatcttttagacaactttctctctcatactcaca 38174240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 32777896 - 32777949
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||| |||||||  |||||| ||||| ||||||||| |||||||||    
T  32777896 gagaaatgatatctgtacaaccatttttatacaactttctctcttatactcaca 32777949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 45081398 - 45081451
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  | ||||  |||||||| |||||||||||||||    
T  45081398 gagaaatgatatttgtacaaccaatttttaacaattttgtctctcatactcaca 45081451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 11138910 - 11138958
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||||||| ||||||   |||| |||||||||||||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactttctctctcatactca 11138958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 18549977 - 18550009
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgta 187  Q
    ||||||||||||||||||||||| |||||||||    
T  18549977 tagagaaatgatatttgtacaatcatttttgta 18550009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 37294605 - 37294658
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||| ||  | ||||||||||  ||||||||||||||||||    
T  37294605 tagagaaatgatatttgtaaaa--acttttgtacaaccttctctctcatactcaca 37294658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 39211054 - 39211106
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||| ||||  ||||||  |||| |||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcaca 39211106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 33465099 - 33465046
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgtacaattttctctctcatactcaca 33465046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 49142579 - 49142524
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  49142579 tagagaaatgatatttgtacaaccatttttgtaaaattttctctctcatactcaca 49142524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 37848680 - 37848631
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  37848680 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatact 37848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 5906026 - 5905972
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| ||||| ||| || |||||||||||||||||||    
T  5906026 agagaaatgatatttgtacaatcattttggtataactttctctctcatactcaca 5905972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 21589932 - 21589986
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||    
T  21589932 agagaaatgatatctgtacaattatttttgtacaactttttctttcatactcaca 21589986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 29923685 - 29923735
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  29923685 aaatgacatttgtacaatcatttttgtacaactttctctctcatactcaca 29923735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 27866597 - 27866544
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||||||||    
T  27866597 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcaca 27866544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 24380783 - 24380728
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  |||||| ||||| ||||| |||||||||||||    
T  24380783 tagagaaatgatatttgtacaaccatttttatacaactttctttctcatactcaca 24380728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 40108134 - 40108188
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||| |||||||||  |||||| ||||| |||||||||||||||||||    
T  40108134 agagaaatgatgtttgtacaaccatttttatacaactttctctctcatactcaca 40108188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 43942648 - 43942701
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||    
T  43942648 agagaaatgatatttgaacaactattttt-tacaactttctctctcatactcaca 43942701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 25272602 - 25272655
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||||||||| ||||||||  |||||||||    
T  25272602 gagaaatgatatttgtacaaccatttttgtacaactttctctcatatactcaca 25272655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 38547349 - 38547297
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||| |||||||  |||| ||||| |||||||||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttctttctcatactcaca 38547297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 1709282 - 1709321
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  1709282 tagagaaatgatatctgtacaatcatttttgtacaatttt 1709321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 27570353 - 27570408
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||| |||| |||||||  | || |||||||||||||||||||    
T  27570353 tagagaaatgatatttgaacaactattttttaataactttctctctcatactcaca 27570408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 45420122 - 45420067
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||| |||| |||||||  |||| ||||||||||||| |||||    
T  45420122 tagagaaatgatatttgaacaactattttttgacaactttctctctcatattcaca 45420067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 2323303 - 2323357
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  2323303 agagaaatgatatttgtacaacaattttatgacaactttctctctcatactcaca 2323357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 19510418 - 19510364
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||   |||| ||||||||| | |||||||    
T  19510418 agagaaatgatatttgtacaattattttctcacaactttctctcttaaactcaca 19510364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 27704434 - 27704468
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaa 190  Q
    ||||||||||||||||||||| |||||||||||||    
T  27704434 agagaaatgatatttgtacaactatttttgtacaa 27704468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 41538481 - 41538519
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  41538481 agagaaatgatatttgtacaaccatttttgtacaatttt 41538519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 41985161 - 41985107
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| | |||   |||| |||||||||||||||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaactttctctctcatactcaca 41985107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 42552898 - 42552936
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  42552898 agagaaatgatatttgtacaatcatttttatacaatttt 42552936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 43213318 - 43213372
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  | |||   ||||||||||||||||||||||||    
T  43213318 agagaaatgatatttgtacaaccactttctaacaattttctctctcatactcaca 43213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 8742394 - 8742447
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| ||| |||  |||| ||| |||||||||||||||    
T  8742394 gagaaatgatatttgtacaactatgttttgacaactttttctctcatactcaca 8742447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 11325898 - 11325934
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  11325898 gagaaatgatatttgtacaattatttttg-acaatttt 11325934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 26749016 - 26749068
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 209  Q
    |||||||||||||||| ||||  ||||||| |||| ||||||||||||||||||    
T  26749016 agagaaatgatatttgaacaacaatttttg-acaactttctctctcatactcac 26749068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 40207871 - 40207838
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaa 190  Q
    |||||||||||||||||||| |||||||||||||    
T  40207871 gagaaatgatatttgtacaactatttttgtacaa 40207838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 40231777 - 40231748
Alignment:
Q  156 agagaaatgatatttgtacaattatttttg 185  Q
    ||||||||||||||||||||||||||||||    
T  40231777 agagaaatgatatttgtacaattatttttg 40231748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 2849593 - 2849565
Alignment:
Q  156 agagaaatgatatttgtacaattattttt 184  Q
    |||||||||||||||||||||||||||||    
T  2849593 agagaaatgatatttgtacaattattttt 2849565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 17039158 - 17039194
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  17039158 agaaatgatatttgtacaactatttttgtataatttt 17039194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 23034383 - 23034347
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||  ||||||||||||||||    
T  23034383 agaaatgatatttgtacaaccatttttgtacaatttt 23034347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 24044806 - 24044754
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||   |||| | ||||| |||||||||||    
T  24044806 agaaatgatatttgtacaattattttgtgacaactctctctttcatactcaca 24044754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 27473103 - 27473150
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 204  Q
    ||||||||||||||| |||||||||||||| |||| ||| |||||||||    
T  27473103 agagaaatgatatttatacaattatttttg-acaactttttctctcata 27473150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 35213025 - 35212989
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||||||  |||||||||    
T  35213025 agaaatgatatttgtacaattattttgctacaatttt 35212989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 8442170 - 8442223
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  8442170 gagaaatgatatttgtacaattatttttgtacaactttctctctcatattcaca 8442223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 9957262 - 9957208
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  9957262 agagaaatgatatttgtacaattatttttgtagaactttctttctcatactcaca 9957208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 11878439 - 11878493
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||    
T  11878439 agagaaatgatatttgtacaattatttttatataattttctatctcatactcaca 11878493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 32732179 - 32732125
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  32732179 agagaaattatatttgtacaatcatttttgtacaactttctctctcatactcaca 32732125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 7080546 - 7080594
Alignment:
Q  162 atgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||    
T  7080546 atgatatttgtacaatcatttttgtacaactttctctctcatactcaca 7080594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 43153122 - 43153067
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||    
T  43153122 tagagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcaca 43153067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 12203157 - 12203211
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||| ||||||    
T  12203157 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcaca 12203211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 24486895 - 24486944
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatac 205  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  24486895 agagaaatgatatttgaacaataatttttgtacaattttctttctcatac 24486944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 38919862 - 38919905
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctc 199  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  38919862 agagaaatgatatttgtacaactatttttgtacaactttctctc 38919905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 40201182 - 40201127
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| |||||  ||||||||||||| |||||||||||| |||||    
T  40201182 tagagaaatgatatttatacaaccatttttgtacaatattctctctcatagtcaca 40201127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 3849509 - 3849559
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||| |||||||||||||||||| || ||| |||||||    
T  3849509 agagaaatgatatttgttcaattatttttgtacaatcttttctttcatact 3849559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 4434481 - 4434535
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||  |||||||| |||||||||||||||    
T  4434481 agagaaatgatatttgtacaaccattttttgacaattttttctctcatactcaca 4434535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 14206399 - 14206453
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||  |||| |||||||||||||||||||    
T  14206399 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 14206453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 38387610 - 38387653
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctct 200  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  38387610 gagaaatgatatttgtacaaccatttttgtacaactttctctct 38387653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 14923082 - 14923135
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||    
T  14923082 agagaaatgatatttgaacaaccattttt-tacaactttctctctcatactcaca 14923135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 24330054 - 24330020
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaa 190  Q
    |||||||||||||||||||||||||||| ||||||    
T  24330054 agagaaatgatatttgtacaattattttggtacaa 24330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 34693288 - 34693250
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  34693288 agagaaatgatatttgtacaatcatttttgtataatttt 34693250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 35474563 - 35474525
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  35474563 agaggaatgatatttgtacaattaattttgtacaatttt 35474525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 184
Target Start/End: Complemental strand, 11881060 - 11881031
Alignment:
Q  155 tagagaaatgatatttgtacaattattttt 184  Q
    ||||||||||||||||||||||||||||||    
T  11881060 tagagaaatgatatttgtacaattattttt 11881031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 184
Target Start/End: Complemental strand, 27005552 - 27005523
Alignment:
Q  155 tagagaaatgatatttgtacaattattttt 184  Q
    ||||||||||||||||||||||||||||||    
T  27005552 tagagaaatgatatttgtacaattattttt 27005523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 38010907 - 38010936
Alignment:
Q  181 ttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||    
T  38010907 ttttgtacaattttctctctcatactcaca 38010936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 30103521 - 30103485
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  30103521 agaaatgatatttgtacaatcatttttgtataatttt 30103485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 33910147 - 33910095
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| |||  ||||||  |||| |||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactcaca 33910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 22296191 - 22296136
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  22296191 tagagaaatgatatttgtacaaccatttttgtacaattttctctctgatactcaca 22296136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 6885541 - 6885487
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  6885541 agagaaatgatttttgtacaactatttttatacaattttctctctcatactcaca 6885487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 40115525 - 40115575
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  40115525 agagaaatgatatttgtacaactatttttgtataattttctctctcatact 40115575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 42607591 - 42607537
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  42607591 agagaaatgatatttgtacaattattttgtgacaattttctctctcatactcaca 42607537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 43076312 - 43076361
Alignment:
Q  159 gaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  43076312 gaaatgatatttgtataatcatttttgtacaattttctctctcatactca 43076361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 24727426 - 24727479
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatactcaca 24727479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 27329170 - 27329121
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatac 205  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  27329170 agagaaatgatatttgtacaatcattttggtacaactttctctctcatac 27329121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 38777903 - 38777955
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||| |||||    
T  38777903 agaaaggatatttgtacaatcatttttatacaattttctctctcatattcaca 38777955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 13453780 - 13453833
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  13453780 agagaaatgatatttgtacaattttttttg-acaactttttctctcatactcaca 13453833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 13881105 - 13881159
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||    
T  13881105 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcaca 13881159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 14021230 - 14021284
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||| |||||||||| |||||||||||| ||| ||| |||||||||||    
T  14021230 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcaca 14021284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 38724379 - 38724325
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||| ||| |||||||||||||| |||||||    
T  38724379 agagaaatgatatttgtacaaccattttagtataattttctctctcacactcaca 38724325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 9647142 - 9647194
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  9647142 tagagaaatgatatttgaacaactattttt-tacaactttctctctcatactca 9647194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 10550521 - 10550468
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    |||||||||||||| ||||||| |||||||  |||| |||||||||||||||||    
T  10550521 tagagaaatgatatatgtacaactattttttcacaactttctctctcatactca 10550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 11828877 - 11828828
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatactcac 209  Q
    |||||||||||||||||  |||||||||||| ||||||||||||| ||||    
T  11828877 aaatgatatttgtacaaccatttttgtacaactttctctctcatattcac 11828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 27538976 - 27538923
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||||||||| ||||||| | |||||||||    
T  27538976 gagaaatgatatttgtacaaccatttttgtacaactttctctatgatactcaca 27538923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 34215284 - 34215329
Alignment:
Q  165 atatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||    
T  34215284 atatttgtacaattattttttgacaattttctctctcatattcaca 34215329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 45202192 - 45202139
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||| ||||| ||||||||||||| |||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctcatattcaca 45202139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 33583280 - 33583229
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| ||| ||||||| |||||||||||| |||||||||||    
T  33583280 agaaatgatatttgtataatcatttttg-acaattttctctttcatactcaca 33583229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 10216864 - 10216911
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcata 204  Q
    ||||||||||||||||||||| | ||||  ||||||||||||||||||    
T  10216864 gagaaatgatatttgtacaatcactttttgacaattttctctctcata 10216911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 15141471 - 15141526
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||   |||| |||||||||||||||||||    
T  15141471 tagagaaatgatatttgtacatctattttatgacaactttctctctcatactcaca 15141526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 22353237 - 22353182
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||| |||||   |||| ||||| |||||||||||||    
T  22353237 tagagaaatgatatttgtacaatcattttgtgacaactttctttctcatactcaca 22353182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 23141367 - 23141417
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||   ||||||||| | |||||||||||||||||    
T  23141367 gagaaatgatatttgtacaatt---tttgtacaactgtctctctcatactcaca 23141417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 23553157 - 23553207
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||   ||||||||| | |||||||||||||||||    
T  23553157 gagaaatgatatttgtacaatt---tttgtacaactgtctctctcatactcaca 23553207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 24491738 - 24491684
Alignment:
Q  158 agaaatgatatttgtacaatta--tttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||  |  |||||||||||||||||||||| ||||||||    
T  24491738 agaaatgatatttgtacaaccaattttttgtacaattttctctctcgtactcaca 24491684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 694279 - 694325
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctca 202  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||    
T  694279 agagaaatgatatttgtacaaccattttttgacaattttctctctca 694325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 4138246 - 4138192
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||| || ||||||   |||| |||||||||||||||||||    
T  4138246 agagaaatgatatttgtataactattttctaacaactttctctctcatactcaca 4138192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 10711735 - 10711789
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| |||  ||||||   ||||||||||||||||||||||||    
T  10711735 agagaaatgatatttgaacatctattttgtgacaattttctctctcatactcaca 10711789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 30996742 - 30996792
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||| ||| ||||  |||| |||||||||||||||||||    
T  30996742 aaatgatatttgtacatttactttttgacaactttctctctcatactcaca 30996792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 34141441 - 34141475
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaa 190  Q
    |||||||||||||||||||||| ||||||||||||    
T  34141441 agagaaatgatatttgtacaatcatttttgtacaa 34141475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 38598406 - 38598356
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||| ||  ||||||||||||  ||||||||||||||||||    
T  38598406 aaatgatatttgtataaccatttttgtacaaccttctctctcatactcaca 38598356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 40700206 - 40700260
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||| ||||||||||| ||||||   |||| |||||||||||||||||||    
T  40700206 agagaaatggtatttgtacaactattttataacaactttctctctcatactcaca 40700260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 285531 - 285478
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||||||||||| | ||||| | |||| |||||||| ||||||||    
T  285531 tagagaaatgatatttgtacattcattttggaacaactttctctcgcatactca 285478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 7664140 - 7664103
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  7664140 gagaaatgatatttgaacaattatttttggacaatttt 7664103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 8757555 - 8757608
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||| |||||||||||  |||||| ||||| ||| |||||||||||||||    
T  8757555 gagaaatgttatttgtacaaccatttttatacaactttatctctcatactcaca 8757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 17917389 - 17917426
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  17917389 gagaaatgatatttgtacaattattttttaacaatttt 17917426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 35008160 - 35008108
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| |   ||||||||||||| | |||||||||||||    
T  35008160 tagagaaatgatatttgtacaact---tttgtacaattttatttctcatactcaca 35008108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 35792699 - 35792646
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||  ||||||||| | |||||||||||||    
T  35792699 gagaaatgatatttgtacaaccattttgttacaattttttttctcatactcaca 35792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 305044 - 304996
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 204  Q
    |||||||| ||||||||||||  ||||| |||||| |||||||||||||    
T  305044 agagaaattatatttgtacaaccattttggtacaactttctctctcata 304996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 1096401 - 1096350
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| |   |||||| |||||| |||||||||||||||    
T  1096401 agagaaatgatatttgtacaact---tttgtataattttatctctcatactcaca 1096350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 9432013 - 9432065
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    |||||||||| ||||||||||  |||||  ||||||||||||| |||||||||    
T  9432013 agagaaatgaaatttgtacaaccattttgatacaattttctctttcatactca 9432065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 12256899 - 12256931
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgta 187  Q
    ||||||||||||||||||||||| |||||||||    
T  12256899 tagagaaatgatatttgtacaatcatttttgta 12256931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 32975070 - 32975122
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||  |||||||||||   |||||||| |||||||||||||||    
T  32975070 agaaatgatattttgacaattattttgtgacaattttatctctcatactcaca 32975122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 37076658 - 37076694
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||||||| || ||||||    
T  37076658 agaaatgatatttgtacaattatttttatataatttt 37076694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 43205106 - 43205157
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| |   |||||||||  ||||||||||||||||||    
T  43205106 agagaaatgatatttgtacaact---tttgtacaacattctctctcatactcaca 43205157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 9395397 - 9395344
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  9395397 gagaaatgatatttgtacaactatttttgtacaactttctctttcatactcaca 9395344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 32135491 - 32135438
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttgtacaactttctctatcatactcaca 32135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 32644623 - 32644676
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatactcaca 32644676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 2165361 - 2165310
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 207  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  2165361 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2165310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 2176994 - 2176943
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 207  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  2176994 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 17442832 - 17442886
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||| |||||||||    
T  17442832 agagaaataatatttgtacaaccatttttgtacaactttctctcttatactcaca 17442886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 25562001 - 25561947
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||| ||||||| |||||| ||||| ||| |||||||||||||||    
T  25562001 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcaca 25561947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 25567551 - 25567497
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||| ||||||  |||||||||||| ||| |||||||||||||||    
T  25567551 agagaaatgatattcgtacaaccatttttgtacaactttatctctcatactcaca 25567497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 26101515 - 26101461
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||| ||||||| |||||| ||||| ||| |||||||||||||||    
T  26101515 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcaca 26101461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 16121163 - 16121212
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||    
T  16121163 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatact 16121212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 4922979 - 4923010
Alignment:
Q  179 atttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||||    
T  4922979 atttttgtacaattttctctctcatactcaca 4923010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 34792020 - 34792055
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaa 190  Q
    ||||||||||||||||||||||| ||||||||||||    
T  34792020 tagagaaatgatatttgtacaatcatttttgtacaa 34792055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 1196057 - 1196111
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| | ||||  |||| ||||||||| |||||||||    
T  1196057 agagaaatgatatttgtacaatcactttttgacaactttctctctaatactcaca 1196111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 12441537 - 12441591
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| || |||   |||| |||||||||||||||||||    
T  12441537 agagaaatgatatttgtacaactactttgtgacaactttctctctcatactcaca 12441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 31413539 - 31413585
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||    
T  31413539 aaatgatatttgtacaattattttgtgacaattttctctctaatact 31413585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 2163702 - 2163751
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||    
T  2163702 gagaaatgatatttgtacaatcaatttgtgacaattttctctctcatact 2163751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 2175335 - 2175384
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||    
T  2175335 gagaaatgatatttgtacaatcaatttgtgacaattttctctctcatact 2175384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 6256435 - 6256472
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  6256435 gagaaatgatatttgtacaattattttttgacaatttt 6256472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 24437454 - 24437507
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcac 209  Q
    |||||||| |||||||| ||||||||||   | |||||||||||||||||||||    
T  24437454 agagaaattatatttgtgcaattattttgtgataattttctctctcatactcac 24437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 16865565 - 16865617
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| | |||||||||| ||||| ||| || ||||||    
T  16865565 agaaatgatatttgtacaatcacttttgtacaactttctatcttatgctcaca 16865617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Complemental strand, 26396548 - 26396520
Alignment:
Q  155 tagagaaatgatatttgtacaattatttt 183  Q
    |||||||||||||||||||||||||||||    
T  26396548 tagagaaatgatatttgtacaattatttt 26396520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 11121491 - 11121545
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  | |||||||||| |||||||||||||||||||    
T  11121491 agagaaatgatatttgtacaacaacttttgtacaactttctctctcatactcaca 11121545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 21446279 - 21446225
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| |||||| ||||| |||||| |||||||||||||||||||    
T  21446279 agagaaatgatatttatacaatcattttagtacaactttctctctcatactcaca 21446225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 30414874 - 30414928
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  30414874 agagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactcaca 30414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 16252819 - 16252766
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatactcaca 16252766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 50460771 - 50460719
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactcaca 50460719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 1603011 - 1603058
Alignment:
Q  163 tgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||    
T  1603011 tgatatttgtacaattattttttaacaactttctctctcatactcaca 1603058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 22674710 - 22674749
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  22674710 tagagaaatgatatttgtacaactatttttgtacaatttt 22674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 46903480 - 46903534
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||  ||||| |||||||||||||||||||    
T  46903480 agagaaatgatatttgtacaaccattttgatacaactttctctctcatactcaca 46903534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 50797790 - 50797844
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||| |||||   |||| |||||||||||||||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaactttctctctcatactcaca 50797844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 35030822 - 35030773
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    |||||||| |||||||||||  |||||||||||| |||||||||||||||    
T  35030822 gagaaatgttatttgtacaaccatttttgtacaactttctctctcatact 35030773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 37690429 - 37690482
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||||||    
T  37690429 gagaaatgatatttgtacaatcactttatgacaattttctctctcatactcaca 37690482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 43105105 - 43105142
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  43105105 gagaaatgatatttgtacaattatttttgtataatttt 43105142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 47398511 - 47398458
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| ||| | ||||||  ||||||||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcattttttgacaattttctctctcatactcaca 47398458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 36794613 - 36794652
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  36794613 tagagaaatgatatttgtacaattattttggtataatttt 36794652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 210
Target Start/End: Complemental strand, 40118753 - 40118722
Alignment:
Q  179 atttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||||||||||||    
T  40118753 atttttgtacaattttctctctcatactcaca 40118722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 43757597 - 43757652
Alignment:
Q  155 tagagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||||  |||||  ||||| ||||||| |||||||||||    
T  43757597 tagagaaatgatatttgtacaaccattttgatacaactttctctttcatactcaca 43757652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 48689570 - 48689620
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||| |   |||||| ||||||||||||||||||||||    
T  48689570 gagaaatgatatttgtacaact---tttgtataattttctctctcatactcaca 48689620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 1100216 - 1100254
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  1100216 agagaaatgatatttgtacaaccatttttgtacaatttt 1100254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 19427520 - 19427574
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||| |||||  ||||| |||||| |||||||| ||||||||||    
T  19427520 agagaaatgatatttatacaaccattttggtacaactttctctcacatactcaca 19427574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 21854536 - 21854502
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaa 190  Q
    |||||||||||||||||||||||||||| ||||||    
T  21854536 agagaaatgatatttgtacaattattttggtacaa 21854502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 40596115 - 40596061
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 40596061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 45272221 - 45272167
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  | ||||  |||| |||||||||||||||||||    
T  45272221 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcaca 45272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 48325839 - 48325785
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  |||||   |||||||||| |||||||||||||    
T  48325839 agagaaatgatatttgtacaaccattttgtgacaattttctatctcatactcaca 48325785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 16836175 - 16836122
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||| |||||   |||| ||| |||||||||||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttttctctcatactcaca 16836122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 25239306 - 25239277
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgt 186  Q
    ||||||||||||||||||||||||||||||    
T  25239306 gagaaatgatatttgtacaattatttttgt 25239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 31244804 - 31244767
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  31244804 gagaaatgatatttgtataatcatttttgtacaatttt 31244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 40118786 - 40118749
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaatttt 194  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  40118786 gagaaatgatatttgtacaatcatttttgtataatttt 40118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 40139126 - 40139179
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatactcaca 40139179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 41507254 - 41507201
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    ||||||||||||||||||||  |||||   |||| |||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 41507201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 42412214 - 42412173
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaattttctctctc 201  Q
    |||||||||||||||||||||||| | ||||| |||||||||    
T  42412214 aaatgatatttgtacaattattttaggacaatcttctctctc 42412173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 4154591 - 4154643
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    ||||||||||||| |||||| ||| ||||  |||| |||||||||||||||||    
T  4154591 agagaaatgatatatgtacatttactttttgacaactttctctctcatactca 4154643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 5574329 - 5574297
Alignment:
Q  158 agaaatgatatttgtacaattatttttgtacaa 190  Q
    |||||||||||||||||||| ||||||||||||    
T  5574329 agaaatgatatttgtacaatcatttttgtacaa 5574297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 16987446 - 16987474
Alignment:
Q  156 agagaaatgatatttgtacaattattttt 184  Q
    |||||||||||||||||||||||||||||    
T  16987446 agagaaatgatatttgtacaattattttt 16987474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 26101392 - 26101420
Alignment:
Q  155 tagagaaatgatatttgtacaattatttt 183  Q
    |||||||||||||||||||||||||||||    
T  26101392 tagagaaatgatatttgtacaattatttt 26101420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 35883679 - 35883651
Alignment:
Q  156 agagaaatgatatttgtacaattattttt 184  Q
    |||||||||||||||||||||||||||||    
T  35883679 agagaaatgatatttgtacaattattttt 35883651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 48028536 - 48028584
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcata 204  Q
    ||||||||| |||||||||||| ||||||||| || ||||||| |||||    
T  48028536 agagaaatgttatttgtacaatcatttttgtataactttctctttcata 48028584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 48103449 - 48103398
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactca 208  Q
    |||||||||||||||| |||| ||||| || |||| |||||||||||||||||    
T  48103449 agagaaatgatatttgaacaactatttgtg-acaactttctctctcatactca 48103398  T

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Target: scaffold0286 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 17048 - 17099
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactc 207  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||||||||    
T  17048 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 17099  T

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Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 18707 - 18658
Alignment:
Q  157 gagaaatgatatttgtacaattatttttgtacaattttctctctcatact 206  Q
    ||||||||||||||||||||| | |||   ||||||||||||||||||||    
T  18707 gagaaatgatatttgtacaatcaatttgtgacaattttctctctcatact 18658  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 31661 - 31607
Alignment:
Q  156 agagaaatgatatttgtacaattatttttgtacaattttctctctcatactcaca 210  Q
    |||||||||||||||||||||  ||||||  |||| |||||||||||||||||||    
T  31661 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 31607  T

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Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 9296 - 9337
Alignment:
Q  159 gaaatgatatttgtacaattatttttgtacaattttctctct 200  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  9296 gaaatgatatttgtacaactattttagtacaattttctctct 9337  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 48657 - 48691
Alignment:
Q  160 aaatgatatttgtacaattatttttgtacaatttt 194  Q
    |||||||||||||||||| ||||||||||||||||    
T  48657 aaatgatatttgtacaatcatttttgtacaatttt 48691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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