View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10107_low_7 (Length: 432)
Name: NF10107_low_7
Description: NF10107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10107_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 421
Target Start/End: Complemental strand, 7477146 - 7476745
Alignment:
| Q |
16 |
aaagaatattgtagagtttttaaatgataagttcataannnnnnnnnnnnnnngagagagtgataagttcatagtttaaactctaaaaactgacattatt |
115 |
Q |
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| T |
7477146 |
aaagaatattgtagagtttttaaatgataagttcataattttttgttttttt-gagagagtgataagttcatagtttaaactctaaaaactaacattat- |
7477049 |
T |
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| Q |
116 |
ctctaactaattaattaatacttattgataaaaacaaatgatcttatgtcatattagactttggcatctctatcactgttacgatcatttgggaatatta |
215 |
Q |
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| T |
7477048 |
ctctaactaattaattaatacttattgataaaaacaaatgatcttatgtcatattagactttggcatctctatcactgttacgatcatttgggaatatta |
7476949 |
T |
|
| Q |
216 |
tatgctgccattagagttt-ataacatgcatgtgttgatcttattcgacaccatattttatttcttgaattctttaatggcaacgcggcaattcttgcat |
314 |
Q |
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| T |
7476948 |
tatgctgccattagagttttataacatgcatgtgttgatcttattcgacaccatattttatttcttgaattctttaatggcaacgcggcaattcttgcat |
7476849 |
T |
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| Q |
315 |
tcattattagttgatgtgtcaattacatgtcctctaataaaaacatgcataccnnnnnnnnaaaataaaaaatatttaaggtgaaggaataatgtcccat |
414 |
Q |
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| T |
7476848 |
tcattattagttgatgtgtcaattacatgtcctctaataaaaacatgcatacc-tttttttaaaat--aaaatatttaaggtgaaggaataatgtcccat |
7476752 |
T |
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| Q |
415 |
gcttctt |
421 |
Q |
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| T |
7476751 |
gcatctt |
7476745 |
T |
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