View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10108_low_8 (Length: 442)
Name: NF10108_low_8
Description: NF10108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10108_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 18 - 432
Target Start/End: Original strand, 11680993 - 11681406
Alignment:
| Q |
18 |
gttgttaaaatatgagtattccaatcttcaactgatccgaccctatacaagtaaactagatcccctatcatatgagtaaatttgaaggaaaatatgaaaa |
117 |
Q |
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| T |
11680993 |
gttgttaaaatatgagtattccattcttcaactgatccgaccctatacaagtaaactagatcccctatcatgtgagtaaatttgaaggaaaatatgaaaa |
11681092 |
T |
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| Q |
118 |
tatacatgaaagaaactttgcatagttgtgaacctttgtggcaaactagctaggcttaataacatgaaacataaagagacaagaaaaccaaaatatttat |
217 |
Q |
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| T |
11681093 |
tatacatgaaagaaactttgcatagttgtgaacctttgtagcaaactagctaggcttaataacatgaaacataaagagacaagaaaaccaaaatatttat |
11681192 |
T |
|
| Q |
218 |
ttctcaagaaagtgcatgccaaaagtaaataaacaagacatggcattaagcaattttgggaatagagatatcttttccaaggtagttgagtgatgaagga |
317 |
Q |
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| T |
11681193 |
ttcttaagaaagtgcatgccaaaagtaaataaacaagacat-gcattaagcaattttgggaatagagatatcttttccaaggtagttgagtgatgaagga |
11681291 |
T |
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| Q |
318 |
ttgacttgcatgaataagtagtttccagcaaaaagatcaccaaaatgaacttgtccatctttgaatctcttcaccactttagcacaagaaactctcatgg |
417 |
Q |
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| T |
11681292 |
ttgacttgcatgaacaagtagtttccagcaaaaagatcaccaaaatgaacttgtccatctttgaatctcttcaccactttagcacaagaaactctcatgg |
11681391 |
T |
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| Q |
418 |
aagataccacctttg |
432 |
Q |
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| T |
11681392 |
aagataccacctttg |
11681406 |
T |
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