View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10109_low_6 (Length: 357)
Name: NF10109_low_6
Description: NF10109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10109_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 19 - 346
Target Start/End: Original strand, 36099365 - 36099692
Alignment:
| Q |
19 |
tttgagacttccgtaaatcgttcatacaaaaattggtaaagagtctaaagactttgtacatggctggcagtaaatttattatctcttctgcaaacaaaca |
118 |
Q |
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| T |
36099365 |
tttgagacttccgtaaatcgttcatacaaaaattggtaaagagtctaaagactttgtacatggctggcagtaaatttattatctcttctgcaaacaaaca |
36099464 |
T |
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| Q |
119 |
cataccatgcagaattacatcttttttgccatgattgttggatccaacatatttaggtccaattacatttcattttcaacacaaaaactccatttggaaa |
218 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
36099465 |
cataccatccagaattacatcttttttgccatgattgttggatccaacatatttaggtccaattacatttcattttcaacacgaaaactccatttggaaa |
36099564 |
T |
|
| Q |
219 |
attatgaacggataactaagaaagtacattacttgataattttatcatttgtaaagtatttcagtacattcatttaaaactcaccaggtcaacatcagag |
318 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36099565 |
attatgaaccgataactaagaaagtacattacttgataattttatcatttgtaaagtatttcagtacattcatttaaaactcaccaggtcaacatcagag |
36099664 |
T |
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| Q |
319 |
cctaacatctttcgagccttctcttcat |
346 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
36099665 |
cctaacatctttcgagccttctcttcat |
36099692 |
T |
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