View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10110_1D_low_12 (Length: 305)
Name: NF10110_1D_low_12
Description: NF10110_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10110_1D_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 40225163 - 40225467
Alignment:
| Q |
1 |
tttttatgactttgctcatatgctacaaagaaatatacttaccaatttaccaaagcnnnnnnnncaatgagagtagttatataagtgaataaaccgcaga |
100 |
Q |
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| T |
40225163 |
tttttatgactttgctcatatgctacaaagaaatatacttaccaatttaccaaagcaaaaaaaacaatgagagtagctatataagtgaataaaccgcaga |
40225262 |
T |
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| Q |
101 |
taggaagttattaaaacgtgggtcaatggcattgctataagagagtcatgcgtgacggttttttgagaagcaagagaaaactactactactattatagnn |
200 |
Q |
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| T |
40225263 |
taggaagttattaaaacgtgggtcaatggcattgctataagagagtcatgcgtgacggttttttgagaagcaagagaaaactactactactattatagtt |
40225362 |
T |
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| Q |
201 |
nnnnnngaatgaaaatggatgagtaaaatatgaagctatagcaccaaatatataagtggaggaaaaaattacttacaaaaattgaccaagaacgtgggcg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40225363 |
ttttttgaatgaaaatggatgagtaaaatatgaagctatagcaccaaatatataagtggaggaaaaaattacttacaaaaattgaccaagaacgtgggcg |
40225462 |
T |
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| Q |
301 |
taacg |
305 |
Q |
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||||| |
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| T |
40225463 |
taacg |
40225467 |
T |
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