View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10110_1D_low_23 (Length: 250)
Name: NF10110_1D_low_23
Description: NF10110_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10110_1D_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 32259237 - 32259480
Alignment:
| Q |
1 |
ggtttgatattgatctatcaagggaggagaccttacgaggcaacggaaatgtctcactttcatttaattcccagggggtgttgaaaatttgtgtaaaaaa |
100 |
Q |
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| T |
32259237 |
ggtttgatattgatctatcaatggaggagaccttacgaggcaacggaaatgtctcactttcatttaattcccagggggtgttgaaaatttgtgtaaaaaa |
32259336 |
T |
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| Q |
101 |
tgatagaaatgttggctcttatggcattttttctggagataatccatttgatttcactcttccggcaacattgttccaaatcatcgttattgtcgtcctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32259337 |
tgatagaaatgttggctcttatggcattttttctggagataatccattcgatttcactcttccggcaacattgttccaaatcatcattattgtcgtcctc |
32259436 |
T |
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| Q |
201 |
tctcaaactctttactttcttctcaggccattacgaacaccaaa |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32259437 |
tctcaaactctttactttcttctcaggccattacgaacaccaaa |
32259480 |
T |
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