View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10110_1D_low_6 (Length: 421)
Name: NF10110_1D_low_6
Description: NF10110_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10110_1D_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 18 - 387
Target Start/End: Complemental strand, 25121093 - 25120720
Alignment:
| Q |
18 |
acatcatatgagaaggtttgaaagtaaaaaatttattgtgagaaatggatggatgtttgtgggtgcttgcaagagagggtggtatagactcagaatgaat |
117 |
Q |
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| T |
25121093 |
acataatatgagaaggtttgaaagtaaaaaatttattgtgagaagtggatggatgtttgtgggtgcttgcaagagagggtggtatagactcagaatgaac |
25120994 |
T |
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| Q |
118 |
ctcaacttttgagattaaaataggaatgatgcttggtttttgtgttggtaatgcttgttttttgtgcagcaacaacac-ttgtagggttggcaaagttgt |
216 |
Q |
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| T |
25120993 |
ctcaacttttgagatcaaaataggaatgatgcttggtttttgtgttgggaatgcttgttttttgtgcagcaacaacactttgtagggttggcaaagtcat |
25120894 |
T |
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| Q |
217 |
caata----tccatcgtccaagaaatggaaacaagaagtgctagaattacaggacttttagcttcttacatttgtcatgataattatttcaagaagttta |
312 |
Q |
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| T |
25120893 |
caatagatgtccatcatccaaaaaatggaaacaagaagtgctacatttacaggacttttagcttcttacatttgttatgataattatgtcaagaa-tttt |
25120795 |
T |
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| Q |
313 |
tttgtaattcagagatagtaatttttatatgtagcatttc-tttaagggtttatattaatgttaaagattgttgaa |
387 |
Q |
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| T |
25120794 |
tctataattcagggat-gtaatgtttatatgcagcatttcgtgtaagggtttatattaatgttaaagattgttgaa |
25120720 |
T |
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