View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10110_low_16 (Length: 282)

Name: NF10110_low_16
Description: NF10110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10110_low_16
NF10110_low_16
[»] scaffold0147 (2 HSPs)
scaffold0147 (17-282)||(4795-5060)
scaffold0147 (94-282)||(12641-12829)
[»] chr1 (34 HSPs)
chr1 (153-264)||(12593449-12593560)
chr1 (149-213)||(46252674-46252738)
chr1 (148-264)||(27140436-27140557)
chr1 (148-207)||(32859937-32859996)
chr1 (153-211)||(23902063-23902121)
chr1 (148-213)||(28689443-28689508)
chr1 (148-185)||(48816730-48816767)
chr1 (153-213)||(10199404-10199464)
chr1 (161-213)||(14629970-14630022)
chr1 (148-204)||(31517731-31517787)
chr1 (149-213)||(37593676-37593740)
chr1 (148-203)||(6292517-6292572)
chr1 (148-186)||(3070081-3070119)
chr1 (167-213)||(12564509-12564555)
chr1 (163-213)||(35590898-35590948)
chr1 (148-186)||(42397766-42397804)
chr1 (165-199)||(43954053-43954087)
chr1 (236-282)||(45769834-45769880)
chr1 (238-271)||(3052776-3052809)
chr1 (148-185)||(3223709-3223746)
chr1 (148-201)||(4699606-4699659)
chr1 (151-204)||(8016280-8016333)
chr1 (153-214)||(12477283-12477344)
chr1 (161-202)||(15361065-15361106)
chr1 (148-213)||(31118057-31118122)
chr1 (148-213)||(35925704-35925769)
chr1 (148-185)||(38578570-38578607)
chr1 (153-185)||(5886990-5887022)
chr1 (153-213)||(7136994-7137054)
chr1 (161-213)||(28077073-28077125)
chr1 (153-213)||(34290250-34290310)
chr1 (148-184)||(38170681-38170717)
chr1 (162-210)||(38503470-38503518)
chr1 (163-199)||(48748321-48748357)
[»] chr6 (17 HSPs)
chr6 (148-212)||(4420658-4420722)
chr6 (151-199)||(6536975-6537023)
chr6 (148-209)||(30863264-30863325)
chr6 (148-203)||(7785735-7785790)
chr6 (148-199)||(7931717-7931768)
chr6 (159-210)||(17241254-17241305)
chr6 (159-202)||(27909640-27909683)
chr6 (148-199)||(34403883-34403934)
chr6 (148-201)||(9667976-9668029)
chr6 (148-185)||(22743523-22743560)
chr6 (148-213)||(34939758-34939823)
chr6 (148-204)||(3528826-3528882)
chr6 (153-213)||(6647401-6647461)
chr6 (148-204)||(8147057-8147112)
chr6 (151-199)||(9027606-9027654)
chr6 (148-180)||(10657449-10657481)
chr6 (238-282)||(24774691-24774735)
[»] chr8 (17 HSPs)
chr8 (159-213)||(42215084-42215138)
chr8 (148-202)||(11185246-11185300)
chr8 (148-185)||(2594988-2595025)
chr8 (135-211)||(11183561-11183637)
chr8 (153-213)||(20672764-20672824)
chr8 (164-204)||(30918136-30918176)
chr8 (148-200)||(41606894-41606946)
chr8 (151-202)||(25869260-25869311)
chr8 (147-197)||(13000414-13000464)
chr8 (148-185)||(779052-779089)
chr8 (148-213)||(39866725-39866790)
chr8 (148-213)||(43504765-43504830)
chr8 (148-212)||(7918437-7918501)
chr8 (148-200)||(12851203-12851255)
chr8 (238-282)||(14482135-14482179)
chr8 (150-210)||(21653098-21653158)
chr8 (161-213)||(28769343-28769395)
[»] chr5 (20 HSPs)
chr5 (148-213)||(37611206-37611271)
chr5 (148-213)||(37787936-37788001)
chr5 (151-213)||(12242704-12242766)
chr5 (164-213)||(7907895-7907944)
chr5 (148-213)||(10125709-10125774)
chr5 (148-213)||(17368690-17368755)
chr5 (154-211)||(33533536-33533593)
chr5 (221-265)||(5563654-5563698)
chr5 (238-282)||(35095876-35095920)
chr5 (148-195)||(18704027-18704074)
chr5 (167-213)||(38104867-38104913)
chr5 (149-202)||(37526191-37526244)
chr5 (149-202)||(37690628-37690681)
chr5 (148-213)||(40205065-40205130)
chr5 (161-213)||(12521542-12521594)
chr5 (153-185)||(16863822-16863854)
chr5 (154-202)||(19138714-19138762)
chr5 (161-213)||(19460581-19460633)
chr5 (161-213)||(28413288-28413340)
chr5 (167-211)||(40590774-40590818)
[»] chr3 (21 HSPs)
chr3 (148-213)||(37273148-37273213)
chr3 (148-200)||(31010429-31010481)
chr3 (159-236)||(20669164-20669240)
chr3 (148-213)||(21574504-21574569)
chr3 (157-210)||(21862175-21862228)
chr3 (148-213)||(36200110-36200175)
chr3 (148-197)||(42745068-42745117)
chr3 (154-199)||(45432936-45432981)
chr3 (148-200)||(43115083-43115135)
chr3 (154-197)||(11039336-11039379)
chr3 (148-202)||(3044250-3044304)
chr3 (80-138)||(25459541-25459599)
chr3 (131-213)||(30573888-30573970)
chr3 (159-213)||(33883752-33883806)
chr3 (148-194)||(38318993-38319039)
chr3 (148-214)||(50952346-50952412)
chr3 (148-185)||(20267170-20267207)
chr3 (153-202)||(37825147-37825196)
chr3 (148-185)||(41724254-41724291)
chr3 (153-213)||(24785219-24785279)
chr3 (153-201)||(43397853-43397901)
[»] chr2 (23 HSPs)
chr2 (148-213)||(34652027-34652092)
chr2 (149-213)||(43199776-43199840)
chr2 (162-213)||(35379021-35379072)
chr2 (148-211)||(41809236-41809299)
chr2 (148-210)||(29316766-29316828)
chr2 (148-202)||(40158743-40158797)
chr2 (145-202)||(1939320-1939377)
chr2 (154-211)||(16867755-16867812)
chr2 (129-202)||(43065422-43065495)
chr2 (148-203)||(28677650-28677705)
chr2 (148-202)||(41817193-41817247)
chr2 (151-185)||(43910993-43911027)
chr2 (148-201)||(7283022-7283075)
chr2 (160-213)||(12313176-12313229)
chr2 (148-185)||(30538164-30538201)
chr2 (148-185)||(33525958-33525995)
chr2 (160-213)||(38078413-38078466)
chr2 (148-184)||(1056120-1056156)
chr2 (148-200)||(1647263-1647315)
chr2 (148-184)||(7782787-7782823)
chr2 (148-180)||(19977994-19978026)
chr2 (168-228)||(35329829-35329889)
chr2 (161-213)||(44443335-44443387)
[»] chr7 (17 HSPs)
chr7 (148-214)||(9423585-9423651)
chr7 (148-213)||(7244694-7244759)
chr7 (153-213)||(39280983-39281043)
chr7 (148-240)||(39360011-39360102)
chr7 (153-204)||(35267385-35267436)
chr7 (159-213)||(24363603-24363657)
chr7 (154-240)||(39345459-39345544)
chr7 (148-202)||(46082061-46082115)
chr7 (148-185)||(11048069-11048106)
chr7 (148-185)||(20888385-20888422)
chr7 (221-265)||(35007554-35007599)
chr7 (148-213)||(43250690-43250755)
chr7 (148-200)||(12234880-12234932)
chr7 (148-204)||(22551396-22551452)
chr7 (148-204)||(25670577-25670633)
chr7 (148-184)||(36537951-36537987)
chr7 (148-240)||(39334181-39334272)
[»] chr4 (21 HSPs)
chr4 (148-213)||(53673649-53673714)
chr4 (148-200)||(1137739-1137791)
chr4 (238-282)||(17884001-17884045)
chr4 (238-282)||(21593104-21593148)
chr4 (159-202)||(7694012-7694055)
chr4 (161-211)||(5131254-5131304)
chr4 (223-265)||(28141530-28141572)
chr4 (160-202)||(43824308-43824350)
chr4 (168-213)||(2592320-2592365)
chr4 (168-213)||(14011248-14011293)
chr4 (148-213)||(23819103-23819168)
chr4 (148-213)||(29263384-29263449)
chr4 (161-202)||(35405972-35406013)
chr4 (148-201)||(56186892-56186945)
chr4 (148-204)||(1312864-1312920)
chr4 (161-213)||(17884082-17884134)
chr4 (169-213)||(18628555-18628599)
chr4 (160-200)||(24929520-24929560)
chr4 (153-185)||(30631508-30631540)
chr4 (238-282)||(39438629-39438673)
chr4 (149-185)||(46401306-46401342)


Alignment Details
Target: scaffold0147 (Bit Score: 266; Significance: 1e-148; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 17 - 282
Target Start/End: Original strand, 4795 - 5060
Alignment:
Q  17 cagtctcatattttctaagactcttatcaaatctgagaaagcatataaagatagaaaaaatgattagggtgtgttaggattgactcatttggactcatca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4795 cagtctcatattttctaagactcttatcaaatctgagaaagcatataaagatagaaaaaatgattagggtgtgttaggattgactcatttggactcatca 4894  T
Q  117 actagcataagcacttgtgagaccttagaataacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4895 actagcataagcacttgtgagaccttagaataacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgt 4994  T
Q  217 gaacagcttatatgaaaacagtttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4995 gaacagcttatatgaaaacagtttattttatctttagttatagaaatagtttacatatgagcactt 5060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 94 - 282
Target Start/End: Original strand, 12641 - 12829
Alignment:
Q  94 gattgactcatttggactcatcaactagcataagcacttgtgagaccttagaataacaacttataacatgttcataagttgttttcagcttaactccata 193  Q
    |||||||| ||||| ||| ||| |||||||||||||||||||||||||||    |||||||||| |||||| |||||||||||||||||||| |||||||    
T  12641 gattgacttatttgaacttatccactagcataagcacttgtgagaccttatggaaacaacttatgacatgtccataagttgttttcagcttagctccata 12740  T
Q  194 agctctccaaggtagcttattgtgaacagcttatatgaaaacagtttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    ||||||| ||| |||||| |||  |||||||||||||||||||||| ||| ||||||||||||| |||||| ||||  ||| |||||||    
T  12741 agctctctaagatagcttcttgaaaacagcttatatgaaaacagttcattctatctttagttattgaaataatttatttataagcactt 12829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 12593449 - 12593560
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgtgaacagcttatatgaaaacag-tttattttatcttt 251  Q
    |||||||||||| |||||||||||||||| || | ||||||||| ||||||| ||||||| ||  |||||||||| ||||| ||| ||||||| ||||||    
T  12593449 cttataacatgtgcataagttgttttcaggtttattccataagcgctccaagatagctta-tgaaaacagcttatttgaaagcagttttatttaatcttt 12593547  T
Q  252 agttatagaaata 264  Q
     ||||||||||||    
T  12593548 tgttatagaaata 12593560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 46252674 - 46252738
Alignment:
Q  149 acaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||| ||||||||||||||||||||||| |||  | ||||||||||||||| ||||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttat 46252738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 27140557 - 27140436
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgtgaacagcttatatgaaaacagt------tta 241  Q
    |||| ||||| |||||| ||||||||||||||||||||  | ||||||||||||| | ||||||| |   |||||||||||| |||||| |      |||    
T  27140557 aacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagctta-taaaaacagcttatataaaaacaatttaatatta 27140459  T
Q  242 ttttatctttagttatagaaata 264  Q
    |||||||||| ||||||||||||    
T  27140458 ttttatcttttgttatagaaata 27140436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 32859937 - 32859996
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggta 207  Q
    ||||| ||||||||||||||||| |||||||||||||   ||||||||||||||| ||||    
T  32859937 aacaatttataacatgttcataaattgttttcagcttgtttccataagctctccagggta 32859996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 23902063 - 23902121
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagctt 211  Q
    |||||| ||||| ||||||||||||||||||||  ||||||||||||| ||| ||||||    
T  23902063 cttatagcatgtgcataagttgttttcagcttacttccataagctctctaagatagctt 23902121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 28689443 - 28689508
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||| |||||| ||||||||||||||||||||  | |||||||| |||||| ||||||||    
T  28689443 aacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttat 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 48816767 - 48816730
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  48816767 aacaacttataacatgttcataagttgttttgagctta 48816730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 10199404 - 10199464
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||| |||||||||||||||||||||||||||  | ||||||||||| ||  ||||||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttat 10199464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 14629970 - 14630022
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||||    
T  14629970 atgttcataagttgttttcagcttatttccataaagtctccaagatagcttat 14630022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 31517731 - 31517787
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    ||||||| || ||||||||||||| |||||||||||||  | |||||||||||||||    
T  31517731 aacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaag 31517787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 37593676 - 37593740
Alignment:
Q  149 acaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||| ||||||||||||| |||||||||||||  | |||||||||| |||  ||||||||    
T  37593676 acaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttat 37593740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 6292572 - 6292517
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaa 203  Q
    |||| ||||| ||||||||||||| |||||||||||||  | ||||||||||||||    
T  6292572 aacagcttatgacatgttcataagctgttttcagcttattttcataagctctccaa 6292517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 3070081 - 3070119
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaa 186  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  3070081 aacaacttatgacatgttcataagctgttttcagcttaa 3070119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 12564509 - 12564555
Alignment:
Q  167 ataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||||  |||||||| |||||||| ||||||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttat 12564555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 35590898 - 35590948
Alignment:
Q  163 gttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||| ||||||||||||||||  ||||||||||||||| | ||||||||    
T  35590898 gttcatcagttgttttcagcttatttccataagctctccatgatagcttat 35590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 42397804 - 42397766
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaa 186  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  42397804 aacaacttatggcatgttcataagttgttttcagcttaa 42397766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 43954053 - 43954087
Alignment:
Q  165 tcataagttgttttcagcttaactccataagctct 199  Q
    ||||||||||||||||||||| |||||||||||||    
T  43954053 tcataagttgttttcagcttatctccataagctct 43954087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 45769834 - 45769880
Alignment:
Q  236 agtttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    |||||||||||||||| |||||||||||| |||||| || |||||||    
T  45769834 agtttattttatcttttgttatagaaataatttacacataagcactt 45769880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 3052776 - 3052809
Alignment:
Q  238 tttattttatctttagttatagaaatagtttaca 271  Q
    |||||||||||||||||||||||||||| |||||    
T  3052776 tttattttatctttagttatagaaatagcttaca 3052809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 3223746 - 3223709
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  3223746 aacaacttatgacatgtttataagttgttttcagctta 3223709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 4699606 - 4699659
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcc 201  Q
    |||||||||| ||||||||||||| |||||| ||||||  || |||||||||||    
T  4699606 aacaacttatgacatgttcataagctgtttttagcttatttctataagctctcc 4699659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 8016333 - 8016280
Alignment:
Q  151 aacttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    ||||||| |||||||||||| ||||||||||||||  | | |||||||||||||    
T  8016333 aacttatgacatgttcataacttgttttcagcttattttcctaagctctccaag 8016280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 12477283 - 12477344
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttatt 214  Q
    ||||| |||||| ||||||||||||||||||||  ||||||  ||||||| | |||||||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttatt 12477344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 15361106 - 15361065
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||||||||||||||||||||||||  | |||||||||||||    
T  15361106 atgttcataagttgttttcagcttattttcataagctctcca 15361065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 31118122 - 31118057
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||| |||||||||| ||||||||||||||||  |||||||| ||  || ||||||||||    
T  31118122 aacatcttatgacatgttcatcagttgttttcagcttatttccataagttcatcagggtagcttat 31118057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 35925769 - 35925704
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||| ||||||||||||| |||||||| ||||  ||||||| ||||||| | ||||||||    
T  35925769 aacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttat 35925704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 38578607 - 38578570
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  38578607 aacaacttataacatattcataagttgttttgagctta 38578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 5886990 - 5887022
Alignment:
Q  153 cttataacatgttcataagttgttttcagctta 185  Q
    ||||| |||||||||||||||||||||||||||    
T  5886990 cttatgacatgttcataagttgttttcagctta 5887022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 7136994 - 7137054
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||| |||| |||||||||| |||||||||||  | |||||| |||||||| ||||||||    
T  7136994 cttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttat 7137054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 28077073 - 28077125
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||||||||||  || |||||||||| ||  ||||||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctctaaaatagcttat 28077125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 34290310 - 34290250
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||| |||| ||||||||||||||||||||||  | |||||| ||| |||| ||||||||    
T  34290310 cttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttat 34290250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 38170681 - 38170717
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctt 184  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  38170681 aacagcttatgacatgttcataagttgttttcagctt 38170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 38503470 - 38503518
Alignment:
Q  162 tgttcataagttgttttcagcttaactccataagctctccaaggtagct 210  Q
    ||||||||||||||||||||||||  | |||||| |||||||| |||||    
T  38503470 tgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 48748321 - 48748357
Alignment:
Q  163 gttcataagttgttttcagcttaactccataagctct 199  Q
    |||||||||||||||||||||||  ||||||||||||    
T  48748321 gttcataagttgttttcagcttatttccataagctct 48748357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 4420722 - 4420658
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagctta 212  Q
    ||||| |||| ||||||||||||| |||||||||||||  ||||||||||||||||| |||||||    
T  4420722 aacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagctta 4420658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 6537023 - 6536975
Alignment:
Q  151 aacttataacatgttcataagttgttttcagcttaactccataagctct 199  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctct 6536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 30863325 - 30863264
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagc 209  Q
    |||||||||| |||||| ||||||||||||||||||||  || ||||||||| |||| ||||    
T  30863325 aacaacttatgacatgtacataagttgttttcagcttacttctataagctcttcaagctagc 30863264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 7785735 - 7785790
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaa 203  Q
    |||| ||||| ||||||  |||||||||||||||||||  ||||||||||||||||    
T  7785735 aacagcttatgacatgtctataagttgttttcagcttatttccataagctctccaa 7785790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 7931717 - 7931768
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctct 199  Q
    |||||||||| |||||||| ||||||||||||||||||  ||| ||||||||    
T  7931717 aacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctct 7931768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 17241254 - 17241305
Alignment:
Q  159 acatgttcataagttgttttcagcttaactccataagctctccaaggtagct 210  Q
    |||||||||||||||||||||| ||||  ||||||| ||||||||| |||||    
T  17241254 acatgttcataagttgttttcaacttatttccataaactctccaagatagct 17241305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 27909640 - 27909683
Alignment:
Q  159 acatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||||| ||||||||||||||||||||  |||||||||||||||    
T  27909640 acatgtccataagttgttttcagcttatttccataagctctcca 27909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 34403934 - 34403883
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctct 199  Q
    |||||||||| ||||||||||||| |||||||| ||||  ||||||||||||    
T  34403934 aacaacttatgacatgttcataaggtgttttcaccttatttccataagctct 34403883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 9667976 - 9668029
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcc 201  Q
    |||||||||| |||||| |||||| |||||||| ||||  ||||||||||||||    
T  9667976 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctcc 9668029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 22743560 - 22743523
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  22743560 aacaacttattacatgttcataagctgttttcagctta 22743523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 34939823 - 34939758
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||| |||||| ||||| ||||||||||||||  ||||||| ||||||| | ||||||||    
T  34939823 aacagcttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttat 34939758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 3528882 - 3528826
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    |||||||||| |||||| ||||| ||||||||| ||||  | |||||||||||||||    
T  3528882 aacaacttatgacatgtccataacttgttttcatcttattttcataagctctccaag 3528826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 6647461 - 6647401
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||| ||||||||||||| |||||||| ||||  | ||||||||||| ||| ||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttat 6647401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 8147057 - 8147112
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    ||||||||||||||| | |||||| | |||||| |||| ||||||||||||||||||    
T  8147057 aacaacttataacatatgcataagctattttcaactta-ctccataagctctccaag 8147112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 9027654 - 9027606
Alignment:
Q  151 aacttataacatgttcataagttgttttcagcttaactccataagctct 199  Q
    ||||||| |||||| ||||||||||||||||||||  | ||||||||||    
T  9027654 aacttatgacatgtccataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 10657481 - 10657449
Alignment:
Q  148 aacaacttataacatgttcataagttgttttca 180  Q
    ||||| |||||||||||||||||||||||||||    
T  10657481 aacaatttataacatgttcataagttgttttca 10657449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 24774735 - 24774691
Alignment:
Q  238 tttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    |||||||||| ||| ||||||||||||||||| |||| |||||||    
T  24774735 tttattttatattttgttatagaaatagtttatatataagcactt 24774691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 42215084 - 42215138
Alignment:
Q  159 acatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  42215084 acatgttcataagttgttttcagcttatttacataagctctccaagatagcttat 42215138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 11185300 - 11185246
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||| |||||||||    
T  11185300 aacatcttataacatgttcataagttgttttcaacttatttccatcagctctcca 11185246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 2594988 - 2595025
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2594988 aacaacttatgacatgttcataagttgttttcagctta 2595025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 11183637 - 11183561
Alignment:
Q  135 gagaccttagaataacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagctt 211  Q
    |||| |||| || |||||||||| | ||||  ||||| |||||||||||||  ||||||||||||||| ||||||||    
T  11183637 gagagcttataaaaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagctt 11183561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 20672824 - 20672764
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||| ||||||||||||| |||||||||||||  | ||||||||||||| | ||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttat 20672764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 30918176 - 30918136
Alignment:
Q  164 ttcataagttgttttcagcttaactccataagctctccaag 204  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  30918176 ttcataagttgttttcagcttatttccataagctctccaag 30918136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 41606894 - 41606946
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctc 200  Q
    |||| ||||| ||||||||| |||||||||||||||||  |||||||||||||    
T  41606894 aacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctc 41606946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 25869260 - 25869311
Alignment:
Q  151 aacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    ||||||| |||||| ||||||||||||||||||||  ||||||| |||||||    
T  25869260 aacttatgacatgtccataagttgttttcagcttatttccataaactctcca 25869311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 13000414 - 13000464
Alignment:
Q  147 taacaacttataacatgttcataagttgttttcagcttaactccataagct 197  Q
    ||||||||||| |||||| || |||||||||||||||||  ||||||||||    
T  13000414 taacaacttatgacatgtccacaagttgttttcagcttatttccataagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 779052 - 779089
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  779052 aacaacttatgacatgttcataagttgttttcatctta 779089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 39866725 - 39866790
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||| ||||| |||||| ||||||||| |||  | |||||||||| |||| ||||||||    
T  39866725 aacaacttatagcatgtccataagctgttttcagtttattttcataagctcttcaagatagcttat 39866790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 43504830 - 43504765
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||  || |||| ||||| |||||||||||||  |||||||| |||||||| ||||||||    
T  43504830 aacaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttat 43504765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 7918437 - 7918501
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagctta 212  Q
    |||||||||  ||||||||||||| ||||| || ||||  || |||||||||||||| |||||||    
T  7918437 aacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagctta 7918501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 12851255 - 12851203
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctc 200  Q
    |||| ||||||||||||||||||| ||||||| |||||  | |||||||||||    
T  12851255 aacagcttataacatgttcataagatgttttcggcttattttcataagctctc 12851203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 14482179 - 14482135
Alignment:
Q  238 tttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    |||||||||||||| ||||||||||||||||| | || |||||||    
T  14482179 tttattttatcttttgttatagaaatagtttatacataagcactt 14482135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 21653158 - 21653098
Alignment:
Q  150 caacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagct 210  Q
    |||||||| ||| ||||||||| | |||||||||||  | ||||||||||||||| |||||    
T  21653158 caacttatgacacgttcataagctattttcagcttattttcataagctctccaagatagct 21653098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 28769343 - 28769395
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||||||||||||||||||  ||||||| ||||||||  ||||||||    
T  28769343 atgtccataagttgttttcagcttatttccataaactctccaaaatagcttat 28769395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 37611206 - 37611271
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||| | ||||||||||||| ||||||||| |||  ||||||||||||||||| ||||||||    
T  37611206 aacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttat 37611271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 37787936 - 37788001
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||| | ||||||||||||| ||||||||| |||  ||||||||||||||||| ||||||||    
T  37787936 aacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttat 37788001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 12242704 - 12242766
Alignment:
Q  151 aacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||| |||||  ||| ||||||||||||||||  ||||||||||||||||| ||||||||    
T  12242704 aacttatgacatgaacattagttgttttcagcttacttccataagctctccaagatagcttat 12242766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 7907944 - 7907895
Alignment:
Q  164 ttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||||||||||||||| | |||||||||||||||  |||||||    
T  7907944 ttcataagttgttttcagcttaatttcataagctctccaagacagcttat 7907895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 10125709 - 10125774
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||| ||||||| ||||| |||||||||||||  | ||||||||||||| |||| |||||    
T  10125709 aacaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttat 10125774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 17368755 - 17368690
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||| ||||||||||| |  ||||||||||||  ||||||| ||||||||| ||||||||    
T  17368755 aacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttat 17368690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 33533536 - 33533593
Alignment:
Q  154 ttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagctt 211  Q
    |||| |||| ||||||||||||||||| ||||  ||||||||||||||||| ||||||    
T  33533536 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagctt 33533593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 5563698 - 5563654
Alignment:
Q  221 agcttatatgaaaacagtttattttatctttagttatagaaatag 265  Q
    |||||||||||||| | |||||||||||||| |||||||||||||    
T  5563698 agcttatatgaaaataatttattttatcttttgttatagaaatag 5563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 35095876 - 35095920
Alignment:
Q  238 tttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||    
T  35095876 tttattttatcttttgttatagaaatagtttaaatataagcactt 35095920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 18704027 - 18704074
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataag 195  Q
    |||||||||||||||||  |||||||||||||||||||  ||||||||    
T  18704027 aacaacttataacatgtctataagttgttttcagcttatttccataag 18704074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 38104867 - 38104913
Alignment:
Q  167 ataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 37526191 - 37526244
Alignment:
Q  149 acaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    ||||| ||| ||||||| ||||| |||||||||||||  |||||||||||||||    
T  37526191 acaacctatgacatgttaataagctgttttcagcttatttccataagctctcca 37526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 37690628 - 37690681
Alignment:
Q  149 acaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    ||||| ||| ||||||| ||||| |||||||||||||  |||||||||||||||    
T  37690628 acaacctatgacatgttaataagctgttttcagcttatttccataagctctcca 37690681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 40205065 - 40205130
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| |||||||||||| |||||  |||||||||||||  || |||||||||||| | ||||||||    
T  40205065 aacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttat 40205130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 12521594 - 12521542
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||| |||||||||||||  |||||||||||| |||  ||||||||    
T  12521594 atgttcataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 16863854 - 16863822
Alignment:
Q  153 cttataacatgttcataagttgttttcagctta 185  Q
    |||||||||||||| ||||||||||||||||||    
T  16863854 cttataacatgttcttaagttgttttcagctta 16863822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 19138714 - 19138762
Alignment:
Q  154 ttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||| |||||| ||||| ||||||||||||||  |||||||||||||||    
T  19138714 ttatgacatgtacataaattgttttcagcttatttccataagctctcca 19138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 19460633 - 19460581
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||| ||||||||||| |  ||||||||||||||| | ||||||||    
T  19460633 atgttcataagatgttttcagctcatttccataagctctccatgatagcttat 19460581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 28413288 - 28413340
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||| |||||||||||||  ||||||| ||||||||| || |||||    
T  28413288 atgttcataagctgttttcagcttatttccataaactctccaagataacttat 28413340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 40590818 - 40590774
Alignment:
Q  167 ataagttgttttcagcttaactccataagctctccaaggtagctt 211  Q
    |||||||||||| ||||||  ||||||||||||||||| ||||||    
T  40590818 ataagttgttttgagcttatttccataagctctccaagttagctt 40590774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 37273213 - 37273148
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||| |||||| ||||||||||||||| ||||  |||||||| |||||||| ||||||||    
T  37273213 aacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttat 37273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 31010481 - 31010429
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctc 200  Q
    |||||||||| |||||| |||||| |||||||||||||| |||||||||||||    
T  31010481 aacaacttatgacatgtccataagctgttttcagcttaattccataagctctc 31010429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 20669240 - 20669164
Alignment:
Q  159 acatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgtgaacagcttatatgaaaaca 236  Q
    ||||||||||||| ||||||| |||||  | ||||||||||||||| ||||||| ||  |||||||||||||| ||||    
T  20669240 acatgttcataagctgttttccgcttatttacataagctctccaagatagctta-tgaaaacagcttatatgacaaca 20669164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 21574569 - 21574504
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||| ||||||||||||| || ||| ||||||  ||||||||||||||| | ||||||||    
T  21574569 aacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttat 21574504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 21862175 - 21862228
Alignment:
Q  157 taacatgttcataagttgttttcagcttaactccataagctctccaaggtagct 210  Q
    |||||||| ||||||||||||||||||||  |||||||||||||| || |||||    
T  21862175 taacatgtccataagttgttttcagcttatttccataagctctcccagatagct 21862228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 36200175 - 36200110
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||| |||||| ||||||||||||||||||||  ||||| |||||| || | ||||||||    
T  36200175 aacaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 42745117 - 42745068
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagct 197  Q
    |||||||||| |||||||||||||||||||||| ||||  ||||||||||    
T  42745117 aacaacttatgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 45432936 - 45432981
Alignment:
Q  154 ttataacatgttcataagttgttttcagcttaactccataagctct 199  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctct 45432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 43115135 - 43115083
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctc 200  Q
    |||||||||| |||||| ||||| ||||||||||||||  |||||||||||||    
T  43115135 aacaacttatgacatgtccataacttgttttcagcttatttccataagctctc 43115083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 11039336 - 11039379
Alignment:
Q  154 ttataacatgttcataagttgttttcagcttaactccataagct 197  Q
    |||| |||||| |||||||||||||||||||| |||||||||||    
T  11039336 ttatgacatgtccataagttgttttcagcttatctccataagct 11039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 3044250 - 3044304
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||||||||| ||||||||||||| |||||||| ||||  | |||||||||||||    
T  3044250 aacaacttatgacatgttcataagctgttttcaacttattttcataagctctcca 3044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 25459541 - 25459599
Alignment:
Q  80 ttagggtgtgttaggattgactcatttggactcatcaactagcataagcacttgtgaga 138  Q
    ||||||| |||| ||||||| | |||||  || ||||||||||||||||||||||||||    
T  25459541 ttagggtctgtttggattgatttatttgagcttatcaactagcataagcacttgtgaga 25459599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 30573888 - 30573970
Alignment:
Q  131 ttgtgagaccttagaataacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||| ||||  | ||||| ||||  |||||||||||| |||||||||||||  | ||| ||||||||||| ||||||||    
T  30573888 ttgtgagaacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagcttat 30573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 33883752 - 33883806
Alignment:
Q  159 acatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||||||||||||  | |||||| |||| ||| ||||||||    
T  33883752 acatgttcataagttgttttcagcttattttcataagttctctaagatagcttat 33883806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 38319039 - 38318993
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataa 194  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  38319039 aacaacttataacatgttcataagctattttcagcttatttccataa 38318993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 50952412 - 50952346
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttatt 214  Q
    |||| ||||| ||||||||||||  |||||| ||||||  ||||||||||||||||| ||| |||||    
T  50952412 aacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttatt 50952346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 20267207 - 20267170
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  20267207 aacaacttataacatgttggtaagttgttttcagctta 20267170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 37825196 - 37825147
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    ||||| |||||| |||||||||||||||| |||  |||||||||||||||    
T  37825196 cttatgacatgtccataagttgttttcaggttatttccataagctctcca 37825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 41724291 - 41724254
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  41724291 aacaacttatgacatgtccataagttgttttcagctta 41724254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 24785279 - 24785219
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||| |||||||||||||||||||| ||||||  | ||||||||||| | | ||||||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttat 24785219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 43397901 - 43397853
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctcc 201  Q
    |||||||||||| ||||| ||||||||| ||||  ||||||||||||||    
T  43397901 cttataacatgtccataaattgttttcaacttacttccataagctctcc 43397853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 34652027 - 34652092
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||| |||||| |||||| |||||||| ||||  ||||||||||||||||| ||||||||    
T  34652027 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttat 34652092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 43199776 - 43199840
Alignment:
Q  149 acaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||| | ||||||| |||||||||||||||||||| | ||||||| ||||||| ||||||||    
T  43199776 acaacttgtgacatgtttataagttgttttcagcttaatttcataagccctccaagatagcttat 43199840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 35379021 - 35379072
Alignment:
Q  162 tgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  35379021 tgttcataagttgttttcagcttattttcataagctctccaagatagcttat 35379072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 41809236 - 41809299
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagctt 211  Q
    |||||||||| |||||||||||||||||||| ||||||  |||||||||| || ||| ||||||    
T  41809236 aacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 29316766 - 29316828
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagct 210  Q
    |||| ||||| ||||||||||||||| |||||||||||  |||||||| |||||||| |||||    
T  29316766 aacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagct 29316828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 40158797 - 40158743
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||| ||||| ||||||| |||||||||||||||||||| | |||||||||||||    
T  40158797 aacagcttatgacatgtttataagttgttttcagcttaattacataagctctcca 40158743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 1939320 - 1939377
Alignment:
Q  145 aataacaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    ||||||||||||| |||||| |||||| |||||||| ||||  |||||||||||||||    
T  1939320 aataacaacttatgacatgtccataagctgttttcaacttatttccataagctctcca 1939377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 16867812 - 16867755
Alignment:
Q  154 ttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagctt 211  Q
    |||| |||| ||||||||||||||||| ||||  ||||||||||||||||| ||||||    
T  16867812 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagctt 16867755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 43065422 - 43065495
Alignment:
Q  129 acttgtgagaccttagaataacaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||||||||| ||||  | |||||||||| |||||| ||||| ||||||||||||||  || ||||||||||||    
T  43065422 acttgtgagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctcca 43065495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 28677650 - 28677705
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaa 203  Q
    |||| ||||| |||| |||||||||||||||| |||||  ||||||||||||||||    
T  28677650 aacagcttatgacattttcataagttgttttcggcttatttccataagctctccaa 28677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 41817247 - 41817193
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||| ||||| ||||||| |||| ||||||||||||||  |||||||||||||||    
T  41817247 aacatcttatgacatgttgataatttgttttcagcttatttccataagctctcca 41817193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 43910993 - 43911027
Alignment:
Q  151 aacttataacatgttcataagttgttttcagctta 185  Q
    ||||||| |||||||||||||||||||||||||||    
T  43910993 aacttatgacatgttcataagttgttttcagctta 43911027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 7283075 - 7283022
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcc 201  Q
    |||||||||| | |||| ||||||||||||||| ||||  ||||||||||||||    
T  7283075 aacaacttatgatatgtccataagttgttttcatcttatatccataagctctcc 7283022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 12313176 - 12313229
Alignment:
Q  160 catgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||||||| ||||| ||||  | ||||||||||||||| ||||||||    
T  12313176 catgttcataagttgatttcaccttattttcataagctctccaagatagcttat 12313229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 30538164 - 30538201
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30538164 aacaacttatgacatgtccataagttgttttcagctta 30538201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 33525958 - 33525995
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  33525958 aacaacttataacatgtccataagttggtttcagctta 33525995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 38078413 - 38078466
Alignment:
Q  160 catgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||||||||||| |||| |  | ||||||||||||||| ||||||||    
T  38078413 catgttcataagttgttttgagctcatttacataagctctccaagatagcttat 38078466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 1056120 - 1056156
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctt 184  Q
    |||||||||| |||||||||| |||||||||||||||    
T  1056120 aacaacttatgacatgttcattagttgttttcagctt 1056156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 1647315 - 1647263
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctc 200  Q
    |||| ||||| ||||| ||||||| |||||||||||||  |||||||||||||    
T  1647315 aacagcttatgacatgctcataagctgttttcagcttatttccataagctctc 1647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 7782823 - 7782787
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctt 184  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  7782823 aacaacttataacattttcataagttgtgttcagctt 7782787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 19978026 - 19977994
Alignment:
Q  148 aacaacttataacatgttcataagttgttttca 180  Q
    |||||||||||||| ||||||||||||||||||    
T  19978026 aacaacttataacacgttcataagttgttttca 19977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 35329829 - 35329889
Alignment:
Q  168 taagttgttttcagcttaactccataagctctccaaggtagcttattgtgaacagcttata 228  Q
    |||||||||| |||||||  ||||||||||||||||| ||||||  |||  ||||||||||    
T  35329829 taagttgtttccagcttatttccataagctctccaagatagctttatgtagacagcttata 35329889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 44443387 - 44443335
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||||||||||  | |||| |||||| ||| ||||||||    
T  44443387 atgttcataagttgttttcagcttattttcatatgctctcaaagatagcttat 44443335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 9423585 - 9423651
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttatt 214  Q
    ||||| |||| |||||||||||||||||||||||||||  || | |||||||||| | |||||||||    
T  9423585 aacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttatt 9423651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 7244759 - 7244694
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||| |||| ||||| |||||||||||||||||||||  | ||||||||||||||  ||||||||    
T  7244759 aacaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttat 7244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 39281043 - 39280983
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||| |||| ||||||||||||||||||||  |||||| | |||||||| ||||||||    
T  39281043 cttataatatgtccataagttgttttcagcttatttccatatgttctccaagatagcttat 39280983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 39360102 - 39360011
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgtgaacagcttatatgaaaacagttt 240  Q
    |||||||||| |||| | ||||||||| ||||||||||  || |||||||| ||| | |||||| |||  |||| ||||||||||||||||||    
T  39360102 aacaacttatgacatatccataagttgctttcagcttatttcaataagctcgccaggatagctt-ttgaaaacatcttatatgaaaacagttt 39360011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 35267436 - 35267385
Alignment:
Q  153 cttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    ||||| ||||||||||| |||||||||||||||  || ||||||||||||||    
T  35267436 cttatgacatgttcataggttgttttcagcttatttctataagctctccaag 35267385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 24363603 - 24363657
Alignment:
Q  159 acatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||| ||||||||||||||||||||  ||||||| ||||||| | ||||||||    
T  24363603 acatgtccataagttgttttcagcttatttccataacctctccaggatagcttat 24363657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 39345544 - 39345459
Alignment:
Q  154 ttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgtgaacagcttatatgaaaacagttt 240  Q
    |||| |||||| ||||||||| ||||||||||  |||||||| ||  || | |||||| |||  |||||||||||||||||||||||    
T  39345544 ttatgacatgtccataagttgctttcagcttatttccataaggtcgtcaggatagctt-ttgaaaacagcttatatgaaaacagttt 39345459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 46082115 - 46082061
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||||||||| |||||  ||||||||||||||||||||  | |||||||||||||    
T  46082115 aacaacttatgacatgaccataagttgttttcagcttattttcataagctctcca 46082061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 11048106 - 11048069
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  11048106 aacaacttatgacatgttcataagctgttttcagctta 11048069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 20888385 - 20888422
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctta 185  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  20888385 aacaacttatgccatgttcataagttgttttcagctta 20888422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 35007599 - 35007554
Alignment:
Q  221 agcttatatgaaaacagttt-attttatctttagttatagaaatag 265  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||    
T  35007599 agcttacatgaaaacaattttattttatctttagttatagaaatag 35007554  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 43250690 - 43250755
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||| |||||||| |||||||||||||| |||  | ||||||||||||||  ||||||||    
T  43250690 aacagcttatgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatagcttat 43250755  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 12234880 - 12234932
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctc 200  Q
    |||||||||| ||||||  ||||| |||||||||||||  |||||||||||||    
T  12234880 aacaacttatgacatgtctataagctgttttcagcttatttccataagctctc 12234932  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 22551396 - 22551452
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    |||| ||||| ||||||||| | |||||||||||||||  | |||||||||||||||    
T  22551396 aacagcttatgacatgttcaaatgttgttttcagcttatttacataagctctccaag 22551452  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 25670577 - 25670633
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    |||||||||| ||||||| |||| ||||||||||||||  | || ||||||||||||    
T  25670577 aacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaag 25670633  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 36537987 - 36537951
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagctt 184  Q
    |||||||||| |||||||||||||||||||| |||||    
T  36537987 aacaacttatgacatgttcataagttgtttttagctt 36537951  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 39334272 - 39334181
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttattgtgaacagcttatatgaaaacagttt 240  Q
    ||||| |||| |||||| |||||||||  |||||||||  ||||||||||| ||| | |||||| |||  ||||||||||||| |||| ||||    
T  39334272 aacaatttatgacatgtccataagttgcattcagcttatttccataagctcgccaggatagctt-ttgaaaacagcttatatggaaaccgttt 39334181  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 53673649 - 53673714
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||| ||| | |||| ||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  53673649 aacaacatatcatatgtccataagttgttttcagcttatttacataagctctccaagatagcttat 53673714  T

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Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 1137791 - 1137739
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctc 200  Q
    |||| ||||| ||||||||||||||||||||||| |||  |||||||||||||    
T  1137791 aacatcttatgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 17884045 - 17884001
Alignment:
Q  238 tttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||    
T  17884045 tttattttatcttttgttatagaaatagcttacacatgagcactt 17884001  T

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Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 21593104 - 21593148
Alignment:
Q  238 tttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    |||||||||||||||||||||||||||||||| | || |||||||    
T  21593104 tttattttatctttagttatagaaatagtttatacataagcactt 21593148  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 7694012 - 7694055
Alignment:
Q  159 acatgttcataagttgttttcagcttaactccataagctctcca 202  Q
    |||||||||||||||||||||||||||  ||||||| |||||||    
T  7694012 acatgttcataagttgttttcagcttatttccataaactctcca 7694055  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 5131254 - 5131304
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagctt 211  Q
    |||| ||||||||||||||||||||  ||||||||||||||| | ||||||    
T  5131254 atgtccataagttgttttcagcttatttccataagctctccaggatagctt 5131304  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 28141572 - 28141530
Alignment:
Q  223 cttatatgaaaacagtttattttatctttagttatagaaatag 265  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  28141572 cttatatgaaaacagtttaacttatcttttgttatagaaatag 28141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 43824350 - 43824308
Alignment:
Q  160 catgttcataagttgttttcagcttaactccataagctctcca 202  Q
    ||||||||||||||||||||||||||  |||||||||| ||||    
T  43824350 catgttcataagttgttttcagcttatttccataagctttcca 43824308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 2592320 - 2592365
Alignment:
Q  168 taagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||||||||||  ||||||||||||||||  ||||||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 14011293 - 14011248
Alignment:
Q  168 taagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| |||||||||||||  ||||||||||||||||| ||||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttat 14011248  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 23819168 - 23819103
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||| |||||| ||||||||||||||| ||||  || ||||||||| |||| ||||||||    
T  23819168 aacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttat 23819103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 29263449 - 29263384
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||| ||||| | |||||||||||||||||||||||||  |||| ||||||| || | ||||||||    
T  29263449 aacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttat 29263384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 35406013 - 35405972
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctcca 202  Q
    ||||||||||| |||||||||||||  |||||||||||||||    
T  35406013 atgttcataagctgttttcagcttacttccataagctctcca 35405972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 56186892 - 56186945
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctcc 201  Q
    ||||||||||||||| |||||||||||| || | ||||  ||||||||||||||    
T  56186892 aacaacttataacatattcataagttgtattaaacttatttccataagctctcc 56186945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 1312920 - 1312864
Alignment:
Q  148 aacaacttataacatgttcataagttgttttcagcttaactccataagctctccaag 204  Q
    |||||||||| |||| |||||||  |||||||||||||  ||||||| |||||||||    
T  1312920 aacaacttattacatattcataaactgttttcagcttatttccataaactctccaag 1312864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 17884134 - 17884082
Alignment:
Q  161 atgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    ||||||||||||||||||||||| |  | ||||||||||||||  ||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttat 17884082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 18628555 - 18628599
Alignment:
Q  169 aagttgttttcagcttaactccataagctctccaaggtagcttat 213  Q
    |||||||||||||||||  ||||||||||||||||| || |||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttat 18628599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 24929560 - 24929520
Alignment:
Q  160 catgttcataagttgttttcagcttaactccataagctctc 200  Q
    ||||||||||| ||||||||||||||  |||||||||||||    
T  24929560 catgttcataaattgttttcagcttatttccataagctctc 24929520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 30631540 - 30631508
Alignment:
Q  153 cttataacatgttcataagttgttttcagctta 185  Q
    ||||||||||||||||||||||| |||||||||    
T  30631540 cttataacatgttcataagttgtgttcagctta 30631508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 39438629 - 39438673
Alignment:
Q  238 tttattttatctttagttatagaaatagtttacatatgagcactt 282  Q
    |||||||||||||  ||||||||||||| ||||| ||||||||||    
T  39438629 tttattttatcttatgttatagaaatagcttacacatgagcactt 39438673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 46401342 - 46401306
Alignment:
Q  149 acaacttataacatgttcataagttgttttcagctta 185  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  46401342 acaacttatgacatgttcataagttgtattcagctta 46401306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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