View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10110_low_21 (Length: 252)
Name: NF10110_low_21
Description: NF10110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10110_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 40470834 - 40470599
Alignment:
| Q |
1 |
agttcaaccatgattcggatgtttcattgattcaatcccttttctgagtttttattttaaatcattggttatttgtgacatgatttcttccgcattaagt |
100 |
Q |
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| T |
40470834 |
agttcaaccatgattcggatgtttcattgattcaatctcttgtctgagtttttattttaaatcattggttatttgtgacataatttcttccacattaagt |
40470735 |
T |
|
| Q |
101 |
caattaagtttgtgcattgtccatacagtaacatattagtaattataatttttgaggtaactaactaatttgtcatgataaatttttaattaaaggataa |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40470734 |
caattaagtttgtgcattgtctatacagtaacatattagtaattataatttttgaggtaactaactaatttgtcatgataaatttttaattaaaggataa |
40470635 |
T |
|
| Q |
201 |
cttatgttaaaagtttctcattctttaggaaaaatg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
40470634 |
cttatgttaaaagtttctcattctttaggaaaaatg |
40470599 |
T |
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