View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10110_low_7 (Length: 428)
Name: NF10110_low_7
Description: NF10110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10110_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 35 - 415
Target Start/End: Original strand, 25120720 - 25121104
Alignment:
| Q |
35 |
ttcaacaatctttaacattaatataaacccttaaa-gaaatgctacatataaaaattactatctctgaattacaaataaacttcttgaaataattatcat |
133 |
Q |
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| T |
25120720 |
ttcaacaatctttaacattaatataaacccttacacgaaatgctgcatataaacattac-atccctgaattatagaaaaa-ttcttgacataattatcat |
25120817 |
T |
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| Q |
134 |
gacaaatgtaagaagctaaaagtcctgtaattctagcacttcttgtttccatttcttggacgatgga----tattgacaactttgccaaccctacaa-gt |
228 |
Q |
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||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||||| |||||| |||||||||||||||||| || |
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| T |
25120818 |
aacaaatgtaagaagctaaaagtcctgtaaatgtagcacttcttgtttccattttttggatgatggacatctattgatgactttgccaaccctacaaagt |
25120917 |
T |
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| Q |
229 |
gttgttgctgcacaaaaaacaagcattaccaacacaaaaaccaagcatcattcctattttaatctcaaaagttgagattcattctgagtctataccaccc |
328 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
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| T |
25120918 |
gttgttgctgcacaaaaaacaagcattcccaacacaaaaaccaagcatcattcctattttgatctcaaaagttgaggttcattctgagtctataccaccc |
25121017 |
T |
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| Q |
329 |
tctcttgcaagcacccacaaacatccatccatttctcacaataaattttttactttcaaaccttctcatattatgtacctccctttg |
415 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25121018 |
tctcttgcaagcacccacaaacatccatccacttctcacaataaattttttactttcaaaccttctcatattatgtacctccctttg |
25121104 |
T |
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