View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10111_low_21 (Length: 311)

Name: NF10111_low_21
Description: NF10111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10111_low_21
NF10111_low_21
[»] chr2 (44 HSPs)
chr2 (8-311)||(22758481-22758782)
chr2 (8-311)||(23038085-23038388)
chr2 (8-311)||(22740726-22741027)
chr2 (70-311)||(22798892-22799132)
chr2 (95-311)||(40621974-40622188)
chr2 (70-311)||(23019472-23019712)
chr2 (15-311)||(24673630-24673929)
chr2 (70-220)||(23103253-23103403)
chr2 (104-311)||(21918082-21918288)
chr2 (176-311)||(45677921-45678056)
chr2 (77-311)||(25963483-25963715)
chr2 (179-311)||(37524885-37525017)
chr2 (215-310)||(23100997-23101092)
chr2 (250-311)||(18855228-18855289)
chr2 (97-281)||(22811708-22811891)
chr2 (250-311)||(22460957-22461018)
chr2 (77-311)||(19688523-19688755)
chr2 (173-311)||(24716297-24716435)
chr2 (251-311)||(15477883-15477943)
chr2 (251-311)||(19928269-19928329)
chr2 (251-311)||(24628245-24628305)
chr2 (240-311)||(24735671-24735742)
chr2 (250-311)||(23187353-23187414)
chr2 (250-311)||(23598616-23598677)
chr2 (251-311)||(61094-61154)
chr2 (251-311)||(12901279-12901339)
chr2 (251-311)||(21327333-21327393)
chr2 (254-306)||(24175093-24175145)
chr2 (251-311)||(24649636-24649696)
chr2 (254-306)||(24655110-24655162)
chr2 (254-306)||(24870173-24870225)
chr2 (254-306)||(25961306-25961358)
chr2 (251-311)||(27379199-27379259)
chr2 (251-311)||(27383245-27383305)
chr2 (251-311)||(27602076-27602136)
chr2 (243-311)||(44370065-44370133)
chr2 (22-122)||(45678074-45678178)
chr2 (253-311)||(26125484-26125542)
chr2 (253-311)||(41667230-41667288)
chr2 (251-311)||(21318402-21318462)
chr2 (95-306)||(40428599-40428810)
chr2 (251-307)||(41530780-41530836)
chr2 (261-311)||(24503399-24503449)
chr2 (115-171)||(32451834-32451891)
[»] scaffold0004 (3 HSPs)
scaffold0004 (8-311)||(69848-70149)
scaffold0004 (249-311)||(10351-10413)
scaffold0004 (259-311)||(58185-58237)
[»] chr1 (39 HSPs)
chr1 (8-311)||(21714600-21714903)
chr1 (10-311)||(42864977-42865274)
chr1 (8-304)||(20091246-20091539)
chr1 (70-311)||(21787808-21788048)
chr1 (14-311)||(6151908-6152208)
chr1 (17-311)||(22831144-22831440)
chr1 (77-311)||(18181887-18182120)
chr1 (8-311)||(21022685-21022991)
chr1 (77-306)||(22449037-22449265)
chr1 (181-311)||(22468462-22468592)
chr1 (111-261)||(48603669-48603820)
chr1 (179-311)||(3472692-3472824)
chr1 (88-311)||(16080211-16080432)
chr1 (240-311)||(33797801-33797872)
chr1 (249-311)||(17678354-17678416)
chr1 (249-311)||(36819075-36819137)
chr1 (250-311)||(12647147-12647208)
chr1 (250-307)||(45310137-45310194)
chr1 (240-311)||(21305582-21305653)
chr1 (250-309)||(46975745-46975804)
chr1 (250-311)||(8761399-8761460)
chr1 (251-311)||(23819066-23819126)
chr1 (250-306)||(45489515-45489571)
chr1 (240-311)||(19212135-19212206)
chr1 (253-311)||(21615718-21615776)
chr1 (250-311)||(18882645-18882706)
chr1 (249-306)||(24782872-24782929)
chr1 (251-311)||(16375224-16375284)
chr1 (251-311)||(20228576-20228636)
chr1 (251-311)||(21407635-21407695)
chr1 (251-311)||(52639821-52639881)
chr1 (253-309)||(20138364-20138420)
chr1 (250-307)||(18393734-18393791)
chr1 (259-311)||(21438081-21438133)
chr1 (80-140)||(22532394-22532453)
chr1 (259-311)||(23763498-23763550)
chr1 (254-302)||(33049863-33049911)
chr1 (70-140)||(50210150-50210219)
chr1 (267-307)||(21162078-21162118)
[»] scaffold0031 (2 HSPs)
scaffold0031 (8-311)||(65559-65861)
scaffold0031 (77-311)||(53672-53904)
[»] scaffold0261 (1 HSPs)
scaffold0261 (10-311)||(1395-1693)
[»] scaffold0297 (1 HSPs)
scaffold0297 (15-311)||(15435-15731)
[»] scaffold0101 (1 HSPs)
scaffold0101 (8-311)||(8723-9026)
[»] chr6 (53 HSPs)
chr6 (8-311)||(19863032-19863333)
chr6 (8-311)||(19873174-19873475)
chr6 (8-311)||(25641949-25642250)
chr6 (8-311)||(22438853-22439155)
chr6 (8-311)||(22432303-22432605)
chr6 (19-304)||(22334664-22334948)
chr6 (8-304)||(15894202-15894501)
chr6 (14-311)||(21739788-21740088)
chr6 (77-302)||(18907228-18907452)
chr6 (180-307)||(16924649-16924776)
chr6 (173-310)||(16523170-16523307)
chr6 (147-311)||(21834656-21834820)
chr6 (180-311)||(31164613-31164744)
chr6 (180-309)||(15041318-15041447)
chr6 (188-311)||(16965076-16965199)
chr6 (77-311)||(17804304-17804536)
chr6 (180-307)||(16929364-16929487)
chr6 (249-311)||(22429797-22429859)
chr6 (250-311)||(16741484-16741545)
chr6 (76-311)||(22863052-22863285)
chr6 (250-311)||(5616581-5616642)
chr6 (250-311)||(12496586-12496647)
chr6 (250-311)||(12706966-12707027)
chr6 (250-311)||(14472548-14472609)
chr6 (254-311)||(22592571-22592628)
chr6 (250-307)||(23657191-23657248)
chr6 (251-311)||(1587498-1587558)
chr6 (240-311)||(27415709-27415780)
chr6 (251-306)||(27567381-27567436)
chr6 (249-311)||(18180780-18180842)
chr6 (253-311)||(21702568-21702626)
chr6 (250-311)||(1644983-1645044)
chr6 (250-311)||(19663046-19663107)
chr6 (258-311)||(25135439-25135492)
chr6 (251-311)||(8244140-8244200)
chr6 (251-311)||(9482060-9482120)
chr6 (251-311)||(11567142-11567202)
chr6 (251-311)||(19870870-19870930)
chr6 (250-306)||(20907753-20907809)
chr6 (243-311)||(22059509-22059577)
chr6 (251-311)||(23395348-23395408)
chr6 (254-311)||(20803320-20803377)
chr6 (250-299)||(27553386-27553435)
chr6 (251-311)||(12618611-12618671)
chr6 (254-306)||(19790551-19790603)
chr6 (251-311)||(23990200-23990260)
chr6 (264-311)||(18955530-18955577)
chr6 (77-311)||(25766935-25767167)
chr6 (111-156)||(18821766-18821812)
chr6 (251-311)||(18917033-18917093)
chr6 (70-140)||(18409764-18409833)
chr6 (70-140)||(25629292-25629361)
chr6 (259-309)||(34369742-34369792)
[»] scaffold0139 (1 HSPs)
scaffold0139 (8-308)||(20034-20333)
[»] scaffold0131 (1 HSPs)
scaffold0131 (8-311)||(36508-36811)
[»] chr8 (47 HSPs)
chr8 (8-311)||(17353703-17354006)
chr8 (8-311)||(19899149-19899448)
chr8 (8-306)||(19983147-19983441)
chr8 (8-311)||(21168487-21168794)
chr8 (8-311)||(24755768-24756074)
chr8 (8-311)||(16184774-16185081)
chr8 (8-297)||(21161838-21162121)
chr8 (70-311)||(23776600-23776841)
chr8 (15-311)||(377332-377631)
chr8 (77-311)||(20465805-20466038)
chr8 (149-311)||(21395748-21395910)
chr8 (149-311)||(21790241-21790403)
chr8 (160-306)||(19976647-19976793)
chr8 (167-311)||(21389218-21389362)
chr8 (77-311)||(30643057-30643291)
chr8 (147-311)||(15602783-15602947)
chr8 (147-311)||(15611235-15611399)
chr8 (8-311)||(19259367-19259654)
chr8 (77-311)||(17926473-17926705)
chr8 (165-311)||(16410021-16410167)
chr8 (243-311)||(22010445-22010513)
chr8 (250-311)||(15538726-15538787)
chr8 (250-311)||(17828350-17828411)
chr8 (250-311)||(20856191-20856252)
chr8 (250-311)||(24434004-24434065)
chr8 (240-311)||(16231242-16231313)
chr8 (240-311)||(23834441-23834512)
chr8 (250-311)||(15532166-15532227)
chr8 (249-310)||(16861094-16861155)
chr8 (250-311)||(30308521-30308582)
chr8 (251-311)||(22113495-22113555)
chr8 (251-311)||(22134998-22135058)
chr8 (251-311)||(23846782-23846842)
chr8 (250-306)||(39094713-39094769)
chr8 (240-311)||(22028825-22028896)
chr8 (250-311)||(18619756-18619817)
chr8 (251-311)||(22166148-22166208)
chr8 (251-311)||(43252092-43252152)
chr8 (253-311)||(17055156-17055214)
chr8 (253-311)||(32598959-32599017)
chr8 (253-311)||(32605491-32605549)
chr8 (251-311)||(19278051-19278110)
chr8 (252-311)||(22045138-22045197)
chr8 (259-311)||(20527736-20527788)
chr8 (251-307)||(21972355-21972411)
chr8 (251-307)||(21976440-21976496)
chr8 (70-140)||(16092279-16092348)
[»] chr7 (54 HSPs)
chr7 (8-311)||(9703317-9703620)
chr7 (10-311)||(18154602-18154902)
chr7 (8-311)||(19649250-19649552)
chr7 (49-311)||(24054560-24054822)
chr7 (95-311)||(17137829-17138043)
chr7 (95-311)||(12321508-12321723)
chr7 (173-311)||(11880468-11880606)
chr7 (77-311)||(14429999-14430232)
chr7 (95-311)||(12187153-12187367)
chr7 (77-311)||(11312755-11312987)
chr7 (240-311)||(10508848-10508919)
chr7 (77-311)||(13635236-13635468)
chr7 (77-311)||(15605039-15605271)
chr7 (249-311)||(11987489-11987551)
chr7 (249-311)||(48593223-48593285)
chr7 (250-311)||(6801490-6801551)
chr7 (240-311)||(18825-18896)
chr7 (249-311)||(9593622-9593684)
chr7 (249-311)||(9644585-9644647)
chr7 (250-311)||(16438801-16438862)
chr7 (250-311)||(16724398-16724459)
chr7 (250-311)||(17701412-17701473)
chr7 (250-311)||(18557249-18557310)
chr7 (243-311)||(2760413-2760481)
chr7 (251-311)||(13149433-13149493)
chr7 (251-311)||(15728603-15728663)
chr7 (249-311)||(12318404-12318466)
chr7 (250-311)||(13462039-13462100)
chr7 (250-311)||(14217192-14217253)
chr7 (249-306)||(15580968-15581025)
chr7 (250-311)||(26292673-26292734)
chr7 (254-306)||(9445930-9445982)
chr7 (251-311)||(12718948-12719008)
chr7 (251-311)||(12723859-12723919)
chr7 (251-311)||(16114521-16114581)
chr7 (251-311)||(16117674-16117734)
chr7 (251-311)||(16906967-16907027)
chr7 (251-311)||(18279683-18279743)
chr7 (251-311)||(18283646-18283706)
chr7 (250-311)||(8917704-8917765)
chr7 (251-311)||(12715144-12715204)
chr7 (259-311)||(14959450-14959502)
chr7 (254-306)||(20569368-20569420)
chr7 (264-311)||(35151897-35151944)
chr7 (95-217)||(3271958-3272079)
chr7 (253-311)||(16275772-16275830)
chr7 (76-196)||(12318233-12318351)
chr7 (259-311)||(11262615-11262667)
chr7 (259-311)||(11548034-11548086)
chr7 (259-311)||(11554630-11554682)
chr7 (259-311)||(12692782-12692834)
chr7 (259-311)||(14953484-14953536)
chr7 (264-304)||(18302489-18302529)
chr7 (259-311)||(25038977-25039029)
[»] scaffold0043 (2 HSPs)
scaffold0043 (8-311)||(18290-18593)
scaffold0043 (251-311)||(76938-76998)
[»] chr4 (48 HSPs)
chr4 (8-311)||(13569556-13569865)
chr4 (8-311)||(23843532-23843831)
chr4 (11-311)||(44675689-44675985)
chr4 (8-311)||(12570068-12570374)
chr4 (76-311)||(15093892-15094126)
chr4 (100-311)||(15124920-15125130)
chr4 (95-311)||(15121569-15121783)
chr4 (77-311)||(16487844-16488077)
chr4 (147-311)||(16356719-16356883)
chr4 (77-311)||(36133729-36133961)
chr4 (150-276)||(16348466-16348592)
chr4 (250-311)||(15353073-15353134)
chr4 (252-311)||(19757368-19757427)
chr4 (252-311)||(19782379-19782438)
chr4 (240-311)||(43255928-43255999)
chr4 (249-311)||(1951528-1951590)
chr4 (250-311)||(17152254-17152315)
chr4 (250-311)||(18237170-18237231)
chr4 (250-311)||(23139548-23139609)
chr4 (250-311)||(26243432-26243493)
chr4 (250-311)||(45938425-45938486)
chr4 (251-311)||(9556809-9556869)
chr4 (250-306)||(11250333-11250389)
chr4 (251-311)||(28569211-28569271)
chr4 (252-311)||(16678356-16678415)
chr4 (254-311)||(3413078-3413135)
chr4 (258-311)||(16243167-16243220)
chr4 (250-311)||(27534303-27534364)
chr4 (251-311)||(4561100-4561160)
chr4 (251-311)||(5756704-5756764)
chr4 (254-306)||(16351620-16351672)
chr4 (251-311)||(18222145-18222205)
chr4 (251-311)||(33742657-33742717)
chr4 (251-311)||(2015057-2015117)
chr4 (267-311)||(14708401-14708445)
chr4 (254-310)||(18602513-18602569)
chr4 (254-306)||(25555798-25555850)
chr4 (70-244)||(14038763-14038937)
chr4 (253-311)||(42997217-42997275)
chr4 (250-311)||(9530711-9530772)
chr4 (259-311)||(14679249-14679301)
chr4 (259-311)||(14685458-14685510)
chr4 (259-311)||(23838720-23838772)
chr4 (264-311)||(18609106-18609153)
chr4 (259-310)||(41385513-41385564)
chr4 (111-156)||(6190617-6190663)
chr4 (70-135)||(16377465-16377529)
chr4 (264-304)||(22633983-22634023)
[»] chr3 (61 HSPs)
chr3 (10-310)||(23408484-23408784)
chr3 (8-278)||(17524951-17525221)
chr3 (8-311)||(14878271-14878579)
chr3 (8-311)||(15060338-15060644)
chr3 (10-310)||(23077245-23077538)
chr3 (8-311)||(23052843-23053150)
chr3 (8-311)||(15051562-15051868)
chr3 (178-311)||(15877594-15877727)
chr3 (8-311)||(16909796-16910102)
chr3 (8-311)||(16369454-16369760)
chr3 (8-177)||(15877947-15878114)
chr3 (111-311)||(856288-856488)
chr3 (77-311)||(322708-322941)
chr3 (77-311)||(18383683-18383916)
chr3 (77-311)||(12496375-12496607)
chr3 (77-309)||(19725680-19725911)
chr3 (78-311)||(11862911-11863143)
chr3 (165-311)||(11298295-11298441)
chr3 (202-311)||(12173029-12173138)
chr3 (77-311)||(326931-327163)
chr3 (78-311)||(11851699-11851925)
chr3 (77-311)||(20461267-20461499)
chr3 (243-311)||(26190775-26190843)
chr3 (240-311)||(15482930-15483001)
chr3 (249-311)||(15849852-15849914)
chr3 (249-311)||(16797821-16797883)
chr3 (249-311)||(16808648-16808710)
chr3 (250-311)||(1598247-1598308)
chr3 (16-162)||(12172858-12173007)
chr3 (250-311)||(15941671-15941732)
chr3 (250-311)||(17242250-17242311)
chr3 (250-311)||(38814662-38814723)
chr3 (243-311)||(12037719-12037787)
chr3 (252-311)||(1982577-1982636)
chr3 (240-311)||(7793113-7793184)
chr3 (254-306)||(11557156-11557208)
chr3 (250-306)||(11594911-11594967)
chr3 (251-311)||(16697071-16697131)
chr3 (250-306)||(42326222-42326278)
chr3 (111-213)||(14179587-14179690)
chr3 (249-311)||(31097321-31097383)
chr3 (250-311)||(3833952-3834013)
chr3 (250-311)||(11300278-11300339)
chr3 (251-311)||(7109981-7110041)
chr3 (251-311)||(7113916-7113976)
chr3 (251-311)||(16690498-16690558)
chr3 (251-311)||(22337002-22337062)
chr3 (251-311)||(27409410-27409470)
chr3 (251-311)||(28950007-28950067)
chr3 (249-311)||(2897590-2897652)
chr3 (256-306)||(3402727-3402777)
chr3 (251-311)||(11855015-11855075)
chr3 (251-311)||(15617656-15617716)
chr3 (259-311)||(20723288-20723340)
chr3 (251-311)||(22321947-22322007)
chr3 (83-244)||(14972982-14973143)
chr3 (259-311)||(24188064-24188116)
chr3 (70-162)||(42386525-42386618)
chr3 (250-308)||(55149256-55149314)
chr3 (279-311)||(16862947-16862979)
chr3 (111-170)||(18438689-18438749)
[»] chr5 (54 HSPs)
chr5 (8-307)||(23201414-23201718)
chr5 (70-311)||(37724016-37724257)
chr5 (8-311)||(14079203-14079501)
chr5 (8-310)||(23501112-23501418)
chr5 (8-311)||(26704129-26704419)
chr5 (8-311)||(26973862-26974152)
chr5 (8-311)||(23512152-23512460)
chr5 (93-304)||(21873385-21873595)
chr5 (95-311)||(22032455-22032669)
chr5 (95-311)||(18769770-18769984)
chr5 (77-311)||(21366432-21366665)
chr5 (95-311)||(23572218-23572432)
chr5 (147-311)||(20805736-20805900)
chr5 (240-311)||(17410715-17410786)
chr5 (240-311)||(18356595-18356666)
chr5 (240-311)||(20910567-20910638)
chr5 (250-311)||(17918918-17918979)
chr5 (250-311)||(20232828-20232889)
chr5 (250-311)||(21340534-21340595)
chr5 (250-311)||(24532815-24532876)
chr5 (250-311)||(26665898-26665959)
chr5 (250-311)||(26937495-26937556)
chr5 (250-310)||(16674430-16674490)
chr5 (147-311)||(23451532-23451696)
chr5 (147-311)||(23463037-23463201)
chr5 (249-309)||(23535358-23535418)
chr5 (250-311)||(42805698-42805759)
chr5 (250-306)||(12028337-12028393)
chr5 (251-311)||(21884956-21885016)
chr5 (147-311)||(23458776-23458940)
chr5 (251-311)||(25229173-25229233)
chr5 (251-311)||(25293329-25293389)
chr5 (251-311)||(26172743-26172803)
chr5 (249-308)||(1858746-1858805)
chr5 (250-307)||(123076-123133)
chr5 (254-311)||(17718206-17718263)
chr5 (250-311)||(18774482-18774543)
chr5 (258-311)||(21887124-21887177)
chr5 (250-311)||(26742513-26742574)
chr5 (251-311)||(19472486-19472546)
chr5 (251-311)||(20296127-20296187)
chr5 (254-306)||(24222170-24222222)
chr5 (250-306)||(26680868-26680924)
chr5 (250-306)||(26952475-26952531)
chr5 (254-304)||(31342399-31342449)
chr5 (251-311)||(4036499-4036559)
chr5 (266-311)||(18784341-18784386)
chr5 (259-311)||(21295030-21295082)
chr5 (250-294)||(22757414-22757458)
chr5 (259-311)||(25535275-25535327)
chr5 (83-135)||(1096595-1096646)
chr5 (259-311)||(15441721-15441773)
chr5 (268-304)||(21565858-21565894)
chr5 (111-170)||(24529375-24529435)
[»] scaffold0174 (1 HSPs)
scaffold0174 (8-311)||(18219-18517)
[»] scaffold0081 (3 HSPs)
scaffold0081 (8-311)||(14718-15025)
scaffold0081 (8-311)||(23733-24040)
scaffold0081 (8-311)||(39157-39464)
[»] scaffold0671 (1 HSPs)
scaffold0671 (8-311)||(6149-6456)
[»] scaffold0149 (2 HSPs)
scaffold0149 (8-310)||(3796-4093)
scaffold0149 (8-310)||(8227-8524)
[»] scaffold0555 (1 HSPs)
scaffold0555 (11-304)||(637-928)
[»] scaffold0042 (4 HSPs)
scaffold0042 (8-311)||(34676-34982)
scaffold0042 (219-311)||(41319-41411)
scaffold0042 (250-311)||(64131-64192)
scaffold0042 (250-311)||(76015-76076)
[»] scaffold0021 (1 HSPs)
scaffold0021 (70-311)||(174879-175120)
[»] scaffold0111 (2 HSPs)
scaffold0111 (12-311)||(32493-32787)
scaffold0111 (251-311)||(8778-8838)
[»] scaffold0102 (1 HSPs)
scaffold0102 (74-311)||(48226-48464)
[»] scaffold0096 (1 HSPs)
scaffold0096 (70-311)||(16115-16355)
[»] scaffold0056 (2 HSPs)
scaffold0056 (8-311)||(13843-14149)
scaffold0056 (70-140)||(17152-17221)
[»] scaffold0311 (1 HSPs)
scaffold0311 (8-311)||(6844-7150)
[»] scaffold0220 (1 HSPs)
scaffold0220 (10-311)||(4699-5004)
[»] scaffold0198 (2 HSPs)
scaffold0198 (10-208)||(23899-24094)
scaffold0198 (264-311)||(26707-26754)
[»] scaffold0035 (1 HSPs)
scaffold0035 (77-311)||(46493-46726)
[»] scaffold1895 (1 HSPs)
scaffold1895 (70-271)||(1033-1233)
[»] scaffold0215 (1 HSPs)
scaffold0215 (95-311)||(26962-27176)
[»] scaffold0158 (2 HSPs)
scaffold0158 (15-311)||(2893-3192)
scaffold0158 (15-311)||(6559-6858)
[»] scaffold0023 (2 HSPs)
scaffold0023 (70-311)||(23433-23672)
scaffold0023 (70-271)||(38285-38485)
[»] scaffold0080 (1 HSPs)
scaffold0080 (77-311)||(18422-18655)
[»] scaffold0210 (2 HSPs)
scaffold0210 (95-311)||(21572-21786)
scaffold0210 (95-311)||(29464-29678)
[»] scaffold0037 (1 HSPs)
scaffold0037 (77-311)||(21335-21568)
[»] scaffold1124 (1 HSPs)
scaffold1124 (95-311)||(2015-2229)
[»] scaffold0324 (1 HSPs)
scaffold0324 (199-311)||(15642-15754)
[»] scaffold0425 (1 HSPs)
scaffold0425 (77-311)||(277-510)
[»] scaffold0393 (1 HSPs)
scaffold0393 (77-311)||(1610-1843)
[»] scaffold0761 (1 HSPs)
scaffold0761 (77-311)||(6075-6308)
[»] scaffold0114 (1 HSPs)
scaffold0114 (95-311)||(7429-7643)
[»] scaffold1296 (1 HSPs)
scaffold1296 (77-311)||(510-743)
[»] scaffold0412 (1 HSPs)
scaffold0412 (147-311)||(6182-6346)
[»] scaffold0615 (1 HSPs)
scaffold0615 (143-310)||(1851-2018)
[»] scaffold0029 (3 HSPs)
scaffold0029 (95-311)||(12897-13111)
scaffold0029 (251-311)||(61379-61439)
scaffold0029 (258-311)||(65295-65348)
[»] scaffold0346 (1 HSPs)
scaffold0346 (77-311)||(15203-15436)
[»] scaffold0676 (1 HSPs)
scaffold0676 (95-310)||(4565-4779)
[»] scaffold0367 (1 HSPs)
scaffold0367 (147-311)||(1082-1246)
[»] scaffold0280 (1 HSPs)
scaffold0280 (95-311)||(19058-19273)
[»] scaffold0104 (2 HSPs)
scaffold0104 (173-309)||(2041-2177)
scaffold0104 (173-309)||(9723-9859)
[»] scaffold0036 (1 HSPs)
scaffold0036 (77-311)||(66182-66414)
[»] scaffold0574 (1 HSPs)
scaffold0574 (12-129)||(7755-7876)
[»] scaffold0003 (4 HSPs)
scaffold0003 (250-311)||(139988-140049)
scaffold0003 (249-311)||(96883-96945)
scaffold0003 (240-311)||(71581-71652)
scaffold0003 (88-306)||(413822-414039)
[»] scaffold0483 (1 HSPs)
scaffold0483 (143-311)||(502-670)
[»] scaffold0228 (1 HSPs)
scaffold0228 (240-311)||(18399-18470)
[»] scaffold0168 (1 HSPs)
scaffold0168 (240-311)||(3297-3368)
[»] scaffold0093 (1 HSPs)
scaffold0093 (113-192)||(4690-4768)
[»] scaffold0044 (3 HSPs)
scaffold0044 (240-311)||(19456-19527)
scaffold0044 (240-311)||(13172-13243)
scaffold0044 (253-311)||(62541-62599)
[»] scaffold0009 (1 HSPs)
scaffold0009 (240-311)||(228140-228211)
[»] scaffold1326 (1 HSPs)
scaffold1326 (77-311)||(1256-1489)
[»] scaffold1220 (1 HSPs)
scaffold1220 (249-311)||(2079-2141)
[»] scaffold0109 (4 HSPs)
scaffold0109 (249-311)||(45395-45457)
scaffold0109 (251-311)||(38586-38646)
scaffold0109 (250-311)||(7222-7283)
scaffold0109 (251-311)||(11069-11129)
[»] scaffold1461 (1 HSPs)
scaffold1461 (250-311)||(207-268)
[»] scaffold0070 (1 HSPs)
scaffold0070 (250-311)||(10181-10242)
[»] scaffold0017 (3 HSPs)
scaffold0017 (251-311)||(56376-56436)
scaffold0017 (256-311)||(191047-191102)
scaffold0017 (249-311)||(192750-192812)
[»] scaffold0177 (1 HSPs)
scaffold0177 (240-311)||(13254-13325)
[»] scaffold0107 (1 HSPs)
scaffold0107 (240-311)||(15185-15256)
[»] scaffold0001 (2 HSPs)
scaffold0001 (240-311)||(173558-173629)
scaffold0001 (250-306)||(422303-422359)
[»] scaffold0327 (2 HSPs)
scaffold0327 (248-310)||(566-628)
scaffold0327 (70-162)||(3443-3536)
[»] scaffold0013 (2 HSPs)
scaffold0013 (249-311)||(2440-2502)
scaffold0013 (259-307)||(9627-9675)
[»] scaffold0008 (2 HSPs)
scaffold0008 (249-311)||(30511-30573)
scaffold0008 (253-311)||(2157-2215)
[»] scaffold0439 (2 HSPs)
scaffold0439 (250-311)||(2202-2263)
scaffold0439 (250-311)||(10062-10123)
[»] scaffold0410 (1 HSPs)
scaffold0410 (250-311)||(11658-11719)
[»] scaffold0184 (1 HSPs)
scaffold0184 (250-307)||(3995-4052)
[»] scaffold0171 (1 HSPs)
scaffold0171 (250-311)||(35277-35338)
[»] scaffold0132 (1 HSPs)
scaffold0132 (250-311)||(36583-36644)
[»] scaffold0130 (2 HSPs)
scaffold0130 (250-311)||(5767-5828)
scaffold0130 (70-140)||(27945-28014)
[»] scaffold0120 (2 HSPs)
scaffold0120 (250-311)||(19784-19845)
scaffold0120 (67-162)||(16225-16319)
[»] scaffold0012 (1 HSPs)
scaffold0012 (250-311)||(24735-24796)
[»] scaffold0010 (2 HSPs)
scaffold0010 (250-311)||(23494-23555)
scaffold0010 (259-311)||(242344-242396)
[»] scaffold0476 (2 HSPs)
scaffold0476 (95-311)||(5721-5935)
scaffold0476 (95-311)||(6916-7130)
[»] scaffold0193 (1 HSPs)
scaffold0193 (253-311)||(9701-9759)
[»] scaffold1552 (1 HSPs)
scaffold1552 (254-311)||(635-692)
[»] scaffold0124 (2 HSPs)
scaffold0124 (77-210)||(42739-42871)
scaffold0124 (264-304)||(24421-24461)
[»] scaffold0015 (1 HSPs)
scaffold0015 (250-311)||(192083-192144)
[»] scaffold0585 (1 HSPs)
scaffold0585 (251-311)||(9613-9673)
[»] scaffold0372 (1 HSPs)
scaffold0372 (251-311)||(4868-4928)
[»] scaffold0342 (1 HSPs)
scaffold0342 (250-306)||(7042-7098)
[»] scaffold0371 (1 HSPs)
scaffold0371 (253-311)||(15618-15676)
[»] scaffold0216 (1 HSPs)
scaffold0216 (249-307)||(16891-16949)
[»] scaffold0546 (2 HSPs)
scaffold0546 (250-311)||(6024-6085)
scaffold0546 (251-311)||(2178-2238)
[»] scaffold0637 (1 HSPs)
scaffold0637 (250-306)||(8849-8905)
[»] scaffold0141 (1 HSPs)
scaffold0141 (70-244)||(39591-39765)
[»] scaffold0049 (1 HSPs)
scaffold0049 (70-244)||(75047-75221)
[»] scaffold0028 (1 HSPs)
scaffold0028 (251-311)||(58485-58545)
[»] scaffold0034 (2 HSPs)
scaffold0034 (253-311)||(16430-16488)
scaffold0034 (111-171)||(51789-51850)
[»] scaffold0284 (1 HSPs)
scaffold0284 (251-311)||(18633-18693)
[»] scaffold0138 (1 HSPs)
scaffold0138 (259-311)||(29974-30026)
[»] scaffold0122 (2 HSPs)
scaffold0122 (83-162)||(25979-26058)
scaffold0122 (83-135)||(33437-33488)
[»] scaffold0908 (1 HSPs)
scaffold0908 (70-140)||(3123-3192)
[»] scaffold0540 (1 HSPs)
scaffold0540 (70-135)||(3093-3157)
[»] scaffold0334 (1 HSPs)
scaffold0334 (258-311)||(18127-18180)
[»] scaffold0292 (1 HSPs)
scaffold0292 (95-162)||(3610-3677)
[»] scaffold0259 (1 HSPs)
scaffold0259 (259-311)||(10464-10516)
[»] scaffold0233 (1 HSPs)
scaffold0233 (259-311)||(14307-14359)
[»] scaffold0192 (1 HSPs)
scaffold0192 (264-304)||(10221-10261)


Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 22758782 - 22758481
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| |||||||||| |||| |||||||||| ||||| |||| || ||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  22758782 agcatagacagattacaacaacagtatgacatcacataacaatattaa-taaaaacag-caacatctcaatcattcattcataattcaagtaatgcaatt 22758685  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22758684 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgcagttaatttcttatataggtctcattactacccaagggtccat 22758585  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22758584 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatctgctcgccatggcgagtaca 22758485  T
Q  308 agcc 311  Q
    ||||    
T  22758484 agcc 22758481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 23038085 - 23038388
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||    
T  23038085 agcataggcagattacaacaacagtatgacatcatataacgatatcaaataaaaacaagcaacatctcaatcattcattcataattcaagtaattcaatt 23038184  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || ||||||||||||||||||| |||| ||||||||||||| ||||||| |||||| || ||| ||||||||||||||||| ||||||||||||||||||    
T  23038185 aaacattatatcacatcatatttaacactaacatctcataagagcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccat 23038284  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  23038285 ctctaatcaaatcatgcgacacagatcgcaatttcctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgggtaca 23038384  T
Q  308 agcc 311  Q
    ||||    
T  23038385 agcc 23038388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 22741027 - 22740726
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| |||||||||| |||| |||||||||| ||||||||||||| ||||||||  || ||||| |||||||||||||||||| |||||||||||||    
T  22741027 agcatagacagattacaacaacagtatgacatcacataacgatatcaa-taaaaacaa-caacatcttaatcattcattcataattcaagtaatgcaatt 22740930  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  22740929 aatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcattactacccaagggtccat 22740830  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||| ||    
T  22740829 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagttca 22740730  T
Q  308 agcc 311  Q
    ||||    
T  22740729 agcc 22740726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 70 - 311
Target Start/End: Complemental strand, 22799132 - 22798892
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  |||||||| |||  ||| ||||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||    
T  22799132 catcttaatcattcaataatatcttaagtaaggcacataa-cattatatcacatcatattcaacattaacatttcataacagcttcacaaattgcagtta 22799034  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  22799033 acttcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgc 22798934  T
Q  270 tcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || |||||||||||||| ||||||||||||||||||||||||    
T  22798933 tcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22798892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 40622188 - 40621974
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||| ||||||  |||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  40622188 aagtaatgca--taaacattataatacatcataatcaacacaaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattacta 40622091  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  40622090 cccaagggtccatctctaaacaaaatatgcgaaacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 40621991  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  40621990 catggcgagtacaagcc 40621974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 70 - 311
Target Start/End: Complemental strand, 23019712 - 23019472
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  ||||||||||||  ||| | ||||||||||||||||||||||||||||| |||||| ||||||| | |||| |  ||    
T  23019712 catcttaatcattcaataatatcttaagtaatgcacataa-cgttatatcacatcatattcaacattaacatttcataaaagcttcacaaattgcaaata 23019614  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  23019613 acttcttatataggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgacttgcactcagttctggaagtgc 23019514  T
Q  270 tcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || |||||||||||||| | ||||||||||| ||||||||||    
T  23019513 tcgcgaggcgagagcatctactcgccatggcaagtacaagcc 23019472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 15 - 311
Target Start/End: Original strand, 24673630 - 24673929
Alignment:
Q  15 gcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaattaat 110  Q
    |||||| |||| |||| ||||||||||||||| ||||||||||| || || | |||| ||||||||||||||||| |    || ||||||||||||||||    
T  24673630 gcagatcacaataacattatgacatcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaat 24673729  T
Q  111 cattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctc 210  Q
    ||||| ||||||  ||| ||| | ||||||| |||||| ||||||| |||| | | ||||  || |||||||||| |||||||||  ||| ||||| | |    
T  24673730 cattaaatcacagtataatcagc-ttaacatttcataatagcttcacagatcgcaattaacatcctatataggtcacattactacttaagagtccaaccc 24673828  T
Q  211 taatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||||| |||||||||||||||||||| ||||| ||||||| |||||| || |||||||| |||||||||||||| ||||||||||||||| |||||||    
T  24673829 taatcaatttatgcgacacagatcgcaacatcctaacttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagc 24673928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 70 - 220
Target Start/End: Complemental strand, 23103403 - 23103253
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| || ||||| ||||||||||||||||||||| |||||| |||||    
T  23103403 catctcaatcattcattcataattcaagtcatgcaattaaacattatatcacatcaaatccaacactaacatctcataacagcttcacagattgcagtta 23103304  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaatt 220  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23103303 acttcttatataggtctcattactaccaaagggtccatctctaatcaaatt 23103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 104 - 311
Target Start/End: Complemental strand, 21918288 - 21918082
Alignment:
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||| | ||||||  ||||| |||||||| |||||  ||||||  ||||| ||||||| |||||||||| ||||||    
T  21918288 aattaatcattaaatcacattataatcagc-ttaacagttcatagcagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggt 21918190  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||| |  ||||||| |||||||| ||||||||||| ||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  21918189 ccaaccataatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 21918090  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  21918089 tacaagcc 21918082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 45678056 - 45677921
Alignment:
Q  176 tatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacga 275  Q
    |||||||||| |||||||||| ||| ||||||| |||||||| | |||||||||||||| ||| || |||| ||||||||||||||| ||||||||||||    
T  45678056 tatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcactcagttctggaagtgctcacga 45677957  T
Q  276 ggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45677956 ggcgagagcatctgctcgccatggcgagtacaagcc 45677921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 25963715 - 25963483
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||| |||||||||| ||||||| | |  |||| ||| ||  ||| |||||||||| |||||  | ||||  ||||    
T  25963715 atcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaac-ttagcagttca-aacagcttcacagatttcaattaacatctt 25963618  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| ||||| || ||||||||||| || || ||||||| ||| ||||| |||||||| ||||    
T  25963617 aaataggtcacattactacctaagggtccaaccctaatcaacttatgagaaacagatcgcaacatactaacttgcattcaattctggaagtgctcgcgag 25963518  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  25963517 gcgagagcatctgctcgccatggcgagtacaagcc 25963483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 179 - 311
Target Start/End: Original strand, 37524885 - 37525017
Alignment:
Q  179 ataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggc 278  Q
    ||||||| |||||||||| ||||||||| |  ||||||| ||||| || ||||||||||| || || ||||||| ||||||||| |||||||| ||||||    
T  37524885 ataggtcacattactacctaagggtccaaccttaatcaacttatgtgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggc 37524984  T
Q  279 gagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| ||||||||||||||||||||||||    
T  37524985 gagagcatctgctcgccatggcgagtacaagcc 37525017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 23101092 - 23100997
Alignment:
Q  215 caaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||||| |||||||    
T  23101092 caaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagc 23100997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 18855289 - 18855228
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18855289 gcactcagttctggaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 18855228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 281
Target Start/End: Complemental strand, 22811891 - 22811708
Alignment:
Q  97 gtaatgcaatt-aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactac 195  Q
    ||||||||||| |||||||| ||||||| ||| ||||| |||| |  ||||| |||||||| |||||  | ||||  ||||| ||||||| |||||||||    
T  22811891 gtaatgcaatttaatcattaaatcacattataatcaac-ttaatagttcatagcagcttcacagatttcacttaacatcttaaataggtcacattactac 22811793  T
Q  196 ccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgag 281  Q
    | || |||||| | |||||||| |||||  | ||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||    
T  22811792 ctaaaggtccaacactaatcaatttatgaaa-acagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggcgag 22811708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 22461018 - 22460957
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22461018 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22460957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 19688755 - 19688523
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  19688755 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctcagttaatatctt 19688658  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||  |  ||||||||   | || || ||| || ||| |||||||  |||||||||||||| |||||||| |||     
T  19688657 aaataggtctcattagtacctaaagttcatttcctaatcaatccaagcaactcaggtctcaaaatcctcaaatgcactcagttctggaagtgctcgcgat 19688558  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| |||| | |||||||||||||||||    
T  19688557 gcgagagcatctgcttgtcatggcgagtacaagcc 19688523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 311
Target Start/End: Complemental strand, 24716435 - 24716297
Alignment:
Q  173 tcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctca 272  Q
    ||||| |||||||||| ||||||| || | |||||  |||||||| | | || || ||| || ||| || |||| |||||||| | |||  ||||||||     
T  24716435 tcttaaataggtctcactactacctaaagttccattcctaatcaattcaagcaactcaggtctcaacattctcaattgcactcggctctagaagtgctcg 24716336  T
Q  273 cgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  24716335 cgaggcgagagcatctgctcgccatggcgagtacaagcc 24716297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 15477883 - 15477943
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15477883 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15477943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 19928329 - 19928269
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  19928329 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 19928269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 24628305 - 24628245
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  24628305 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 24628245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 24735671 - 24735742
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||| ||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  24735671 atcctcaaatgcaatcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagcc 24735742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 23187353 - 23187414
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||| |||||    
T  23187353 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagcc 23187414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 23598616 - 23598677
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||| |||||    
T  23598616 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagcc 23598677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 61094 - 61154
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| ||||||| ||||||  |||||||||||||||||||||||    
T  61094 cactcagttctggaagtgctcgcgaggcgggagcatcagctcgccatggcgagtacaagcc 61154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 12901339 - 12901279
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  12901339 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 12901279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 21327393 - 21327333
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||  ||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  21327393 cactcagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagcc 21327333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 24175093 - 24175145
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  24175093 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 24175145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 24649636 - 24649696
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  24649636 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 24649696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 24655162 - 24655110
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  24655162 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 24655110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 24870173 - 24870225
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  24870173 tcagttctggaagtgctcatgaggcgagagcatctgctcgccatggcgagtac 24870225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 25961358 - 25961306
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  25961358 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 25961306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 27379259 - 27379199
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  27379259 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 27379199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 27383305 - 27383245
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  27383305 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 27383245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 27602076 - 27602136
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  27602076 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 27602136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 44370133 - 44370065
Alignment:
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||||||||||||  |||||||  |||||||||||||| ||||||||||||| ||||||||||    
T  44370133 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagcc 44370065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 45678178 - 45678074
Alignment:
Q  22 acaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcat----aatttaagtaatgcaattaatcattata 117  Q
    |||| |||| ||||||||||||||| | ||||||||| || || | |||| |||||||||||||||||    | || ||||||||||||||||||||| |    
T  45678178 acaacaacattatgacatcatataaaggtatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaa 45678079  T
Q  118 tcaca 122  Q
    |||||    
T  45678078 tcaca 45678074  T

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Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 26125484 - 26125542
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcc 26125542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 41667230 - 41667288
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcc 41667288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 21318462 - 21318402
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||  ||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  21318462 cacttagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagcc 21318402  T

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Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 306
Target Start/End: Original strand, 40428599 - 40428810
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    |||||||||| |||||||||| ||||||| | |  || | ||||||  |||||||||||||| ||||   ||||||  ||||| ||||||| ||||||||    
T  40428599 aagtaatgcatttaatcattaaatcacattacaaacagc-ttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattacta 40428697  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagtt-ctgaaagtgctcacgaggcgagagcatatgctcg 293  Q
    ||| | | |||||  ||| |||| | || | || ||| || | | || ||||   |||||||||| ||| |||||||| |||||||||||||| ||||||    
T  40428698 ccctaagttccattcctactcaattcattcaactcaggtcacgacattctcaaaagcactcagtttctggaagtgctcgcgaggcgagagcatctgctcg 40428797  T
Q  294 ccatggcgagtac 306  Q
    ||||||| |||||    
T  40428798 ccatggcaagtac 40428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 41530836 - 41530780
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||    
T  41530836 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtaca 41530780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 24503399 - 24503449
Alignment:
Q  261 tgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||  |||||||||| || | ||||||||||||||||||||||    
T  24503399 tgaaagtgctcgggaggcgagagtatctactcgccatggcgagtacaagcc 24503449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 32451891 - 32451834
Alignment:
Q  115 atatcacatcatat-tcaacattaacatctcataacagcttcatagattgtagttaat 171  Q
    |||||||||||||  |||||||||||||| ||||||||||||| | |||||| |||||    
T  32451891 atatcacatcataaatcaacattaacatcccataacagcttcacaaattgtaattaat 32451834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 240; Significance: 1e-133; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 69848 - 70149
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  69848 agcataggcagattacaacaacagtatgacatcacataacgatatcaa-taaaaacag-caacatctcaatcattcattcataattcaagtaatgcaatt 69945  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  69946 aatcattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 70045  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  70046 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 70145  T
Q  308 agcc 311  Q
    ||||    
T  70146 agcc 70149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 10413 - 10351
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| ||||  |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  10413 tgcactcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 10351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 58237 - 58185
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  58237 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 58185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 21714600 - 21714903
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  21714600 agcataggcagattacaacaacagtatgacatcatataacgatatcaaataaaaacaagcaacatctcaatcattcattcataattcaagtaatgcaatt 21714699  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  21714700 aaacattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 21714799  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  21714800 ctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 21714899  T
Q  308 agcc 311  Q
    ||||    
T  21714900 agcc 21714903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 311
Target Start/End: Complemental strand, 42865274 - 42864977
Alignment:
Q  10 cataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaa 109  Q
    |||| ||||||| ||| |||| |||||||||| |||||||||||||||||||    ||| ||||||||||| |||||||||| | |||||||||||||||    
T  42865274 catatgcagattgcaacaacagtatgacatcacataacgatatcaaataaaa----gcaacatctcaatcactcattcataactcaagtaatgcaattaa 42865179  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
    |||||| ||||||| ||| ||||||||||| | |||||||||||||| |||||| ||||||  ||||||||||||| |||||||||||||||||||||||    
T  42865178 tcattaaatcacattataatcaacattaacctttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatct 42865079  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| ||    
T  42865078 ctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactag 42864979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 8 - 304
Target Start/End: Complemental strand, 20091539 - 20091246
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| |||||||||| | || | |||||| | ||||| |||||||||||| |    || |||||||||||||||||||||||| ||||  |||||||    
T  20091539 agcatagacagattacaacagcagtttgacattacataacaatatcaaataaacaa---caacatctcaatcattcattcataattcaagtcgtgcaatt 20091443  T
Q  108 -aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtcca 206  Q
     |||||||| | |||||||||||||||||||||||| | ||||||||||| |||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  20091442 taatcattaaa-cacatcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtcca 20091344  T
Q  207 tctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||| ||| |||||||||||||||||    
T  20091343 tctcaaatcaaattatgcgacacagatcgcaatatcctcatttgcactcagttctggaagtgctcgcgaggtgagaacatctgctcgccatggcgagt 20091246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 70 - 311
Target Start/End: Complemental strand, 21788048 - 21787808
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  ||||||||||||  ||| |||||||| |||||||| ||||||| ||||| ||||||||||| ||||||||| |||||    
T  21788048 catcttaatcattcaataatatcttaagtaatgcacataa-cattatataacatcataatcaacatcaacatttcataacagctgcatagattgcagtta 21787950  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | |||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  21787949 acttcttatataggttacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaatttctcacttgcactcagttctgaaagtgc 21787850  T
Q  270 tcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || |||||||||||||| ||||||||||||||||||| ||||    
T  21787849 tcgcgaggcgagagcatctgctcgccatggcgagtacgagcc 21787808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 6151908 - 6152208
Alignment:
Q  14 ggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattca-taa---tttaagtaatgcaattaa 109  Q
    ||||||| |||| |||| |||||||||||||||  |||||||||| || || | |||| |||||||||||||||| |||   || |||||||||||||||    
T  6151908 ggcagatcacaacaacattatgacatcatataaatatatcaaatagaagcaagtatcaactcaatcattcattcactaacatttcaagtaatgcaattaa 6152007  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
    |||||| ||||||| |||  || | ||||||| |||||||||||||| |||||| | ||||  || |||||||||| |||||||||| ||| |||||||     
T  6152008 tcattaaatcacattataaacagc-ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatcc 6152106  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||||||| | |||||||||||||||||| ||||| || |||| ||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||    
T  6152107 ctaatcaattcatgcgacacagatcgcaacatcctaacatgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaag 6152206  T
Q  310 cc 311  Q
    ||    
T  6152207 cc 6152208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 17 - 311
Target Start/End: Complemental strand, 22831440 - 22831144
Alignment:
Q  17 agattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaattaatca 112  Q
    |||| |||| |||| ||||| ||||||||| ||||||||||| || || | |||| |||| |||||||||||| |    || ||||||||||||||||||    
T  22831440 agatcacaacaacattatgaaatcatataaagatatcaaatagaagcaagtatcaactcagtcattcattcattaacatttcaagtaatgcaattaatca 22831341  T
Q  113 ttatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctcta 212  Q
    ||| ||||||| ||| ||| |  |||||| |||||||||||||| |||||| | ||||  || |||||||||| |||||||||| ||| ||||||| |||    
T  22831340 ttaaatcacattataatcagc--taacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatcccta 22831243  T
Q  213 atcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    | ||| | |||||||||||||||||| || |||| ||||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22831242 aacaagtcatgcgacacagatcgcaacattctcaattgcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22831144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 18182120 - 18181887
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||  ||||||| |||  |||| ||| |||||||||||||||||| || ||| |||||| |||||    
T  18182120 atcattcaataatatttcaagtaatgcaattaatcattgaatcacattataaacaac-ttagcatctcataacagcttcacagtttgcagttaacttctt 18182022  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    ||| | ||| |||||||||| ||| ||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| | ||    
T  18182021 atacaagtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcaag 18181922  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| |||||||||| |||||||||||||    
T  18181921 gcgagagcatctgctcgccatagcgagtacaagcc 18181887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 21022685 - 21022991
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||| |||||||| |||| || | ||||||||||||||| || |||||||| || || | |||| ||||||||| |||| || |    || |||||||||    
T  21022685 agcacaggcagatcacaacaaaattatgacatcatataaagacatcaaatagaagcaagtatcaactcaatcatccattaattaatatttcaagtaatgc 21022784  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    ||||||||||||  |||||| ||| ||| | ||||||  |||||| ||||||| |||||| ||||||  ||||||||||||| |||||||||| ||||||    
T  21022785 aattaatcattaattcacattataatcagc-ttaacagttcataatagcttcacagattgcagttaacatcttatataggtcacattactacctaagggt 21022883  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||  ||||||||| | || ||||||||| | | || |||||| | ||| ||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  21022884 ccatccttaatcaaatcaagcaacacagatcacgacattctcactagtactgagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 21022983  T
Q  304 tacaagcc 311  Q
    ||| ||||    
T  21022984 tacgagcc 21022991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 306
Target Start/End: Complemental strand, 22449265 - 22449037
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||| |||||||||||| ||||||| ||| ||||| ||||||  |||||||||||||| |||||| ||||||  ||||    
T  22449265 atcattcaataatatttcaagtaatgaaattaatcattaaatcacattataatcaac-ttaacagttcataacagcttcacagattgcagttaacatctt 22449167  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    ||||| ||| |||||||||| ||||||||||  |||||||| | | || || |||||| ||| || |||| ||||||||||||||| |||||||| ||||    
T  22449166 atatatgtcacattactacctaagggtccattcctaatcaattcaagcaactcagatcacaacattctcatttgcactcagttctggaagtgctcgcgag 22449067  T
Q  277 gcgagagcatatgctcgccatggcgagtac 306  Q
    |||||||||| |||||||||||||||||||    
T  22449066 gcgagagcatctgctcgccatggcgagtac 22449037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 22468592 - 22468462
Alignment:
Q  181 aggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcga 280  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  22468592 aggtctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcga 22468493  T
Q  281 gagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| |||||  |||| ||||||||||||    
T  22468492 gagcatctgctcttcatgtcgagtacaagcc 22468462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 261
Target Start/End: Original strand, 48603669 - 48603820
Alignment:
Q  111 cattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
    ||||||||||||||||| ||||||  ||||  || ||| |||||||| ||||| || |||| |||||||||||||| || ||||||| | ||||||||||    
T  48603669 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatactacctaggggtccatct 48603768  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttct 261  Q
    |||||||| | |||| ||||||||||||| ||||| ||||||||||||||||    
T  48603769 ctaatcaattcatgcaacacagatcgcaacatcctaacttgcactcagttct 48603820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 3472824 - 3472692
Alignment:
Q  179 ataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggc 278  Q
    ||||||| |||||||||| ||| ||||| | |||||||  || ||||| ||||||||||| |||||   ||||| ||||||||| |||||||| ||||||    
T  3472824 ataggtcacattactacctaagagtccaaccctaatcagtttgtgcgaaacagatcgcaacatcctattttgcattcagttctggaagtgctcgcgaggc 3472725  T
Q  279 gagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| ||||||||||||||||||||||||    
T  3472724 gagagcatctgctcgccatggcgagtacaagcc 3472692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 88 - 311
Target Start/End: Complemental strand, 16080432 - 16080211
Alignment:
Q  88 ataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctc 187  Q
    |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||| |||||||||    
T  16080432 ataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataaaagcttcacagttctcagttaatctcttaaataggtctc 16080335  T
Q  188 attactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcata 287  Q
    |||| |||| || | ||| |  ||||||||   | || || ||| || ||| ||||||   |||||||||||||| |||||||| ||||||||||||||     
T  16080334 attagtacctaaagttcctttcctaatcaatccaagcaactcaggtctcaaaatcctcgaatgcactcagttctggaagtgctcgcgaggcgagagcatc 16080235  T
Q  288 tgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||||||||||||||    
T  16080234 tgctcgccatggcgagtacaagcc 16080211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 33797801 - 33797872
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  33797801 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 33797872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 17678416 - 17678354
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17678416 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 17678354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 36819137 - 36819075
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  36819137 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 36819075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 12647147 - 12647208
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  12647147 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 12647208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 45310194 - 45310137
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  45310194 gcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 45310137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 21305582 - 21305653
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  21305582 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagcc 21305653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 46975745 - 46975804
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  46975745 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 46975804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 8761460 - 8761399
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||    
T  8761460 gcactcagttctggaagtgttcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 8761399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 23819126 - 23819066
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  23819126 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 23819066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 45489571 - 45489515
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  45489571 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 45489515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 19212135 - 19212206
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  ||||||||||| || |||||||| |||||||||||||| |||||||||||| |||||||||||    
T  19212135 atcctcaaatgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcc 19212206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 21615718 - 21615776
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 21615776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 18882645 - 18882706
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||  |||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  18882645 gcactcagttcttgaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagcc 18882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 24782929 - 24782872
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    |||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||    
T  24782929 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 24782872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 16375284 - 16375224
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  16375284 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 16375224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 20228636 - 20228576
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  20228636 cactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagcc 20228576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 21407635 - 21407695
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  21407635 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 21407695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 52639821 - 52639881
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  52639821 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 52639881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 20138364 - 20138420
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||| ||||||||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaag 20138420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 18393791 - 18393734
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||| |||||  |||||||| |||||||||||||  ||||||||||||||||||||    
T  18393791 gcactccgttctataagtgctcgcgaggcgagagcaactgctcgccatggcgagtaca 18393734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 21438081 - 21438133
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  21438081 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 21438133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 22532394 - 22532453
Alignment:
Q  80 attcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    |||||||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| ||||    
T  22532394 attcattcataattcaagtaatgcacataa-cattatatcacatcataatcaacatcaaca 22532453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 23763498 - 23763550
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  23763498 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 23763550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 33049911 - 33049863
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcga 302  Q
    ||||||||| |||||||| |||||||||||||| |||| ||||||||||    
T  33049911 tcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcga 33049863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 50210219 - 50210150
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    ||||||||  || ||||||||||| |||||||||  |||| ||||||||||||||||| ||||||| ||||    
T  50210219 catctcaagtatacattcataattcaagtaatgcgtttaa-cattatatcacatcataatcaacatcaaca 50210150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 21162078 - 21162118
Alignment:
Q  267 tgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||| |||||||||||| | ||||||||||||||||||||    
T  21162078 tgctcgcgaggcgagagcctctgctcgccatggcgagtaca 21162118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 228; Significance: 1e-126; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 65861 - 65559
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| || ||||||||||    
T  65861 agcataggcagattacaacaacagtatgacatcatataaggatatcaaataaaa-caagcatcatctcaatcattcattcataattcaattaatgcaatt 65763  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || |||||||||||||||||||||||| ||||||||||||||||  ||| || ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  65762 aaacattatatcacatcatattcaacactaacatctcataacaggatcacaggttgcagttaacttcttatataggtctcattactacccaagggtccat 65663  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  65662 ctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgagtaca 65563  T
Q  308 agcc 311  Q
    ||||    
T  65562 agcc 65559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 53672 - 53904
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  53672 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctcagttaatatctt 53769  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||| |  ||||||||   | || || ||| || ||| |||||||  |||||||||||||| |||||||| ||||    
T  53770 aaataggtctcattagtacctaaagttcctttcctaatcaatccaagcaactcaggtctcaaaatcctcaaatgcactcagttctggaagtgctcgcgag 53869  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  53870 gcgagagcatctgctcgccatggcgagtacaagcc 53904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 10 - 311
Target Start/End: Original strand, 1395 - 1693
Alignment:
Q  10 cataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaa 109  Q
    |||||||||||||||| |||| |||||||||||  ||||||||||||||||| ||   |||||||||||||||||||||||||| |||||||||||||||    
T  1395 cataggcagattacaacaacattatgacatcatgcaacgatatcaaataaaagca---atcatctcaatcattcattcataattcaagtaatgcaattaa 1491  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| | |||| ||||||||||||||||| ||||||||||||||||||||    
T  1492 tcattatatcacatcatattcaacactaacatctaataacagcttcgtagattgcatttaacttcttatataggtctcaatactacccaagggtccatct 1591  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||    
T  1592 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaag 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 15731 - 15435
Alignment:
Q  15 gcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaatcatt 114  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15731 gcagattacaacaacattatgacatcatataacgatatcaaatataagcaagcatcatctcaatcattcattcataattcaagtaatgcaattaatcatt 15632  T
Q  115 atatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaat 214  Q
    || |||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15631 atctcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaat 15532  T
Q  215 caaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||  ||||| || |||||||||||||| |||| |||||||||||||||||||    
T  15531 caaattaagcgacacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcgagagcatctgcttgccatggcgagtacaagcc 15435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 9026 - 8723
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||| |||||||| |||     
T  9026 agcataggcagattacaacaacattatgacatcatataacgatatcaaatacaagcaagcatcatctcaatcattcattcataattcaagtaatgaaatc 8927  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || ||| || |||||||||||||||||| ||||| |||||||||||||| |||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  8926 aaacatcatctcacatcatattcaacatcaacatttcataacagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccat 8827  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  8826 ctctaatcgaattatgcgacacaggtcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 8727  T
Q  308 agcc 311  Q
    ||||    
T  8726 agcc 8723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 216; Significance: 1e-118; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 19863032 - 19863333
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||| ||||||||| |||| |||||||||| ||||||||||||| ||||||||| || ||||||||||||||||||||| || |||||||||||||    
T  19863032 agcataggaagattacaacaacagtatgacatcacataacgatatcaa-taaaaacag-caacatctcaatcattcattcatatttcaagtaatgcaatt 19863129  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  19863130 aatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 19863229  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  19863230 ctctaatcaaatgatgtgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 19863329  T
Q  308 agcc 311  Q
    ||||    
T  19863330 agcc 19863333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 19873174 - 19873475
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||| |||||| || || ||||||||||||||||||||| || |||||||||||||    
T  19873174 agcataggcagattacaacaacagtatgacatcacataacgatatcaa-taaaaatag-caacatctcaatcattcattcatatttcaagtaatgcaatt 19873271  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  19873272 aatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 19873371  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  19873372 ctctaataaaatgatgcgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 19873471  T
Q  308 agcc 311  Q
    ||||    
T  19873472 agcc 19873475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 25642250 - 25641949
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| |||||||||| |||| |||||||||| ||||||||||||| ||||||||  || ||||| |||||||||||||||||| |||||||||||||    
T  25642250 agcatagacagattacaacaacagtatgacatcacataacgatatcaa-taaaaacaa-caacatcttaatcattcattcataattcaagtaatgcaatt 25642153  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  25642152 aatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcattactacccaagggtccat 25642053  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||| ||    
T  25642052 ctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagttca 25641953  T
Q  308 agcc 311  Q
    ||||    
T  25641952 agcc 25641949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 22438853 - 22439155
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||||||| |||||| |||| |||||||||| ||| ||||||||| ||||| || | ||||||| |||||||||||| ||||| |||||||| ||||    
T  22438853 agcataggcagtttacaacaacagtatgacatcacata-cgatatcaagtaaaagcaagtatcatcttaatcattcattcgtaattcaagtaatgtaatt 22438951  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || | ||||||||||||||| |||||| ||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  22438952 aaactttatatcacatcataatcaacactaacatctcataacagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtccat 22439051  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||| |||| ||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||| ||||||||||||    
T  22439052 ctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtaca 22439151  T
Q  308 agcc 311  Q
    ||||    
T  22439152 agcc 22439155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 22432303 - 22432605
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||||||| |||||| |||| |||||||||| |||  |||||||| ||||| ||   |||||||||||||||||||  ||||| |||||||| ||||    
T  22432303 agcataggcagtttacaacaacagtatgacatcacatat-gatatcaagtaaaagcaaatatcatctcaatcattcatttgtaattcaagtaatgtaatt 22432401  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || || |||||||||||||| |||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22432402 aaacaatatatcacatcataatcaacactgacatctcataacagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccat 22432501  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||| |||||||| ||| ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  22432502 ctcaaatcaaataatgagacacagatcgcaatatactaacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 22432601  T
Q  308 agcc 311  Q
    ||||    
T  22432602 agcc 22432605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 19 - 304
Target Start/End: Complemental strand, 22334948 - 22334664
Alignment:
Q  19 attacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt-aatcattata 117  Q
    ||||||| | ||||||||||||| | ||||||||| || |||  ||| || |||||||||||||||||||||||| ||||| ||||||| |||||||| |    
T  22334948 attacaacagcaatatgacatcacacaacgatatcgaacaaat-cag-caacatctcaatcattcattcataattcaagtagtgcaatttaatcattaaa 22334851  T
Q  118 tcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaa 217  Q
    |||||| || |||| |||| | ||||||||||||||| | |||||| |||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  22334850 tcacattatgttcaccatttatatctcataacagctttacagattgcagttaacttcttatataggtctcattgctacccaggggtccaactctaatcaa 22334751  T
Q  218 attatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||| |||||||||||    
T  22334750 attatgcgacacagatcgcaatatcctcacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagt 22334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 8 - 304
Target Start/End: Complemental strand, 15894501 - 15894202
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||| |||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||| |    || |||||||||    
T  15894501 agcataagcagatcacaacaacattatgacatcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgc 15894402  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||| |||||||||||||  || |||||||||| |||||||||||||||||    
T  15894401 aattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgtagttaacatcctatataggtcacattactacccaagggt 15894303  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||||| ||| |||||||||||||  |||||  | |||||||||||||||||||| |||||||| ||||| |||||  | ||||||||||||||||    
T  15894302 ccatctctaaacaagttatgcgacacaggacgcaaagttctcacttgcactcagttctggaagtgctcgcgaggtgagagactctgctcgccatggcgag 15894203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 311
Target Start/End: Complemental strand, 21740088 - 21739788
Alignment:
Q  14 ggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaattaa 109  Q
    ||||||| |||| |||| ||||||||||||||| ||||||||||| |  || | |||| ||||||||||||||||| |    || |||||||||||||||    
T  21740088 ggcagatcacaacaacattatgacatcatataaagatatcaaatagatgcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaa 21739989  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
    ||||||  |||||| |||  || | ||||||| |||||||||||||| |||||| | ||||  || |||||||||| |||||||||| ||| |||||||     
T  21739988 tcattaagtcacattataaccagc-ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatcc 21739890  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||| ||| | ||| |||||||||||||| || |||| ||| ||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||    
T  21739889 ctaaacaactcatgtgacacagatcgcaacattctcaattgtactcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaag 21739790  T
Q  310 cc 311  Q
    ||    
T  21739789 cc 21739788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 77 - 302
Target Start/End: Original strand, 18907228 - 18907452
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| | ||| ||||||  |||||||||||||| | |||| ||||||  ||||    
T  18907228 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatgaac-ttaacagttcataacagcttcacatattgcagttaacatctt 18907326  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||||| |||||||| | |||||||||||||||||| || |||| |||||||| |||||| |||||||| ||||    
T  18907327 aaataggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatttgcactctgttctggaagtgctcgcgag 18907426  T
Q  277 gcgagagcatatgctcgccatggcga 302  Q
    |||||||||| |||||||||||||||    
T  18907427 gcgagagcatctgctcgccatggcga 18907452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 16924776 - 16924649
Alignment:
Q  180 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 279  Q
    ||||||||||||||||||| |||||||   |||||||||  ||||||||||||||||| ||  |||||||||||||||||||| |||||||| |||||||    
T  16924776 taggtctcattactacccaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgctcgcgaggcg 16924677  T
Q  280 agagcatatgctcgccatggcgagtaca 307  Q
    ||||||| ||||||||||||||||||||    
T  16924676 agagcatctgctcgccatggcgagtaca 16924649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 310
Target Start/End: Complemental strand, 16523307 - 16523170
Alignment:
Q  173 tcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctca 272  Q
    ||||| ||||||| |||||||||| |||| |||| | |||||||| |||||||| ||||||||||| || || ||||||| ||||||||| ||||||||     
T  16523307 tcttaaataggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcg 16523208  T
Q  273 cgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    |||||||||||||| |||||||||||||||||||||||    
T  16523207 cgaggcgagagcatctgctcgccatggcgagtacaagc 16523170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 21834820 - 21834656
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||||||| |||||  ||||||  ||||| |||||||  ||||||||  ||||||||||| |||||||| |||||||| ||||||||||| ||||| |    
T  21834820 aacagcttcacagatttcagttaacatcttaaataggtcagattactactgaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaa 21834721  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||||||| |||||||| |||||||||||||| | |||||||||| || ||||||||    
T  21834720 cttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatggtgattacaagcc 21834656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 31164744 - 31164613
Alignment:
Q  180 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 279  Q
    ||||||||| ||||||||| |||||||||||||||||||  ||||||||||| ||||| ||  |||||||||||||| ||||| |||| ||| ||||||     
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtactcgcgaggca 31164645  T
Q  280 agagcatatgctcgccatggcgagtacaagcc 311  Q
    || |||||||||| ||||||||||||||||||    
T  31164644 agggcatatgctcaccatggcgagtacaagcc 31164613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 15041447 - 15041318
Alignment:
Q  180 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 279  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||| ||||| |  |||||||    
T  15041447 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggttgcgaggcg 15041348  T
Q  280 agagcatatgctcgccatggcgagtacaag 309  Q
    ||||||| |||||| |||||||||||||||    
T  15041347 agagcatctgctcgtcatggcgagtacaag 15041318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 16965199 - 16965076
Alignment:
Q  188 attactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcata 287  Q
    ||||||||||| |||||||   |||||||||  |||||||||||||| || ||  |||||||||||| ||||||| ||||||||  |||||||||||||     
T  16965199 attactacccaggggtccactcctaatcaaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgctcgtgaggcgagagcatc 16965100  T
Q  288 tgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||||||||||||||    
T  16965099 tgctcgccatggcgagtacaagcc 16965076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 17804304 - 17804536
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  17804304 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctcagttaatatctt 17804401  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||| |  ||||||||   | || || ||| || ||| |||||||  |||||||||||||| |||||||| ||||    
T  17804402 aaataggtctcattagtacctaaagttcctttcctaatcaatccaagcaactcaggtctcaaaatcctcaaatgcactcagttctggaagtgctcgcgag 17804501  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  17804502 gcgagagcatctgctcgccatggcgagtacaagcc 17804536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 16929487 - 16929364
Alignment:
Q  180 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 279  Q
    ||||| ||||||||||| | |||||||   |||||||||  ||||||||||||||||| ||  |||    |||||||||| | ||||||||| |||||||    
T  16929487 taggtatcattactaccgaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactc----gcactcagttttcaaagtgctcgcgaggcg 16929392  T
Q  280 agagcatatgctcgccatggcgagtaca 307  Q
    ||||||| ||||||||||||||||||||    
T  16929391 agagcatctgctcgccatggcgagtaca 16929364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 22429859 - 22429797
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22429859 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22429797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 16741484 - 16741545
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16741484 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16741545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 311
Target Start/End: Original strand, 22863052 - 22863285
Alignment:
Q  76 aatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaaca-ttaacatctcataacagcttcatagattgtagttaatttc 174  Q
    ||||||||| | |||||| |||||||||||| ||||| || ||||||| |||   |||| ||| ||| |||  ||||||||| | ||   ||||||  ||    
T  22863052 aatcattcaataataattcaagtaatgcaatcaatcaataaatcacattata---aacacttagcatttcaatacagcttcacaaataacagttaacatc 22863148  T
Q  175 ttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacg 274  Q
    ||| ||||||||||||| |||| || | |||||  |||||| ||| |  |||| ||| || |||  ||||||   ||||||| ||||| |||||||| ||    
T  22863149 ttagataggtctcattagtacctaaagttccattcctaatccaatcaaacgactcaggtctcaaattcctcaaaagcactcaattctggaagtgctcgcg 22863248  T
Q  275 aggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| |||||||||||||||    
T  22863249 aggcgagagcatctgctcgccgtggcgagtacaagcc 22863285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 5616642 - 5616581
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  5616642 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 5616581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 12496586 - 12496647
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  12496586 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 12496647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 12706966 - 12707027
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  12706966 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagcc 12707027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 14472548 - 14472609
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  14472548 gcactcaattctggatgtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagcc 14472609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 22592628 - 22592571
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22592628 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22592571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 23657248 - 23657191
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  23657248 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 23657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 1587558 - 1587498
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  1587558 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 1587498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 27415780 - 27415709
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||| ||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  27415780 atcctcaaatgcactcaattctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagcc 27415709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 27567436 - 27567381
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  27567436 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 27567381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 18180780 - 18180842
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  18180780 tgcattcagttctggaagtgctcgcgaggcgagagcatctgctctccatggcgagtacaagcc 18180842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 21702568 - 21702626
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 21702626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 1644983 - 1645044
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| ||||| | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  1644983 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagcc 1645044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 19663046 - 19663107
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| || |||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  19663046 gcactcagttttggaagtgctcgcgaggcgatagcatctgctcgccatggcgagtacaagcc 19663107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 25135492 - 25135439
Alignment:
Q  258 ttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  25135492 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 25135439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 8244140 - 8244200
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  8244140 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 8244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 9482120 - 9482060
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  9482120 cactcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatggcaagtacaagcc 9482060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 11567142 - 11567202
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  11567142 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 11567202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 19870870 - 19870930
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  19870870 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 19870930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 20907809 - 20907753
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| ||||||||  ||||||||||||| |||||||||||||||||||    
T  20907809 gcactcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtac 20907753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 22059577 - 22059509
Alignment:
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||||||||||||  |||||||  |||||||||||||| ||||||||||||| ||||||||||    
T  22059577 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagcc 22059509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 23395348 - 23395408
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  23395348 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 23395408  T

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Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 20803377 - 20803320
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| || |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  20803377 tcagttatggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 20803320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 27553435 - 27553386
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatgg 299  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  27553435 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 27553386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 12618671 - 12618611
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||| || |||||||||||||||    
T  12618671 cactcaattctggaagtgctcgcgaggcgagagcatctgctcaccgtggcgagtacaagcc 12618611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 19790603 - 19790551
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| |||||| ||||||| |||||||||||||||||||    
T  19790603 tcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtac 19790551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 23990200 - 23990260
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||| | |||||||||||||||    
T  23990200 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgtcgtggcgagtacaagcc 23990260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 18955577 - 18955530
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||||    
T  18955577 aagtgctcgcgaggcgagagcatctgctcgtcatggcgagtacaagcc 18955530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 25767167 - 25766935
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || || |||| ||| |||   ||| ||| |||||| || |||| || |   ||||||| ||||    
T  25767167 atcattcaataataattcaagtaatgcaatcaatcaataaattacattataatcac--ttagcatttcataatagtttcacagttctcagttaatatctt 25767070  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||| |  ||||||||   | || || ||| || ||| |||||||  |||| ||||||||  ||  ||||  |||    
T  25767069 aaataggtctcattagtacctaaagttcctttcctaatcaacccaagcaactcaggtctcaaaatcctcaaatgcaatcagttctagaatggctcgtgag 25766970  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  25766969 gcgagagcatctgctcgccatggcgagtacaagcc 25766935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 18821812 - 18821766
Alignment:
Q  111 cattatatcacatcatat-tcaacattaacatctcataacagcttca 156  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  18821812 cattatatcacatcataaatcaacattaacatctcataacagcttca 18821766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 18917093 - 18917033
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||  |||||||| |||||||||| ||| |||||||| |||||||||||||||    
T  18917093 cactcaattctagaagtgctcgcgaggcgagaacatctgctcgccgtggcgagtacaagcc 18917033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 18409833 - 18409764
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    |||||||||||| ||||||||||| || |||| ||  ||| ||||||||||||||||| ||||||| ||||    
T  18409833 catctcaatcatccattcataattcaaataatacatataa-cattatatcacatcataatcaacatcaaca 18409764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 25629361 - 25629292
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    ||||||||| || ||||||||||| |||||||||   ||| ||||||||||||||||| ||||||| ||||    
T  25629361 catctcaattatacattcataattcaagtaatgcgtataa-cattatatcacatcataatcaacatcaaca 25629292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 34369792 - 34369742
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||| |||||||| ||||||||||| | || ||||||||||||||||||||    
T  34369792 tctggaagtgctcgcgaggcgagagtacatactcgccatggcgagtacaag 34369742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 8 - 308
Target Start/End: Original strand, 20034 - 20333
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  20034 agcataggcagattacaacaacagtatgacatcatataacaatatcaaataaaa-caagcatcatctcaatcattcattcataattcaagtaatgcaatt 20132  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||| || ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  20133 aaacattatatcacatcatattcaacactaacatctcataacagcttcacaggttgcagttaacttcttatataggtctcattactacccaagggtccat 20232  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    | |||||||||| |||||||||||||  || |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||    
T  20233 ccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtaca 20332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 36508 - 36811
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| || |||||||||||||    
T  36508 agcataggcaaattacaacaacaatatgacatcatataacgatatcaaatataaacacgcaacatctcaatcattcattcatagttcaagtaatgcaatt 36607  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||||||||||||||||| |    
T  36608 aaacattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtcctt 36707  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||| ||||| ||||||||||||||| | | |||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||    
T  36708 ctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 36807  T
Q  308 agcc 311  Q
    ||||    
T  36808 agcc 36811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 17354006 - 17353703
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||| |||||||| |||     
T  17354006 agcataggcagattacaacaacattatgacatcatataacgatatcaaatacaagcaagcatcatctcaatcattcattcataattcaagtaatgaaatc 17353907  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || ||| || |||||||||||||||||| ||||| |||||||||||||| |||||  | |||| ||||||||||||||||||||||||||||||||||||    
T  17353906 aaacatcatctcacatcatattcaacataaacatttcataacagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccat 17353807  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  17353806 ctctaatcgaattatgcgacacaaatcgcaatatcctcacttgcactcagttctgcaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 17353707  T
Q  308 agcc 311  Q
    ||||    
T  17353706 agcc 17353703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 19899149 - 19899448
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||| ||| || | |||||||||| || ||||||||||||||||    ||| ||| ||||||| |||||||||| | |||||||| ||||    
T  19899149 agcataggcagattgcaacaatagtatgacatcacatgacgatatcaaataaaa----gcaacatttcaatcactcattcataactcaagtaatgaaatt 19899244  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| ||||||| |||||||||||||||||||||    
T  19899245 aatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccat 19899344  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||     
T  19899345 ctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtact 19899444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 8 - 306
Target Start/End: Original strand, 19983147 - 19983441
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||| ||| |||| |||||||||| |||||||||||||||||||    ||| ||| ||||||| |||||||||| | |||||||||||||    
T  19983147 agcataggcagattgcaacaacagtatgacatcacataacgatatcaaataaaa----gcaacatttcaatcactcattcataactcaagtaatgcaatt 19983242  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| ||||||| |||||||||||| || |||||    
T  19983243 aatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccat 19983342  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||| || |||||||| |||||||||||||| ||||| |||||||||||||    
T  19983343 ctctaatcaaattatgcgacacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtac 19983441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 21168794 - 21168487
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |    || |||||||||    
T  21168794 agcataggcagatcacaacaacattatgacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgc 21168695  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||| |||||||   |||||||||||| |||    
T  21168694 aattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggt 21168595  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || | |||||||  |||||||||||||| ||||||||||||||||    
T  21168594 ccatctctaatcaaactatgcgacacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatctgctcgccatggcgag 21168495  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  21168494 tacaagcc 21168487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 24755768 - 24756074
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||| |||||| |||| |||| ||||||||||||||| |||||||||| ||| || |||||| ||||||||||||||||| |    || |||||||||    
T  24755768 agcataagcagatcacaacaacattatgacatcatataaagatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgc 24755867  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||| |||||| ||||||  || |||||||||| |||||||||||||||||    
T  24755868 aattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggt 24755966  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||||| ||| ||||||||||||| ||||||  | |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  24755967 ccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 24756066  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  24756067 tacaagcc 24756074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 16184774 - 16185081
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||| ||| || |||| |||| ||| ||||||| ||  ||||| |||||||| || ||||||||||||||||||||| || |    || ||| |||||    
T  16184774 agcataagcatatcacaacaacattatcacatcatgtagagatattaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagcaatgc 16184873  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||| ||||| ||||||| ||| ||||||||||||||||||| |||||||| |||||| ||||||  ||||||||||||| |||||||||||| ||||    
T  16184874 aattaaacattaaatcacattataatcaacattaacatctcatatcagcttcacagattgcagttaacatcttatataggtcacattactacccaggggt 16184973  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  16184974 ccatctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 16185073  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  16185074 tacaagcc 16185081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 8 - 297
Target Start/End: Complemental strand, 21162121 - 21161838
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||| || |    || |||||||||    
T  21162121 agcataggcagatcacaacaacattatgacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagtaatgc 21162022  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    ||||||          |||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||| |||||||   |||||||||||| |||    
T  21162021 aattaa----------acatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggt 21161932  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccat 297  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  21161931 ccatctctaatcaaactatacgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 21161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 70 - 311
Target Start/End: Complemental strand, 23776841 - 23776600
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  ||||||||||||  ||| |||||||| |||||||||||||||| ||||| |||||||||||||| | |||| |||||    
T  23776841 catcttaatcattcaataatatcttaagtaatgcacataa-cattatataacatcatattcaacatcaacatttcataacagcttcacaaattgcagtta 23776743  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacaga-tcgcaatatcctcacttgcactcagttctgaaagtg 268  Q
    | |||||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  23776742 acttcttatataggtcacattactacctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctgaaagtg 23776643  T
Q  269 ctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||| |||||||||||||| ||||||| || |||||||||||||    
T  23776642 ctcgcgaggcgagagcatctgctcgcgatagcgagtacaagcc 23776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 311
Target Start/End: Original strand, 377332 - 377631
Alignment:
Q  15 gcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataat----ttaagtaatgcaattaat 110  Q
    |||||| |||| |||| ||||||||||| ||| ||||||||||| || || |||||| ||||||||||||||||| |     | ||||||||||||||||    
T  377332 gcagatcacaacaacattatgacatcatgtaaagatatcaaatagaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgcaattaat 377431  T
Q  111 cattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctc 210  Q
    ||||| ||||||| ||  ||| | ||||||| |||||||||||||| |||||| ||||||  ||||||||||||| |||||||||| ||||||||||| |    
T  377432 cattaaatcacattatgatcagc-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccc 377530  T
Q  211 taatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||||| | | || ||||||||| | | || |||| | ||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||    
T  377531 taatcaattcaagcaacacagatcacgacattctcattagcactcagttctggaagtgctcgcgagacgagagcatctgctcgccatggcgagtacaagc 377630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 20466038 - 20465805
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| ||||| ||| ||| |||||||||||||| |||||| ||||||  ||||    
T  20466038 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttagcatttcataacagcttcacagattgcagttaacctctt 20465940  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    ||||||||| |||||||||| |||||||| || |||||||| | | || ||||||| | | | || |||||||||||||||||||| |||||||| ||||    
T  20465939 atataggtcacattactacctaagggtccgtccctaatcaattcaagcaacacagaacacgacattctcacttgcactcagttctggaagtgctcgcgag 20465840  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||  |||||||||||||||||||||||    
T  20465839 gcgagagcatccgctcgccatggcgagtacaagcc 20465805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 21395910 - 21395748
Alignment:
Q  149 cagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 248  Q
    |||||||| |||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||    
T  21395910 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcact 21395811  T
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| | |||||| |||||||||||||| |||| ||| |||||||||||||||    
T  21395810 tgcactcagttctggacgtgctcgcgaggcgagagcatctgcttgccttggcgagtacaagcc 21395748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 149 - 311
Target Start/End: Complemental strand, 21790403 - 21790241
Alignment:
Q  149 cagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 248  Q
    |||||||| |||||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||    
T  21790403 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcact 21790304  T
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| | |||||| |||||||||||||| |||| ||| |||||||||||||||    
T  21790303 tgcactcagttctggacgtgctcgcgaggcgagagcatctgcttgccttggcgagtacaagcc 21790241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 160 - 306
Target Start/End: Original strand, 19976647 - 19976793
Alignment:
Q  160 attgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagtt 259  Q
    |||| |||||| |||||| ||||||| |||||||||| | || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19976647 attgcagttaacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagtt 19976746  T
Q  260 ctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||| |||||||| |||||||||||||| |||||||||| ||||||||    
T  19976747 ctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtac 19976793  T

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Target: chr8; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 21389362 - 21389218
Alignment:
Q  167 ttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaag 266  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||| |||    
T  21389362 ttaacttcatatattggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaag 21389263  T
Q  267 tgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| ||| |||||||||| ||||| || |||||||||||||||    
T  21389262 tgctcgcgaagcgagagcatctgctcaccttggcgagtacaagcc 21389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 30643291 - 30643057
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagctt-catagattgtagttaatttct 175  Q
    |||||||| | ||| || ||||||||||||||||||||| |||| || ||| ||||| ||||||  || ||||||||| || |||||| ||||||  |||    
T  30643291 atcattcaataatatttcaagtaatgcaattaatcattaaatcatattataatcaac-ttaacagttcgtaacagctttcacagattgcagttaacatct 30643193  T
Q  176 tatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacga 275  Q
    || ||||||| |||||||||| ||||||||| | |||||||| || ||||| ||||||||||| ||||| ||||||| ||| ||||| |||||||| |||    
T  30643192 taaataggtcacattactacctaagggtccaaccctaatcaatttgtgcgaaacagatcgcaacatcctaacttgcattcaattctggaagtgctcgcga 30643093  T
Q  276 ggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  30643092 ggcaagagcatctgctcgccatggcgagtacaagcc 30643057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 15602947 - 15602783
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||||||| |||||  ||||||  ||||| ||||||| |||||||||  ||||||||| | |||||||| |||||||| ||||||||||| || || |    
T  15602947 aacagcttcacagatttcagttaacatcttaaataggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaa 15602848  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| | ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15602847 cttgcattaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 15611399 - 15611235
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||||||| |||||  ||||||  ||||| ||||||| |||||||||  ||||||||| | |||||||| |||||||| ||||||||||| || || |    
T  15611399 aacagcttcacagatttcagttaacatcttaaataggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaa 15611300  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| | ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15611299 cttgcattaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15611235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 19259654 - 19259367
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataat----ttaagtaatgc 103  Q
    |||||| |||| | |||| |||| ||||||||||||||  |||||||||||||| || |||||| ||||||||||||||||| |     | ||||||||     
T  19259654 agcataagcagttcacaacaacattatgacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatga 19259555  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||  |||||| ||||||| |||||| ||||||  |||| |||||||| |||||||||| ||||||    
T  19259554 aattaatcattaaatcacattataatcaac-ttaacagttcataatagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggt 19259456  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||||| |||||||       ||||            || || ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||     
T  19259455 ccatccctaatca-------cgac------------attctaacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaa 19259375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 17926705 - 17926473
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||| |||||||||| ||||||| | |  |||| ||| ||  ||| |||||||||| |||||  | ||||  ||||    
T  17926705 atcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaac-ttagcagttca-aacagcttcacagatttcaattaacatctt 17926608  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || || | ||||| |||||||||  ||||||| ||||    
T  17926607 aaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaatttgcattcagttctgggagtgctcgcgag 17926508  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  17926507 gcgagagcatctgctcgccatggcgagtacaagcc 17926473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 165 - 311
Target Start/End: Complemental strand, 16410167 - 16410021
Alignment:
Q  165 agttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaa 264  Q
    ||||||| ||||| ||||||| |||||||||| ||||||||| | |||||||| || ||||||||||||||||| ||||| | ||||| |||||||||||    
T  16410167 agttaatatcttaaataggtcacattactacctaagggtccaaccctaatcaatttgtgcgacacagatcgcaacatcctaatttgcattcagttctgaa 16410068  T
Q  265 agtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
     |||||| | | |||||||||| ||||||||||||||||| ||||||    
T  16410067 ggtgctcgccaagcgagagcatctgctcgccatggcgagttcaagcc 16410021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 22010513 - 22010445
Alignment:
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22010513 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22010445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 15538726 - 15538787
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15538726 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15538787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 17828411 - 17828350
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17828411 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 17828350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 20856252 - 20856191
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  20856252 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 20856191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 24434065 - 24434004
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  24434065 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 24434004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 16231313 - 16231242
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||||||    
T  16231313 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagcc 16231242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 23834441 - 23834512
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| |||||||||| |||||||||||||    
T  23834441 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatcgcgagtacaagcc 23834512  T

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Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 15532166 - 15532227
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| |||||| |||||||||||||||||    
T  15532166 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcggcatggcgagtacaagcc 15532227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 249 - 310
Target Start/End: Complemental strand, 16861155 - 16861094
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    |||||||||||||| |||||||| |||||||||||||| | |||||||||||||||||||||    
T  16861155 tgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagc 16861094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 30308582 - 30308521
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  30308582 gcactcagttctggaagtgctcgcgaggcgagagcattagctcgccatggcgagtacaagcc 30308521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 22113555 - 22113495
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22113555 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 22135058 - 22134998
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  22135058 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22134998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 23846842 - 23846782
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  23846842 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 23846782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 39094769 - 39094713
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  39094769 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 39094713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 22028825 - 22028896
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||| ||||    
T  22028825 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtactagcc 22028896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 18619756 - 18619817
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||| ||||||||||||    
T  18619756 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgacgagtacaagcc 18619817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 22166208 - 22166148
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  22166208 cactcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcc 22166148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 43252092 - 43252152
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  43252092 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 43252152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 17055214 - 17055156
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgactacaagcc 17055156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 32598959 - 32599017
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| | |||||||||||| ||||||||||||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaagcc 32599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 32605491 - 32605549
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| | |||||||||||| ||||||||||||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaagcc 32605549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 19278110 - 19278051
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| |||||||||||||| |||||||||||||| |||||||| |||| ||||||||||    
T  19278110 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggc-agtacaagcc 19278051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 22045138 - 22045197
Alignment:
Q  252 actcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| |||| |||||||| |||||||||||||| ||||||||||| | ||||||||||    
T  22045138 actcaggtctggaagtgctcgcgaggcgagagcatctgctcgccatgacaagtacaagcc 22045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 20527736 - 20527788
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  20527736 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 20527788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 21972411 - 21972355
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||| ||||| |||||||| || ||||||||||| |||||||| |||||||||||    
T  21972411 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21972355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 21976496 - 21976440
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||| ||||| |||||||| || ||||||||||| |||||||| |||||||||||    
T  21976496 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21976440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 16092348 - 16092279
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    ||||||||  || |||||||||||||||||||||   ||| ||||||||||||||||| ||||||| ||||    
T  16092348 catctcaaatatacattcataatttaagtaatgcgtataa-cattatatcacatcataatcaacatcaaca 16092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 9703317 - 9703620
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||| ||| |||| |||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||||| |||||||||||||    
T  9703317 agcataggcagattgcaacaacagtatgacatcacataacgatatcaaataaaagtatgcatcatctcaatcattcattcataattcaagtaatgcaatt 9703416  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || | | || |||||||||| ||||||||||||| |||||||||||||| |||||| |||||| |||||||||||||| ||||| |||||||||||||||    
T  9703417 aaacgtaatctcacatcataatcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccat 9703516  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  9703517 ctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 9703616  T
Q  308 agcc 311  Q
    ||||    
T  9703617 agcc 9703620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 10 - 311
Target Start/End: Complemental strand, 18154902 - 18154602
Alignment:
Q  10 cataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaa 109  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||    
T  18154902 cataggcagattacaacaacagtatgacatcacataacgatatcaaataaaa-caagcaacatctcaatcattcattcataattcaagtaatgcaattaa 18154804  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
     ||||||||| |||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||| |||||||||    
T  18154803 acattatatcgcatcatattcaacattaacatctcataacagcttcacatattgcagttaacttcttatataggtctcattactacccaatggtccatct 18154704  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
     ||||||||| ||||||||||||||||| |  ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  18154703 ttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 18154604  T
Q  310 cc 311  Q
    ||    
T  18154603 cc 18154602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 19649552 - 19649250
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||    
T  19649552 agcatagacagattacaacaacaatatgacatcacataacaatatcaaataaaaacag-caacatctcaatcattcattcataattcaagtaatgcaatt 19649454  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    ||||||||||||||||||||||||||| ||||||| | |||| |||||| |||||| |||||| |||| || ||||||||| ||||||||||||||||||    
T  19649453 aatcattatatcacatcatattcaacactaacatcacttaactgcttcacagattgcagttaacttctaatttaggtctcaatactacccaagggtccat 19649354  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||| ||||||||| ||||||||||||||||||||    
T  19649353 ctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgagacgagagcatctgctcgccatggcgagtaca 19649254  T
Q  308 agcc 311  Q
    ||||    
T  19649253 agcc 19649250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 49 - 311
Target Start/End: Original strand, 24054560 - 24054822
Alignment:
Q  49 atatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa 148  Q
    ||||||| ||||| || |||||||||||||| ||||||||||||| |||||||| | |||| ||| ||||||||||||| |||||| |||||||||||||    
T  24054560 atatcaattaaaagcaagcatcatctcaatctttcattcataattcaagtaatgtatttaaacatcatatcacatcataatcaacactaacatctcataa 24054659  T
Q  149 cagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 248  Q
    |||||||| |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  24054660 cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacagatcgcaatattctcact 24054759  T
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    | |||||||||||| |||||||| | || ||||||||| ||||||||||||||||||||||||    
T  24054760 ttcactcagttctggaagtgctcgcaagacgagagcatctgctcgccatggcgagtacaagcc 24054822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 17138043 - 17137829
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||||||||||  ||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||    
T  17138043 aagtaatgca--taaacattataatacatcatattcaacacaaacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattacta 17137946  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||||||||||| |||||||| | | || ||||||||| ||| || |||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  17137945 cctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 17137846  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  17137845 catggcgagtacaagcc 17137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 12321723 - 12321508
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||||||||||||| ||||||| ||| ||||| ||||||  ||||||||| |||| |||||| ||||||  ||||||||||||| ||||||||    
T  12321723 aagtaatgcaattaatcattaaatcacattataatcaac-ttaacagttcataacagtttcacagattgcagttaacatcttatataggtcacattacta 12321625  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||| ||||||| |||||||| | |||||||||||||||| | || |||| ||||||||||||||| |||||||| |||||||||||||| |||||||    
T  12321624 cctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 12321525  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  12321524 catggcgagtacaagcc 12321508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 173 - 311
Target Start/End: Original strand, 11880468 - 11880606
Alignment:
Q  173 tcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctca 272  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  11880468 tcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctggaagtgctca 11880567  T
Q  273 cgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  11880568 cgaggcgagagcatctgctcgccatggcgagtacaagcc 11880606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 14429999 - 14430232
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| ||| | ||||||  ||||| |||||||| ||||   ||||||  ||||    
T  14429999 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagc-ttaacagttcatagcagcttcacagatctcagttaacatctt 14430097  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || || ||||||| ||||||||| |||||||| ||||    
T  14430098 aaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgag 14430197  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  14430198 gcgagagcatctgctcgccatggcgagtacaagcc 14430232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 12187153 - 12187367
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  ||||||||||||||   |||||||| || |||||||| |||||| |||||| |||||||||||||||||||||||    
T  12187153 aagtaatgca--taaacattataatacatcatattcaactcaaacatctcttatcagcttcacagattgcagttaacttcttatataggtctcattacta 12187250  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || || ||||||||||||||||| | | || ||| | ||| | |||| |||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  12187251 cctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 12187350  T
Q  295 catggcgagtacaagcc 311  Q
    || ||||||||||||||    
T  12187351 cacggcgagtacaagcc 12187367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 11312755 - 11312987
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  11312755 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctcagttaatatctt 11312852  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||| |  ||||||||   | || || ||| || ||| |||||||  |||||||||||||| |||||||| ||||    
T  11312853 aaataggtctcattagtacctaaagttcctttcctaatcaatccaagcaactcaggtctcaaaatcctcaaatgcactcagttctggaagtgctcccgag 11312952  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  11312953 gcgagagcatctgctcgccatggcgagtacaagcc 11312987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 10508919 - 10508848
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  10508919 atcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagcc 10508848  T

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Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 13635468 - 13635236
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |    |||||| ||||    
T  13635468 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctctgttaatatctt 13635371  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||| ||||||| |||| |||| ||  | |||||||||   | || || ||  || ||| |||||||  |||||||||||||| |||||||| ||||    
T  13635370 aaataggcctcattagtacctaaggttcattatctaatcaatccaagcaactcaagtctcaaaatcctcaaatgcactcagttctggaagtgctcgcgag 13635271  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| || |||||||||||||||||||||    
T  13635270 gcgagagcatctgttcgccatggcgagtacaagcc 13635236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 15605271 - 15605039
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||||||| |||||| ||||||| || |   ||||||| ||||    
T  15605271 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttaacatttcataatagcttcacagttctcagttaatatctt 15605174  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||| |  ||||||||   | || || | | || |||  ||||||  |||||||||||||  ||||| |||||||    
T  15605173 aaataggtctcattagtacctaaagttcctttcctaatcaatccaagcaactcgggtctcaaagtcctcaaatgcactcagttctagaagtggtcacgag 15605074  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || ||||||| ||||||||||||||||||||||||    
T  15605073 gcaagagcatctgctcgccatggcgagtacaagcc 15605039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 11987489 - 11987551
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11987489 tgcactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagcc 11987551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 48593285 - 48593223
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  48593285 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 48593223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 6801490 - 6801551
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6801490 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 6801551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 18896 - 18825
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| | ||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  18896 atcctcaatagcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagcc 18825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 9593622 - 9593684
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  9593622 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagcc 9593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 9644585 - 9644647
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  9644585 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagcc 9644647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 16438862 - 16438801
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16438862 gcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16438801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 16724459 - 16724398
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||    
T  16724459 gcactcagttctgaaagtgctcgcgaggcgagagcatcagctcgccatggcgagttcaagcc 16724398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 17701473 - 17701412
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||    
T  17701473 gcactcagttctgaaagtgctcgcgaggcgagagcatcagctcgccatggcgagttcaagcc 17701412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 18557249 - 18557310
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  18557249 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 18557310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 2760413 - 2760481
Alignment:
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||||||||||||| |||||||| |||||||||||||| | ||||||||| ||||||||||||    
T  2760413 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgacgagtacaagcc 2760481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 13149433 - 13149493
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  13149433 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 13149493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 15728603 - 15728663
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  15728603 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 15728663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 12318404 - 12318466
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||| ||||||| |||||||||| |||||||||||||    
T  12318404 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatagcgagtacaagcc 12318466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 13462039 - 13462100
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||||||||| |||||||||||    
T  13462039 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggtgagtacaagcc 13462100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 14217192 - 14217253
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  14217192 gcactcagttctggaagtgctcgcgaggtgagagcatcagctcgccatggcgagtacaagcc 14217253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 15580968 - 15581025
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||    
T  15580968 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 15581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 26292673 - 26292734
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| ||||| | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  26292673 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagcc 26292734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 9445982 - 9445930
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  9445982 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 9445930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 12718948 - 12719008
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  12718948 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 12719008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 12723859 - 12723919
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  12723859 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 12723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 16114521 - 16114581
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  16114521 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagcc 16114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 16117674 - 16117734
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  16117674 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagcc 16117734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 16907027 - 16906967
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  16907027 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 16906967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 18279683 - 18279743
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  18279683 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 18279743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 18283646 - 18283706
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  18283646 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 18283706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 8917704 - 8917765
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||| |||||||  ||||||||| |||||||||||||    
T  8917704 gcactcagttctggaagtgctcgcgaggcaagagcatcagctcgccattgcgagtacaagcc 8917765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 12715144 - 12715204
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||| ||||||| |||||||| |||||||||||||||    
T  12715144 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagcc 12715204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 14959450 - 14959502
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| ||||||||||| || | ||||||||||||||||||||||    
T  14959450 tctgaaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 14959502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 20569420 - 20569368
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||  |||||||| |||||||||||||| |||||||||||||||||||    
T  20569420 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 20569368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 35151897 - 35151944
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  35151897 aagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagcc 35151944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 3271958 - 3272079
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    |||||||||||||||||| || ||||||||||| ||| | |||| |  |||||||||||||| | |||  | ||||  |||||||||||||||| |||||    
T  3271958 aagtaatgcaattaatcagtaaatcacatcataatcagc-ttaatagttcataacagcttcacatatttcatttaacatcttatataggtctcactacta 3272056  T
Q  195 cccaagggtccatctctaatcaa 217  Q
    || || | |||||  ||||||||    
T  3272057 cctaatgttccattcctaatcaa 3272079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 16275772 - 16275830
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| |||||||||||||| || |||||||||| ||||||||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcaagtacaagcc 16275830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 12318233 - 12318351
Alignment:
Q  76 aatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttct 175  Q
    ||||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||||||| |||||| ||||||| || |   ||||||| |||    
T  12318233 aatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatca--cttaacatttcataatagcttcacagttctcagttaatatct 12318330  T
Q  176 tatataggtctcattactacc 196  Q
    || ||||||||||||| ||||    
T  12318331 taaataggtctcattagtacc 12318351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 11262615 - 11262667
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  11262615 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 11262667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 11548086 - 11548034
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  11548086 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 11548034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 11554682 - 11554630
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  11554682 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 11554630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 12692782 - 12692834
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  12692782 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 12692834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 14953484 - 14953536
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  14953484 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 14953536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 18302489 - 18302529
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    |||||||| |||||||||||| | |||||||||||||||||    
T  18302489 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 18302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 25039029 - 25038977
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||| ||||||||||||||||||    
T  25039029 tctggaagtgctcgcgaggcgagagtatctactcaccatggcgagtacaagcc 25038977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 18290 - 18593
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||| ||| |||| |||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||||| |||||||||||||    
T  18290 agcataggcagattgcaacaacagtatgacatcacataacgatatcaaataaaagtatgcatcatctcaatcattcattcataattcaagtaatgcaatt 18389  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || | | || |||||||||| ||||||||||||| |||||||||||||| |||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  18390 aaacgtaatctcacatcataatcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccat 18489  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||| ||||||||||||||||||||    
T  18490 ctctaatcaaattatgcgacacatatcgcaatatcctcacttgcactcagttctggaagcgctcgtgaggcgagagcatttgctcgccatggcgagtaca 18589  T
Q  308 agcc 311  Q
    ||||    
T  18590 agcc 18593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 76998 - 76938
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||| |||||||||||||||||||    
T  76998 cactcaattctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagcc 76938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 13569556 - 13569865
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacag------gcatcatctcaatcattcattcataatttaagtaat 101  Q
    |||||||||||||| ||| |||| |||||||||| |||||||||||||||||||| |       |||||||||||||||||||||||||||| |||||||    
T  13569556 agcataggcagattgcaacaacagtatgacatcacataacgatatcaaataaaaataaaagtaagcatcatctcaatcattcattcataattcaagtaat 13569655  T
Q  102 gcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagg 201  Q
    |||||||| ||| || |||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||||| ||||| |||||||||    
T  13569656 gcaattaaacatcatctcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattaatacccaagg 13569755  T
Q  202 gtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcg 301  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  13569756 gtccatctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcg 13569855  T
Q  302 agtacaagcc 311  Q
    ||||||||||    
T  13569856 agtacaagcc 13569865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 23843532 - 23843831
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| ||||||  || |||| |||||||||| |||||||||||||||||||    ||| ||||||||||| |||||||||| | ||||||| |||||    
T  23843532 agcatagacagattgaaacaacagtatgacatcacataacgatatcaaataaaa----gcaacatctcaatcactcattcataactcaagtaatacaatt 23843627  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||| | ||||| ||| ||||||||||||| |||||||||||||| |||||| ||||||  ||||||||||||| |||||| ||||||||||||||    
T  23843628 aatcattaaaacacattataatcaacattaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccat 23843727  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  23843728 ctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 23843827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 44675689 - 44675985
Alignment:
Q  11 ataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaat 110  Q
    ||||||| ||| ||| |||| |||||||||| |||||||||||||||||||    | | ||| ||||||| |||||||||| | ||||||||||||||||    
T  44675689 ataggcatattgcaacaacagtatgacatcacataacgatatcaaataaaa----gtaacatttcaatcactcattcataactcaagtaatgcaattaat 44675784  T
Q  111 cattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctc 210  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| ||||||| |||||||||| | |||||||||||    
T  44675785 cattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctc 44675884  T
Q  211 taatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||| |||||| |||    
T  44675885 taatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatggggagtactagc 44675984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 12570068 - 12570374
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||| |||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||| |    || |||||||||    
T  12570068 agcataagcagatcacaacaacattatgacatcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgc 12570167  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||| |||||| ||||||  || |||||||||| |||||||||||||||||    
T  12570168 aattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggt 12570266  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||||| ||| ||||||||||||| ||||||  | |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  12570267 ccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 12570366  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  12570367 tacaagcc 12570374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 76 - 311
Target Start/End: Original strand, 15093892 - 15094126
Alignment:
Q  76 aatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttct 175  Q
    ||||||||| | |||  ||||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||    
T  15093892 aatcattcaataatatattaagtaatgcacataa-cattatatcacatcatattcaacattaacatttcataacagcttcagagattgcagttaacttct 15093990  T
Q  176 tatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacga 275  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||    
T  15093991 tatataggtcacattactaaccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcga 15094090  T
Q  276 ggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||  |||||||||||||||||||||||    
T  15094091 ggcgagagcatcagctcgccatggcgagtacaagcc 15094126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 100 - 311
Target Start/End: Complemental strand, 15125130 - 15124920
Alignment:
Q  100 atgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaa 199  Q
    |||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||| |||||| ||||||  | ||| | ||||| | ||||||||||     
T  15125130 atgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcagttaacat-ttaaaaaggtcactttactacccag 15125032  T
Q  200 gggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatgg 299  Q
    ||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |||||||    
T  15125031 gggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatgg 15124932  T
Q  300 cgagtacaagcc 311  Q
    ||||||||||||    
T  15124931 cgagtacaagcc 15124920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 15121783 - 15121569
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||| |||||   ||||||||||| |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  15121783 aagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcagcctcacagattgcagttaacttcttatataggtctcattacta 15121686  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || || ||||||| ||||| ||| |||| |||||||||||||||  | |||||||||||||| ||||| |||||||| |||||||||||||| ||||| |    
T  15121685 cctaatggtccatgtctaaacaagttattcgacacagatcgcaaagttctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctcac 15121586  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  15121585 catggcgagtacaagcc 15121569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 16488077 - 16487844
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||| |||||||||| ||||||| ||| ||| | ||||||  |||||  ||||||| ||||   | ||||  ||||    
T  16488077 atcattcaataatatttcaagtaatgcatttaatcattaaatcacattataatcagc-ttaacagttcatagtagcttcacagatctcaattaacatctt 16487979  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||| | |||||||||| ||||||||||| | |||||| |||||||| ||||||||||| ||||| ||||||| ||||||||| |||||||| ||||    
T  16487978 aaataggacacattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgag 16487879  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  16487878 gcgagagcatctgctcgccatggcgagtacaagcc 16487844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 16356883 - 16356719
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||||||| |||||  ||||||  ||||| ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || || |    
T  16356883 aacagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaa 16356784  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16356783 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16356719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 36133961 - 36133729
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||| | |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  36133961 atcattcaataataactcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttcccagttaatatctt 36133864  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | | | |  ||||||||   | || || ||| || ||| |||||||  |||||||||||||| |||||||| ||||    
T  36133863 aaataggtctcattaatacctaaagtttctttcctaatcaacccaagcaactcaggtctcaaaatcctcaaatgcactcagttctggaagtgctcgcgag 36133764  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  36133763 gcgagagcatctgctcgccatggcgagtacaagcc 36133729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 276
Target Start/End: Complemental strand, 16348592 - 16348466
Alignment:
Q  150 agcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcactt 249  Q
    ||||||| |||||  ||||||  ||||| ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || || ||||    
T  16348592 agcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaactt 16348493  T
Q  250 gcactcagttctgaaagtgctcacgag 276  Q
    ||| ||||||||| || ||||| ||||    
T  16348492 gcattcagttctggaaatgctcgcgag 16348466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 15353134 - 15353073
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15353134 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15353073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 19757427 - 19757368
Alignment:
Q  252 actcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  19757427 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 19757368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 19782379 - 19782438
Alignment:
Q  252 actcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  19782379 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 19782438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 43255999 - 43255928
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  ||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  43255999 atcctcaaatgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 43255928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 1951590 - 1951528
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  1951590 tgcactcagttctggaagtgctcgcgaagcgagagcatctgctcgccatggcgagtacaagcc 1951528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 17152315 - 17152254
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  17152315 gcactcagttctggaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagcc 17152254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 18237170 - 18237231
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  18237170 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 18237231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 23139548 - 23139609
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  23139548 gcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagcc 23139609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 26243493 - 26243432
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  26243493 gcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcc 26243432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 45938425 - 45938486
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  45938425 gcacttagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 45938486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 9556809 - 9556869
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  9556809 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 9556869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 11250389 - 11250333
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  11250389 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 11250333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 28569271 - 28569211
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  28569271 cactcaattctggaagtgctcacgaagcgagagcatctgctcgccatggcgagtacaagcc 28569211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 16678415 - 16678356
Alignment:
Q  252 actcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16678415 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16678356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 3413078 - 3413135
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  3413078 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 3413135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 16243220 - 16243167
Alignment:
Q  258 ttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16243220 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16243167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 27534303 - 27534364
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| ||||| | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  27534303 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 27534364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 4561160 - 4561100
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  4561160 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 4561100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 5756764 - 5756704
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  5756764 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 5756704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 16351672 - 16351620
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  16351672 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 16351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 18222205 - 18222145
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  18222205 cactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 18222145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 33742657 - 33742717
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  33742657 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 33742717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 2015057 - 2015117
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||| | ||||| ||||||||||||||||||    
T  2015057 cactcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatggcgagtacaagcc 2015117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 14708445 - 14708401
Alignment:
Q  267 tgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||    
T  14708445 tgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 14708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 18602569 - 18602513
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    |||||| || |||||||| ||||||||||||||  ||||||||||||||||||||||    
T  18602569 tcagttttggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagc 18602513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 25555798 - 25555850
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| ||||||||  ||||||||||||| |||||||||||||||||||    
T  25555798 tcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtac 25555850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 14038763 - 14038937
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcat-aacagcttcatagattgtagtt 168  Q
    ||||||||| || |||||||| || ||||||||||  ||| ||||||||||||||||| ||||||| ||||  |  | |||||||||| ||||| || ||    
T  14038763 catctcaattatacattcatatttcaagtaatgcacataa-cattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataatt 14038861  T
Q  169 aatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcct 244  Q
    ||| || |   || |||||| |||||||| | ||| || |||| | ||| || ||||||||||||||||| |||||    
T  14038862 aatatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcct 14038937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 42997275 - 42997217
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| |||||||||||||| || |||||||||||||||| ||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacgagcc 42997217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 9530711 - 9530772
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||| ||||||||   |||||||||||||||| |||||    
T  9530711 gcactcagttctggaagtgctcgcgaggtgagagcatcatctcgccatggcgagtataagcc 9530772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 14679249 - 14679301
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  14679249 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 14679301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 14685458 - 14685510
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  14685458 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 14685510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 23838720 - 23838772
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  23838720 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 23838772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 18609153 - 18609106
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| |||||||||||||   |||||||||||||||||||||||    
T  18609153 aagtgctcgcgaggcgagagcaccagctcgccatggcgagtacaagcc 18609106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 41385564 - 41385513
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    |||| |||||||| ||||||||||| || | |||||||||||||||||||||    
T  41385564 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagc 41385513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 6190617 - 6190663
Alignment:
Q  111 cattatatcacatcatat-tcaacattaacatctcataacagcttca 156  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||    
T  6190617 cattagatcacatcatacatcaacattaacatctcataacagcttca 6190663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 16377529 - 16377465
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacat 135  Q
    ||||||||| || ||||||||||| |||||||||   ||| ||||||||||||||||| |||||||    
T  16377529 catctcaattatacattcataattcaagtaatgcgtataa-cattatatcacatcataatcaacat 16377465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 22634023 - 22633983
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    |||||||| |||||||||||| | |||||||||||||||||    
T  22634023 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 22633983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 10 - 310
Target Start/End: Original strand, 23408484 - 23408784
Alignment:
Q  10 cataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaa 109  Q
    ||||| |||||||||| ||||   |||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||| |||||||| ||||||    
T  23408484 catagacagattacaacaacagcgtgacatcatacaacgatatcaattaaaagcaagcatcatctcaatcattcattcataattcaagtaatgtaattaa 23408583  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
     |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||| | ||||||  || ||||||||||||||||||||    
T  23408584 acattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtccatct 23408683  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  23408684 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 23408783  T
Q  310 c 310  Q
    |    
T  23408784 c 23408784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 17525221 - 17524951
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||| | ||| |||| |||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||||| |||||||||||||    
T  17525221 agcataggcagagtgcaacaacagtatgacatcacataacgatatcaaataaaagtatgcatcatctcaatcattcattcataattcaagtaatgcaatt 17525122  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    || | | || |||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  17525121 aaacgtcatctcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccat 17525022  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggc 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  17525021 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggc 17524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 14878579 - 14878271
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||||||||||| ||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |    || |||||||||    
T  14878579 agcataggcagattgcaacaacattatgacatcatataaggatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgc 14878480  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaaggg- 202  Q
    |||||| | | || | |||||||||||||||||||||| |||||| ||||||| |||||| |||||| |||||||||| ||| |||||||||| | |||     
T  14878479 aattaaacttcatcttacatcatattcaacattaacatttcataatagcttcacagattgcagttaacttcttatataagtcacattactacctaggggg 14878380  T
Q  203 tccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcga 302  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| |||||||| |||||||||| ||| |||||||||||||||    
T  14878379 tccatctctaatcaaattatgcgacacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaacatctgctcgccatggcga 14878280  T
Q  303 gtacaagcc 311  Q
    |||| ||||    
T  14878279 gtacgagcc 14878271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 15060338 - 15060644
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataat----ttaagtaatgc 103  Q
    ||||||||||| | |||| |||| ||||||||||||||  |||||||||||||| || |||||| ||||||||||||||||| |     | ||||||||     
T  15060338 agcataggcagttcacaacaacattatgacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatga 15060437  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||  |||||| ||||||| |||||| |||||   ||||||||||||| || ||||||| ||||||    
T  15060438 aattaatcattaaatcacattataatcaac-ttaacagttcataatagcttcacagattgcagttaccatcttatataggtcacaatactacctaagggt 15060536  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||||| |||||||| | |||||||||||||||||| ||||| ||||||| ||||| ||| |||||||| |||||||||||||| ||||||||||||||||    
T  15060537 ccatccctaatcaattcatgcgacacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 15060636  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  15060637 tacaagcc 15060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 10 - 310
Target Start/End: Complemental strand, 23077538 - 23077245
Alignment:
Q  10 cataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaa 105  Q
    ||||||||||| |||| |||| ||||||||||||||| |||||||||||||  ||  ||||||||||||||||||||||| |    || |||||||||||    
T  23077538 cataggcagatcacaacaacattatgacatcatataaggatatcaaataaag-caaacatcatctcaatcattcattcattaacatttcaagtaatgcaa 23077440  T
Q  106 ttaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtcc 205  Q
    ||||          ||||||||  |||||| ||||| |||||||||||||| | |||  ||| || |||| |||||||||||||||||||| ||||||||    
T  23077439 ttaa----------acatcataaccaacataaacatttcataacagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtcc 23077350  T
Q  206 atctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagta 305  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| | || |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  23077349 atctctaatcaaattatgcgacacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagta 23077250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 23053150 - 23052843
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa-----tttaagtaatg 102  Q
    |||||| |||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |     || ||||||||    
T  23053150 agcataagcagatcacaacaacattatgacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaatcatttcaagtaatg 23053051  T
Q  103 caattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaaggg 202  Q
    |||||||| |||| ||||||| |||  |||| |||| || |||||| ||||||| | | || | | ||  || || |||| || |||||||||||| |||    
T  23053050 caattaataattaaatcacattataaacaac-ttaaaatttcataatagcttcacaaactgcattaaacatcctaaatagatcacattactacccagggg 23052952  T
Q  203 tccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcga 302  Q
    ||||||||||||||| ||||||||||||| ||| || ||||||||||||| ||| ||||| |||||||| |||||||||||||| |||||||||||||||    
T  23052951 tccatctctaatcaagttatgcgacacaggtcgtaacatcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcatctgctcgccatggcga 23052852  T
Q  303 gtacaagcc 311  Q
    |||||||||    
T  23052851 gtacaagcc 23052843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 15051562 - 15051868
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataat----ttaagtaatgc 103  Q
    ||||||||||| | |||| |||| ||||||||||||||   ||||||||||||| || |||||| ||||||||||||||||| |     | | ||||||     
T  15051562 agcataggcagttcacaacaacattatgacatcatataggaatatcaaataaaatcaagcatcaactcaatcattcattcattaacatctcaggtaatga 15051661  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||  |||||| ||||||| | |||| ||||||  ||||||||||||| || ||||||| ||||||    
T  15051662 aattaatcattaaatcacattataatcaac-ttaacagttcataatagcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggt 15051760  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||||| |||||||| | |||||||||||||| ||| ||||| ||||||| ||||| ||  |||||||| |||||||||||||| ||||||||||||||||    
T  15051761 ccatccctaatcaattcatgcgacacagatcacaacatcctaacttgcattcagtcctagaagtgctcgcgaggcgagagcatctgctcgccatggcgag 15051860  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  15051861 tacaagcc 15051868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 178 - 311
Target Start/End: Complemental strand, 15877727 - 15877594
Alignment:
Q  178 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgagg 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgagg 15877628  T
Q  278 cgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||| ||||||||||||||||||||||||    
T  15877627 cgagagcatctgctcgccatggcgagtacaagcc 15877594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 16909796 - 16910102
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataat----ttaagtaatgc 103  Q
    |||||| |||| | |||| |||| ||||||||||||||  |||||||||||||| || |||||| ||||||||||||||||| |     | |||||||      
T  16909796 agcataagcagttcacaacaacattatgacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaataa 16909895  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||  |||||| ||||||| |||||| ||||||  |||| |||||||| |||||||||| ||||||    
T  16909896 aattaatcattaaatcacattataatcaac-ttaacaattcataaaagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggt 16909994  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||||| |||||||| | | || |||||||||   | || |||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||    
T  16909995 ccatccctaatcaattcaagcaacacagatcatgacattctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgag 16910094  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  16910095 tacaagcc 16910102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 16369454 - 16369760
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataat----ttaagtaatgc 103  Q
    ||||||||||| | |||| |||| ||||||||||||||  |||||||||||||| || |||||| ||||||||||||||||| |     | ||||||||     
T  16369454 agcataggcagttcacaacaacattatgacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatga 16369553  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    ||||||| |||| ||||||| ||| ||||| ||||||  |||||||||||||| | |||| ||||||  |||||||||| || |||||||||| ||||||    
T  16369554 aattaatgattaaatcacattataatcaac-ttaacagttcataacagcttcacatattggagttaacatcttatatagatcacattactacctaagggt 16369652  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
      ||| |||||||| | | || ||||| ||| | | || |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||    
T  16369653 gtatccctaatcaattcaagcaacacatatcacgacattctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgag 16369752  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  16369753 tacaagcc 16369760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 15878114 - 15877947
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||||||||| |||||||| ||||    
T  15878114 agcataggcagattacaacaacaatatgacatcacataacgatatcaa-taaaaacag-caacatctcaatcattcattcataattcaagtaatgaaatt 15878017  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctta 177  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||| |||||| ||||||    
T  15878016 aatcattatatcacatcatattcaacactaacatctcataacaacatcacagattgcagttaacttctta 15877947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 111 - 311
Target Start/End: Original strand, 856288 - 856488
Alignment:
Q  111 cattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctc 210  Q
    |||||||  ||||||||||| |||  |||||||||||  ||||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||| |    
T  856288 cattataatacatcatattcgacacaaacatctcatataagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccc 856387  T
Q  211 taatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||||| | | || ||||||||| ||| || |||||||||||||||||||| |||||||| |||||||||||||| |||||||||  ||||||||||||    
T  856388 taatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccaaagcgagtacaagc 856487  T
Q  311 c 311  Q
    |    
T  856488 c 856488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 322708 - 322941
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| ||| | ||||||  |||||||||||||| ||||  |||||||  ||||    
T  322708 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagc-ttaacacttcataacagcttcacagatcttagttaacatctt 322806  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| |||||||| | ||||||||| || || ||||||| | ||||||| |||||||| ||||    
T  322807 aaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaatagatcgcaacatactaacttgcatttagttctggaagtgctcgcgag 322906  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| |||||||||||| |||||||||||    
T  322907 gcgagagcatctgctcgccatggtgagtacaagcc 322941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 18383916 - 18383683
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| | | ||| | ||||||  ||||||||||||||  |||   ||||||  ||||    
T  18383916 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattaaaatcagc-ttaacagttcataacagcttcactgatctcagttaacatctt 18383818  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || || ||||||| ||||||||  |||||||| ||||    
T  18383817 aaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttcttgaagtgctcgcgag 18383718  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  18383717 gcgagagcatctgctcgccatggcgagtacaagcc 18383683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 12496375 - 12496607
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||| |||||||||| ||||||| | |  |||| ||| ||  ||| |||||||||| |||||  ||||||  ||||    
T  12496375 atcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaac-ttagcagttca-aacagcttcacagatttcagttaacatctt 12496472  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || || ||||||| ||||||||| |||||||| ||||    
T  12496473 aaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgag 12496572  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  12496573 gcgagagcatctgctcgccatggcgagtacaagcc 12496607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 77 - 309
Target Start/End: Complemental strand, 19725911 - 19725680
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||| |||||||||||| ||||||| ||| ||| | ||||||  ||||| ||| |||| |||||  |||| |  ||||    
T  19725911 atcattcaataatatttcaagtaatgtaattaatcattaaatcacattataatcagc-ttaacagttcatagcagtttcacagatttcagttgacatctt 19725813  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | || |||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| ||||| ||||| | ||||||||| |||||||| ||||    
T  19725812 aaatgggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatcctaacttgtattcagttctggaagtgctcgcgag 19725713  T
Q  277 gcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||||||||| ||||||||||||||||||||||    
T  19725712 gcgagagcatctgctcgccatggcgagtacaag 19725680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 78 - 311
Target Start/End: Original strand, 11862911 - 11863143
Alignment:
Q  78 tcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctta 177  Q
    ||||||| | ||| || ||||||||||||||||||||| ||||||||||| ||| | ||||||  ||||| |||||||| |||||  |  |||  |||||    
T  11862911 tcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagc-ttaacagttcatagcagcttcacagatttcaaataacatctta 11863009  T
Q  178 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgagg 277  Q
     ||||||| ||||| |||| |||||||||   |||||||| |||| ||| ||||||||||| ||||| ||||||||||| || || |||| || ||||||    
T  11863010 aataggtcacattaatacctaagggtccaatcctaatcaatttatacgaaacagatcgcaacatcctaacttgcactcaattttggaagtacttacgagg 11863109  T
Q  278 cgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||| ||||||||||||||||| ||||||    
T  11863110 cgagagcatctgctcgccatggcgagttcaagcc 11863143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 165 - 311
Target Start/End: Complemental strand, 11298441 - 11298295
Alignment:
Q  165 agttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaa 264  Q
    ||||||| ||||| ||||||| |||||||||| ||||||||| | |||||||||||||| || ||||||||||| || || | ||||| ||| ||||| |    
T  11298441 agttaatatcttaaataggtcacattactacctaagggtccaaccctaatcaaattatgagaaacagatcgcaacatactaaattgcattcaattctgga 11298342  T
Q  265 agtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| |||||||||||||| || |||||||||||||||||||||    
T  11298341 agtgctcgcgaggcgagagcatctgatcgccatggcgagtacaagcc 11298295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 12173029 - 12173138
Alignment:
Q  202 gtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcg 301  Q
    |||||||  ||||||| ||||||||||||||| |||| ||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  12173029 gtccatccttaatcaatttatgcgacacagatagcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcg 12173128  T
Q  302 agtacaagcc 311  Q
    ||||||||||    
T  12173129 agtacaagcc 12173138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 327163 - 326931
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  327163 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctcagttaatatctt 327066  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| |||| ||| | |||||||||   | || || ||| || ||| |||||||   ||||||||||||| |||||||| ||||    
T  327065 aaataggtctcattagtacctaaggttccttttctaatcaatccaagcaactcaggtctcaaaatcctcaaaagcactcagttctggaagtgctcgcgag 326966  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  326965 gcgagagcatctgctcgccatggcgagtacaagcc 326931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 78 - 311
Target Start/End: Original strand, 11851699 - 11851925
Alignment:
Q  78 tcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctta 177  Q
    ||||||| | ||| || ||||||||||||||||||||| ||||||||||| ||| | ||||||  ||||| |||||||| | |||  || |||  |||||    
T  11851699 tcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagc-ttaacagttcatagcagcttcacaaatttcagataacatctta 11851797  T
Q  178 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgagg 277  Q
     ||||||| ||||       |||||||||   |||||||| |||| ||| ||||||||||| ||||| ||||||||| ||||||| ||||||| ||||||    
T  11851798 aataggtcacattt------aagggtccaatcctaatcaatttatacgaaacagatcgcaacatcctaacttgcacttagttctggaagtgcttacgagg 11851891  T
Q  278 cgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||| || |||||||||||||| ||||||    
T  11851892 cgagagcatctgatcgccatggcgagttcaagcc 11851925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 20461499 - 20461267
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  20461499 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctcagttaatatctt 20461402  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||| |  ||||||||   | || || ||| || ||| ||||| |  |||||||||||||| |||||||| ||||    
T  20461401 aaataggtctcattagtacctaaagttcctttcctaatcaatccaagcaactcaggtctcaaaatccttaaatgcactcagttctggaagtgctcgcgag 20461302  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  20461301 gcgagagcatctgctcgccatggcgagtacaagcc 20461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 26190843 - 26190775
Alignment:
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  26190843 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 26190775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 15482930 - 15483001
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15482930 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15483001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 15849914 - 15849852
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15849914 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15849852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 16797883 - 16797821
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16797883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16797821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 16808710 - 16808648
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16808710 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16808648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 1598308 - 1598247
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  1598308 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 1598247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 12172858 - 12173007
Alignment:
Q  16 cagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaattaatc 111  Q
    ||||| |||| ||||  |||||||||| ||| |||||||||||||| || | | || ||||||||||||||||| |    || |||||||||||||||||    
T  12172858 cagatcacaacaacatcatgacatcatgtaaagatatcaaataaaagcaagtaccaactcaatcattcattcattaacatttcaagtaatgcaattaatc 12172957  T
Q  112 attatatcacatcatattcaacattaacatctcataacagcttcatagatt 162  Q
    |||| ||||||| ||| ||| | ||||||| |||||||||||||| |||||    
T  12172958 attaaatcacattataatcagc-ttaacatttcataacagcttcacagatt 12173007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 15941732 - 15941671
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  15941732 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 15941671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 17242250 - 17242311
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17242250 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 17242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 38814662 - 38814723
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  38814662 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 38814723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 12037787 - 12037719
Alignment:
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  12037787 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatggcgagtacaagcc 12037719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 1982636 - 1982577
Alignment:
Q  252 actcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  1982636 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagcc 1982577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 7793184 - 7793113
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  7793184 atcctcaaatgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagcc 7793113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 11557208 - 11557156
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  11557208 tcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtac 11557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 11594967 - 11594911
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  11594967 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 11594911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 16697071 - 16697131
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  16697071 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 16697131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 42326222 - 42326278
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  42326222 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 42326278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 14179587 - 14179690
Alignment:
Q  111 cattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
    ||||||||||||||||| ||||||  ||||  || ||| |||||||| ||||| || |||| |||||||||||||| || ||||||||| ||||||||||    
T  14179587 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatactacccaggggtccatct 14179686  T
Q  210 ctaa 213  Q
    ||||    
T  14179687 ctaa 14179690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 31097383 - 31097321
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  31097383 tgcactcagttctggaagtgctcgcgaggcggtagcatctgctcgccatggcgagtacaagcc 31097321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 3833952 - 3834013
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  3833952 gcactcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 3834013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 11300339 - 11300278
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| ||||| | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  11300339 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 11300278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 7109981 - 7110041
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  7109981 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 7110041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 7113916 - 7113976
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  7113916 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 7113976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 16690498 - 16690558
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||||||||||||| |||||    
T  16690498 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaaaagcc 16690558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 22337002 - 22337062
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  22337002 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 22337062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 27409470 - 27409410
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  27409470 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 27409410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 28950007 - 28950067
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  28950007 cactcaattctggaagtgctcacggggcgagagcatctgctcgccgtggcgagtacaagcc 28950067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 2897652 - 2897590
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||||| |||||||| |||||||||||||| |||||| |||| ||||||||||||    
T  2897652 tgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgtcatgtcgagtacaagcc 2897590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 3402777 - 3402727
Alignment:
Q  256 agttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  3402777 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 3402727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 11855015 - 11855075
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |  ||||| ||||| |||||||| ||||||||||||||||||||||||    
T  11855015 cactcagttctggatttgctcgcgaggtgagagcatctgctcgccatggcgagtacaagcc 11855075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 15617656 - 15617716
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||| ||||||| |||||||| |||||||||||||||    
T  15617656 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagcc 15617716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 20723288 - 20723340
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| |||||||||||||| | ||||||||||||||||||||||    
T  20723288 tctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagcc 20723340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 22321947 - 22322007
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| || || |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  22321947 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 22322007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 14972982 - 14973143
Alignment:
Q  83 cattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcat-aacagcttcatagattgtagttaatttcttatata 181  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| ||||  || | |||||||||||||||| || ||||  || |   ||    
T  14972982 cattcataattcaagtaatgcatataa-cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcatta 14973080  T
Q  182 ggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcct 244  Q
     |||||| |||||||| | ||| || |||| | ||| || ||||||||| ||||||| |||||    
T  14973081 agtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacaaatcgcaaaatcct 14973143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 24188064 - 24188116
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  24188064 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 24188116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 42386525 - 42386618
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacat--taacatctcataacagcttcatagatt 162  Q
    ||||||||  |||||||||||||| ||| ||||||  ||| ||||||||||||||||| |||||||   ||||||| | |||||||||| |||||    
T  42386525 catctcaaatattcattcataattcaagcaatgcatataa-cattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagatt 42386618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 55149256 - 55149314
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaa 308  Q
    |||||||  |||| |||||||| ||||||||||| || | |||||||||||||||||||    
T  55149256 gcactcaaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaa 55149314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 16862979 - 16862947
Alignment:
Q  279 gagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| ||||||||||||||||||||||||    
T  16862979 gagagcatctgctcgccatggcgagtacaagcc 16862947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 18438689 - 18438749
Alignment:
Q  111 cattatatcacatcatattcaacattaacatctcat-aacagcttcatagattgtagttaa 170  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| ||||| |||||||    
T  18438689 cattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaa 18438749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 307
Target Start/End: Original strand, 23201414 - 23201718
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |    || |||||||||    
T  23201414 agcataggcagattacaacaacattatgacatcatataacgatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgc 23201513  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactaccc-aaggg 202  Q
    |||||| ||| || |||| ||||||||||||||||||  |||||||||||||| |||||| |||||| ||||| |||||||||||||||||||| |||||    
T  23201514 aattaaacatcatctcacgtcatattcaacattaacaattcataacagcttcacagattgcagttaacttcttctataggtctcattactaccccaaggg 23201613  T
Q  203 tccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcga 302  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  23201614 tccatctctaaacaaattatgcgacacagatcgcaatatcctcacttgcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcga 23201713  T
Q  303 gtaca 307  Q
    |||||    
T  23201714 gtaca 23201718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 70 - 311
Target Start/End: Original strand, 37724016 - 37724257
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| |||||| |||||    
T  37724016 catctcaatcattcattcataattcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaacagcttcacagattgcagtta 37724115  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  37724116 acttcttatataggtctcaatactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaagtgc 37724215  T
Q  270 tcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || |||||||||||||| ||||||||||||||||||| ||||    
T  37724216 tcgcgaggcgagagcatctgctcgccatggcgagtaccagcc 37724257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 14079203 - 14079501
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||| ||| |||| |||||||||| ||||||||||||| ||||| ||     ||| ||||||| |||||||||| | |||||||||||||    
T  14079203 agcataggcagattgcaacaacagtatgacatcacataacgatatcaattaaaagca-----catttcaatcactcattcataactcaagtaatgcaatt 14079297  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||| |||||| |||||| ||||||| |||||||||||| ||||||||    
T  14079298 aatcattaaatcacatcatattcaacattaacatttcataagagcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccat 14079397  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||     
T  14079398 ctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctagaagtgctcgcgaggcgagagcatttgctcgccatggcgagtact 14079497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 8 - 310
Target Start/End: Complemental strand, 23501418 - 23501112
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||| ||||||| ||||  |||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |    || |||||||||    
T  23501418 agcacaggcagaatacatcaacattatgacatcatataacgatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgc 23501319  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||| ||| || |||||||||||||||||||||||  |||||||||||||| |||||| | |||| ||||||||||||||||||||||||||||||||    
T  23501318 aattaaacatcatctcacatcatattcaacattaacaattcataacagcttcacagattgcaattaacttcttatataggtctcattactacccaagggt 23501219  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||||||||| |||| ||||||||||||||| || ||||||| |||||||||||| |||||||| ||||| |||||||| ||||||||||||||||    
T  23501218 ccatctctaatcaacttatacgacacagatcgcaacattctcactttcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatggcgag 23501119  T
Q  304 tacaagc 310  Q
    |||||||    
T  23501118 tacaagc 23501112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 26704129 - 26704419
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||| || |||||||||||||    
T  26704129 agcataggcagattacaacaacagtatgacatcatataacgatatcaaataaaa-cag-cagcatctcaatcattcattcatagttcaagtaatgcaatt 26704226  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    ||           ||| |||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  26704227 aa-----------cattatattcaacactaacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccat 26704315  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    | |||||||||| |||||||||||||| || | |||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||    
T  26704316 ccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtaca 26704415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 26973862 - 26974152
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||| || |||||||||||||    
T  26973862 agcataggcagattacaacaacagtatgacatcatataacgatatcaaataaaa-cag-cagcatctcaatcattcattcatagttcaagtaatgcaatt 26973959  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    ||           ||| |||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  26973960 aa-----------cattatattcaacactaacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccat 26974048  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    | |||||||||| |||||||||||||| || | |||| ||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||    
T  26974049 ccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtaca 26974148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 23512152 - 23512460
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa-----tttaagtaatg 102  Q
    |||||||||||||  ||  |||| ||||||||| ||||| |||||||||||||| || |||||||||||||||||||||||| |     || ||||||||    
T  23512152 agcataggcagatcgcatcaacattatgacatcgtataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacattttcaagtaatg 23512251  T
Q  103 caattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaaggg 202  Q
    ||||||| ||| |||| |||||||||||||||||||||| | |||| | ||||| |||||| ||| || ||||||||||||||  | |||||||||||||    
T  23512252 caattaaacatcatattacatcatattcaacattaacattttataagatcttcaaagattgcagtaaacttcttatataggtcataatactacccaaggg 23512351  T
Q  203 tccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcga 302  Q
    |||| ||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  23512352 tccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcga 23512451  T
Q  303 gtacaagcc 311  Q
    |||||||||    
T  23512452 gtacaagcc 23512460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 93 - 304
Target Start/End: Original strand, 21873385 - 21873595
Alignment:
Q  93 ttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattac 192  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||||| ||||||    
T  21873385 ttaagtaatgcacataa-cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattac 21873483  T
Q  193 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctc 292  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||    
T  21873484 tacccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcgagagcatctgctc 21873583  T
Q  293 gccatggcgagt 304  Q
    ||||||||||||    
T  21873584 gccatggcgagt 21873595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 22032455 - 22032669
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||| |||||| |||||||||||||||||||||||    
T  22032455 aagtaatgca--taaacattataatacatcatattcaacacaaacatctcgtatcagcttcacagattgcagttaacttcttatataggtctcattacta 22032552  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || |||||||||||||||||||| | | || ||||| ||| ||| || |||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  22032553 cctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 22032652  T
Q  295 catggcgagtacaagcc 311  Q
    || ||||||||||||||    
T  22032653 cacggcgagtacaagcc 22032669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 18769984 - 18769770
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||||||||||  ||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||    
T  18769984 aagtaatgca--taaacattataatacatcatattcaacacaaacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattacta 18769887  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||||||||||| |||||||| | | || ||||||||| | | || ||||||||| |||||||||| |||||||| ||| |||||||||| |||||||    
T  18769886 cctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctcagttctggaagtgctcgcgacgcgagagcatctgctcgc 18769787  T
Q  295 catggcgagtacaagcc 311  Q
    || ||||||||||||||    
T  18769786 cacggcgagtacaagcc 18769770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 21366665 - 21366432
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| ||| | ||||||  ||||| |||||||| ||||   ||||||  ||||    
T  21366665 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagc-ttaacagttcatagcagcttcacagatctcagttaacatctt 21366567  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || || ||||||| ||||||||| |||||||| ||||    
T  21366566 aaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgag 21366467  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  21366466 gcgagagcatctgctcgccatggcgagtacaagcc 21366432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 23572218 - 23572432
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||| |||||   ||||||||||| || ||||| | |||| |||||| |||||||||||||||||||||||    
T  23572218 aagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcaacttcacaaattgcagttaacttcttatataggtctcattacta 23572315  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||||||||||| |||||||| | | || ||  ||||| ||| || |||||||||||||||||||| |||||| | |||||||||||||| |||||||    
T  23572316 cctaagggtccatccctaatcaattcaagcaacttagatcacaacattctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcgc 23572415  T
Q  295 catggcgagtacaagcc 311  Q
    ||||| |||||||||||    
T  23572416 catggggagtacaagcc 23572432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 147 - 311
Target Start/End: Original strand, 20805736 - 20805900
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||| ||| |||||  ||||||  ||||| ||||||| |||||||||| ||||||| | | |||||||| || ||||||||||||||||| ||||| |    
T  20805736 aacagcctcacagatttcagttaacatcttaaataggtcacattactacctaagggtcaaaccctaatcaatttgtgcgacacagatcgcaacatcctaa 20805835  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
     ||||| ||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  20805836 tttgcattcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 20805900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 17410715 - 17410786
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17410715 atcctcaagtgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 17410786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 18356595 - 18356666
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  18356595 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 18356666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 20910638 - 20910567
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  20910638 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 20910567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 17918979 - 17918918
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17918979 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 17918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 20232828 - 20232889
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  20232828 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 20232889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 21340595 - 21340534
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  21340595 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 21340534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 24532876 - 24532815
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  24532876 gcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 24532815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 26665959 - 26665898
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  26665959 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 26665898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 26937556 - 26937495
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  26937556 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 26937495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 16674430 - 16674490
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  16674430 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagc 16674490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 311
Target Start/End: Original strand, 23451532 - 23451696
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||| ||| |||||  ||||||  ||||| |||||||||| ||||||| || | |||||  |||||||| | |  | || ||| || ||| || ||||    
T  23451532 aacagcctcacagatttcagttaacatcttaaataggtctcactactacctaaagttccattcctaatcaattcaaacaactcaggtctcaacattctca 23451631  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
      |||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  23451632 aatgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcc 23451696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 311
Target Start/End: Original strand, 23463037 - 23463201
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||| ||| |||||  ||||||  ||||| |||||||||| ||||||| || | |||||  |||||||| | |  | || ||| || ||| || ||||    
T  23463037 aacagcctcacagatttcagttaacatcttaaataggtctcactactacctaaagttccattcctaatcaattcaaacaactcaggtctcaacattctca 23463136  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
      |||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  23463137 aatgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcc 23463201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 23535418 - 23535358
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  23535418 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 23535358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 42805698 - 42805759
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  42805698 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagcc 42805759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 12028393 - 12028337
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  12028393 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 12028337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 21885016 - 21884956
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  21885016 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 21884956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 311
Target Start/End: Original strand, 23458776 - 23458940
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||| ||| |||||  ||||||  ||||| |||||||||| ||||||| || | |||||  |||||||| | |  | || ||| || ||| || ||||    
T  23458776 aacagcctcacagatttcagttaacatcttaaataggtctcactactacctaaagttccattcctaatcaattcaaacaactcaggtctcaacattctca 23458875  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
      |||||||||||||  |||||||  |||||||||||||| ||||||||||||||||||||||||    
T  23458876 aatgcactcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcc 23458940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 25229233 - 25229173
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  25229233 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 25229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 25293389 - 25293329
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  25293389 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 25293329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 26172743 - 26172803
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  26172743 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 26172803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 1858805 - 1858746
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaa 308  Q
    |||||||||||||| |||||||| |||||| ||||||| |||||||||||||||||||||    
T  1858805 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaa 1858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 123133 - 123076
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  123133 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 123076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 17718263 - 17718206
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  17718263 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 17718206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 18774482 - 18774543
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  18774482 gcacccagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 18774543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 21887124 - 21887177
Alignment:
Q  258 ttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  21887124 ttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 21887177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 26742574 - 26742513
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||||| || || ||||||||||||||  |||||||||||||||||||||||    
T  26742574 gcactcagttctgaaaatggtcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 26742513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 19472546 - 19472486
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  19472546 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 19472486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 20296127 - 20296187
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  20296127 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 20296187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 24222170 - 24222222
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  24222170 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 24222222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 26680868 - 26680924
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||| | |||||||||||||||||||    
T  26680868 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtac 26680924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 26952475 - 26952531
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||||||||| | |||||||||||||||||||    
T  26952475 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtac 26952531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 31342399 - 31342449
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||||||    
T  31342399 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagt 31342449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 4036499 - 4036559
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| |||||||| |||||   ||||||||||||||||||||||    
T  4036499 cactcagttctggaagtgctcgcgaggcgaaagcatcaactcgccatggcgagtacaagcc 4036559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 18784341 - 18784386
Alignment:
Q  266 gtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||    
T  18784341 gtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 18784386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 21295082 - 21295030
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  21295082 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 21295030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 22757414 - 22757458
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||    
T  22757414 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 22757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 25535275 - 25535327
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  25535275 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 25535327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 1096595 - 1096646
Alignment:
Q  83 cattcataatttaagtaatgcaattaatcattatatcacatcatattcaacat 135  Q
    ||||||||||| ||||||||||  ||| ||||||||||||||||| |||||||    
T  1096595 cattcataattcaagtaatgcatataa-cattatatcacatcataatcaacat 1096646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 15441773 - 15441721
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||| ||||||    
T  15441773 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcc 15441721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 21565858 - 21565894
Alignment:
Q  268 gctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    ||||||||||||||||| | |||||||||||||||||    
T  21565858 gctcacgaggcgagagcctctgctcgccatggcgagt 21565894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 24529375 - 24529435
Alignment:
Q  111 cattatatcacatcatattcaacattaacatctcat-aacagcttcatagattgtagttaa 170  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| ||||| |||||||    
T  24529375 cattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaa 24529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 18517 - 18219
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    |||||||||||||| ||| |||| ||||||| |  ||||||||||||||||||| ||     ||| |||||||||||||||||| | |||||||||||||    
T  18517 agcataggcagattgcaacaacagtatgacaactcataacgatatcaaataaaagca-----catttcaatcattcattcataactcaagtaatgcaatt 18423  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    | || ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  18422 attcgttaaatcacatcatattcaacattaacatttcataacagcttcacagattgtagttaacttcttaaataggtcacattactacccaggggtccat 18323  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||     
T  18322 ctctaatcaaattatgcgacacaaatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtact 18223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 187; Significance: 1e-101; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 14718 - 15025
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |    || |||||||||    
T  14718 agcataggcagatcacaacaacattatgacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgc 14817  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||| ||||||| ||||||||||||| | ||    
T  14818 aattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagt 14917  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  14918 ccatctctaatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 15017  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  15018 tacaagcc 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 23733 - 24040
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |    || |||||||||    
T  23733 agcataggcagatcacaacaacattatgacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgc 23832  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||| ||||||| ||||||||||||| | ||    
T  23833 aattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgt 23932  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||  ||    
T  23933 ccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaag 24032  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  24033 tacaagcc 24040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 39157 - 39464
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |    || |||||||||    
T  39157 agcataggcagatcacaacaacattatgacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgc 39256  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||| ||||||| ||||||||||||| | ||    
T  39257 aattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgt 39356  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||  ||    
T  39357 ccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaag 39456  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  39457 tacaagcc 39464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 6149 - 6456
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |    || ||| |||||    
T  6149 agcataggcagatcacaacaacattatgacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagaaatgc 6248  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||| ||||||| || |||||||||| || |    
T  6249 aattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttctttactacccagggat 6348  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| |||||||| ||||||||||||||||    
T  6349 ccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgag 6448  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  6449 tacaagcc 6456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 178; Significance: 5e-96; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 8 - 310
Target Start/End: Original strand, 3796 - 4093
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| |||||| ||| |||| |||||||||| |||||||||||||||||||    ||| ||||||||||| | |||||||| | |||||||||||||    
T  3796 agcatagacagattgcaacaacagtatgacatcacataacgatatcaaataaaa----gcaacatctcaatcacttattcataactcaagtaatgcaatt 3891  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||| ||||||| ||| ||||||||||||| |||||||||||||| |||||| | ||||| ||||||||||||| |||||||||||||||||||||    
T  3892 aatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccat 3991  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||    
T  3992 ctctaatcaaa-tatgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatggcgagtaca 4090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 8 - 310
Target Start/End: Original strand, 8227 - 8524
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt 107  Q
    ||||||| |||||| ||| |||| |||||||||| |||||||||||||||||||    ||| ||||||||||| | |||||||| | |||||||||||||    
T  8227 agcatagacagattgcaacaacagtatgacatcacataacgatatcaaataaaa----gcaacatctcaatcacttattcataactcaagtaatgcaatt 8322  T
Q  108 aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccat 207  Q
    |||||||| ||||||| ||| ||||||||||||| |||||||||||||| |||||| | ||||| ||||||||||||| |||||||||||||||||||||    
T  8323 aatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccat 8422  T
Q  208 ctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||    
T  8423 ctctaatcaaa-tatgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatggcgagtaca 8521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 11 - 304
Target Start/End: Original strand, 637 - 928
Alignment:
Q  11 ataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaatt-aa 109  Q
    |||| |||||||||| | || | |||||| | ||||| |||||||||||| |    || ||||||||||||||||| |||||| ||||| ||||||| ||    
T  637 atagacagattacaacagcagtttgacattacataacaatatcaaataaacaa---caacatctcaatcattcatttataattcaagtagtgcaatttaa 733  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatct 209  Q
    |||||| ||| |||||||||||||||||||||| | ||||||||||| |||||| |||||| |||||| |||||||||||||||||| ||||||||||||    
T  734 tcattaaatcgcatcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatct 833  T
Q  210 ctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  834 ctaatcaaattatgcgacacagatcgcaatatcctcatttacactcagttctggaagtgctcacgaggcgagaacatctgctcgccatggcgagt 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 159; Significance: 1e-84; HSPs: 4)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 34982 - 34676
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||| |||||| |||| |||| ||| ||||||||||| |||||||||||||| || |||||| ||||||||||||||||| |    || |||||||||    
T  34982 agcataagcagatcacaacaacattatcacatcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgc 34883  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||  |||||||||||||| |||||| ||||||  ||||||||||||| |||||||||||||||||    
T  34882 aattaatcattaaatcacattataatcaac-ttaacaattcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggt 34784  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    |||||||||| ||| ||||| |||| || ||||||| | |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  34783 ccatctctaaacaagttatgtgacaaaggtcgcaatgttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 34684  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  34683 tacaagcc 34676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 41411 - 41319
Alignment:
Q  219 ttatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  41411 ttatgcgacacagatcgcaaagttctcacttgcactcagttctaaaagtgctcacgaggtgaaagcatctgctcgccatggcgagtacaagcc 41319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 64131 - 64192
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  64131 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 64192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 76015 - 76076
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  76015 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 76076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 70 - 311
Target Start/End: Original strand, 174879 - 175120
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||| ||||||| |||||  |||||    
T  174879 catctcaatcattcattcataattcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataatagcttcacagatttcagtta 174978  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||| |||||| ||||||    
T  174979 acttcttatataggtctcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaagtgc 175078  T
Q  270 tcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || ||||| |||||||| ||||||| ||||||||||||||||    
T  175079 tcgcgaggtgagagcatctgctcgcaatggcgagtacaagcc 175120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 151; Significance: 7e-80; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 32493 - 32787
Alignment:
Q  12 taggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaatc 111  Q
    |||||||||| |||  ||| |||||||||| |||||||||||||||||||    ||| |||||||||||||||||||||| | |||||||||||||||||    
T  32493 taggcagattgcaatgacagtatgacatcacataacgatatcaaataaaa----gcaacatctcaatcattcattcataactcaagtaatgcaattaatc 32588  T
Q  112 attatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctct 211  Q
    |||| ||||||| ||| ||||||||||||| |||||||||||||| |||||| | ||||  | ||| | ||||| | |||||||||| ||||||| ||||    
T  32589 attaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaacattttaaa-aggtcactttactacccaggggtccaactct 32687  T
Q  212 aatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||  |||| ||||||||||||    
T  32688 aaacaaattatgcgacacagatcgcgatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcaacatgtcgagtacaagcc 32787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 8778 - 8838
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  8778 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 8838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 74 - 311
Target Start/End: Complemental strand, 48464 - 48226
Alignment:
Q  74 tcaatcattcattcataatttaagtaatgcaatt-aatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatt 172  Q
    |||||||||||||||||||| ||||  ||||||| ||| |||| ||||| ||||||||||| |||||||| || |||||||||| | |||| | |||| |    
T  48464 tcaatcattcattcataattcaagtggtgcaatttaattattaaatcacgtcatattcaactttaacatcacacaacagcttcacatattgcatttaact 48365  T
Q  173 tcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctca 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||     
T  48364 tcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttacttgcactcagttctggaagtgctcg 48265  T
Q  273 cgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  48264 cgaggcgagagcatctgctcgccatggcgagtacaagcc 48226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 70 - 311
Target Start/End: Complemental strand, 16355 - 16115
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  ||||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  16355 catcttaatcattcaataatatcttaagtaatgcacataa-cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagtta 16257  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  16256 acttcttatataggtcatattactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgc 16157  T
Q  270 tcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || ||||||||| |||| ||||||||||||||||||||||||    
T  16156 tcgcgaggcgagggcatctgctcgccatggcgagtacaagcc 16115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 14149 - 13843
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgc 103  Q
    |||||| |||||| |||| |||| ||||||||||||||| |||||||||| ||| || |||||| ||||||||||||||||| |    || ||||||| |    
T  14149 agcataagcagatcacaacaacattatgacatcatataaagatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaattc 14050  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||| |||||  ||||||  || ||||||||||   |||||||||||||||    
T  14049 aattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcacagatttcagttaacatcctatataggtcattttactacccaagggt 13951  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    || |||||||  || ||||||||||||| ||||||  | |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  13950 ccttctctaaataagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 13851  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  13850 tacaagcc 13843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 17221 - 17152
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    ||||||||  || ||||||||||| |||||||||  |||| ||||||||||||||||| ||||||| ||||    
T  17221 catctcaagtatacattcataattcaagtaatgcgtttaa-cattatatcacatcataatcaacatcaaca 17152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 7150 - 6844
Alignment:
Q  8 agcataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataat----ttaagtaatgc 103  Q
    |||| |||||||| |||| |||| |||||||||||| || ||||||||||| |  ||   |||| ||||||||||||||||| |     | |||||||||    
T  7150 agcacaggcagatcacaacaacattatgacatcatacaaagatatcaaatagaggcaaatatcaactcaatcattcattcattaacatctcaagtaatgc 7051  T
Q  104 aattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggt 203  Q
    |||||||||||| ||| ||| ||| ||| | ||||||| |||||||||||||| |||||| ||||||  ||||||||||||| |||||||||| |||||     
T  7050 aattaatcattaaatctcattataatcagc-ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggc 6952  T
Q  204 ccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgag 303  Q
    ||||| |||||||| | |||||||||||||||||| || |||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  6951 ccatccctaatcaactcatgcgacacagatcgcaacattctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgag 6852  T
Q  304 tacaagcc 311  Q
    ||||||||    
T  6851 tacaagcc 6844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 10 - 311
Target Start/End: Complemental strand, 5004 - 4699
Alignment:
Q  10 cataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaa 105  Q
    |||||| |||| |||| |||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |    || ||||| ||| |    
T  5004 catagggagatcacaacaacattatgacatcatataaggatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtattgcca 4905  T
Q  106 ttaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtcc 205  Q
     ||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||| ||| || ||||||||||||||  | | ||||||||| ||||    
T  4904 ataaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtcc 4805  T
Q  206 atctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagta 305  Q
    | |||| |||||||||||||||||| |||||||| |||||| |||||||| ||| || || ||||| |||||||||||||| | ||| ||||| ||||||    
T  4804 acctctgatcaaattatgcgacacaaatcgcaatgtcctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatgacgagta 4705  T
Q  306 caagcc 311  Q
    ||||||    
T  4704 caagcc 4699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 23899 - 24094
Alignment:
Q  10 cataggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataatttaagtaatgcaattaa 109  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||| || |||||||| ||||||    
T  23899 cataggcagattacaacaacagtatgacatcatataacaatatcaaataaaa-cag-caacatctcaatcattcattcatagttcaagtaatgaaattaa 23996  T
Q  110 tcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatc 208  Q
     |||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  23997 -cattatatcacatcatattcaacactaacatctcttaacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatc 24094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 26707 - 26754
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  26707 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 26754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 46726 - 46493
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| ||||| ||| ||| |||||||||||||| |||||| |||||| |||||    
T  46726 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttagcatttcataacagcttcacagattgcagttaacttctt 46628  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    ||||||||| |||||||||| ||| ||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||    
T  46627 atataggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgag 46528  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    | |||||||| || || ||||||||||||||||||    
T  46527 gagagagcatttggtcaccatggcgagtacaagcc 46493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 271
Target Start/End: Complemental strand, 1233 - 1033
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  |||| |||||||  ||| |||||||||||||||||||||||||||| || ||||||||||||||  ||||| |||||    
T  1233 catcttaatcattcaataatatcttaaataatgcacataa-cattatatcacatcatattcaacattaatatttcataacagcttcactgattgcagtta 1135  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1134 acttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgc 1035  T
Q  270 tc 271  Q
    ||    
T  1034 tc 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 26962 - 27176
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||| ||||||  |||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||    
T  26962 aagtaatgca--taaacattataatacatcataatcaacacaaacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattacta 27059  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||||| || ||||  |||||| ||||||| |||||||    
T  27060 cccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaagagcatctgctcgc 27159  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||| ||||||||    
T  27160 catggcgaatacaagcc 27176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 311
Target Start/End: Original strand, 2893 - 3192
Alignment:
Q  15 gcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaattaat 110  Q
    |||||| |||| |||  ||||||||||||||| ||||||||||| || || | |||| ||||||||||||||||| |    || ||||||||||||||||    
T  2893 gcagatcacaacaactttatgacatcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaat 2992  T
Q  111 cattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctc 210  Q
    ||||| ||||||| ||| ||| | ||||||| |||||||||||||| |||||| | ||||  || |||||||||| || ||||||| ||| ||||| | |    
T  2993 cattaaatcacattataatcagc-ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccc 3091  T
Q  211 taatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||||| |||||||||||||||| ||| |||||  |||||| ||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||    
T  3092 taatcaatttatgcgacacagatcacaacatcctatcttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagc 3191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 15 - 311
Target Start/End: Original strand, 6559 - 6858
Alignment:
Q  15 gcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaattaat 110  Q
    |||||| |||| |||  ||||||||||||||| ||||||||||| || || | |||| ||||||||||||||||| |    || ||||||||||||||||    
T  6559 gcagatcacaacaactttatgacatcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaat 6658  T
Q  111 cattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctc 210  Q
    ||||| ||||||| ||| ||| | ||||||| |||||||||||||| |||||| | ||||  || |||||||||| || ||||||| ||| ||||| | |    
T  6659 cattaaatcacattataatcagc-ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccc 6757  T
Q  211 taatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||||| |||||||||||||||| ||| |||||  |||||| ||||||||| |||||||| |||||||||||||| ||||||||||||  |||||||||    
T  6758 taatcaatttatgcgacacagatcacaacatcctatcttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagc 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 70 - 311
Target Start/End: Complemental strand, 23672 - 23433
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  ||||||||||||  ||| | ||||||||||||||||||||||||||||| |||||||||||||| |||||| |  ||    
T  23672 catcttaatcattcaataatatcttaagtaatgcacataa-cgttatatcacatcatattcaacattaacatttcataacagcttcacagattgcaacta 23574  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | ||||| |||||||| |||||||||||||||||||| |  |||||||||||||||||| |||||||||  | |||||||||||||||||||  ||||||    
T  23573 acttctt-tataggtcacattactacccaagggtccaacattaatcaaattatgcgacaaagatcgcaaagttctcacttgcactcagttctagaagtgc 23475  T
Q  270 tcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    || |||||||||||||| |||||||||||||||| |||||||    
T  23474 tcgcgaggcgagagcatctgctcgccatggcgagaacaagcc 23433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 70 - 271
Target Start/End: Complemental strand, 38485 - 38285
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagtta 169  Q
    ||||| ||||||||| | |||  ||||||||||||  ||| | ||||||||||||||||||||||||||||| |||||||||||||| |||||| |  ||    
T  38485 catcttaatcattcaataatatcttaagtaatgcacataa-cgttatatcacatcatattcaacattaacatttcataacagcttcacagattgcaacta 38387  T
Q  170 atttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgc 269  Q
    | |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||  | |||||||||||| ||||||| ||||||    
T  38386 acttcttatataggtcacattactacccaagggtccaactctaatcaaattatgcgacacagatcgcaaagttctcacttgcacttagttctggaagtgc 38287  T
Q  270 tc 271  Q
    ||    
T  38286 tc 38285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 18655 - 18422
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||| |||||||||||| ||||||| ||| ||||||| | ||| |||||||||||||| |||||| |||||| |||||    
T  18655 atcattcaataatatttcaagtaatggaattaatcattaaatcacattataatcaacat-accatttcataacagcttcacagattgcagttaacttctt 18557  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    |||||||||||||||||||| ||||||||||| | |||||| | | || ||||||| | | | || |||||||||||||||||||| |||||||| ||||    
T  18556 atataggtctcattactacctaagggtccatcccaaatcaattgaagcaacacagaacacgacattctcacttgcactcagttctggaagtgctcgcgag 18457  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  18456 gcgagagcatctgctcgccatggcgagtacaagcc 18422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 21786 - 21572
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  ||||| || ||||||  |||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  21786 aagtaatgca--taaacattataatacatcttaatcaacacaaacatctcataacagcttcacagattgcagttaacatcttatataggtctcattacta 21689  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||||||||||| |||| ||| | | || ||||||||| ||| || |||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  21688 cctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 21589  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  21588 catggcgagtacaagcc 21572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 29678 - 29464
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  ||||| || ||||||  |||||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  29678 aagtaatgca--taaacattataatacatcttaatcaacacaaacatctcataacagcttcacagattgcagttaacatcttatataggtctcattacta 29581  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||||||||||| |||| ||| | | || ||||||||| ||| || |||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  29580 cctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 29481  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  29480 catggcgagtacaagcc 29464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 21568 - 21335
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||| ||||||||||||| ||||||| ||| ||| | ||||||  ||||| |||||||| | |||  ||||||  ||||    
T  21568 atcattcaataatatttcaagtaatacaattaatcattaaatcacattataatcagc-ttaacagttcatagcagcttcacaaatttcagttaacatctt 21470  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||| ||||||||| |||||||| ||||    
T  21469 aaataggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgag 21370  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||| ||||||||||||||    
T  21369 gcgagagcatctgctcgccacggcgagtacaagcc 21335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 2015 - 2229
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  ||||||||| ||||   ||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||    
T  2015 aagtaatgca--taaacattataatacatcatatccaacgcaaacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattacta 2112  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||||||||||| |||||||| | | || |||||||||  || || |||||||||||||||||||  |||||||| |||||||||||||| |||||||    
T  2113 cctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactcagttctcgaagtgctcgcgaggcgagagcatctgctcgc 2212  T
Q  295 catggcgagtacaagcc 311  Q
    || ||||||||||||||    
T  2213 cacggcgagtacaagcc 2229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 15642 - 15754
Alignment:
Q  199 agggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  15642 agggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatg 15741  T
Q  299 gcgagtacaagcc 311  Q
    |||||||||||||    
T  15742 gcgagtacaagcc 15754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 277 - 510
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||||||| |||||| ||||||| ||| ||||| ||||||  |||||||||||||| |||||   |||||  ||||    
T  277 atcattcaataatatttcaagtaatgcaattagtcattaaatcacattataatcaac-ttaacagttcataacagcttcacagatttccgttaacatctt 375  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    |  |||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||  |||||||| ||||||||||||||||  |||||||  ||||    
T  376 aattaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaacttgcactcagttctagaagtgcttgcgag 475  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    | |||||||| | ||||||||||||||||||||||    
T  476 gagagagcatctactcgccatggcgagtacaagcc 510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 1610 - 1843
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| ||| | ||||||  ||||| |||||||| ||||   ||||||  ||||    
T  1610 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagc-ttaacagttcatagcagcttcacagatctcagttaacatctt 1708  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||| | |||||||| |||||| | ||||||||||| || || ||||||| ||||||||| |||||||| ||||    
T  1709 aaataggtcacattactacctaagggtccaaccctaatcaatttatgcaaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgag 1808  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  1809 gcgagagcatctgctcgccatggcgagtacaagcc 1843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 6308 - 6075
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||||||||| |||| ||||||  |||  |||| ||||||| |||||| ||||||| |||||| | ||||  || |    
T  6308 atcattcaataatatttcaagtaatgcaattaataattaaatcacaatataaacaac-ttaacatttcataatagcttcacagattgcatttaacatcct 6210  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | |||| || |||||||||  | |||||||||||||||||| ||||||||||||  |||||| ||||||||||||| ||| ||||| |||||||| ||||    
T  6209 aaatagatcacattactacttaggggtccatctctaatcaagttatgcgacacaagtcgcaacatcctcacttgcattcaattctggaagtgctcgcgag 6110  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  6109 gcgagagcatctgctcgccatggcgagtacaagcc 6075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 7429 - 7643
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  ||||||||||||||   ||||||||||| ||| ||||||||||| |||||| |||||||||||||||||||||||    
T  7429 aagtaatgca--taaacattataatacatcatattcaacgcaaacatctcatatcagtttcatagattgcagttaacttcttatataggtctcattacta 7526  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || ||||||||||| |||||||| | | || | ||| ||| | | || ||||||||||||||||| || |||||||| |||||||||||||| |||||||    
T  7527 cctaagggtccatccctaatcaattcaagcaatacaaatcactacattctcacttgcactcagttttggaagtgctcgcgaggcgagagcatttgctcgc 7626  T
Q  295 catggcgagtacaagcc 311  Q
    || ||||||| ||||||    
T  7627 cacggcgagtccaagcc 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 510 - 743
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||| |||||||||| ||||||| ||| ||| | ||||||  |||||  ||||||| ||||   | ||||  ||||    
T  510 atcattcaataatatttcaagtaatgcatttaatcattaaatcacattataatcagc-ttaacagttcatagtagcttcacagatctcaattaacatctt 608  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||||| ||||||||||| | |||||| |||||||| ||||||||||| ||||| ||||||| ||||||||| |||||||| ||||    
T  609 aaataggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgag 708  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||| ||||||||||||||||||    
T  709 gcgagagcatctgctcaccatggcgagtacaagcc 743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 6346 - 6182
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||||||| | |||  ||||||  ||||| ||||||| |||||||||| ||||||||| | |||||||| |||||||| ||| ||||||||||||| |    
T  6346 aacagcttcacatatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaa 6247  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6246 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 6182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 143 - 310
Target Start/End: Complemental strand, 2018 - 1851
Alignment:
Q  143 tcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatc 242  Q
    |||||||||||||| | |||  ||||||| ||||| ||||||| |||||||||| ||||||||| | |||||| | | |||||||||||||| ||| ||     
T  2018 tcataacagcttcacatatttcagttaatatcttaaataggtcacattactacctaagggtccaaccctaatcgattcatgcgacacagatcacaacatt 1919  T
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    |||| ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  1918 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagc 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 86; Significance: 4e-41; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 12897 - 13111
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    ||||||||||  ||| |||||||  |||||||| |||||   |||||||||||  ||||||| | |||| |||||| |||||||||||||||||||||||    
T  12897 aagtaatgca--taaacattataatacatcataatcaactccaacatctcatattagcttcacaaattgcagttaacttcttatataggtctcattacta 12994  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || |||||||||||  ||||||| | | || || || ||| ||| || |||| ||||||||||||||| |||||||| |||||||||||||| |||||||    
T  12995 cctaagggtccatccataatcaattcaagcaactcatatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 13094  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||| ||||    
T  13095 catggcgagtacgagcc 13111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 61439 - 61379
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  61439 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 61379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 65348 - 65295
Alignment:
Q  258 ttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| |||||||| |||||||||||||| |||||||| |||||| ||||||||    
T  65348 ttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgaatacaagcc 65295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 15203 - 15436
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || ||||||||||||||||||||| ||||||| ||| ||||| ||||| | | |||||||||||| |||||| ||||||  ||||    
T  15203 atcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaactttttataacagcttcacagattgcagttaacatctt 15301  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    ||| |||||||| ||||||| || | |||||  | |||||| | | || || ||| ||  || || ||||  ||||||||||||||||||||||| ||||    
T  15302 ataaaggtctcactactacctaaagttccattccaaatcaattaaagcaactcaggtcaaaacattctcaaatgcactcagttctgaaagtgctcgcgag 15401  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  15402 gcgagagcatctgctcgccatggcgagtacaagcc 15436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 95 - 310
Target Start/End: Original strand, 4565 - 4779
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    |||||||||||||||||| || ||||||| ||| ||||| ||| ||| |||||| || |||| || ||  |||||| ||||||||||||||||| |||||    
T  4565 aagtaatgcaattaatcaataaatcacattataatcaac-ttagcatttcataatagtttcacagtttacagttaacttcttatataggtctcactacta 4663  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || || | |||||  |||||||| | |  | |||||| || ||| || |||||||| ||||||||||| |||||||| |||||||||||||| |||||||    
T  4664 cctaaagttccattcctaatcaattcaaacaacacagttcacaacattctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 4763  T
Q  295 catggcgagtacaagc 310  Q
    ||||||||||||||||    
T  4764 catggcgagtacaagc 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 147 - 311
Target Start/End: Original strand, 1082 - 1246
Alignment:
Q  147 aacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctca 246  Q
    |||||| ||| |||||  ||||||  ||||| ||||||| |||||||||  ||||||||| | |||||||| || ||||||||||||||||| ||||| |    
T  1082 aacagcctcacagatttcagttaacatcttaaataggtcacattactacttaagggtccaaccctaatcaatttgtgcgacacagatcgcaacatcctaa 1181  T
Q  247 cttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
     ||||| ||||||||  |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  1182 tttgcattcagttctagaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagcc 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 311
Target Start/End: Complemental strand, 19273 - 19058
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    |||||||||||||||||| || ||||||||||| ||| | |||| |  |||||||||||||| |||||  | ||||  |||||||||||||||| |||||    
T  19273 aagtaatgcaattaatcaataaatcacatcataatcagc-ttaatagttcataacagcttcacagatttcatttaacatcttatataggtctcactacta 19175  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || || | |||||  |||||||| | |  | || ||| || | | || ||||  |||||||||||||| |||||||| |||||||||||||| | |||||    
T  19174 cctaatgttccattcctaatcaattcaatcaactcaggtcacgacattctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgc 19075  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  19074 catggcgagtacaagcc 19058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 2041 - 2177
Alignment:
Q  173 tcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctca 272  Q
    ||||| ||||||| ||||||| || ||||||||| |||||||||| || ||||| ||||||||||| ||||  ||||| | |||||| || ||||||||     
T  2041 tcttaaataggtcacattactccctaagggtccaactctaatcaatttgtgcgaaacagatcgcaacatcccaacttgtattcagttatggaagtgctcg 2140  T
Q  273 cgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||||||||||||| | ||||||||||||||||||||    
T  2141 cgaggcgagagcatctactcgccatggcgagtacaag 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 9723 - 9859
Alignment:
Q  173 tcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctca 272  Q
    ||||| ||||||| ||||||| || ||||||||| |||||||||| || ||||| ||||||||||| ||||  ||||| | |||||| || ||||||||     
T  9723 tcttaaataggtcacattactccctaagggtccaactctaatcaatttgtgcgaaacagatcgcaacatcccaacttgtattcagttatggaagtgctcg 9822  T
Q  273 cgaggcgagagcatatgctcgccatggcgagtacaag 309  Q
    |||||||||||||| | ||||||||||||||||||||    
T  9823 cgaggcgagagcatctactcgccatggcgagtacaag 9859  T

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Target: scaffold0036 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 66414 - 66182
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | |||||| |||||||||||| ||||| || ||||||| ||| |||   ||| ||| |||||| ||||||| || |   ||||||| ||||    
T  66414 atcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatcac--ttagcatttcataatagcttcacagttctcagttaatatctt 66317  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||||||||| |||| || | ||| |  ||||||||   | || || ||| || ||| |||||||  |||||||||||||| |||||||| ||||    
T  66316 aaataggtctcattagtacctaaagttcctttcctaatcaatccaagcaactcaggtctcaaaatcctcaaatgcactcagttctggaagtgctcgcgag 66217  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||||||||||||||||||||    
T  66216 gcgagagcatctgctcgccatggcgagtacaagcc 66182  T

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Target: scaffold0574 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 7876 - 7755
Alignment:
Q  12 taggcagattacaagaacaatatgacatcatataacgatatcaaataaaaacaggcatcatctcaatcattcattcataa----tttaagtaatgcaatt 107  Q
    |||||||||||||| |||| |||||| |||| |||||||||||||||||| || ||||||||||||||| |||||||| |    || |||||||||||||    
T  7876 taggcagattacaacaacattatgacgtcatgtaacgatatcaaataaaagcaagcatcatctcaatcagtcattcattaacatttcaagtaatgcaatt 7777  T
Q  108 aatcattatatcacatcatatt 129  Q
    |||||| || ||||||||||||    
T  7776 aatcatcatctcacatcatatt 7755  T

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Target: scaffold0003 (Bit Score: 54; Significance: 5e-22; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 139988 - 140049
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  139988 gcactcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagcc 140049  T

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Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 96883 - 96945
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  96883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 96945  T

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Target: scaffold0003; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 71581 - 71652
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||| ||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  71581 atcctcaaatgcactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 71652  T

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Target: scaffold0003; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 306
Target Start/End: Complemental strand, 414039 - 413822
Alignment:
Q  88 ataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctc 187  Q
    |||||| |||||||||| |||||| ||| ||||||| | |  |||| ||||||  || ||||| ||||| |||||  ||||||  ||||||||| || ||    
T  414039 ataattcaagtaatgcatttaatcgttaaatcacattacaaacaac-ttaacagttcttaacaacttcacagattccagttaacatcttatatatgtttc 413941  T
Q  188 attactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcata 287  Q
     |||||||| |||| |||||  |||| |||   | || || ||| ||  || || |||| || || ||||||||| |||||||| ||||||||||||||     
T  413940 tttactacctaaggttccattcctaaccaatccaagcaactcaggtcataacattctcaattacattcagttctggaagtgctcgcgaggcgagagcatc 413841  T
Q  288 tgctcgccatggcgagtac 306  Q
    |||||||||||||||||||    
T  413840 tgctcgccatggcgagtac 413822  T

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Target: scaffold0483 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 311
Target Start/End: Original strand, 502 - 670
Alignment:
Q  143 tcataacagcttcatagattgtagttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatc 242  Q
    |||||||| ||||| |||||  | ||||  |||||||||||||||| ||||||| || | |||||  |||||||| | |  | || ||| || | | ||     
T  502 tcataacaacttcacagatttcatttaacatcttatataggtctcactactacctaatgttccattcctaatcaattcaatcaactcaggtcacgacatt 601  T
Q  243 ctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  602 ctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 670  T

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Target: scaffold0228 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 18470 - 18399
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  18470 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 18399  T

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Target: scaffold0168 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 3368 - 3297
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  3368 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 3297  T

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Target: scaffold0093 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 4768 - 4690
Alignment:
Q  113 ttatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattac 192  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| |||||| |||||| |||||||||||||| ||||||    
T  4768 ttatatcacatcatattcaacattaacatttcat-acagcttcacagattgcagttaacttcttatataggtcacattac 4690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 52; Significance: 8e-21; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 19456 - 19527
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  19456 atcctcatatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 19527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 13172 - 13243
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  ||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  13172 atcctcatatgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 13243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 62541 - 62599
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 62599  T

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Target: scaffold0009 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 228211 - 228140
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  228211 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 228140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 311
Target Start/End: Complemental strand, 1489 - 1256
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||||||| || |||  |||||| ||| ||| | ||||||  |||||||||||||| ||||   ||||||  ||||    
T  1489 atcattcaataatatttcaagtaatgcaattattcgttaagtcacattataatcagc-ttaacaattcataacagcttcacagatctcagttaacatctt 1391  T
Q  177 atataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgag 276  Q
    | ||||||| |||||||| | || | |||||  ||| ||||   | || || ||| || ||  || |||||||||||| ||||||| |||||||| ||||    
T  1390 aaataggtcacattactaactaaagttccattcctagtcaatccaagcaactcaggtctcatcattctcacttgcacttagttctggaagtgctcgcgag 1291  T
Q  277 gcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| ||||||| ||||||||||||||||    
T  1290 gcgagagcatctgctcgctatggcgagtacaagcc 1256  T

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Target: scaffold1220 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 2079 - 2141
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  2079 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 45395 - 45457
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  45395 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 45457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 38646 - 38586
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||  |||||||||||||||||||| || ||||||||||||||||||||||||    
T  38646 cactcaattcttgaagtgctcacgaggcgagaggatctgctcgccatggcgagtacaagcc 38586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 7222 - 7283
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||||||  |||||||||||||    
T  7222 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccaaagcgagtacaagcc 7283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 11129 - 11069
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| || || |||||||| |||||||||||||| |||||||||||| |||||||||||    
T  11129 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcc 11069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 207 - 268
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  207 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 268  T

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Target: scaffold0070 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 10181 - 10242
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  10181 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 56376 - 56436
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  56376 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 56436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 191102 - 191047
Alignment:
Q  256 agttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  191102 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 191047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 192812 - 192750
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| || |||| |||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  192812 tgcacttagatctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 192750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 13325 - 13254
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  13325 atcctcaaatgcactcagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagcc 13254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 15256 - 15185
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  |||||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||||    
T  15256 atcctcaaatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcc 15185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 173558 - 173629
Alignment:
Q  240 atcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||  ||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  173558 atcctcaaatgcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 173629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 422359 - 422303
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    |||||| |||||| |||||||| ||||  |||||||| |||||||||||||||||||    
T  422359 gcactctgttctggaagtgctcgcgagctgagagcatctgctcgccatggcgagtac 422303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 566 - 628
Alignment:
Q  248 ttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagc 310  Q
    ||||| ||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  566 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagc 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 3536 - 3443
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacatta--acatctcataacagcttcatagatt 162  Q
    ||||||||| || || |||||||| |||||||||   ||| ||||||||||||||||| ||||||| |  |||||| | ||||||||||||||||    
T  3536 catctcaattatacactcataattcaagtaatgcgtataa-cattatatcacatcataatcaacatcaacacatcttaaaacagcttcatagatt 3443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 2502 - 2440
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  2502 tgcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 2440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 9627 - 9675
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||    
T  9627 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtaca 9675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 30573 - 30511
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||    
T  30573 tgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtataagcc 30511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 2157 - 2215
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 2263 - 2202
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  2263 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 2202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 10123 - 10062
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  10123 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 11658 - 11719
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11658 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 11719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 4052 - 3995
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  4052 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 3995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 35338 - 35277
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||||||    
T  35338 gcactcagttctggaagtgctcgcgaggcgagagcatctcctcgccatggcgagtacaagcc 35277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 36583 - 36644
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  36583 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 36644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 5828 - 5767
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  5828 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 5767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 27945 - 28014
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    ||||||||  || ||||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| ||||    
T  27945 catctcaaatatacattcataattcaagtaatgcatataa-cattatatcacatcataatcaacatcaaca 28014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 19845 - 19784
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  19845 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagcc 19784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 16225 - 16319
Alignment:
Q  67 catcatctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagatt 162  Q
    |||||||||||  || ||||||||| | ||||||||||  ||| ||||||||||| ||||  ||||||| ||||||| | |||||||||| |||||    
T  16225 catcatctcaagtatacattcataactcaagtaatgcatataa-cattatatcacgtcatgatcaacatcaacatcttaaaacagcttcacagatt 16319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 24796 - 24735
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||    
T  24796 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacaagcc 24735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 23494 - 23555
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  23494 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcc 23555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 242344 - 242396
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  242344 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 5721 - 5935
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    |||||||||||||| |||||  ||||||| ||| ||| | ||||||  |||||||||||||| ||||   ||||||  ||||| ||||||| ||||||||    
T  5721 aagtaatgcaattattcatttaatcacattataatcagc-ttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattacta 5818  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || || |  ||||  ||||||||   | || || ||| ||  || ||| | | ||||| |||||| || |||||||| |||||||||||||| |||||||    
T  5819 cctaaagtcccattcctaatcaatccaagcaactcaggtcttaacatcttaatttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgc 5918  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  5919 catggcgagtacaagcc 5935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 311
Target Start/End: Original strand, 6916 - 7130
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttcttatataggtctcattacta 194  Q
    |||||||||||||| |||||  ||||||| ||| ||| | ||||||  |||||||||||||| ||||   ||||||  ||||| ||||||| ||||||||    
T  6916 aagtaatgcaattattcatttaatcacattataatcagc-ttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattacta 7013  T
Q  195 cccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgc 294  Q
    || || |  ||||  ||||||||   | || || ||| ||  || ||| | | ||||| |||||| || |||||||| |||||||||||||| |||||||    
T  7014 cctaaagtcccattcctaatcaatccaagcaactcaggtcttaacatcttaatttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgc 7113  T
Q  295 catggcgagtacaagcc 311  Q
    |||||||||||||||||    
T  7114 catggcgagtacaagcc 7130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 9701 - 9759
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagcc 9759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 635 - 692
Alignment:
Q  254 tcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||    
T  635 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagcc 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 210
Target Start/End: Original strand, 42739 - 42871
Alignment:
Q  77 atcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgtagttaatttctt 176  Q
    |||||||| | ||| || |||||||||| |||||||||| ||||||| | | ||| | ||||||  |||||||||||||| ||||   ||||||  ||||    
T  42739 atcattcaataatatttcaagtaatgcatttaatcattaaatcacattagaatcagc-ttaacagttcataacagcttcacagatctcagttaacatctt 42837  T
Q  177 atataggtctcattactacccaagggtccatctc 210  Q
    | ||||||| |||||||||| |||||||||||||    
T  42838 aaataggtcacattactacctaagggtccatctc 42871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 24461 - 24421
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    |||||||| |||||||||||| | |||||||||||||||||    
T  24461 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 24421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 192144 - 192083
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||| ||||| |||||||||||||||||||||||  |||||||| ||||||||||||||    
T  192144 gcactcaattctggaagtgctcacgaggcgagagcatcagctcgccacggcgagtacaagcc 192083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 9613 - 9673
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||||||| |||||||||||    
T  9613 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcc 9673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 4928 - 4868
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  4928 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 4868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 7098 - 7042
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| |||||||| |||||| ||||||| |||||||||||||||||||    
T  7098 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtac 7042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 15618 - 15676
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||| |||||||||||||| |||||||||| |||||||||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtacaagcc 15676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 16949 - 16891
Alignment:
Q  249 tgcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtaca 307  Q
    ||||||| |||||  |||||||| |||||||||||||| ||||||||||||||||||||    
T  16949 tgcactcggttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 16891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 6085 - 6024
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||||||  |||||||||||||    
T  6085 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccaaagcgagtacaagcc 6024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 2178 - 2238
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| || || |||||||| |||||||||||||| |||||||||||| |||||||||||    
T  2178 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcc 2238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 8849 - 8905
Alignment:
Q  250 gcactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtac 306  Q
    ||||||||||||| || ||||| |||||||||||||| | |||||||||||||||||    
T  8849 gcactcagttctggaaatgctcgcgaggcgagagcatctcctcgccatggcgagtac 8905  T

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Target: scaffold0141 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 39591 - 39765
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcat-aacagcttcatagattgtagtt 168  Q
    ||||||||  || ||||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| ||||  || | |||||||||||||||| || ||    
T  39591 catctcaaatatacattcataattcaagtaatgcacataa-cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataatt 39689  T
Q  169 aatttc-ttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcct 244  Q
    ||  || |||| || |||||| |||||||| | ||| || | || | ||| || ||||||||||||||||| |||||    
T  39690 aacatcattat-taagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcct 39765  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 75221 - 75047
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcat-aacagcttcatagattgtagtt 168  Q
    ||||||||  || ||||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| ||||  || | |||||||||||||||| || ||    
T  75221 catctcaaatatacattcataattcaagtaatgcacataa-cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataatt 75123  T
Q  169 aatttc-ttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcct 244  Q
    ||  || |||| || |||||| |||||||| | ||| || | || | ||| || ||||||||||||||||| |||||    
T  75122 aacatcattat-taagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcct 75047  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 58545 - 58485
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||  |||||||| |||||||||||||| |||||||| |||||||||||||||    
T  58545 cactcaattctagaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcc 58485  T

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Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 16488 - 16430
Alignment:
Q  253 ctcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| ||||| |||||||  ||||||||| |||| ||||||||||||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatggcgagtacaagcc 16430  T

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Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 51850 - 51789
Alignment:
Q  111 cattatatcacatcatat-tcaacattaacatctcataacagcttcatagattgtagttaat 171  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||| | |||||| |||||    
T  51850 cattatatcacatcataaatcaacattaatatctcataacagcttcacaaattgtaattaat 51789  T

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Target: scaffold0284 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 18633 - 18693
Alignment:
Q  251 cactcagttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||| | |||||| ||||||    
T  18633 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccttagcgagttcaagcc 18693  T

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Target: scaffold0138 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 30026 - 29974
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||    
T  30026 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcc 29974  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 26058 - 25979
Alignment:
Q  83 cattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcat-aacagcttcatagatt 162  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||| ||||||| ||||  || | ||||||||||||||||    
T  26058 cattcataattcaagtaatgcgtttaa-cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatt 25979  T

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Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 33488 - 33437
Alignment:
Q  83 cattcataatttaagtaatgcaattaatcattatatcacatcatattcaacat 135  Q
    ||||||||||| |||||||||  |||| ||||||||||||||||| |||||||    
T  33488 cattcataattcaagtaatgcgtttaa-cattatatcacatcataatcaacat 33437  T

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Target: scaffold0908 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 3192 - 3123
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacattaaca 140  Q
    ||||||||  || ||||||||||| |||||||||  |||| ||||||||||||||||| ||||||| ||||    
T  3192 catctcaagtatacattcataattcaagtaatgcgtttaa-cattatatcacatcataatcaacatcaaca 3123  T

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Target: scaffold0540 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 3157 - 3093
Alignment:
Q  70 catctcaatcattcattcataatttaagtaatgcaattaatcattatatcacatcatattcaacat 135  Q
    ||||||||  || ||||||||||| ||||||||||  ||| ||||||||||||||||| |||||||    
T  3157 catctcaaatatacattcataattcaagtaatgcatataa-cattatatcacatcataatcaacat 3093  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 18180 - 18127
Alignment:
Q  258 ttctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    ||||| |||||||| ||||| ||||||||  ||||||||| |||||||||||||    
T  18180 ttctggaagtgctcgcgaggtgagagcatcagctcgccatagcgagtacaagcc 18127  T

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Target: scaffold0292 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 3610 - 3677
Alignment:
Q  95 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcat-aacagcttcatagatt 162  Q
    ||||||||||| ||| ||||||||||||||||| ||||||| ||||  || | ||||||||||||||||    
T  3610 aagtaatgcaaataa-cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatt 3677  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 10464 - 10516
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||| ||||||    
T  10464 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcc 10516  T

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Target: scaffold0233 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 14359 - 14307
Alignment:
Q  259 tctgaaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagcc 311  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||| ||||||    
T  14359 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcc 14307  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 10221 - 10261
Alignment:
Q  264 aagtgctcacgaggcgagagcatatgctcgccatggcgagt 304  Q
    |||||||| |||||||||||| | |||||||||||||||||    
T  10221 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 10261  T

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