View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10111_low_23 (Length: 299)
Name: NF10111_low_23
Description: NF10111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10111_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 12720067 - 12720337
Alignment:
| Q |
17 |
agtattattattagcactggttagagttccatttcctcctttggtaatattttgaacaagaacttcacccatactttcaccaataccttcaacaaaccca |
116 |
Q |
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| T |
12720067 |
agtattattattagcactggttagagttccatttcctcctttggtaatattttgaacaagaacttcacccatactttcaccaataccttcaacaaaccca |
12720166 |
T |
|
| Q |
117 |
ccaataaattcaatcacaacttgagaagcaactttagcagcagcagaaagaacacttcctttttcaggaagcctaataccattagcttgaagaccattaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
12720167 |
ccaataaattcaatcacaacttgagaagcaactttagcagcagcagaaagaacacttggtttttcaggaagcctaataccattagcttgaagaccattaa |
12720266 |
T |
|
| Q |
217 |
ctttattcttagcacaaaatgcatgaagattgtagttacacaccgtgcaccgatacactttccccgacctt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12720267 |
ctttattcttagcacaaaatgcatgaagattgtagttacacaccgtgcaccgatacactttccccgacctt |
12720337 |
T |
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