View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10111_low_8 (Length: 441)
Name: NF10111_low_8
Description: NF10111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10111_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 5 - 425
Target Start/End: Original strand, 24045775 - 24046196
Alignment:
| Q |
5 |
ggaatccacaatcacaaa-gcaaaatgatatgaagaagataagtgggaccaatagtatcacaaaccattacgaaccttacaatctcttttccttcagtac |
103 |
Q |
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| T |
24045775 |
ggaatccacaatcacaaaagcaaaatgatatgaagaagataagtgggaccaatagtatcacaaaccattacgaaccttacaatctcttttccttcagtac |
24045874 |
T |
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| Q |
104 |
cttacaacacaatccatccatgcaactcattcacccctagaaacacactagtgcaaatttcaacaaaaatggttgcaatggcagcagcaacagcatcatc |
203 |
Q |
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| T |
24045875 |
cttacaacacaatccatccatgcaactcattcaccactagaaacacactagtgcaaatttcaacaaaaatggttgcaatggcagcagcaacagcatcatc |
24045974 |
T |
|
| Q |
204 |
acaattaatattctcaaaaccttgttctccctcacgtctatgtcccttccaactttgtgttttcgacacgaaatcagtgttatcaagttcaagaagaaag |
303 |
Q |
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| T |
24045975 |
acaattaatattctcaaaaccttgttctccctcacgtctatgtcccttccaactttgtgttttcgacacgaaatcagtgttatcaagttcaagaagaaag |
24046074 |
T |
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| Q |
304 |
catgtgagtggctctggaggagtgagatgcatggctattggtgaagtagctgctgagacaaagaaaagaagtagttatgagcttataacattgactagtt |
403 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24046075 |
catgtgagtggctctggaggagtgagatgcatggctgttggtgaagtagctgctgagacaaagaaaagaagtagttatgagcttataacattgactagtt |
24046174 |
T |
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| Q |
404 |
ggttgttgaagcaagaacaaac |
425 |
Q |
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| T |
24046175 |
ggttgttgaagcaagaacaaac |
24046196 |
T |
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