View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10112_low_18 (Length: 261)
Name: NF10112_low_18
Description: NF10112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10112_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 45043056 - 45043300
Alignment:
| Q |
1 |
tgccaattgatatgctaaccgaaaagggaaattaaatattgtatcaaataagatactaatattattatgagaaaacaatatagtagttcaacatccaagc |
100 |
Q |
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| T |
45043056 |
tgccaattgatatgctaaccaaaaagggaaattaaatattgtatcaaataagatactaatattattatgagaaaacaatatagtagttcaacatccaagc |
45043155 |
T |
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| Q |
101 |
tnnnnnnnntccccagat-aaaagaagggatctctaatcaaaattttcctaaaaggggaaataattaaaacgagataaaagatcatcctactacnnnnnn |
199 |
Q |
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| T |
45043156 |
taaaaaaaatccccagataaaaaaaagggatctctaatcaaaattttcctaaaaggggaaa----taaaacgagataaaagatcatcctactacaaaaaa |
45043251 |
T |
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| Q |
200 |
ngtagatctgaagtacggaatggaaaatgcagaaccaaaagttcagata |
248 |
Q |
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| T |
45043252 |
agtagatctgaagtacggaatggaaaatgcagaaccaaaagttcagata |
45043300 |
T |
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