View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10112_low_23 (Length: 241)
Name: NF10112_low_23
Description: NF10112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10112_low_23 |
 | |
|
| [»] scaffold0024 (3 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 2952290 - 2952080
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgagg |
100 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |
|
|
| T |
2952290 |
cataatcagcaatatatgactcctcagggtaatgacactgctccaaagcaaccatattccgaaataaagtttcggttgaatcctgaacttttaattgagg |
2952191 |
T |
|
| Q |
101 |
aatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactc |
200 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2952190 |
aatttcaagaactccttccgaaaacctcaagtcaagtaaacacttactttcagtgttcactttaaacctaactccagcttctaacaactcagttgcactc |
2952091 |
T |
|
| Q |
201 |
ggtggatgttt |
211 |
Q |
| |
|
||| ||||||| |
|
|
| T |
2952090 |
ggtagatgttt |
2952080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 3003530 - 3003723
Alignment:
| Q |
26 |
agggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaac |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3003530 |
agggtaatgacactgctccaaagcaaccatattccgaaataaagtttcggtcgaatccgcaactaataattgaggaatttcaagaactcctcccgaaaac |
3003629 |
T |
|
| Q |
126 |
cttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactcggtggatgtttcacccatt |
219 |
Q |
| |
|
|| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3003630 |
ctcaagtcaagtaaacacttactttcagtgttcactttaaatctaactccagcttctaacaactcagttgcactcggtggatgtttcatccatt |
3003723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 2927492 - 2927307
Alignment:
| Q |
26 |
agggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaac |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2927492 |
agggtaatgacactgctccaaagcaaccatattccgtaataaagtttcagtcgaatcctgaacttttaattgaggaatttcaagaactcctcccgaaaac |
2927393 |
T |
|
| Q |
126 |
cttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactcggtggatgttt |
211 |
Q |
| |
|
|| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2927392 |
ctcaagtcaagtaaacacttactttcagtgttcactttaaacctaactccagcttctaacaactcagttgcactcggtagatgttt |
2927307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 2937817 - 2937609
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgagg |
100 |
Q |
| |
|
||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||| |||||||||| |
|
|
| T |
2937817 |
cataatcagcaatatatgactcatgagggtaatgacactgctccaaagcaaccatattccaaaacaaaatttcggtcgaatcctcaactgttaattgagg |
2937718 |
T |
|
| Q |
101 |
aatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactc |
200 |
Q |
| |
|
|||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2937717 |
aatttcaagaactcctcctgaaaatctcaagtcaagtaaacaattactttcagtgttcactttaaacctaactccagcttctaacaactcagttgcactc |
2937618 |
T |
|
| Q |
201 |
ggtggatgt |
209 |
Q |
| |
|
||| ||||| |
|
|
| T |
2937617 |
ggtagatgt |
2937609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 2974339 - 2974156
Alignment:
| Q |
26 |
agggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaac |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2974339 |
agggtaatgacactgctccaaagcaaccatattccgaaacaaaatttcggtcccatcttgaactgttaattgaggaatttcaagaactcctcccgaaaac |
2974240 |
T |
|
| Q |
126 |
cttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactcggtggatgt |
209 |
Q |
| |
|
|| |||||| ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2974239 |
ctcaagtcatgtaaacattcacttttagtgttcactttaaacctaactccagcttctaacaactcagttgcactcggtagatgt |
2974156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 2964866 - 2964658
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgagg |
100 |
Q |
| |
|
|||| |||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||| | |||||||||| ||| | || |||||||||| |
|
|
| T |
2964866 |
catagtcagtaatatatgactcataagggtaacgacactgctccaaagcaaccatattccgaaacataatttcggtcccatcgtgagctattaattgagg |
2964767 |
T |
|
| Q |
101 |
aatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactc |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2964766 |
aatttcaagaactcctcccgaaaacctcaagtcaagtaaacacttactttcagtgttcactttaaacctaactccagcttctaacaactcagttgcacta |
2964667 |
T |
|
| Q |
201 |
ggtggatgt |
209 |
Q |
| |
|
||| ||||| |
|
|
| T |
2964666 |
ggtagatgt |
2964658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 2929666 - 2929467
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgagg |
100 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||| ||||||||||||||| |||||||| ||||||| |||||||| ||| | |||| |||||||||| |
|
|
| T |
2929666 |
cataatcaagaatatatgactcatgagggtaatgaaactgctccaaagcaatcatattccaaaataaagtttcggtcccatctgcaactgttaattgagg |
2929567 |
T |
|
| Q |
101 |
aatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactc |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2929566 |
aatttcaagaactcctcctgaaaaccttaagtcaagtaaacacttacttttagtgttcactttaaacctaactccagcttctaacaactcagttgcactc |
2929467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 2934931 - 2934759
Alignment:
| Q |
26 |
agggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaac |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2934931 |
agggtaatgacactgctccaaagcaaccatatttcgaaacgaaatttcagtcctatcgtcaaccgttaattgaggaatttcaagaactcctcccgaaaac |
2934832 |
T |
|
| Q |
126 |
cttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcac |
198 |
Q |
| |
|
|| |||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
2934831 |
ctcaagtcaagtaaacacttacttttagtattcactttaaacctaactccagcttctaacaattcagttgcac |
2934759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 2997122 - 2997302
Alignment:
| Q |
29 |
gtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaacctt |
128 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||| |||||||||||||||| ||||||||||||| |
|
|
| T |
2997122 |
gtaatgaaactgctccaaagcaaccatattccgaaataaagcttcggtccgatcctcaacaattaacgaaggaatttcaagaacttctcccgaaaacctc |
2997221 |
T |
|
| Q |
129 |
aagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactcggtggatgt |
209 |
Q |
| |
|
|||||||||||||| || |||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
2997222 |
aagtcaagtaaacacttgcttttagtgttcactttaaacttaactccagcttctaacaactcagttgcacttggtagatgt |
2997302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 2658706 - 2658920
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgagg |
100 |
Q |
| |
|
||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||| ||||| |||||||| ||| ||| ||| |||||||||| |
|
|
| T |
2658706 |
cataatcagtaatatatgactcataagggtaatgacattgctccaaagcaaccatatttcgaaacaaaatttcagtcctatcgtcaaccgttaattgagg |
2658805 |
T |
|
| Q |
101 |
aatttcaagaactcctcccga------aaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagtt |
194 |
Q |
| |
|
|||||||||||||||||| || |||||| |||||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2658806 |
aatttcaagaactcctcctgattttgaaaacctcaagtcaagtaaacacttacttttagtgctcactttaaacctaactccagcttctaacaactcagtt |
2658905 |
T |
|
| Q |
195 |
gcactcggtggatgt |
209 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
2658906 |
gcactcggtagatgt |
2658920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 2983223 - 2983024
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtct---gatccgtaacttttaattg |
97 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||| |||| ||||||| |
|
|
| T |
2983223 |
cataatcaagaatatatgactcatgagggtaatgacaatgctccaaagcaatcatattccgaaacaaaatttcggtcgtccgatcatgaactattaattg |
2983124 |
T |
|
| Q |
98 |
aggaatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| |||||| ||||||| ||| ||||||| |||||||||||||||||||| ||||| ||||||| |
|
|
| T |
2983123 |
aggaatttcaagaactcctcccgaaaacctcaagtcatataaacacttacttttagttttcacttgaaacctaactccagcttctaccaactgagttgca |
2983024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 2978550 - 2978408
Alignment:
| Q |
54 |
atattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcag |
153 |
Q |
| |
|
|||| |||||| |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| | ||||| || |
|
|
| T |
2978550 |
atataccgaaacaaaatttcggtcccatcctcaactcttaattgaggaatttcaagaactcctcccgaaaacctcaaatcaagtaaacactcacttttag |
2978451 |
T |
|
| Q |
154 |
tgttcacttcaaacctaactccagcttctaacaactcagttgca |
197 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||| ||||||||| |
|
|
| T |
2978450 |
tgttcactttaaacctaa-tccagcttctaacaattcagttgca |
2978408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 2954633 - 2954557
Alignment:
| Q |
66 |
aaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaaccttaagtcaagtaaaca |
142 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||||| ||||||||| | |||||||| |||||||||||||| |
|
|
| T |
2954633 |
aaaatatcggtctgatcatcaactcttaattgaggaattccaagaactcgttgtgaaaacctcaagtcaagtaaaca |
2954557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2979248 - 2979192
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatat |
57 |
Q |
| |
|
||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
2979248 |
cataatcagtaatatatgactcatgagggtaataacactgctccaaagcaaccatat |
2979192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 3339382 - 3339176
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgagg |
100 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||| |||||||||| |
|
|
| T |
3339382 |
cataatcaataatatatgactcatcagggtaatgacactgctccaaagcaaccatattccgaaacaaaatttcggtcccatcgtcaactgttaattgagg |
3339283 |
T |
|
| Q |
101 |
aatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactc |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||||| |||||||||||| |||||||||||||||||||| || |
|
|
| T |
3339282 |
aatttcaagaactcctcccgaaaacctcaagccaagtaaacactcacttttagtgttcactttaaacctaactcctgcttctaacaactcagttgcgctt |
3339183 |
T |
|
| Q |
201 |
ggtggat |
207 |
Q |
| |
|
||||||| |
|
|
| T |
3339182 |
ggtggat |
3339176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 113; Significance: 2e-57; HSPs: 3)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 34963 - 35171
Alignment:
| Q |
1 |
cataatcagaaatatatgtctccatagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgagg |
100 |
Q |
| |
|
||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||| |||| |
|
|
| T |
34963 |
cataatcagtaatatatgactcataagggtaatgacactgctccaaagcaaccatattccgaaacaaaatttcggtcccatcctcaacttctaatcgagg |
35062 |
T |
|
| Q |
101 |
aatttcaagaactcctcccgaaaaccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactc |
200 |
Q |
| |
|
||||||||| |||||| ||||||||| |||||||||||||| | ||||| || ||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
35063 |
aatttcaagcactccttccgaaaaccccaagtcaagtaaacactcacttttaggcttcacttgaaacctaactccagcttctaacaactgagttgcactc |
35162 |
T |
|
| Q |
201 |
ggtggatgt |
209 |
Q |
| |
|
||| ||||| |
|
|
| T |
35163 |
ggtagatgt |
35171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 44676 - 44793
Alignment:
| Q |
25 |
tagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaa |
124 |
Q |
| |
|
||||||||||| ||| ||||| |||||||||||| | ||| |||||||| | ||||| | || |||||||||||||||||||||||| | | ||||| |
|
|
| T |
44676 |
tagggtaatgatactactccatagcaaccatatttcaaaacaaaatttcaggttgatcatcagctcttaattgaggaatttcaagaactctttctgaaaa |
44775 |
T |
|
| Q |
125 |
ccttaagtcaagtaaaca |
142 |
Q |
| |
|
||| || ||||||||||| |
|
|
| T |
44776 |
cctcaaatcaagtaaaca |
44793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 45123 - 45168
Alignment:
| Q |
152 |
agtgttcacttcaaacctaactccagcttctaacaactcagttgca |
197 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
45123 |
agtggtcacttgaaacctaactccagcttctaacaactcatttgca |
45168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 49613769 - 49613581
Alignment:
| Q |
25 |
tagggtaatgacactgctccaaagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaa |
124 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||| |||||||| ||| |||| |||||| |||||||||||||||||||| | ||| ||||| |
|
|
| T |
49613769 |
tagggtagtgacattgctccaaagcaaccatattccgaaacaaaatttcagtccaatcctcaactttcaattgaggaatttcaagaacccgtcctgaaaa |
49613670 |
T |
|
| Q |
125 |
ccttaagtcaagtaaacatttactttcagtgttcacttcaaacctaactccagcttctaacaactcagttgcactcggtggatgtttca |
213 |
Q |
| |
|
||| || ||||||||||| | ||||| ||||||||||| |||||| || ||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
49613669 |
cctcaaatcaagtaaacactcacttttagtgttcactttaaacctcaccccagcttctaacaactcagttgcactctgtagatgtttca |
49613581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 46 - 193
Target Start/End: Complemental strand, 49618735 - 49618589
Alignment:
| Q |
46 |
aagcaaccatattccgaaataaaatttcggtctgatccgtaacttttaattgaggaatttcaagaactcctcccgaaaaccttaagtcaagtaaacattt |
145 |
Q |
| |
|
||||||||||||||| ||||||| || ||||| | ||| |||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||||| | |
|
|
| T |
49618735 |
aagcaaccatattcc-aaataaagttacggtccggtcctcaactcttaattgaggaatttcaagaactcgtccggaaaacctcaagtcaagtaaacatgt |
49618637 |
T |
|
| Q |
146 |
actttcagtgttcacttcaaacctaactccagcttctaacaactcagt |
193 |
Q |
| |
|
| ||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
49618636 |
agttttagtgttcactttaaacctaactccagcttctaacaactcagt |
49618589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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