View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10112_low_26 (Length: 238)
Name: NF10112_low_26
Description: NF10112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10112_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 32532625 - 32532403
Alignment:
| Q |
1 |
ctatagtaagtaataatctgccaaactgaacctctgctacactctagctccctatactccctctttcagctattcaactagcaataatagttatatttgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32532625 |
ctatagtaagtaataatctgccaaactgaacctctgctacactctagctccctacactccctctttcagctattcaactagcaataatagttacatttgt |
32532526 |
T |
|
| Q |
101 |
ggttgcataaataaggcacaaggagttgtgaaaatgccaagttcagcttcatttttgaggcagttaagtgcaaaggagacttggaaatcaacatcaaata |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32532525 |
ggttgcataaataaggcaaaaggagttgtgaaaatgccaagttcagcttcatttttgaggcagttaagtgcaaaggagacttggaaatcaacatcaaata |
32532426 |
T |
|
| Q |
201 |
ggtggagtggaaaaaacacatac |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
32532425 |
ggtggagtggaaaaaacacatac |
32532403 |
T |
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