View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10112_low_3 (Length: 491)
Name: NF10112_low_3
Description: NF10112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10112_low_3 |
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[»] scaffold1207 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 295; Significance: 1e-165; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 104 - 483
Target Start/End: Original strand, 30775280 - 30775655
Alignment:
Q |
104 |
taatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggc |
203 |
Q |
|
|
|||||||||| || |||||| | || || |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| || |
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|
T |
30775280 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtaattcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagcagttgc |
30775379 |
T |
 |
Q |
204 |
tttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacaccta |
303 |
Q |
|
|
|||||||||||| |||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
30775380 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacaccta |
30775479 |
T |
 |
Q |
304 |
cctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctt |
403 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
30775480 |
cctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctt |
30775579 |
T |
 |
Q |
404 |
ttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgc |
483 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
30775580 |
ttcgctgtgcatcattgaaataagcaggc----acagtgataactgcatttttaactggggattccaaatacatctctgc |
30775655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 434
Target Start/End: Complemental strand, 9336134 - 9335701
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| |||||||||||||||||| ||||| || ||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| ||||| |
|
|
T |
9336134 |
aataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttct |
9336035 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
| |||||||| |||||||||||||| ||||| || ||||| ||||| ||||||||||||||||||||||| || || ||||| |||||||| | || |
|
|
T |
9336034 |
gcttgatgtccactttattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggt |
9335935 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| |||||||| | |||||| ||||||||||||| ||||||||||||||| || ||||| |||||||||||||||||||| | | | ||||||| |
|
|
T |
9335934 |
ggcttttacttcaaatagatcacccttaattgtgaggatagacacatcaaaagtaccgccacccagatcaaagacaaaaatatttcggttaccatcacag |
9335835 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
| |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| | || |||||||| |||||||| | ||||||||| || |||| |
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|
T |
9335834 |
tcatttctcttatcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatctatggtgg |
9335735 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
| |||||||| | ||||||||| ||||| ||||| |
|
|
T |
9335734 |
cctttcgctgagaatcattgaagtaagctggcac |
9335701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 102 - 435
Target Start/End: Original strand, 35132474 - 35132807
Alignment:
Q |
102 |
actaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtg |
201 |
Q |
|
|
||||||||| || || ||||| | |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | |||| |
|
|
T |
35132474 |
actaatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttccggcagtg |
35132573 |
T |
 |
Q |
202 |
gctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacc |
301 |
Q |
|
|
|| ||||||| ||||||| | | ||||| || || | || ||||||||||| |||||||||||||| |||||||||||||| || || |||| |
|
|
T |
35132574 |
gccttaacttggaagacattatccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaagacaaaaatattttgttctccagcacaat |
35132673 |
T |
 |
Q |
302 |
tacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggc |
401 |
Q |
|
|
| |||||| ||||| |||||||||| ||||| ||||| || ||||| |||| |||||||||||| |||||||||| ||||||||||| |||||||| |
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|
T |
35132674 |
cagatctcttgtcaaggccatatgcaaccgctgcggcagtaggttcattcattactctcataacattgggaccagcaatagcaccagcatctatagtggc |
35132773 |
T |
 |
Q |
402 |
ttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|||||| || | |||| | ||||||||||||||| |
|
|
T |
35132774 |
ttttcgttgagaatcactaaaataagcaggcaca |
35132807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 23596521 - 23596395
Alignment:
Q |
308 |
tcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcg |
407 |
Q |
|
|
|||| ||||| ||||| |||||||| || ||||||||||| ||||| |||||||| ||||| || |||| |||| ||||||||||| |||| |||| || |
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|
T |
23596521 |
tcttatcaagaccataagcaatagcggcagcagtgggctcgttaataattctcatcacattgagtccagaaatgacaccagcatccttagtagcttgacg |
23596422 |
T |
 |
Q |
408 |
ctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|||| ||| ||||| || |||||||| |
|
|
T |
23596421 |
ttgtgaatcgttgaagtatgcaggcac |
23596395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 4678800 - 4678367
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
4678800 |
aataaagaatctac-tcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaagggttttgcgttct |
4678702 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |
|
|
T |
4678701 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgagtgtttccagcagt |
4678602 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| |||||||||||| |||| || ||| | |||| ||||||||||||||| ||||||||||| ||||||||||| ||||| | | | ||||| |
|
|
T |
4678601 |
ggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactt |
4678502 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| |||| ||||||||||||||||| |||| || || || |||||| || |||||||| |||||||||||||||||||| || || | |
|
|
T |
4678501 |
tcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagcaatggcaccagcatctatggtag |
4678402 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
||||||| || | ||||||||| || ||||||||| |
|
|
T |
4678401 |
cttttcgttgagaatcattgaagtatgcaggcaca |
4678367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 41 - 474
Target Start/End: Complemental strand, 34466996 - 34466567
Alignment:
Q |
41 |
agagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctac |
140 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||| || | | | | ||| |||||| ||| ||||| |||| | |||||||||| | | |
|
|
T |
34466996 |
agagtgtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaactcctttgc |
34466897 |
T |
 |
Q |
141 |
aaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggaga |
240 |
Q |
|
|
||||| |||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| | | |||||||| |||||| |
|
|
T |
34466896 |
aaagtggttcgccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggaga |
34466797 |
T |
 |
Q |
241 |
gacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcag |
340 |
Q |
|
|
|||||||||||||||||||||||||| |||||||| |||||||| | || | || | | ||||||| ||||||||||||||||||||||| |||| |
|
|
T |
34466796 |
gacacatcaaaagtcccaccaccaaggtcaaagacgaaaatatttccttcttccacaaagtcagctctcttgtcaagtccatatgcaatagctgcagcag |
34466697 |
T |
 |
Q |
341 |
tgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacag |
440 |
Q |
|
|
|||| ||||| |||||| || ||||||||| |||||||| | ||||||||||| ||| ||||||||||| | |||||| |||||||||||| || | |
|
|
T |
34466696 |
tgggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatccacagtagcttttcgctgagaatcattaaaataagcaggc----acgg |
34466601 |
T |
 |
Q |
441 |
tgacaactgcatttttaactggggattccaaata |
474 |
Q |
|
|
||| ||||||||| |||| ||| ||||||||||| |
|
|
T |
34466600 |
tgataactgcattcttaattggtgattccaaata |
34466567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 37 - 434
Target Start/End: Original strand, 15594995 - 15595399
Alignment:
Q |
37 |
aaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcct |
136 |
Q |
|
|
||||||||| ||| |||||||| ||||| ||||||||||| |||| |||| ||| |||| | |||| ||||| || |||||| | ||||| |||| |
|
|
T |
15594995 |
aaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgttcttcgtcttgaattcct |
15595094 |
T |
 |
Q |
137 |
ctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag |
236 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||| ||||| | | |||||||| || |
|
|
T |
15595095 |
gcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtgagtgtttccgcctgtggccttaacttggaagaccttgtccttaattgttag |
15595194 |
T |
 |
Q |
237 |
gagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg-- |
334 |
Q |
|
|
|| ||||||||||||||| ||||||||||||||||||||||||||||| || || || |||| || ||||| ||||| |||||||||||||||| |
|
|
T |
15595195 |
gatagacacatcaaaagtgccaccaccaagatcaaagacaaaaatatttctttctccaacacagttaatcctcttgtcaaggccatatgcaatagctgca |
15595294 |
T |
 |
Q |
335 |
-----ctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagca |
429 |
Q |
|
|
| || || || ||||| |||| | ||||||||||| |||||||||||||| ||||| |||||||||||||| || | |||||||| ||||||| |
|
|
T |
15595295 |
gctgtcagctgtcggttcattgattacccgtataacattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagca |
15595394 |
T |
 |
Q |
430 |
ggcac |
434 |
Q |
|
|
||||| |
|
|
T |
15595395 |
ggcac |
15595399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 34)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 8659288 - 8659721
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
|
|
T |
8659288 |
aataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttgggttac |
8659387 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |
|
|
T |
8659388 |
cactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtgagtgtttccagaagt |
8659487 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| ||||||||||||||||| || ||||| |||| ||||||||||||||| |||||||||||||||||||| |||||||| | | ||||||| |
|
|
T |
8659488 |
ggcttttacttcaaagacatcacccttcattgtaaggatagacacatcaaaagtaccaccaccaagatcaaagaccaaaatattttgtttaccatcacag |
8659587 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
||||||||| |||| ||||||||||||||||| ||||| || ||||||||||| || |||||||| |||||||||||||| | ||| || |||| |
|
|
T |
8659588 |
tcacctctcttgtcaaaaccatatgcaatagctgcagcagtaggttcattaattatctgaatgacattaaggccagcaatggcaccggaatctatggtgg |
8659687 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|||||||||| | ||||||||| || |||||||| |
|
|
T |
8659688 |
cttttcgctgagaatcattgaactatgcaggcac |
8659721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 8667344 - 8667778
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| |||||||||||||||||| ||||| || ||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| ||||| |
|
|
T |
8667344 |
aataaagcatctacctcaacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttct |
8667443 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
||| |||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||| | ||| |
|
|
T |
8667444 |
gactgatgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaaggtgagtgtttcctgcagt |
8667543 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| | | ||||||| |
|
|
T |
8667544 |
ggctttcacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtcccgccacccagatcaaagacaaaaatatttcggctaccatcacag |
8667643 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
| |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| | || |||||||| |||||||| | ||||||||| || |||| |
|
|
T |
8667644 |
tcatttctcttgtcaaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatctatggtgg |
8667743 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
| |||||||| | ||||||||| ||||| |||||| |
|
|
T |
8667744 |
cctttcgctgagaatcattgaagtaagctggcaca |
8667778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 96 - 483
Target Start/End: Complemental strand, 8585854 - 8585471
Alignment:
Q |
96 |
gttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttcca |
195 |
Q |
|
|
||||||| |||| |||||||| ||||| | || || ||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||| |||||| |
|
|
T |
8585854 |
gttcttagtaatatccacattgttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttcca |
8585755 |
T |
 |
Q |
196 |
gaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcat |
295 |
Q |
|
|
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||| |
|
|
T |
8585754 |
gcggttgctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccat |
8585655 |
T |
 |
Q |
296 |
cacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccat |
395 |
Q |
|
|
|||| ||||| | || ||||| ||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
T |
8585654 |
cacagttacctttgttgtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatccat |
8585555 |
T |
 |
Q |
396 |
agtggcttttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgc |
483 |
Q |
|
|
|||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||| ||| || |||| |||||| ||||||| |
|
|
T |
8585554 |
ggtggcttttcgctgagaatcattgaaataagcaggc----acagtcacaactgcattttgaacaggtgatttcaaatatgtctctgc |
8585471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 153 - 474
Target Start/End: Original strand, 8628609 - 8628926
Alignment:
Q |
153 |
cattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
252 |
Q |
|
|
|||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
8628609 |
cattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
8628708 |
T |
 |
Q |
253 |
gtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaa |
352 |
Q |
|
|
|||||||||||||||||||| ||||||||||| | ||| |||||||||||||| | || ||||| ||||||||||||||||| |||||||| ||||| | |
|
|
T |
8628709 |
gtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacacctacctttgttgtcaaggccatatgcaatagctgcagcagtggggtcattga |
8628808 |
T |
 |
Q |
353 |
ttattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcat |
452 |
Q |
|
|
|||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||||||||| ||||||||||||| |
|
|
T |
8628809 |
ttatcctcataacattaaggccagcaatggcaccagcattcatggtggcttttcgctgagaatcattgaaataagcaggcacg----gtgacaactgcat |
8628904 |
T |
 |
Q |
453 |
ttttaactggggattccaaata |
474 |
Q |
|
|
|||| || || |||| |||||| |
|
|
T |
8628905 |
tttttacaggtgatttcaaata |
8628926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 8654375 - 8654809
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| |||||||||||||||||||||||| | ||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
|
|
T |
8654375 |
aataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttac |
8654474 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||| ||| |
|
|
T |
8654475 |
cgctaatttccactttattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctccccctaggtgcgtgtttccagcagt |
8654574 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| || |||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||| || |||||||||| | | ||||| | |
|
|
T |
8654575 |
ggcttttacgtcaaagacatcacccttaattgtgagtatagacacatcaaaagtaccaccaccaagatcaaataccaaaatattccgtttaccatcatag |
8654674 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
||| || ||| ||||| ||||||||||||||||| ||||| || ||||| | ||| | || || ||||| |||||||||||||||||||| || || | |
|
|
T |
8654675 |
ttacttcgcttgtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatctatggttg |
8654774 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|||||||||| | |||||||| || || |||||| |
|
|
T |
8654775 |
cttttcgctgagagtcattgaagtatgccggcaca |
8654809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 10494617 - 10494183
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| ||| |||||||| ||||||||||| | ||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
|
|
T |
10494617 |
aataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcc |
10494518 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||| ||||||||||| || | ||| |
|
|
T |
10494517 |
cactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcagt |
10494418 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| | | | | ||||| |
|
|
T |
10494417 |
ggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccagatcaaagacaaaaatatttcggttaccctcacaa |
10494318 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| | || |||||||| |||||||| ||||||||||| ||||| | |
|
|
T |
10494317 |
tcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatcaatagtag |
10494218 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
| ||||| || | ||| ||||| ||||| |||||| |
|
|
T |
10494217 |
cctttcgttgagaatcgttgaagtaagccggcaca |
10494183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 13333699 - 13333265
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| |||||| ||||||||||||||||| | || |||||| |||| ||| ||||||| ||||||||||||||||||| ||||| ||||| |||| |
|
|
T |
13333699 |
aataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaaggattttgggttcc |
13333600 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
||| || || || ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| | || |
|
|
T |
13333599 |
cactgatatcgacgttattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctcccccaaggtgagtgtttcctgcggt |
13333500 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| ||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||| | || | ||||||| |
|
|
T |
13333499 |
ggcttttacttcaaagacatcacccataattgtaaggatagacacatcaaaagtaccaccacccagatcaaagacaaaaatatttcgcttaccatcacaa |
13333400 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||||| || | |||||| |||||||| ||||||||||| || |||| |
|
|
T |
13333399 |
tcacgtctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatctatggtgg |
13333300 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
| |||||||| | ||||||||| ||||| |||||| |
|
|
T |
13333299 |
cctttcgctgagaatcattgaagtaagccggcaca |
13333265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 1301385 - 1301823
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||||||| |||||||| |||||||| || || |||||||||||||| ||||||||||| || ||| |||||||||||| ||||| ||| ||| |
|
|
T |
1301385 |
aataaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttac |
1301484 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
|||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| || |||||||| |||||| ||| |
|
|
T |
1301485 |
cactaatgtccactttattcttctttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttccaccagt |
1301584 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| |||||||||||||| || || || || |||| ||||||||||||||| ||||| ||||| |||||||| |||||||||| | | ||||||| |
|
|
T |
1301585 |
ggcttttacttcaaagacatcgcccttgatggtaaggatagacacatcaaaagtaccaccgccaaggtcaaagaccaaaatattccgtttaccatcacag |
1301684 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcag----tgggctcattaattattctcataacattaagaccagcaatggcaccagcatccata |
396 |
Q |
|
|
|| |||||| |||| ||||| ||||||||||| |||| | || ||||||||||| || |||||||| |||||||| ||||| ||||| || |
|
|
T |
1301685 |
tcacttctcttgtcaaaaccatacgcaatagctgcagcagtagctaggttcattaattatctgaatgacattaaggccagcaattgcaccggcatctatg |
1301784 |
T |
 |
Q |
397 |
gtggcttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|||||||||||||| | ||||||||||| ||||||||| |
|
|
T |
1301785 |
gtggcttttcgctgagaatcattgaaatgtgcaggcaca |
1301823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 431
Target Start/End: Original strand, 17260166 - 17260596
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| |||||||||||| |||| ||| |||| ||||| |||||||| ||||| | || || |||||||||||||||| ||||| ||||| |||| |
|
|
T |
17260166 |
aataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggttcc |
17260265 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
| ||||||||| || ||| | |||||| |||||||||||| |||| ||||||||| |||||||||||||| ||||| || ||||||| |||| || |
|
|
T |
17260266 |
caataatgtccaattttttcgttcttttgatctcctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctccaccggt |
17260365 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
||| |||||||| ||||| | | | |||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||||| | | |||| |
|
|
T |
17260366 |
ggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtccccccaccaaggtcaaagacaaaaatattccgtacttaaacacaa |
17260465 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| |||| ||||||||||||||||| ||| | || |||||||||| ||| ||||| ||| |||||||| |||||||||| || |||| |
|
|
T |
17260466 |
ttagttctcttgacaaggccatatgcaatagctgcagcaataggttcattaattaacttcaaaacataaaggccagcaataacaccagcatctatggtgg |
17260565 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcagg |
431 |
Q |
|
|
|||||||||| | |||||||||||||||||| |
|
|
T |
17260566 |
cttttcgctgagaatcattgaaataagcagg |
17260596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 139 - 435
Target Start/End: Original strand, 8602037 - 8602333
Alignment:
Q |
139 |
acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
238 |
Q |
|
|
||||||| ||||||||||| |||||||||||||||||| || ||||| |||| ||| |||||||| || |||||||||| || | ||||||||||| | |
|
|
T |
8602037 |
acaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgagaa |
8602136 |
T |
 |
Q |
239 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc |
338 |
Q |
|
|
|||| ||||||||||| ||||||||||||||||| | |||||||| ||||| || |||| || ||||||| | ||| |||||||||| ||| ||||| |
|
|
T |
8602137 |
gagaaacatcaaaagttccaccaccaagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgc |
8602236 |
T |
 |
Q |
339 |
agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
||| |||||||| ||||| | ||| ||||| ||||||||||||||||||||||| | |||||||||||||| | |||||| |||||||| |||||| |
|
|
T |
8602237 |
agttggctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggcaca |
8602333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 103 - 435
Target Start/End: Complemental strand, 8636484 - 8636152
Alignment:
Q |
103 |
ctaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtgg |
202 |
Q |
|
|
|||||||| || || |||||| | |||| ||||||||||| || | ||||||||||||||||||||||||||| || ||||| |||| ||| | ||||| |
|
|
T |
8636484 |
ctaatgtctaccttgttcttcctcttgatttcctctacaaaatattccaccattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtgg |
8636385 |
T |
 |
Q |
203 |
ctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacct |
302 |
Q |
|
|
|||||||||||||||| |||||||||||| |||| | |||||| || || || ||||||||||||||||| || ||||| || ||||| | |||| | |
|
|
T |
8636384 |
ctttaacttcaaagacttcacctttaattttgagtatagacacgtcgaatgtaccaccaccaagatcaaatacgaaaatgtttctctctttaacacagtt |
8636285 |
T |
 |
Q |
303 |
acctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggct |
402 |
Q |
|
|
||||||||| | ||||||||| |||| |||||| ||||| || ||||| ||||| | || |||||||| || ||||||||||||||||| | |||| | |
|
|
T |
8636284 |
acctctcttttgaagtccatacgcaaaagctgcagcagttggttcattgattatccgaattacattaaggccggcaatggcaccagcatctttggtggat |
8636185 |
T |
 |
Q |
403 |
tttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|| ||||| | ||||||||||||||| |||||| |
|
|
T |
8636184 |
ttacgctgagaatcattgaaataagcgggcaca |
8636152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 428
Target Start/End: Original strand, 17267864 - 17268291
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| |||||||||||| |||| ||| |||||||||| |||||||| ||||| | || || |||||||||||||||| | || ||||| |||| |
|
|
T |
17267864 |
aataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggttcc |
17267963 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
| ||| | || || || ||| |||||| ||||| ||||| |||| |||||||| |||||||||||||| ||||| || ||||||| |||| || |
|
|
T |
17267964 |
caacaattttcaatttttttttccttttgatttcctcaacaaaatagtataccattctattatcaaagtcctcacccccaagatgagtgtctccaccggt |
17268063 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
||| |||||||| ||||| | | | |||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| || || |||| |
|
|
T |
17268064 |
ggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtcccaccaccaaggtcaaagacaaaaatattccgttcttcaacacag |
17268163 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| |||| ||||||||||||||||| ||||| || ||||| |||| ||| |||||||| ||||||||| |||||||||| || |||| |
|
|
T |
17268164 |
ttagttctcttgccaaggccatatgcaatagctgcagcagttggttcattgattaccttcaatacattaaggccagcaatgacaccagcatctatggtgg |
17268263 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagc |
428 |
Q |
|
|
|||||||||| | ||| ||||| ||||| |
|
|
T |
17268264 |
cttttcgctgagaatcgttgaagtaagc |
17268291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 37 - 434
Target Start/End: Complemental strand, 27831082 - 27830685
Alignment:
Q |
37 |
aaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcct |
136 |
Q |
|
|
|||||||||||||| |||||| |||| || ||||||| ||||| |||| | ||| |||| |||||||||||| | |||||||| |||||| ||| |
|
|
T |
27831082 |
aaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttcttcttcttgaacacct |
27830983 |
T |
 |
Q |
137 |
ctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag |
236 |
Q |
|
|
| ||||| ||||||||||| || ||||||||||||||||| || |||||||||||||||| ||| || ||||||| ||||| | | | |||||||| | |
|
|
T |
27830982 |
ccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtgagtgtttccagcagttgccttaacttggaagaccttatccttaattgtaac |
27830883 |
T |
 |
Q |
237 |
gagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgct |
336 |
Q |
|
|
||||||||||||||||||||||||||||| ||||| ||||||||||||| || || | | | || | | ||||| ||||||||||||||||| |
|
|
T |
27830882 |
aagagacacatcaaaagtcccaccaccaaggtcaaacacaaaaatattccgttctccagtatattttgttcccgtgtcaaggccatatgcaatagctgca |
27830783 |
T |
 |
Q |
337 |
gcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
||||| ||||| | ||||| | |||||||||||| |||||||||||||| | ||| | |||||||||||| || | |||||||||||||| ||||| |
|
|
T |
27830782 |
gcagtaggctcgcttattatccgcataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagagtcattgaaataagctggcac |
27830685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 43 - 434
Target Start/End: Complemental strand, 8383077 - 8382686
Alignment:
Q |
43 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggt-tttgcgttcttactaatgtccacattattcttctttttgaactcctctaca |
141 |
Q |
|
|
|||||||| |||||||||||||| || ||||| ||||| | |||| | |||| |||| |||||||||| ||||| |||| | |||||||| || ||| |
|
|
T |
8383077 |
agtgtcctttttgccctctcgcaagccgttcttaaccttc-taagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaaca |
8382979 |
T |
 |
Q |
142 |
aagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagag |
241 |
Q |
|
|
||||| ||||| ||||||||||| ||||| || || || || ||||||| ||| | |||||| || || ||||||||| | |||||||||||||||| |
|
|
T |
8382978 |
aagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgaggagag |
8382879 |
T |
 |
Q |
242 |
acacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagt |
341 |
Q |
|
|
||||||||||||| ||||||||||||||||||| |||||||| ||||| || ||| || ||||||||| ||| |||||||||| ||| || ||||| |
|
|
T |
8382878 |
acacatcaaaagttccaccaccaagatcaaagatgaaaatatttctctcttcaagacaattagctctcttctgaaggccatatgcaagagcagcggcagt |
8382779 |
T |
 |
Q |
342 |
gggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|||||||| ||||| | ||| ||||| || |||||||| ||||||||||| | |||||||| || || | |||||||||||| |||||||| |
|
|
T |
8382778 |
tggctcattgattatccgcattacattgaggccagcaatcgcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcac |
8382686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 6789437 - 6789871
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
|||||||| |||||||||| ||| ||||| | | ||||||||| ||| || ||||| || || |||||||||||||| | ||||| ||| ||| |
|
|
T |
6789437 |
aataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaaccttcttaaggcccttgagtttc |
6789536 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
| |||| ||||| || |||||| | || ||||||||| |||||||||| |||| || |||||||||||||||||| |||||||||||||||||| || |
|
|
T |
6789537 |
cagtaatatccactttgttcttcctcttaaactcctctgcaaagtagtttaccaatcggttatcaaagtcctctcctccgaggtgagtgtttccaccggt |
6789636 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
||| ||||||| ||||| | | |||| ||||| | || ||||||||| ||||| ||||||||||| || ||||| |||||||| | || || | | |
|
|
T |
6789637 |
ggccttaacttggaagaccttatctttgattgttaagatagacacatcgaaagtgccaccaccaaggtcgaagacgaaaatatttttttctccaccgtaa |
6789736 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| ||||| |||||||||| ||| || || || || ||||| ||||||| |||||||||||||||||||||||||||||||| | ||||| |
|
|
T |
6789737 |
ttagttctcttatcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtgg |
6789836 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|||| || || | |||||||||||||||||||||| |
|
|
T |
6789837 |
ctttccgttgagaatcattgaaataagcaggcaca |
6789871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 74 - 431
Target Start/End: Original strand, 3147262 - 3147627
Alignment:
Q |
74 |
tcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctc |
173 |
Q |
|
|
||||||||| ||||| | ||| ||||| ||||||||| || || |||||||| || |||||| | |||||||||||||||| || |||||||||||||| |
|
|
T |
3147262 |
tcaacctccttaaggctcttgagttctcactaatgtctaccttgttcttcttcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctc |
3147361 |
T |
 |
Q |
174 |
tcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaag |
273 |
Q |
|
|
|||||| ||||| |||||||| | |||| ||||||| |||||| | | | |||||||| || |||||||||||||||||||||||||| | |||||| |
|
|
T |
3147362 |
tcccccaaggtgggtgtttcctgcgatggccttaacttgaaagaccttatccttaattgtaagaagagacacatcaaaagtcccaccacccaagtcaaag |
3147461 |
T |
 |
Q |
274 |
acaaaaatat-----tcctct-cagcat--cacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataac |
365 |
Q |
|
|
| |||||||| |||||| || || |||| || |||||| || |||||||| ||||||||||| ||||| || ||||| ||||| | ||||| |
|
|
T |
3147462 |
ataaaaatattacgctcctctacacaattacacaattagttctcttgtccagtccatacgcaatagctgcagcagtaggttcattgattatccgcataat |
3147561 |
T |
 |
Q |
366 |
attaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
431 |
Q |
|
|
|||||| |||||||| |||||||||| || || ||||| ||||| |||||||||||||||||||| |
|
|
T |
3147562 |
attaaggccagcaataacaccagcatctattgtcgctttccgctgagcatcattgaaataagcagg |
3147627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 37 - 435
Target Start/End: Original strand, 8646838 - 8647236
Alignment:
Q |
37 |
aaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcct |
136 |
Q |
|
|
||||| |||||||| ||||| |||||||| || ||||||||||||| ||||| | ||| ||| | |||||||||| || |||||||| || || || | |
|
|
T |
8646838 |
aaagatagtgtcctttttgctctctcgcatgccgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattctt |
8646937 |
T |
 |
Q |
137 |
ctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag |
236 |
Q |
|
|
| |||||| || ||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||| | | | |||||||| || |
|
|
T |
8646938 |
gtgcaaagtggtccaccattctactatcaaagtcctctcctccgaggtgagtgtttccagcggtggctttaacatgaaagaccttatccttaattgtaag |
8647037 |
T |
 |
Q |
237 |
gagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgct |
336 |
Q |
|
|
|||||||||||||||||| ||||||||||| || |||| || ||||| | || || |||| | |||||| ||||| |||||||| | ||| || |
|
|
T |
8647038 |
gagagacacatcaaaagttccaccaccaaggtcgaagatgaatatatttcgttcttcagcacaatttgttctcttgtcaaggccatatgcgagagcagca |
8647137 |
T |
 |
Q |
337 |
gcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|| || || ||||| ||||| | || | |||||| ||||||||||| || ||||| ||||||||||||||||| ||||||||| || ||||||||| |
|
|
T |
8647138 |
gctgttggttcattgattatccggatgatattaaggccagcaatggccccggcatctatagtggcttttcgctgataatcattgaagtatgcaggcaca |
8647236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 43 - 431
Target Start/End: Original strand, 8545600 - 8545987
Alignment:
Q |
43 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
142 |
Q |
|
|
|||||||| |||||| |||| ||||||||||||||||||| |||| || || |||| |||||| ||| |||| |||||| | |||||||||| |||| |
|
|
T |
8545600 |
agtgtcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaa |
8545699 |
T |
 |
Q |
143 |
agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga |
242 |
Q |
|
|
|||| ||||||||||||||||||||||| || || || |||| ||||| ||||| |||||| || || |||||||| | | ||||||||| || | ||| |
|
|
T |
8545700 |
agtaattcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtggccttgacatcaaagaccttatttttaattgtaagaataga |
8545799 |
T |
 |
Q |
243 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
342 |
Q |
|
|
|||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || | || || ||||||| | ||| |||||||||| ||| || ||||| |
|
|
T |
8545800 |
cacatcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaac-caattagctctcttttgaaggccatatgcaagagccgccgcagtc |
8545898 |
T |
 |
Q |
343 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
431 |
Q |
|
|
|| ||||| ||||| | ||| ||||| ||||| ||||| |||| ||||| | |||| | || | |||| |||||| ||||||||||| |
|
|
T |
8545899 |
ggttcattgattatccgcatgacatttagaccggcaatttcacctgcatcttttgtggatctttgttgtgaatcattaaaataagcagg |
8545987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 43 - 431
Target Start/End: Original strand, 8570278 - 8570666
Alignment:
Q |
43 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
142 |
Q |
|
|
|||||||| ||||||||||| || || ||||| ||||||| |||| ||||| |||| ||||||| ||| | || |||||||| ||||||| || |||| |
|
|
T |
8570278 |
agtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttcacaa |
8570377 |
T |
 |
Q |
143 |
agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga |
242 |
Q |
|
|
||| ||| ||||||||||||||| || || || || |||||||||| ||||| |||||| || |||||| || | | | |||| |||||| | ||| |
|
|
T |
8570378 |
agtgagtcaacattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttcatagttgttatccttaactgtgagaataga |
8570477 |
T |
 |
Q |
243 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
342 |
Q |
|
|
|||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || || | || ||||||| | ||| |||||||||| |||||| ||||| |
|
|
T |
8570478 |
cacatcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaacaaaattagctctcttttgaaggccatatgcaagagctgccgcagtc |
8570577 |
T |
 |
Q |
343 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
431 |
Q |
|
|
|| ||||| ||||| | ||| ||||| ||||||||||| |||| ||||| |||||||| |||| |||| |||||| ||||||||||| |
|
|
T |
8570578 |
ggttcattgattatccgcattacattgagaccagcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg |
8570666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 138 - 431
Target Start/End: Original strand, 8559395 - 8559688
Alignment:
Q |
138 |
tacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagg |
237 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||| || |||||||||| || | ||||||||||| |
|
|
T |
8559395 |
tacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgaga |
8559494 |
T |
 |
Q |
238 |
agagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctg |
337 |
Q |
|
|
||||| ||||||||||| |||||||| |||||||||| |||||||| ||||| | |||| || |||||| | |||||||||||||| ||| |||| |
|
|
T |
8559495 |
agagaaacatcaaaagttccaccaccgagatcaaagatgaaaatatttctctctttaacacaattagatctcttttgaagtccatatgcaagagcagctg |
8559594 |
T |
 |
Q |
338 |
cagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
431 |
Q |
|
|
|||| || ||||| ||||| ||| ||||||||||||||||| |||| ||||| | |||||| ||| || | |||||| ||||||||||| |
|
|
T |
8559595 |
cagttggttcattgattatctgcattacattaagaccagcaatttcacctgcatctttggtggctcttctttgagaatcattaaaataagcagg |
8559688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 43 - 435
Target Start/End: Original strand, 8576293 - 8576685
Alignment:
Q |
43 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
142 |
Q |
|
|
|||||||| |||||| | || || |||||||||||||||| ||||| ||||| |||| |||||| ||| | || | ||| || ||||||||| |||| |
|
|
T |
8576293 |
agtgtcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaa |
8576392 |
T |
 |
Q |
143 |
agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga |
242 |
Q |
|
|
||| | ||||||| ||||||||||||| | || || |||||||||| ||| | |||||| || ||||| ||||||| |||| |||||| | ||| |
|
|
T |
8576393 |
agtgatccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggccttgacttcgaagacattgttcttaactgtgagaataga |
8576492 |
T |
 |
Q |
243 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
342 |
Q |
|
|
|||||||||||| ||||| ||||| ||||||| ||||||||| || | | || |||| || ||||||| | ||| ||||| |||| |||||| ||||| |
|
|
T |
8576493 |
cacatcaaaagttccaccgccaaggtcaaagataaaaatatttcttttatcaacacaattagctctcttttgaaggccatacgcaagagctgccgcagtc |
8576592 |
T |
 |
Q |
343 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|| ||||| ||||| ||| ||||| ||||||||||| ||||| ||||| |||||||| |||| || | |||||| ||||||||||||||| |
|
|
T |
8576593 |
ggttcattgattatctgcatgacattgagaccagcaattgcacctgcatctttagtggctcttcgttgggaatcattaaaataagcaggcaca |
8576685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 139 - 431
Target Start/End: Original strand, 8581763 - 8582055
Alignment:
Q |
139 |
acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
238 |
Q |
|
|
||||||| |||||||||||||||||||| || || || || |||||||||| ||||| |||||| || |||||| || | | | |||| |||||| | |
|
|
T |
8581763 |
acaaagtgattcaccattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagtggccttgacttcatagtcgttattcttaactgtgagaa |
8581862 |
T |
 |
Q |
239 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc |
338 |
Q |
|
|
||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || |||| || ||||||| | ||| |||||||||| |||||| || |
|
|
T |
8581863 |
tagacacatcaaaagttccacctccaaggtcaaagataaaaatatttctcttatcaacacaattagctctcttttgaaggccatatgcaagagctgccgc |
8581962 |
T |
 |
Q |
339 |
agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
431 |
Q |
|
|
||| || ||||| ||||| | ||| ||||| ||||| ||||| |||| ||||| |||||||| |||| |||| |||||| ||||||||||| |
|
|
T |
8581963 |
agtcggttcattgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg |
8582055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 43 - 274
Target Start/End: Complemental strand, 29582042 - 29581811
Alignment:
Q |
43 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
142 |
Q |
|
|
|||||||||||||||||||| || || ||||||| | ||| ||| | ||||| |||| ||||||||||| ||| |||||| | || ||||| | ||| |
|
|
T |
29582042 |
agtgtcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaa |
29581943 |
T |
 |
Q |
143 |
agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga |
242 |
Q |
|
|
|||| |||||||||| |||||||||||||||||| || |||||||| | |||| |||||| || |||||||| |||| | || | |||||| ||||| |
|
|
T |
29581942 |
agtaattcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaaacttatcatccttgagtgtgagaagaga |
29581843 |
T |
 |
Q |
243 |
cacatcaaaagtcccaccaccaagatcaaaga |
274 |
Q |
|
|
|||||||||||| ||||||||||||||||||| |
|
|
T |
29581842 |
cacatcaaaagtgccaccaccaagatcaaaga |
29581811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 434
Target Start/End: Complemental strand, 29577873 - 29577479
Alignment:
Q |
43 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
142 |
Q |
|
|
|||| ||||||||||||||| || |||||||||| | ||| ||| | ||||| |||| ||||||||||||||| |||||| | || ||||| | |||| |
|
|
T |
29577873 |
agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa |
29577774 |
T |
 |
Q |
143 |
agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga |
242 |
Q |
|
|
||| | |||||||| | ||||| ||||||||||| || |||||||| | |||| |||||| || |||||||| |||| | |||| |||||| ||||| |
|
|
T |
29577773 |
agtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatcatccttaagtgtgagaagaga |
29577674 |
T |
 |
Q |
243 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctct---cagcatcacacctacctctcttctcaagtccatatgcaatagctgctgca |
339 |
Q |
|
|
||||||||| || ||||||||||||||||||| || | ||| | || || || || | |||||||||| | || ||||||||||| || || ||| |
|
|
T |
29577673 |
cacatcaaaggtgccaccaccaagatcaaagatgaatacatttcgctttccaacaacaaaattacctctcttttgaattccatatgcaagtgcagcagca |
29577574 |
T |
 |
Q |
340 |
gtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|| || ||||| ||||| | ||| ||||| || |||||||| || ||||| | |||||||||||||| | ||||||||||||||| ||||| |
|
|
T |
29577573 |
gttggttcattgattatccgcattacattgaggccagcaataatgccggcatctttggtggcttttcgctgagaatcattgaaataagctggcac |
29577479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 435
Target Start/End: Original strand, 8609961 - 8610276
Alignment:
Q |
120 |
cttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagaca |
219 |
Q |
|
|
|||| |||||||||||| ||||||| || |||||||||| ||||||||||||||| || |||||||| | ||||| ||| || || || || || || |
|
|
T |
8609961 |
cttccttttgaactccttcacaaagtgattaaccattctgtgatcaaagtcctctcctccaaggtgagtatctccagcagtagccttgacatcgaaagca |
8610060 |
T |
 |
Q |
220 |
tcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtc |
319 |
Q |
|
|
| |||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||||||| || | | |||| || ||||||||| ||| | |
|
|
T |
8610061 |
ttgtttttaattgtgagaacagacacatcgaaagtcccaccaccaagatcaaagataaaaatatttctattttccacacaattagctctcttctgaagac |
8610160 |
T |
 |
Q |
320 |
catatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcatt |
419 |
Q |
|
|
||||||||| ||| || || || || ||||| || || | || |||||||| |||| |||| |||||||||| | |||||||| ||||| | |||||| |
|
|
T |
8610161 |
catatgcaagagccgcagccgttggttcattgataatccggattacattaaggccagaaatgacaccagcatcttttgtggctttccgctgagaatcatt |
8610260 |
T |
 |
Q |
420 |
gaaataagcaggcaca |
435 |
Q |
|
|
||||||||||||||| |
|
|
T |
8610261 |
aaaataagcaggcaca |
8610276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 8590713 - 8590836
Alignment:
Q |
151 |
accattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaa |
250 |
Q |
|
|
|||||||||||||||||||||||||| || ||||| || | ||| ||||||||||| || |||||| ||||||||| | |||||| ||||||||||||| |
|
|
T |
8590713 |
accattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaagagacacatcaa |
8590812 |
T |
 |
Q |
251 |
aagtcccaccaccaagatcaaaga |
274 |
Q |
|
|
|||| ||||||||||||||||||| |
|
|
T |
8590813 |
aagtgccaccaccaagatcaaaga |
8590836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 431
Target Start/End: Original strand, 8538120 - 8538391
Alignment:
Q |
160 |
ttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccac |
259 |
Q |
|
|
||||||||||||||||| || |||||||| | ||| | |||||| || ||| |||| ||| | || | ||| |||||||| ||||||||||| |||| |
|
|
T |
8538120 |
ttatcaaagtcctctcctccaaggtgagtatctccggcagtggccttgactgtaaaggcattattcttcaatgtaaggagagatacatcaaaagttccac |
8538219 |
T |
 |
Q |
260 |
caccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattct |
359 |
Q |
|
|
||||||||||||||| |||| || ||||| || |||| || ||||||| | ||| || ||||||| ||| || || || || ||||| ||||| | |
|
|
T |
8538220 |
caccaagatcaaagatgaaaacttttctctcttcaacacaattagctctcttttgaaggccgtatgcaagagcagcagctgtaggttcattgattatccg |
8538319 |
T |
 |
Q |
360 |
cataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
431 |
Q |
|
|
||| ||||| || ||||||||| |||||||||| | |||||| ||||||||| |||||||||||||||||| |
|
|
T |
8538320 |
cattacattgaggccagcaatgacaccagcatctttggtggctcttcgctgtgaatcattgaaataagcagg |
8538391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 105 - 271
Target Start/End: Complemental strand, 7877872 - 7877706
Alignment:
Q |
105 |
aatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggct |
204 |
Q |
|
|
||||||||| ||||||||| | || |||||| || || | ||||| |||||||||||||||||||||||| || |||||||| | ||| | ||| ||| |
|
|
T |
7877872 |
aatgtccactttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagct |
7877773 |
T |
 |
Q |
205 |
ttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaa |
271 |
Q |
|
|
| || |||||| |||| |||| | |||||| ||||||||||| ||||| |||||||||||||||| |
|
|
T |
7877772 |
attacatcaaagctatcatcttttagtgtgagaagagacacatcgaaagtgccaccaccaagatcaa |
7877706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 8671568 - 8671440
Alignment:
Q |
306 |
tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt |
405 |
Q |
|
|
|||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| | || |||||||| |||||||| | ||||||||| || ||||| || |
|
|
T |
8671568 |
tctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatcaatggtggccgtt |
8671469 |
T |
 |
Q |
406 |
cgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
||||| | ||||||||| ||||| ||||| |
|
|
T |
8671468 |
cgctgagaatcattgaagtaagctggcac |
8671440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 393
Target Start/End: Original strand, 39985709 - 39985963
Alignment:
Q |
139 |
acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
238 |
Q |
|
|
||||||| ||||||||||||||| ||||| ||||| || || || || |||| ||| | |||||||| || ||||||| | | ||| ||| || || | |
|
|
T |
39985709 |
acaaagtggttcaccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagca |
39985808 |
T |
 |
Q |
239 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc |
338 |
Q |
|
|
||| ||||||||||| ||||||||||| ||||||| || | |||| |||| || ||| | || |||| ||||| ||||| ||||| || || || |
|
|
T |
39985809 |
aagagacatcaaaagtaccaccaccaaggtcaaagatcaagacattcttctctccaacactggttgctttcttgtcaagaccataagcaatggcagcagc |
39985908 |
T |
 |
Q |
339 |
agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatcc |
393 |
Q |
|
|
|||||||||||| || |||| ||| ||||||||||| ||||| | ||||||||| |
|
|
T |
39985909 |
agtgggctcattgataattcgcatgacattaagaccggcaataactccagcatcc |
39985963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 7877671 - 7877542
Alignment:
Q |
306 |
tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt |
405 |
Q |
|
|
|||||| | ||| |||||||||| || || ||||| || ||||||||||| | ||||||||| || || |||| ||||||||||| | ||||||||| |
|
|
T |
7877671 |
tctcttttgaaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagcatcttttgtggctttt |
7877572 |
T |
 |
Q |
406 |
cgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|| || | ||||||||||||||| |||||| |
|
|
T |
7877571 |
cgttgagaatcattgaaataagccggcaca |
7877542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 8102916 - 8103022
Alignment:
Q |
325 |
gcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaat |
424 |
Q |
|
|
|||||||| || ||||| ||||||||||| ||||||| |||||| | |||||| || |||||||||| |||| |||| ||||| | ||||||||| | |
|
|
T |
8102916 |
gcaatagcagcagcagttggctcattaataattctcaaaacatttaaaccagcgataacaccagcatctttagttgcttgacgctgagaatcattgaagt |
8103015 |
T |
 |
Q |
425 |
aagcagg |
431 |
Q |
|
|
||||||| |
|
|
T |
8103016 |
aagcagg |
8103022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 428
Target Start/End: Complemental strand, 8017344 - 8017229
Alignment:
Q |
313 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtg |
412 |
Q |
|
|
|||||||| || ||||||||||| || || ||||| || || ||||||| |||||| || || |||||| |||| |||||| | ||||||| ||||| | |
|
|
T |
8017344 |
tcaagtccgtacgcaatagctgcagctgttggctcgttgataattctcaaaacattgagtcctgcaatgacaccggcatcctttgtggcttgacgctgcg |
8017245 |
T |
 |
Q |
413 |
catcattgaaataagc |
428 |
Q |
|
|
||||||||| ||||| |
|
|
T |
8017244 |
aatcattgaagtaagc |
8017229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 29581688 - 29581651
Alignment:
Q |
397 |
gtggcttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|||||||||||||| | ||||||||||||||||||||| |
|
|
T |
29581688 |
gtggcttttcgctgagaatcattgaaataagcaggcac |
29581651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 223; Significance: 1e-122; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 139 - 474
Target Start/End: Complemental strand, 16662097 - 16661766
Alignment:
Q |
139 |
acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
238 |
Q |
|
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16662097 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
16661998 |
T |
 |
Q |
239 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc |
338 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||| ||| || ||||| |||||||||||||||||||| |
|
|
T |
16661997 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctgctgc |
16661898 |
T |
 |
Q |
339 |
agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatac |
438 |
Q |
|
|
|||||| ||||| ||||| |||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| | ||| || ||||||||||| || |
|
|
T |
16661897 |
agtgggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcagg----aac |
16661802 |
T |
 |
Q |
439 |
agtgacaactgcatttttaactggggattccaaata |
474 |
Q |
|
|
||||||||||||||||||||| || ||||||||||| |
|
|
T |
16661801 |
agtgacaactgcatttttaaccggtgattccaaata |
16661766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 16657760 - 16657326
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||||||| |||| | ||| |||| |
|
|
T |
16657760 |
aataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttgagttcc |
16657661 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
||| |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | ||| |
|
|
T |
16657660 |
cacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagt |
16657561 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|||||| || ||||| |||||||| |||||||| |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||| | | ||||||| |
|
|
T |
16657560 |
ggcttttacctcaaaaacatcacccttaattgtaaggatagacacatcaaaagtaccaccgccaaggtcaaagacaaaaatattccgtttaccatcacaa |
16657461 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| ||||| ||||||||||||||||| ||||| || ||||| || |||| || |||||||| ||||| |||||||||||||| || |||| |
|
|
T |
16657460 |
tcacttctcttgtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatctatggtgg |
16657361 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcaca |
435 |
Q |
|
|
|||||||||| | ||||||||| ||||| |||||| |
|
|
T |
16657360 |
cttttcgctgcgaatcattgaagtaagctggcaca |
16657326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 52 - 434
Target Start/End: Original strand, 12234665 - 12235047
Alignment:
Q |
52 |
tttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttca |
151 |
Q |
|
|
||||||||||| || |||||||| ||||||| |||| ||||| || ||| |||||||| || ||||| | |||||||| | ||| |||||| | |
|
|
T |
12234665 |
tttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagttta |
12234764 |
T |
 |
Q |
152 |
ccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaa |
251 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||||| ||||| ||||||||||||||||| |
|
|
T |
12234765 |
ccattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggctttaacttggaagacattacctttgattgttaggagagacacatcaaa |
12234864 |
T |
 |
Q |
252 |
agtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcatta |
351 |
Q |
|
|
||| ||||| || |||||||| ||||||||||| | || || |||| | |||||| ||||| |||||||||| ||| ||||| |||| || || |
|
|
T |
12234865 |
agtgccaccgccgagatcaaaaacaaaaatatttcgttctccaacacaatcagttctcttgtcaagaccatatgcaacagcggctgccatgggttcgttc |
12234964 |
T |
 |
Q |
352 |
attattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|||| ||||||||||| || ||||||||| |||||||||| ||||| |||||||| || | ||||||||||||||||||||| |
|
|
T |
12234965 |
attaccctcataacattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcac |
12235047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 453
Target Start/End: Original strand, 7542151 - 7542599
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||||||||||||||| ||||| |||| |||||| |||| || ||||||||||| || |||||||||||||||| |||| ||||| ||| |
|
|
T |
7542151 |
aataaagaatctacctcaatagtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacctcctcaaggcttttggattcc |
7542250 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
|||||||||||| || ||||| | |||||||| | ||||||||||||| ||||||| ||||||||||| ||||| || ||||||||||| |||| ||| |
|
|
T |
7542251 |
cactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgccattctattatcaaagtcttctccaccaaggtgagtgttgccagcagt |
7542350 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
||| ||||||| ||| | || ||||| || || | ||||||||||||||| ||||| ||||||||||| ||||||||||| | ||| ||||| | |
|
|
T |
7542351 |
ggccttaacttggaagttgttgcccttaatcgttagtaaagacacatcaaaagtgccaccgccaagatcaaaaacaaaaatatttcgctctccatcataa |
7542450 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
| |||||| ||||| |||||||||| |||||| ||||| || ||||| ||| ||||||||||| || |||||||||||||| ||||| ||||||| |
|
|
T |
7542451 |
tcagttctcttgtcaaggccatatgcaacagctgcggcagtaggttcattcattgccctcataacattgaggccagcaatggcacccgcatctatagtgg |
7542550 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatt |
453 |
Q |
|
|
||||||| || | |||||| ||||||||||| |||||| ||||||||||| |
|
|
T |
7542551 |
cttttcgttgagaatcattaaaataagcagg----tacagtaacaactgcatt |
7542599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 14703333 - 14703766
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||| ||||||||||| ||||| ||||| |||||| ||||| || |||||||||||||| || |||||||| |||| ||||| ||||| || |
|
|
T |
14703333 |
aataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttggatttc |
14703432 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
||||||||||| | || || | |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
T |
14703433 |
cactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagtcctctcccccgaggtgagtgtttccagcagt |
14703532 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
|| |||| || ||||| || |||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| | || || || | |
|
|
T |
14703533 |
agccttaatttggaagacggtgcccttaattgttaggagagacacgtcaaaagtaccaccaccaagatcaaagacaaatatattacgttctccaccataa |
14703632 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
| |||||| ||||| ||||||||||||||||| || || || ||||| |||| ||||||||||| || || ||||| |||||||||||||||||| |
|
|
T |
14703633 |
tcagttctcttgtcaaggccatatgcaatagctgcagctgtaggttcattcattaccctcataacattgaggccggcaataacaccagcatccatagtgg |
14703732 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|||||| || | |||| | |||||||||||||| |
|
|
T |
14703733 |
cttttctttgagaatcactaaaataagcaggcac |
14703766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 127 - 431
Target Start/End: Complemental strand, 12245523 - 12245219
Alignment:
Q |
127 |
ttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctt |
226 |
Q |
|
|
|||||||||| | |||||||||| |||||||| |||||||| |||||||| || |||||||||||||||| |||||| ||||||| |||| | | | | |
|
|
T |
12245523 |
ttgaactcctgtgcaaagtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaacttggaagatgttatcct |
12245424 |
T |
 |
Q |
227 |
taattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgc |
326 |
Q |
|
|
|||| || |||| ||| || |||||||| ||||||||||||||||| |||||||| || || || || |||| | ||||||| ||||| |||||||| |
|
|
T |
12245423 |
taatagttaggatagaaacgtcaaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaatcagctctcttttcaaggccatatgc |
12245324 |
T |
 |
Q |
327 |
aatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataa |
426 |
Q |
|
|
|| |||||| |||||||| ||||| |||| ||||||||||| ||||||||||| | |||||||| || || ||||||||||| | |||| | |||||| |
|
|
T |
12245323 |
aacagctgcagcagtgggttcattcattaccctcataacattgagaccagcaattgagccagcatctatcgttgcttttcgctgagaatcactaaaataa |
12245224 |
T |
 |
Q |
427 |
gcagg |
431 |
Q |
|
|
||||| |
|
|
T |
12245223 |
gcagg |
12245219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 127 - 286
Target Start/End: Complemental strand, 12258698 - 12258539
Alignment:
Q |
127 |
ttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctt |
226 |
Q |
|
|
|||||||| ||||||||||| |||||||||| ||||||||||||||||| || ||||| |||||||||| || || ||||||| |||||||| | | | |
|
|
T |
12258698 |
ttgaactcttctacaaagtaactcaccattctattatcaaagtcctctcctccaaggtgcgtgtttccagctgtagccttaacttgaaagacattatcct |
12258599 |
T |
 |
Q |
227 |
taattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcc |
286 |
Q |
|
|
|||| || || ||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
12258598 |
taatggttagtagagacacatcaaaagtgccaccaccaagatcaaagacaaaaatattcc |
12258539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 43625337 - 43625770
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||||||||||||||| |||| ||| | || ||||| |||||||| ||| | |||||||| || ||||||||||| | || || | ||| ||| |
|
|
T |
43625337 |
aataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggctcttgagtttc |
43625436 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
| |||| |||||||| |||||||| | || || ||| ||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| ||| |
|
|
T |
43625437 |
caataatatccacattgttcttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagt |
43625536 |
T |
 |
Q |
201 |
ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac |
300 |
Q |
|
|
||||||||| ||||| | | |||||||| || | ||||||||||||||| ||||||||||| ||||||| |||||||| | || || |||| |
|
|
T |
43625537 |
ggctttaacacggaagaccttgtccttaattgtaagtatagacacatcaaaagtaccaccaccaaggtcaaagatgaaaatatttcgttctccaacacaa |
43625636 |
T |
 |
Q |
301 |
ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg |
400 |
Q |
|
|
|| |||||| | ||| || ||||| | ||| || || || || ||||| |||| || | ||||||||| || ||||| ||||| |||| || |||| |
|
|
T |
43625637 |
ttaattctcttgttaaggccgtatgctagagcagcagctgttggttcattgattactcgtaaaacattaaggccgacaatgacaccaacatctatggtgg |
43625736 |
T |
 |
Q |
401 |
cttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|||||||||| | ||||||||| ||||||||||| |
|
|
T |
43625737 |
cttttcgctgagaatcattgaagtaagcaggcac |
43625770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 160 - 428
Target Start/End: Original strand, 11999478 - 11999746
Alignment:
Q |
160 |
ttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccac |
259 |
Q |
|
|
|||||||| |||||||| |||| |||||||||||||| ||||| ||||||| ||||||| | |||||||| || | ||||| ||||||||| |||| |
|
|
T |
11999478 |
ttatcaaaatcctctcctccgaagtgagtgtttccagctgtggccttaacttggaagacattgtccttaattgttagtatagacaaatcaaaagtgccac |
11999577 |
T |
 |
Q |
260 |
caccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattct |
359 |
Q |
|
|
| |||||||||||||| ||||| || || || || |||| | ||||||| ||||| |||||||||| || ||| |||||||| ||||| |||| || |
|
|
T |
11999578 |
cgccaagatcaaagactaaaatgtttctttctccaacacaatcagctctcttgtcaaggccatatgcaacagttgcagcagtgggttcattcattaccct |
11999677 |
T |
 |
Q |
360 |
cataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagc |
428 |
Q |
|
|
|||||||| | |||||||| ||||| ||||| |||||||||||||| || | |||| | |||||||| |
|
|
T |
11999678 |
tataacattgatgccagcaattgcaccggcatctatagtggcttttcgttgagaatcactaaaataagc |
11999746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 17716618 - 17716546
Alignment:
Q |
319 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcat |
391 |
Q |
|
|
||||| ||||| ||||| ||||||||||||||||| |||||||| | ||||||||||||||| |||||||||| |
|
|
T |
17716618 |
ccataagcaatggctgcagcagtgggctcattaataattctcatgaaattaagaccagcaatagcaccagcat |
17716546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 28219843 - 28220038
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||||||||||||||| |||| ||||| || ||||| |||||||| ||||| |||| ||| || ||||||||||||| ||||| | ||| ||| |
|
|
T |
28219843 |
aataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagtttc |
28219942 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccag |
196 |
Q |
|
|
| |||||||||| || |||||||| || ||||||||| | |||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
T |
28219943 |
cagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccag |
28220038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 28220193 - 28220310
Alignment:
Q |
318 |
tccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatca |
417 |
Q |
|
|
||||||||||||||| || |||||||| ||||| | ||| || | |||||| ||||||||||||| ||| ||||| || |||||||| ||||| |||| |
|
|
T |
28220193 |
tccatatgcaatagcagcagcagtgggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggctttccgctgataatca |
28220292 |
T |
 |
Q |
418 |
ttgaaataagcaggcaca |
435 |
Q |
|
|
|||||||||||||||||| |
|
|
T |
28220293 |
ttgaaataagcaggcaca |
28220310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 28220110 - 28220159
Alignment:
Q |
235 |
aggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
284 |
Q |
|
|
||||||||||||||||||||||||||||| || ||||||| |||||||| |
|
|
T |
28220110 |
aggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatt |
28220159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 42555961 - 42555893
Alignment:
Q |
135 |
ctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggc |
203 |
Q |
|
|
|||| ||||||| |||||||| || |||| ||||| |||||| ||||||||||||| ||||| ||||| |
|
|
T |
42555961 |
ctctgcaaagtatttcaccatcctactatccaagtcgtctccctcgaggtgagtgttaccagaggtggc |
42555893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 43744741 - 43744943
Alignment:
Q |
1 |
aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct |
100 |
Q |
|
|
||||||||||||||||||| ||||||||||| || ||||| | |||||| ||||| || ||||| || ||||||||||||| ||| | | ||| ||| |
|
|
T |
43744741 |
aataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttgggtttc |
43744840 |
T |
 |
Q |
101 |
tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt |
200 |
Q |
|
|
| |||||||||| || |||||||| || ||||||||| | |||||||||||||| || |||||||| |||||||| |||||||||||||||||||| || |
|
|
T |
43744841 |
cagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcctccgaggtgagtgtttccagaggt |
43744940 |
T |
 |
Q |
201 |
ggc |
203 |
Q |
|
|
||| |
|
|
T |
43744941 |
ggc |
43744943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 226 - 435
Target Start/End: Original strand, 43744999 - 43745206
Alignment:
Q |
226 |
ttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcct--ctcagcatcacacctacctctcttctcaagtccata |
323 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||| || ||| ||| || | || |||||| || || ||||| |
|
|
T |
43744999 |
ttaattgtaaggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttcttcctc-gca-cagagttagttctcttttccagaccata |
43745096 |
T |
 |
Q |
324 |
tgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaa |
423 |
Q |
|
|
|||||||||||| |||||||| ||||| ||||| ||||||||| ||| |||||||||||||||||||| |||||||||| ||||| |||||||||| |
|
|
T |
43745097 |
tgcaatagctgcagcagtgggttcattgattatcttcataacatcaagcccagcaatggcaccagcatc--tagtggctttccgctgataatcattgaaa |
43745194 |
T |
 |
Q |
424 |
taagcaggcaca |
435 |
Q |
|
|
||||| |||||| |
|
|
T |
43745195 |
taagccggcaca |
43745206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 434
Target Start/End: Original strand, 12528471 - 12528862
Alignment:
Q |
43 |
agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa |
142 |
Q |
|
|
|||||||| || ||| |||||||| ||||||||| |||| || || ||||| |||| | ||||||| || || |||||| | || ||||| | |||| |
|
|
T |
12528471 |
agtgtccttttcgccttctcgcagttagttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctcttaaactctttcacaa |
12528570 |
T |
 |
Q |
143 |
agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga |
242 |
Q |
|
|
||| |||||||||| ||||||||||||||||| || |||||||||| ||| | |||||| || ||||| ||||||| | || | ||| || ||||| |
|
|
T |
12528571 |
agtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttcgaagacattattctttactgtaagaagaga |
12528670 |
T |
 |
Q |
243 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg |
342 |
Q |
|
|
|||||||||||| ||||| ||||| ||||| | |||||| | ||||| || ||| || ||||||| | || |||||||||| ||| |||||||| |
|
|
T |
12528671 |
cacatcaaaagttccaccgccaaggtcaaaaataaaaatccttctctcttcaagacaattagctctcttttgaatgccatatgcaagagcagctgcagtt |
12528770 |
T |
 |
Q |
343 |
ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac |
434 |
Q |
|
|
|| || || ||||| | || ||||| || ||||||||| ||||||||||| | |||||| |||||| | |||||||||||| || ||||| |
|
|
T |
12528771 |
ggttcgttgattatccgtattacattgaggccagcaatgacaccagcatccttggtggctcgtcgctgcgaatcattgaaatacgctggcac |
12528862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 144 - 426
Target Start/End: Original strand, 28910650 - 28910932
Alignment:
Q |
144 |
gtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagac |
243 |
Q |
|
|
|||||||||||| || ||||||| |||||| ||||||||||||||||||||| ||||| ||||||| ||||| | | | | |||||| |||||||| |
|
|
T |
28910650 |
gtagttcaccatcctattatcaatgtcctcgaccccgaggtgagtgtttccagcggtggccttaacttggaagaccttatcctgaattgtaaggagagaa |
28910749 |
T |
 |
Q |
244 |
acatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgg |
343 |
Q |
|
|
|||||||||||||||| ||| || || |||| ||| |||| | || || ||||| | ||||||| || || ||||||| ||||||| | |||||| |
|
|
T |
28910750 |
acatcaaaagtcccactacccaggtcgaagatgaaagtatttcgttctccagcacactcagctctcttgtcgaggccatatgaaatagctacagcagtga |
28910849 |
T |
 |
Q |
344 |
gctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataa |
426 |
Q |
|
|
||||||| ||||| | |||||||||||| | |||||||||||||||| || |||||||| | || | ||||||||||||| |
|
|
T |
28910850 |
gctcattgattatccgcataacattaagcctgacaatggcaccagcatctatggtggctttcctctaagaatcattgaaataa |
28910932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 11133065 - 11133125
Alignment:
Q |
147 |
gttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggcttta |
207 |
Q |
|
|
|||||||||| ||||||||||||| | ||||||||||||||| | ||||| |||||||||| |
|
|
T |
11133065 |
gttcaccattgtgttatcaaagtcttgtcccccgaggtgagtatctccagcagtggcttta |
11133125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 11276197 - 11276270
Alignment:
Q |
319 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
392 |
Q |
|
|
||||||||||| || |||||||| |||||||| ||||||| |||||| || || |||||||| ||||| ||||| |
|
|
T |
11276197 |
ccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacccgcatc |
11276270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 11156507 - 11156574
Alignment:
Q |
313 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaat |
380 |
Q |
|
|
||||| ||||||||||| || ||||||| |||||||| ||||||| ||||||||| || |||||||| |
|
|
T |
11156507 |
tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaat |
11156574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 392
Target Start/End: Original strand, 11170807 - 11170886
Alignment:
Q |
313 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
392 |
Q |
|
|
||||| ||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| ||||| |
|
|
T |
11170807 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatc |
11170886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 11196960 - 11197027
Alignment:
Q |
313 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaat |
380 |
Q |
|
|
||||| ||||||||||| || ||||||| |||||||| ||||||| ||||||||| || |||||||| |
|
|
T |
11196960 |
tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaat |
11197027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 392
Target Start/End: Original strand, 11200125 - 11200204
Alignment:
Q |
313 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
392 |
Q |
|
|
||||| ||||||||||| || ||||||| |||||||| ||||||| || |||||| || |||||||| ||||| ||||| |
|
|
T |
11200125 |
tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacccgcatc |
11200204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 11209635 - 11209708
Alignment:
Q |
319 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
392 |
Q |
|
|
||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| ||||| |
|
|
T |
11209635 |
ccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatc |
11209708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 1128 - 1201
Alignment:
Q |
319 |
ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
392 |
Q |
|
|
||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| ||||| |
|
|
T |
1128 |
ccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacctgcatc |
1201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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