View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10112_low_3 (Length: 491)

Name: NF10112_low_3
Description: NF10112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10112_low_3
NF10112_low_3
[»] chr4 (4 HSPs)
chr4 (104-483)||(30775280-30775655)
chr4 (1-434)||(9335701-9336134)
chr4 (102-435)||(35132474-35132807)
chr4 (308-434)||(23596395-23596521)
[»] chr1 (3 HSPs)
chr1 (1-435)||(4678367-4678800)
chr1 (41-474)||(34466567-34466996)
chr1 (37-434)||(15594995-15595399)
[»] chr7 (34 HSPs)
chr7 (1-434)||(8659288-8659721)
chr7 (1-435)||(8667344-8667778)
chr7 (96-483)||(8585471-8585854)
chr7 (153-474)||(8628609-8628926)
chr7 (1-435)||(8654375-8654809)
chr7 (1-435)||(10494183-10494617)
chr7 (1-435)||(13333265-13333699)
chr7 (1-435)||(1301385-1301823)
chr7 (1-431)||(17260166-17260596)
chr7 (139-435)||(8602037-8602333)
chr7 (103-435)||(8636152-8636484)
chr7 (1-428)||(17267864-17268291)
chr7 (37-434)||(27830685-27831082)
chr7 (43-434)||(8382686-8383077)
chr7 (1-435)||(6789437-6789871)
chr7 (74-431)||(3147262-3147627)
chr7 (37-435)||(8646838-8647236)
chr7 (43-431)||(8545600-8545987)
chr7 (43-431)||(8570278-8570666)
chr7 (138-431)||(8559395-8559688)
chr7 (43-435)||(8576293-8576685)
chr7 (139-431)||(8581763-8582055)
chr7 (43-274)||(29581811-29582042)
chr7 (43-434)||(29577479-29577873)
chr7 (120-435)||(8609961-8610276)
chr7 (151-274)||(8590713-8590836)
chr7 (160-431)||(8538120-8538391)
chr7 (105-271)||(7877706-7877872)
chr7 (306-434)||(8671440-8671568)
chr7 (139-393)||(39985709-39985963)
chr7 (306-435)||(7877542-7877671)
chr7 (325-431)||(8102916-8103022)
chr7 (313-428)||(8017229-8017344)
chr7 (397-434)||(29581651-29581688)
[»] chr2 (10 HSPs)
chr2 (139-474)||(16661766-16662097)
chr2 (1-435)||(16657326-16657760)
chr2 (52-434)||(12234665-12235047)
chr2 (1-453)||(7542151-7542599)
chr2 (1-434)||(14703333-14703766)
chr2 (127-431)||(12245219-12245523)
chr2 (127-286)||(12258539-12258698)
chr2 (1-434)||(43625337-43625770)
chr2 (160-428)||(11999478-11999746)
chr2 (319-391)||(17716546-17716618)
[»] chr5 (4 HSPs)
chr5 (1-196)||(28219843-28220038)
chr5 (318-435)||(28220193-28220310)
chr5 (235-284)||(28220110-28220159)
chr5 (135-203)||(42555893-42555961)
[»] chr8 (3 HSPs)
chr8 (1-203)||(43744741-43744943)
chr8 (226-435)||(43744999-43745206)
chr8 (43-434)||(12528471-12528862)
[»] chr6 (8 HSPs)
chr6 (144-426)||(28910650-28910932)
chr6 (147-207)||(11133065-11133125)
chr6 (319-392)||(11276197-11276270)
chr6 (313-380)||(11156507-11156574)
chr6 (313-392)||(11170807-11170886)
chr6 (313-380)||(11196960-11197027)
chr6 (313-392)||(11200125-11200204)
chr6 (319-392)||(11209635-11209708)
[»] scaffold1207 (1 HSPs)
scaffold1207 (319-392)||(1128-1201)


Alignment Details
Target: chr4 (Bit Score: 295; Significance: 1e-165; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 104 - 483
Target Start/End: Original strand, 30775280 - 30775655
Alignment:
104 taatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggc 203  Q
    |||||||||| || |||||| | || || |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| ||| ||    
30775280 taatgtccacgttgttcttcgtcttaaattcctctacaaagtaattcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagcagttgc 30775379  T
204 tttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacaccta 303  Q
    |||||||||||| |||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
30775380 tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacaccta 30775479  T
304 cctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctt 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
30775480 cctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctt 30775579  T
404 ttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgc 483  Q
    |||||||||||||||||||||||||||||    ||||||| |||||||||||||||||||||||||||||||||||||||    
30775580 ttcgctgtgcatcattgaaataagcaggc----acagtgataactgcatttttaactggggattccaaatacatctctgc 30775655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 434
Target Start/End: Complemental strand, 9336134 - 9335701
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||| |||||||||||||||||| ||||| || ||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| |||||    
9336134 aataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttct 9336035  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
       | |||||||| |||||||||||||| ||||| || ||||| ||||| ||||||||||||||||||||||| || || ||||| |||||||| |  ||    
9336034 gcttgatgtccactttattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggt 9335935  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| |||||||| | |||||| ||||||||||||| ||||||||||||||| || ||||| |||||||||||||||||||| |  | | |||||||     
9335934 ggcttttacttcaaatagatcacccttaattgtgaggatagacacatcaaaagtaccgccacccagatcaaagacaaaaatatttcggttaccatcacag 9335835  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      |  |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| |  || |||||||| |||||||| | ||||||||| || ||||    
9335834 tcatttctcttatcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatctatggtgg 9335735  T
401 cttttcgctgtgcatcattgaaataagcaggcac 434  Q
    | |||||||| | ||||||||| ||||| |||||    
9335734 cctttcgctgagaatcattgaagtaagctggcac 9335701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 102 - 435
Target Start/End: Original strand, 35132474 - 35132807
Alignment:
102 actaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtg 201  Q
    ||||||||| || || |||||  | |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||    
35132474 actaatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttccggcagtg 35132573  T
202 gctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacc 301  Q
    || |||||||  ||||||| | | ||||| || || |  || ||||||||||| |||||||||||||| ||||||||||||||    ||  || ||||      
35132574 gccttaacttggaagacattatccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaagacaaaaatattttgttctccagcacaat 35132673  T
302 tacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggc 401  Q
     |  |||||| ||||| ||||||||||  ||||| ||||| || ||||| |||| ||||||||||||  |||||||||| ||||||||||| ||||||||    
35132674 cagatctcttgtcaaggccatatgcaaccgctgcggcagtaggttcattcattactctcataacattgggaccagcaatagcaccagcatctatagtggc 35132773  T
402 ttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    |||||| || | |||| | |||||||||||||||    
35132774 ttttcgttgagaatcactaaaataagcaggcaca 35132807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 23596521 - 23596395
Alignment:
308 tcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcg 407  Q
    |||| ||||| ||||| |||||||| || ||||||||||| ||||| |||||||| ||||| || |||| |||| ||||||||||| |||| ||||  ||    
23596521 tcttatcaagaccataagcaatagcggcagcagtgggctcgttaataattctcatcacattgagtccagaaatgacaccagcatccttagtagcttgacg 23596422  T
408 ctgtgcatcattgaaataagcaggcac 434  Q
     |||| ||| ||||| || ||||||||    
23596421 ttgtgaatcgttgaagtatgcaggcac 23596395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 4678800 - 4678367
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
4678800 aataaagaatctac-tcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaagggttttgcgttct 4678702  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||    
4678701 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgagtgtttccagcagt 4678602  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| |||||||||||| |||| || ||| | |||| ||||||||||||||| ||||||||||| ||||||||||| ||||| |  | |  |||||      
4678601 ggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagacaaatatatttcgtttacaatcactt 4678502  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      || |||||| ||||  |||||||||||||||||  |||| || || || ||||||   || |||||||| |||||||||||||||||||| || || |    
4678501 tcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtccagcaatggcaccagcatctatggtag 4678402  T
401 cttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    ||||||| || | ||||||||| || |||||||||    
4678401 cttttcgttgagaatcattgaagtatgcaggcaca 4678367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 41 - 474
Target Start/End: Complemental strand, 34466996 - 34466567
Alignment:
41 agagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctac 140  Q
    ||||||||||||||||  ||||||| ||||||||||||||||  || | | | | |||   |||||| |||  ||||| |||| | |||||||||| | |    
34466996 agagtgtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaactcctttgc 34466897  T
141 aaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggaga 240  Q
    ||||| |||| ||||||| ||||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||| | | |||||||| ||||||    
34466896 aaagtggttcgccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggaga 34466797  T
241 gacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcag 340  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |  ||  |  || |   | ||||||| ||||||||||||||||||||||| ||||    
34466796 gacacatcaaaagtcccaccaccaaggtcaaagacgaaaatatttccttcttccacaaagtcagctctcttgtcaagtccatatgcaatagctgcagcag 34466697  T
341 tgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacag 440  Q
    |||| ||||| ||||||  || ||||||||| |||||||| | ||||||||||| ||| ||||||||||| | |||||| ||||||||||||    || |    
34466696 tgggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatccacagtagcttttcgctgagaatcattaaaataagcaggc----acgg 34466601  T
441 tgacaactgcatttttaactggggattccaaata 474  Q
    ||| ||||||||| |||| ||| |||||||||||    
34466600 tgataactgcattcttaattggtgattccaaata 34466567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 37 - 434
Target Start/End: Original strand, 15594995 - 15595399
Alignment:
37 aaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcct 136  Q
    |||||||||  ||| |||||||| ||||| ||||||||||| ||||  ||||   ||| ||||  | |||| ||||| || |||||| | ||||| ||||    
15594995 aaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgttcttcgtcttgaattcct 15595094  T
137 ctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag 236  Q
       |||||||||| |||||||||||||||||||||||||| || ||||||||||||||    ||||| |||||||  ||||| |   | |||||||| ||    
15595095 gcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtgagtgtttccgcctgtggccttaacttggaagaccttgtccttaattgttag 15595194  T
237 gagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg-- 334  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||| || ||  || ||||  ||   ||||| ||||| ||||||||||||||||      
15595195 gatagacacatcaaaagtgccaccaccaagatcaaagacaaaaatatttctttctccaacacagttaatcctcttgtcaaggccatatgcaatagctgca 15595294  T
335 -----ctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagca 429  Q
         | || || || ||||| ||||  |  ||||||||||| |||||||||||||| ||||| |||||||||||||| || | |||||||| |||||||    
15595295 gctgtcagctgtcggttcattgattacccgtataacattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagca 15595394  T
430 ggcac 434  Q
    |||||    
15595395 ggcac 15595399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 8659288 - 8659721
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||      
8659288 aataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttgggttac 8659387  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||    
8659388 cactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtgagtgtttccagaagt 8659487  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| ||||||||||||||||| || ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||||||    | | |||||||     
8659488 ggcttttacttcaaagacatcacccttcattgtaaggatagacacatcaaaagtaccaccaccaagatcaaagaccaaaatattttgtttaccatcacag 8659587  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      ||||||||| ||||  ||||||||||||||||| ||||| || |||||||||||    || |||||||| |||||||||||||| | ||| || ||||    
8659588 tcacctctcttgtcaaaaccatatgcaatagctgcagcagtaggttcattaattatctgaatgacattaaggccagcaatggcaccggaatctatggtgg 8659687  T
401 cttttcgctgtgcatcattgaaataagcaggcac 434  Q
    |||||||||| | ||||||||| || ||||||||    
8659688 cttttcgctgagaatcattgaactatgcaggcac 8659721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 8667344 - 8667778
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||| |||||||||||||||||| ||||| || ||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| |||||    
8667344 aataaagcatctacctcaacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttct 8667443  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     ||| |||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||| | |||    
8667444 gactgatgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaaggtgagtgtttcctgcagt 8667543  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |    | |||||||     
8667544 ggctttcacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtcccgccacccagatcaaagacaaaaatatttcggctaccatcacag 8667643  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      |  |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| |  || |||||||| |||||||| | ||||||||| || ||||    
8667644 tcatttctcttgtcaaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatctatggtgg 8667743  T
401 cttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    | |||||||| | ||||||||| ||||| ||||||    
8667744 cctttcgctgagaatcattgaagtaagctggcaca 8667778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 96 - 483
Target Start/End: Complemental strand, 8585854 - 8585471
Alignment:
96 gttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttcca 195  Q
    ||||||| |||| |||||||| |||||  | || || ||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||    
8585854 gttcttagtaatatccacattgttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttcca 8585755  T
196 gaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcat 295  Q
    |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |  ||| |||    
8585754 gcggttgctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccat 8585655  T
296 cacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccat 395  Q
    ||||  ||||| | || ||||| ||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||    
8585654 cacagttacctttgttgtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatccat 8585555  T
396 agtggcttttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatttttaactggggattccaaatacatctctgc 483  Q
     |||||||||||||| | |||||||||||||||||||    ||||| ||||||||||||| ||| || |||| ||||||  |||||||    
8585554 ggtggcttttcgctgagaatcattgaaataagcaggc----acagtcacaactgcattttgaacaggtgatttcaaatatgtctctgc 8585471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 153 - 474
Target Start/End: Original strand, 8628609 - 8628926
Alignment:
153 cattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa 252  Q
    |||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
8628609 cattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa 8628708  T
253 gtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaa 352  Q
    |||||||||||||||||||| ||||||||||| |  ||| |||||||||||||| | || ||||| ||||||||||||||||| |||||||| ||||| |    
8628709 gtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacacctacctttgttgtcaaggccatatgcaatagctgcagcagtggggtcattga 8628808  T
353 ttattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcat 452  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||| | |||||||||||||||||||||     |||||||||||||    
8628809 ttatcctcataacattaaggccagcaatggcaccagcattcatggtggcttttcgctgagaatcattgaaataagcaggcacg----gtgacaactgcat 8628904  T
453 ttttaactggggattccaaata 474  Q
    |||| || || |||| ||||||    
8628905 tttttacaggtgatttcaaata 8628926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 8654375 - 8654809
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| ||||| |||      
8654375 aataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttac 8654474  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
      ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||||||| |||    
8654475 cgctaatttccactttattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctccccctaggtgcgtgtttccagcagt 8654574  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| || |||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||| || ||||||||||  | | ||||| |     
8654575 ggcttttacgtcaaagacatcacccttaattgtgagtatagacacatcaaaagtaccaccaccaagatcaaataccaaaatattccgtttaccatcatag 8654674  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
     ||| || ||| ||||| ||||||||||||||||| ||||| || ||||| | ||| |  || || ||||| |||||||||||||||||||| || || |    
8654675 ttacttcgcttgtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatctatggttg 8654774  T
401 cttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    |||||||||| |  |||||||| || || ||||||    
8654775 cttttcgctgagagtcattgaagtatgccggcaca 8654809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 10494617 - 10494183
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||| ||| |||||||| ||||||||||| |  ||||||||| |||| ||||||||||| ||||||||||||||||||| ||||| |||||  |||     
10494617 aataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcc 10494518  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     ||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||| ||||||||||| || | |||    
10494517 cactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcagt 10494418  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| |  | | | |||||     
10494417 ggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccagatcaaagacaaaaatatttcggttaccctcacaa 10494318  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      || |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| |  || |||||||| |||||||| ||||||||||| ||||| |    
10494317 tcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatcaatagtag 10494218  T
401 cttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    | ||||| || | ||| ||||| ||||| ||||||    
10494217 cctttcgttgagaatcgttgaagtaagccggcaca 10494183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 13333699 - 13333265
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||| |||||| ||||||||||||||||| |  || |||||| |||| ||| ||||||| ||||||||||||||||||| ||||| ||||| ||||     
13333699 aataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaaggattttgggttcc 13333600  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     ||| || || || ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| |  ||    
13333599 cactgatatcgacgttattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctcccccaaggtgagtgtttcctgcggt 13333500  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| |||||||||||||||||  ||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||| | || | |||||||     
13333499 ggcttttacttcaaagacatcacccataattgtaaggatagacacatcaaaagtaccaccacccagatcaaagacaaaaatatttcgcttaccatcacaa 13333400  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      || |||||| ||||| ||||||||||||||||| ||||| || ||||| |||||||  || | |||||| |||||||| ||||||||||| || ||||    
13333399 tcacgtctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatctatggtgg 13333300  T
401 cttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    | |||||||| | ||||||||| ||||| ||||||    
13333299 cctttcgctgagaatcattgaagtaagccggcaca 13333265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 1301385 - 1301823
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||||||| |||||||| |||||||| || || |||||||||||||| ||||||||||| || ||| |||||||||||| ||||| |||   |||      
1301385 aataaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttac 1301484  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| || |||||||| ||||||  |||    
1301485 cactaatgtccactttattcttctttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttccaccagt 1301584  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| |||||||||||||| || || || || |||| ||||||||||||||| ||||| ||||| |||||||| ||||||||||  | | |||||||     
1301585 ggcttttacttcaaagacatcgcccttgatggtaaggatagacacatcaaaagtaccaccgccaaggtcaaagaccaaaatattccgtttaccatcacag 1301684  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcag----tgggctcattaattattctcataacattaagaccagcaatggcaccagcatccata 396  Q
      || |||||| ||||  ||||| ||||||||||| ||||    | || |||||||||||    || |||||||| |||||||| ||||| ||||| ||     
1301685 tcacttctcttgtcaaaaccatacgcaatagctgcagcagtagctaggttcattaattatctgaatgacattaaggccagcaattgcaccggcatctatg 1301784  T
397 gtggcttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    |||||||||||||| | |||||||||||  |||||||||    
1301785 gtggcttttcgctgagaatcattgaaatgtgcaggcaca 1301823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 431
Target Start/End: Original strand, 17260166 - 17260596
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    |||||||  |||||||||||| |||| ||| |||| ||||| |||||||| |||||  | || || |||||||||||||||| ||||| ||||| ||||     
17260166 aataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggttcc 17260265  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     | |||||||||  || ||| |  |||||| |||||||||||| |||| ||||||||| |||||||||||||| ||||| || ||||||| ||||   ||    
17260266 caataatgtccaattttttcgttcttttgatctcctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctccaccggt 17260365  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    ||| |||||||| ||||| | | | |||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||   |   | ||||     
17260366 ggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtccccccaccaaggtcaaagacaaaaatattccgtacttaaacacaa 17260465  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
     ||  ||||||  |||| ||||||||||||||||| ||| | || ||||||||||   ||| ||||| ||| ||||||||  |||||||||| || ||||    
17260466 ttagttctcttgacaaggccatatgcaatagctgcagcaataggttcattaattaacttcaaaacataaaggccagcaataacaccagcatctatggtgg 17260565  T
401 cttttcgctgtgcatcattgaaataagcagg 431  Q
    |||||||||| | ||||||||||||||||||    
17260566 cttttcgctgagaatcattgaaataagcagg 17260596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 139 - 435
Target Start/End: Original strand, 8602037 - 8602333
Alignment:
139 acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga 238  Q
    ||||||| ||||||||||| |||||||||||||||||| || ||||| |||| ||| |||||||| || |||||||||| || |   ||||||||||| |    
8602037 acaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgagaa 8602136  T
239 gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc 338  Q
    |||| ||||||||||| ||||||||||||||||| |  |||||||| |||||  || ||||  || ||||||| | ||| |||||||||| ||| |||||    
8602137 gagaaacatcaaaagttccaccaccaagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcagctgc 8602236  T
339 agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    ||| |||||||| ||||| | ||| ||||| |||||||||||||||||||||||  | |||||||||||||| | |||||| |||||||| ||||||    
8602237 agttggctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggcaca 8602333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 103 - 435
Target Start/End: Complemental strand, 8636484 - 8636152
Alignment:
103 ctaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtgg 202  Q
    |||||||| || || |||||| | ||||  ||||||||||| || | ||||||||||||||||||||||||||| || ||||| |||| ||| | |||||    
8636484 ctaatgtctaccttgttcttcctcttgatttcctctacaaaatattccaccattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtgg 8636385  T
203 ctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacct 302  Q
    |||||||||||||||| |||||||||||| |||| | |||||| || || || ||||||||||||||||| || ||||| || |||||   | ||||  |    
8636384 ctttaacttcaaagacttcacctttaattttgagtatagacacgtcgaatgtaccaccaccaagatcaaatacgaaaatgtttctctctttaacacagtt 8636285  T
303 acctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggct 402  Q
    ||||||||| | ||||||||| |||| |||||| ||||| || ||||| ||||| |  || |||||||| || |||||||||||||||||  | |||| |    
8636284 acctctcttttgaagtccatacgcaaaagctgcagcagttggttcattgattatccgaattacattaaggccggcaatggcaccagcatctttggtggat 8636185  T
403 tttcgctgtgcatcattgaaataagcaggcaca 435  Q
    || ||||| | ||||||||||||||| ||||||    
8636184 ttacgctgagaatcattgaaataagcgggcaca 8636152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 428
Target Start/End: Original strand, 17267864 - 17268291
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    |||||||  |||||||||||| |||| ||| |||||||||| |||||||| |||||  | || || ||||||||||||||||  | || ||||| ||||     
17267864 aataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggttcc 17267963  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     |  ||| | ||  || || ||| ||||||  ||||| ||||| ||||  |||||||| |||||||||||||| ||||| || ||||||| ||||   ||    
17267964 caacaattttcaatttttttttccttttgatttcctcaacaaaatagtataccattctattatcaaagtcctcacccccaagatgagtgtctccaccggt 17268063  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    ||| |||||||| ||||| | | | |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||  ||  || ||||     
17268064 ggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtcccaccaccaaggtcaaagacaaaaatattccgttcttcaacacag 17268163  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
     ||  ||||||  |||| ||||||||||||||||| ||||| || ||||| ||||   |||  |||||||| ||||||||| |||||||||| || ||||    
17268164 ttagttctcttgccaaggccatatgcaatagctgcagcagttggttcattgattaccttcaatacattaaggccagcaatgacaccagcatctatggtgg 17268263  T
401 cttttcgctgtgcatcattgaaataagc 428  Q
    |||||||||| | ||| ||||| |||||    
17268264 cttttcgctgagaatcgttgaagtaagc 17268291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 37 - 434
Target Start/End: Complemental strand, 27831082 - 27830685
Alignment:
37 aaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcct 136  Q
    |||||||||||||| |||||| |||| ||    ||||||| |||||  |||| | ||| ||||  ||||||||||||  | |||||||| |||||| |||    
27831082 aaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttcttcttcttgaacacct 27830983  T
137 ctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag 236  Q
    | ||||| ||||||||||| || ||||||||||||||||| || |||||||||||||||| ||| || |||||||  ||||| | | | |||||||| |     
27830982 ccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtgagtgtttccagcagttgccttaacttggaagaccttatccttaattgtaac 27830883  T
237 gagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgct 336  Q
     ||||||||||||||||||||||||||||| ||||| |||||||||||||  ||  ||  | |  |   || | | ||||| |||||||||||||||||     
27830882 aagagacacatcaaaagtcccaccaccaaggtcaaacacaaaaatattccgttctccagtatattttgttcccgtgtcaaggccatatgcaatagctgca 27830783  T
337 gcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac 434  Q
    ||||| |||||  | ||||| | |||||||||||| |||||||||||||| | ||| | |||||||||||| || |  |||||||||||||| |||||    
27830782 gcagtaggctcgcttattatccgcataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagagtcattgaaataagctggcac 27830685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 43 - 434
Target Start/End: Complemental strand, 8383077 - 8382686
Alignment:
43 agtgtcctctttgccctctcgcaggcagttctcaacctccataagggt-tttgcgttcttactaatgtccacattattcttctttttgaactcctctaca 141  Q
    |||||||| |||||||||||||| || ||||| ||||| | |||| |  |||| ||||  ||||||||||  ||||| |||| | |||||||| || |||    
8383077 agtgtcctttttgccctctcgcaagccgttcttaaccttc-taagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaaca 8382979  T
142 aagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagag 241  Q
    ||||| ||||| ||||||||||| ||||| || || || || ||||||| ||| | |||||| || ||  ||||||||| |   ||||||||||||||||    
8382978 aagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgaggagag 8382879  T
242 acacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagt 341  Q
    ||||||||||||| |||||||||||||||||||  |||||||| |||||  ||  |||  || ||||||||| ||| |||||||||| ||| || |||||    
8382878 acacatcaaaagttccaccaccaagatcaaagatgaaaatatttctctcttcaagacaattagctctcttctgaaggccatatgcaagagcagcggcagt 8382779  T
342 gggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac 434  Q
     |||||||| ||||| | ||| ||||| || |||||||| |||||||||||  | |||||||| || || | |||||||||||| ||||||||    
8382778 tggctcattgattatccgcattacattgaggccagcaatcgcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcac 8382686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 6789437 - 6789871
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    |||||||| |||||||||| ||| ||||| |   | |||||||||  ||| || ||||| || || |||||||||||||| | |||||   ||| |||      
6789437 aataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccctttcacacgcagttctcaaccttcttaaggcccttgagtttc 6789536  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     | |||| ||||| || |||||| | || ||||||||| |||||||||| |||| || |||||||||||||||||| ||||||||||||||||||   ||    
6789537 cagtaatatccactttgttcttcctcttaaactcctctgcaaagtagtttaccaatcggttatcaaagtcctctcctccgaggtgagtgtttccaccggt 6789636  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    ||| |||||||  ||||| | | |||| ||||| | || ||||||||| ||||| ||||||||||| || ||||| ||||||||  | ||  || |  |     
6789637 ggccttaacttggaagaccttatctttgattgttaagatagacacatcgaaagtgccaccaccaaggtcgaagacgaaaatatttttttctccaccgtaa 6789736  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
     ||  |||||| ||||| |||||||||| ||| || || || || ||||| |||||||  |||||||||||||||||||||||||||||||| | |||||    
6789737 ttagttctcttatcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtgg 6789836  T
401 cttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    |||| || || | ||||||||||||||||||||||    
6789837 ctttccgttgagaatcattgaaataagcaggcaca 6789871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 74 - 431
Target Start/End: Original strand, 3147262 - 3147627
Alignment:
74 tcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctc 173  Q
    ||||||||| ||||| | ||| ||||| ||||||||| || || |||||||| || ||||||  | |||||||||||||||| || ||||||||||||||    
3147262 tcaacctccttaaggctcttgagttctcactaatgtctaccttgttcttcttcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctc 3147361  T
174 tcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaag 273  Q
    |||||| ||||| |||||||| |   |||| ||||||| |||||| | | | |||||||| || |||||||||||||||||||||||||| |  ||||||    
3147362 tcccccaaggtgggtgtttcctgcgatggccttaacttgaaagaccttatccttaattgtaagaagagacacatcaaaagtcccaccacccaagtcaaag 3147461  T
274 acaaaaatat-----tcctct-cagcat--cacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataac 365  Q
    | ||||||||     |||||| ||  ||  ||||  ||  |||||| || |||||||| ||||||||||| ||||| || ||||| ||||| | |||||     
3147462 ataaaaatattacgctcctctacacaattacacaattagttctcttgtccagtccatacgcaatagctgcagcagtaggttcattgattatccgcataat 3147561  T
366 attaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg 431  Q
    |||||| ||||||||  |||||||||| || || ||||| ||||| ||||||||||||||||||||    
3147562 attaaggccagcaataacaccagcatctattgtcgctttccgctgagcatcattgaaataagcagg 3147627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 37 - 435
Target Start/End: Original strand, 8646838 - 8647236
Alignment:
37 aaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcct 136  Q
    ||||| |||||||| ||||| |||||||| || ||||||||||||| ||||| | ||| |||   | |||||||||| || |||||||| || || || |    
8646838 aaagatagtgtcctttttgctctctcgcatgccgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattctt 8646937  T
137 ctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag 236  Q
     | |||||| || |||||||||  |||||||||||||||| |||||||||||||||||||  ||||||||||| | |||||| | | | |||||||| ||    
8646938 gtgcaaagtggtccaccattctactatcaaagtcctctcctccgaggtgagtgtttccagcggtggctttaacatgaaagaccttatccttaattgtaag 8647037  T
237 gagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgct 336  Q
    |||||||||||||||||| ||||||||||| || ||||  || ||||| |  ||  || ||||  |   |||||| ||||| |||||||| | ||| ||     
8647038 gagagacacatcaaaagttccaccaccaaggtcgaagatgaatatatttcgttcttcagcacaatttgttctcttgtcaaggccatatgcgagagcagca 8647137  T
337 gcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    || || || ||||| ||||| |  || | |||||| ||||||||||| || ||||| |||||||||||||||||   ||||||||| || |||||||||    
8647138 gctgttggttcattgattatccggatgatattaaggccagcaatggccccggcatctatagtggcttttcgctgataatcattgaagtatgcaggcaca 8647236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 43 - 431
Target Start/End: Original strand, 8545600 - 8545987
Alignment:
43 agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa 142  Q
    |||||||| |||||| |||| |||||||||||||||||||  |||| || || ||||  |||||| ||| |||| |||||| | ||||||||||  ||||    
8545600 agtgtcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaa 8545699  T
143 agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga 242  Q
    |||| ||||||||||||||||||||||| || || || |||| ||||| ||||| |||||| || || |||||||| | |  ||||||||| || | |||    
8545700 agtaattcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtggccttgacatcaaagaccttatttttaattgtaagaataga 8545799  T
243 cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg 342  Q
    |||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || | ||  || ||||||| | ||| |||||||||| ||| || |||||     
8545800 cacatcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaac-caattagctctcttttgaaggccatatgcaagagccgccgcagtc 8545898  T
343 ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg 431  Q
    || ||||| ||||| | ||| ||||| ||||| |||||  |||| |||||  | |||| | || | |||| |||||| |||||||||||    
8545899 ggttcattgattatccgcatgacatttagaccggcaatttcacctgcatcttttgtggatctttgttgtgaatcattaaaataagcagg 8545987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 43 - 431
Target Start/End: Original strand, 8570278 - 8570666
Alignment:
43 agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa 142  Q
    |||||||| ||||||||||| || || ||||| |||||||  |||| ||||| |||| ||||||| ||| | || |||||||| ||||||| ||  ||||    
8570278 agtgtcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttcacaa 8570377  T
143 agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga 242  Q
    |||   ||| ||||||||||||||| || || || || |||||||||| ||||| |||||| || |||||| ||   | | | |||| |||||| | |||    
8570378 agtgagtcaacattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttcatagttgttatccttaactgtgagaataga 8570477  T
243 cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg 342  Q
    |||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || || |  || ||||||| | ||| |||||||||| |||||| |||||     
8570478 cacatcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaacaaaattagctctcttttgaaggccatatgcaagagctgccgcagtc 8570577  T
343 ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg 431  Q
    || ||||| ||||| | ||| ||||| |||||||||||  |||| |||||  |||||||| |||| |||| |||||| |||||||||||    
8570578 ggttcattgattatccgcattacattgagaccagcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg 8570666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 138 - 431
Target Start/End: Original strand, 8559395 - 8559688
Alignment:
138 tacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagg 237  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||| || |||||||||| || |   |||||||||||     
8559395 tacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgaga 8559494  T
238 agagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctg 337  Q
    ||||| ||||||||||| |||||||| ||||||||||  |||||||| |||||   | ||||  ||  |||||| | |||||||||||||| ||| ||||    
8559495 agagaaacatcaaaagttccaccaccgagatcaaagatgaaaatatttctctctttaacacaattagatctcttttgaagtccatatgcaagagcagctg 8559594  T
338 cagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg 431  Q
    |||| || ||||| |||||   ||| |||||||||||||||||  |||| |||||  | |||||| |||  || | |||||| |||||||||||    
8559595 cagttggttcattgattatctgcattacattaagaccagcaatttcacctgcatctttggtggctcttctttgagaatcattaaaataagcagg 8559688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 43 - 435
Target Start/End: Original strand, 8576293 - 8576685
Alignment:
43 agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa 142  Q
    |||||||| |||||| | || || |||||||||||||||| ||||| |||||  |||| |||||| ||| | || | ||| ||  |||||||||  ||||    
8576293 agtgtcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaa 8576392  T
143 agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga 242  Q
    |||  | ||||||| ||||||||||||| |  || || |||||||||| ||| | |||||| || ||||| |||||||     |||| |||||| | |||    
8576393 agtgatccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggccttgacttcgaagacattgttcttaactgtgagaataga 8576492  T
243 cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg 342  Q
    |||||||||||| ||||| ||||| ||||||| ||||||||| || | | || ||||  || ||||||| | ||| ||||| |||| |||||| |||||     
8576493 cacatcaaaagttccaccgccaaggtcaaagataaaaatatttcttttatcaacacaattagctctcttttgaaggccatacgcaagagctgccgcagtc 8576592  T
343 ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    || ||||| |||||   ||| ||||| ||||||||||| ||||| |||||  |||||||| |||| || | |||||| |||||||||||||||    
8576593 ggttcattgattatctgcatgacattgagaccagcaattgcacctgcatctttagtggctcttcgttgggaatcattaaaataagcaggcaca 8576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 139 - 431
Target Start/End: Original strand, 8581763 - 8582055
Alignment:
139 acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga 238  Q
    |||||||  |||||||||||||||||||| || || || || |||||||||| ||||| |||||| || |||||| || | | |   |||| |||||| |    
8581763 acaaagtgattcaccattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagtggccttgacttcatagtcgttattcttaactgtgagaa 8581862  T
239 gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc 338  Q
     ||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || ||||  || ||||||| | ||| |||||||||| |||||| ||    
8581863 tagacacatcaaaagttccacctccaaggtcaaagataaaaatatttctcttatcaacacaattagctctcttttgaaggccatatgcaagagctgccgc 8581962  T
339 agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg 431  Q
    ||| || ||||| ||||| | ||| ||||| ||||| |||||  |||| |||||  |||||||| |||| |||| |||||| |||||||||||    
8581963 agtcggttcattgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg 8582055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 43 - 274
Target Start/End: Complemental strand, 29582042 - 29581811
Alignment:
43 agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa 142  Q
    |||||||||||||||||||| || || ||||||| | ||| ||| | ||||| ||||  ||||||||||| ||| |||||| | || ||||| |   |||    
29582042 agtgtcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaa 29581943  T
143 agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga 242  Q
    |||| |||||||||| |||||||||||||||||| || |||||||| |  |||| |||||| || ||||||||   |||| | || | |||||| |||||    
29581942 agtaattcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaaacttatcatccttgagtgtgagaagaga 29581843  T
243 cacatcaaaagtcccaccaccaagatcaaaga 274  Q
    |||||||||||| |||||||||||||||||||    
29581842 cacatcaaaagtgccaccaccaagatcaaaga 29581811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 43 - 434
Target Start/End: Complemental strand, 29577873 - 29577479
Alignment:
43 agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa 142  Q
    |||| ||||||||||||||| || |||||||||| | ||| ||| | ||||| ||||  ||||||||||||||| |||||| | || ||||| |  ||||    
29577873 agtgccctctttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaa 29577774  T
143 agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga 242  Q
    ||| | |||||||| | ||||| ||||||||||| || |||||||| |  |||| |||||| || ||||||||   |||| | |||| |||||| |||||    
29577773 agtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatcatccttaagtgtgagaagaga 29577674  T
243 cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctct---cagcatcacacctacctctcttctcaagtccatatgcaatagctgctgca 339  Q
    ||||||||| || |||||||||||||||||||  || | ||| | ||   || || || |  |||||||||| | || |||||||||||  || || |||    
29577673 cacatcaaaggtgccaccaccaagatcaaagatgaatacatttcgctttccaacaacaaaattacctctcttttgaattccatatgcaagtgcagcagca 29577574  T
340 gtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac 434  Q
    || || ||||| ||||| | ||| ||||| || ||||||||    || |||||  | |||||||||||||| | ||||||||||||||| |||||    
29577573 gttggttcattgattatccgcattacattgaggccagcaataatgccggcatctttggtggcttttcgctgagaatcattgaaataagctggcac 29577479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 120 - 435
Target Start/End: Original strand, 8609961 - 8610276
Alignment:
120 cttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagaca 219  Q
    |||| ||||||||||||  |||||||  || |||||||||| ||||||||||||||| || |||||||| | ||||| ||| || || || || ||  ||    
8609961 cttccttttgaactccttcacaaagtgattaaccattctgtgatcaaagtcctctcctccaaggtgagtatctccagcagtagccttgacatcgaaagca 8610060  T
220 tcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtc 319  Q
    |    |||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||||||| || |   |  ||||  || ||||||||| ||| |    
8610061 ttgtttttaattgtgagaacagacacatcgaaagtcccaccaccaagatcaaagataaaaatatttctattttccacacaattagctctcttctgaagac 8610160  T
320 catatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcatt 419  Q
    ||||||||| ||| || || || || ||||| || || |  || |||||||| |||| |||| ||||||||||  | |||||||| ||||| | ||||||    
8610161 catatgcaagagccgcagccgttggttcattgataatccggattacattaaggccagaaatgacaccagcatcttttgtggctttccgctgagaatcatt 8610260  T
420 gaaataagcaggcaca 435  Q
     |||||||||||||||    
8610261 aaaataagcaggcaca 8610276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 8590713 - 8590836
Alignment:
151 accattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaa 250  Q
    |||||||||||||||||||||||||| || ||||| || | ||| ||||||||||| || ||||||  ||||||||| | |||||| |||||||||||||    
8590713 accattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaagagacacatcaa 8590812  T
251 aagtcccaccaccaagatcaaaga 274  Q
    |||| |||||||||||||||||||    
8590813 aagtgccaccaccaagatcaaaga 8590836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 431
Target Start/End: Original strand, 8538120 - 8538391
Alignment:
160 ttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccac 259  Q
    ||||||||||||||||| || |||||||| | ||| | |||||| || |||  |||| ||| |   || | ||| |||||||| ||||||||||| ||||    
8538120 ttatcaaagtcctctcctccaaggtgagtatctccggcagtggccttgactgtaaaggcattattcttcaatgtaaggagagatacatcaaaagttccac 8538219  T
260 caccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattct 359  Q
    |||||||||||||||  ||||  || |||||  || ||||  || ||||||| | ||| || ||||||| ||| || || || || ||||| ||||| |     
8538220 caccaagatcaaagatgaaaacttttctctcttcaacacaattagctctcttttgaaggccgtatgcaagagcagcagctgtaggttcattgattatccg 8538319  T
360 cataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg 431  Q
    ||| ||||| || ||||||||| ||||||||||  | |||||| ||||||||| ||||||||||||||||||    
8538320 cattacattgaggccagcaatgacaccagcatctttggtggctcttcgctgtgaatcattgaaataagcagg 8538391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 105 - 271
Target Start/End: Complemental strand, 7877872 - 7877706
Alignment:
105 aatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggct 204  Q
    ||||||||| ||||||||| | || ||||||   || || | ||||| |||||||||||||||||||||||| || |||||||| | ||| | ||| |||    
7877872 aatgtccactttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagct 7877773  T
205 ttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaa 271  Q
     | || ||||||  |||| |||| | |||||| ||||||||||| ||||| ||||||||||||||||    
7877772 attacatcaaagctatcatcttttagtgtgagaagagacacatcgaaagtgccaccaccaagatcaa 7877706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 8671568 - 8671440
Alignment:
306 tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt 405  Q
    |||||| ||||| ||||||||||||||||| ||||| || ||||| ||||| |  || |||||||| |||||||| | ||||||||| || |||||  ||    
8671568 tctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatcaatggtggccgtt 8671469  T
406 cgctgtgcatcattgaaataagcaggcac 434  Q
    ||||| | ||||||||| ||||| |||||    
8671468 cgctgagaatcattgaagtaagctggcac 8671440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 393
Target Start/End: Original strand, 39985709 - 39985963
Alignment:
139 acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga 238  Q
    ||||||| ||||||||||||||| ||||| ||||| || || || || |||| ||| |  |||||||| || ||||||| | |  ||| ||| || || |    
39985709 acaaagtggttcaccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagca 39985808  T
239 gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc 338  Q
     ||| ||||||||||| ||||||||||| |||||||  || | |||| ||||  || |||   |  || |||| ||||| ||||| ||||| || || ||    
39985809 aagagacatcaaaagtaccaccaccaaggtcaaagatcaagacattcttctctccaacactggttgctttcttgtcaagaccataagcaatggcagcagc 39985908  T
339 agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatcc 393  Q
    |||||||||||| || |||| ||| ||||||||||| |||||  | |||||||||    
39985909 agtgggctcattgataattcgcatgacattaagaccggcaataactccagcatcc 39985963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 7877671 - 7877542
Alignment:
306 tctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggctttt 405  Q
    |||||| | ||| ||||||||||  || || ||||| || ||||||||||| | ||||||||| || || ||||  |||||||||||  | |||||||||    
7877671 tctcttttgaaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagcatcttttgtggctttt 7877572  T
406 cgctgtgcatcattgaaataagcaggcaca 435  Q
    || || | ||||||||||||||| ||||||    
7877571 cgttgagaatcattgaaataagccggcaca 7877542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 8102916 - 8103022
Alignment:
325 gcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaat 424  Q
    |||||||| || ||||| ||||||||||| ||||||| |||||| | |||||| ||  ||||||||||  |||| ||||  ||||| | ||||||||| |    
8102916 gcaatagcagcagcagttggctcattaataattctcaaaacatttaaaccagcgataacaccagcatctttagttgcttgacgctgagaatcattgaagt 8103015  T
425 aagcagg 431  Q
    |||||||    
8103016 aagcagg 8103022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 428
Target Start/End: Complemental strand, 8017344 - 8017229
Alignment:
313 tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtg 412  Q
    |||||||| || ||||||||||| || || ||||| || || ||||||| |||||| || || |||||| |||| |||||| | |||||||  ||||| |    
8017344 tcaagtccgtacgcaatagctgcagctgttggctcgttgataattctcaaaacattgagtcctgcaatgacaccggcatcctttgtggcttgacgctgcg 8017245  T
413 catcattgaaataagc 428  Q
     ||||||||| |||||    
8017244 aatcattgaagtaagc 8017229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 29581688 - 29581651
Alignment:
397 gtggcttttcgctgtgcatcattgaaataagcaggcac 434  Q
    |||||||||||||| | |||||||||||||||||||||    
29581688 gtggcttttcgctgagaatcattgaaataagcaggcac 29581651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 223; Significance: 1e-122; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 139 - 474
Target Start/End: Complemental strand, 16662097 - 16661766
Alignment:
139 acaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga 238  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16662097 acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga 16661998  T
239 gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgc 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||  ||| ||| || ||||| ||||||||||||||||||||    
16661997 gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctgctgc 16661898  T
339 agtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcacatac 438  Q
    |||||| ||||| ||||| |||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| | ||| || |||||||||||     ||    
16661897 agtgggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcagg----aac 16661802  T
439 agtgacaactgcatttttaactggggattccaaata 474  Q
    ||||||||||||||||||||| || |||||||||||    
16661801 agtgacaactgcatttttaaccggtgattccaaata 16661766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 16657760 - 16657326
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||  |||| | ||| ||||     
16657760 aataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttgagttcc 16657661  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     ||| |||||||| |||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | |||    
16657660 cacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagtgtttccggcagt 16657561  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||| || ||||| |||||||| |||||||| |||| ||||||||||||||| ||||| ||||| |||||||||||||||||||  | | |||||||     
16657560 ggcttttacctcaaaaacatcacccttaattgtaaggatagacacatcaaaagtaccaccgccaaggtcaaagacaaaaatattccgtttaccatcacaa 16657461  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      || |||||| ||||| ||||||||||||||||| ||||| || ||||| || ||||  || |||||||| ||||| |||||||||||||| || ||||    
16657460 tcacttctcttgtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatctatggtgg 16657361  T
401 cttttcgctgtgcatcattgaaataagcaggcaca 435  Q
    |||||||||| | ||||||||| ||||| ||||||    
16657360 cttttcgctgcgaatcattgaagtaagctggcaca 16657326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 52 - 434
Target Start/End: Original strand, 12234665 - 12235047
Alignment:
52 tttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttca 151  Q
    ||||||||||| || |||||||| |||||||  |||| |||||  ||   ||| |||||||| || |||||  | |||||||| |   ||| |||||| |    
12234665 tttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagttta 12234764  T
152 ccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaa 251  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||  ||||||| |||||| ||||| |||||||||||||||||    
12234765 ccattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggctttaacttggaagacattacctttgattgttaggagagacacatcaaa 12234864  T
252 agtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcatta 351  Q
    ||| ||||| || |||||||| ||||||||||| |  ||  || ||||   |  |||||| ||||| |||||||||| ||| |||||  |||| || ||     
12234865 agtgccaccgccgagatcaaaaacaaaaatatttcgttctccaacacaatcagttctcttgtcaagaccatatgcaacagcggctgccatgggttcgttc 12234964  T
352 attattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac 434  Q
    ||||  ||||||||||| || ||||||||| |||||||||| ||||| |||||||| || | |||||||||||||||||||||    
12234965 attaccctcataacattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcac 12235047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 453
Target Start/End: Original strand, 7542151 - 7542599
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||||||||||||||| |||||  ||||    |||||| ||||  || ||||||||||| || ||||||||||||||||  |||| |||||  |||     
7542151 aataaagaatctacctcaatagtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacctcctcaaggcttttggattcc 7542250  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     |||||||||||| || |||||  | |||||||| | ||||||||||||| ||||||| ||||||||||| ||||| || ||||||||||| |||| |||    
7542251 cactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgccattctattatcaaagtcttctccaccaaggtgagtgttgccagcagt 7542350  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    ||| |||||||  |||   |  || ||||| || || | ||||||||||||||| ||||| ||||||||||| ||||||||||| | |||  ||||| |     
7542351 ggccttaacttggaagttgttgcccttaatcgttagtaaagacacatcaaaagtgccaccgccaagatcaaaaacaaaaatatttcgctctccatcataa 7542450  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      |  |||||| ||||| |||||||||| |||||| ||||| || ||||| |||   ||||||||||| || |||||||||||||| ||||| |||||||    
7542451 tcagttctcttgtcaaggccatatgcaacagctgcggcagtaggttcattcattgccctcataacattgaggccagcaatggcacccgcatctatagtgg 7542550  T
401 cttttcgctgtgcatcattgaaataagcaggcacatacagtgacaactgcatt 453  Q
    ||||||| || | |||||| |||||||||||    |||||| |||||||||||    
7542551 cttttcgttgagaatcattaaaataagcagg----tacagtaacaactgcatt 7542599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 14703333 - 14703766
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||| ||||||||||| ||||| |||||    |||||| ||||| || |||||||||||||| || |||||||| |||| ||||| |||||  ||      
14703333 aataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttggatttc 14703432  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     |||||||||||   | || ||  | |||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
14703433 cactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagtcctctcccccgaggtgagtgtttccagcagt 14703532  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
     || |||| ||  |||||    || |||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |  ||  || || |     
14703533 agccttaatttggaagacggtgcccttaattgttaggagagacacgtcaaaagtaccaccaccaagatcaaagacaaatatattacgttctccaccataa 14703632  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
      |  |||||| ||||| ||||||||||||||||| || || || ||||| ||||  ||||||||||| || || |||||  ||||||||||||||||||    
14703633 tcagttctcttgtcaaggccatatgcaatagctgcagctgtaggttcattcattaccctcataacattgaggccggcaataacaccagcatccatagtgg 14703732  T
401 cttttcgctgtgcatcattgaaataagcaggcac 434  Q
    ||||||  || | |||| | ||||||||||||||    
14703733 cttttctttgagaatcactaaaataagcaggcac 14703766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 127 - 431
Target Start/End: Complemental strand, 12245523 - 12245219
Alignment:
127 ttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctt 226  Q
    |||||||||| | |||||||||| |||||||| |||||||| |||||||| || |||||||||||||||| |||||| |||||||  ||||  | | | |    
12245523 ttgaactcctgtgcaaagtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaacttggaagatgttatcct 12245424  T
227 taattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgc 326  Q
    |||| || |||| ||| || |||||||| ||||||||||||||||| |||||||| || || ||  || ||||   | ||||||| ||||| ||||||||    
12245423 taatagttaggatagaaacgtcaaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaatcagctctcttttcaaggccatatgc 12245324  T
327 aatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataa 426  Q
    || |||||| |||||||| ||||| ||||  ||||||||||| ||||||||||| |  |||||||| || || ||||||||||| | |||| | ||||||    
12245323 aacagctgcagcagtgggttcattcattaccctcataacattgagaccagcaattgagccagcatctatcgttgcttttcgctgagaatcactaaaataa 12245224  T
427 gcagg 431  Q
    |||||    
12245223 gcagg 12245219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 127 - 286
Target Start/End: Complemental strand, 12258698 - 12258539
Alignment:
127 ttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctt 226  Q
    |||||||| |||||||||||  |||||||||| ||||||||||||||||| || ||||| ||||||||||  || || ||||||| |||||||| | | |    
12258698 ttgaactcttctacaaagtaactcaccattctattatcaaagtcctctcctccaaggtgcgtgtttccagctgtagccttaacttgaaagacattatcct 12258599  T
227 taattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcc 286  Q
    |||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||    
12258598 taatggttagtagagacacatcaaaagtgccaccaccaagatcaaagacaaaaatattcc 12258539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 43625337 - 43625770
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||||||||||||||| |||| |||   | || ||||| |||||||| ||| | |||||||| || ||||||||||| | || || | ||| |||      
43625337 aataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttcttatggctcttgagtttc 43625436  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     | |||| |||||||| |||||||| |  || || ||| ||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| |||    
43625437 caataatatccacattgttcttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagt 43625536  T
201 ggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacac 300  Q
    |||||||||    ||||| |   | |||||||| || | ||||||||||||||| ||||||||||| |||||||  |||||||| |  ||  || ||||     
43625537 ggctttaacacggaagaccttgtccttaattgtaagtatagacacatcaaaagtaccaccaccaaggtcaaagatgaaaatatttcgttctccaacacaa 43625636  T
301 ctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtgg 400  Q
     ||  |||||| | ||| || ||||| | ||| || || || || ||||| |||| ||  | ||||||||| ||  ||||| ||||| |||| || ||||    
43625637 ttaattctcttgttaaggccgtatgctagagcagcagctgttggttcattgattactcgtaaaacattaaggccgacaatgacaccaacatctatggtgg 43625736  T
401 cttttcgctgtgcatcattgaaataagcaggcac 434  Q
    |||||||||| | ||||||||| |||||||||||    
43625737 cttttcgctgagaatcattgaagtaagcaggcac 43625770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 160 - 428
Target Start/End: Original strand, 11999478 - 11999746
Alignment:
160 ttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccac 259  Q
    |||||||| |||||||| |||| ||||||||||||||  ||||| |||||||  |||||||   | |||||||| || | ||||| ||||||||| ||||    
11999478 ttatcaaaatcctctcctccgaagtgagtgtttccagctgtggccttaacttggaagacattgtccttaattgttagtatagacaaatcaaaagtgccac 11999577  T
260 caccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgggctcattaattattct 359  Q
    | |||||||||||||| ||||| || || ||  || ||||   | ||||||| ||||| |||||||||| || ||| |||||||| ||||| ||||  ||    
11999578 cgccaagatcaaagactaaaatgtttctttctccaacacaatcagctctcttgtcaaggccatatgcaacagttgcagcagtgggttcattcattaccct 11999677  T
360 cataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagc 428  Q
     |||||||| |  |||||||| ||||| ||||| |||||||||||||| || | |||| | ||||||||    
11999678 tataacattgatgccagcaattgcaccggcatctatagtggcttttcgttgagaatcactaaaataagc 11999746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 17716618 - 17716546
Alignment:
319 ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcat 391  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||    
17716618 ccataagcaatggctgcagcagtgggctcattaataattctcatgaaattaagaccagcaatagcaccagcat 17716546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 28219843 - 28220038
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    |||||||||||||||||||  |||| |||||  || ||||| |||||||| ||||| |||| ||| || ||||||||||||| ||||| | ||| |||      
28219843 aataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagtttc 28219942  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccag 196  Q
     | |||||||||| || |||||||| || ||||||||| | |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
28219943 cagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccag 28220038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 28220193 - 28220310
Alignment:
318 tccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatca 417  Q
    ||||||||||||||| || |||||||| ||||| | ||| || | |||||| ||||||||||||| ||| ||||| || |||||||| |||||   ||||    
28220193 tccatatgcaatagcagcagcagtgggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggctttccgctgataatca 28220292  T
418 ttgaaataagcaggcaca 435  Q
    ||||||||||||||||||    
28220293 ttgaaataagcaggcaca 28220310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 28220110 - 28220159
Alignment:
235 aggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt 284  Q
    ||||||||||||||||||||||||||||| || |||||||  ||||||||    
28220110 aggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatt 28220159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 42555961 - 42555893
Alignment:
135 ctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggc 203  Q
    |||| ||||||| |||||||| ||  |||| ||||| |||||| ||||||||||||| ||||| |||||    
42555961 ctctgcaaagtatttcaccatcctactatccaagtcgtctccctcgaggtgagtgttaccagaggtggc 42555893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 43744741 - 43744943
Alignment:
1 aataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttct 100  Q
    ||||||||||||||||||| |||||||||||  || ||||| | |||||| ||||| || ||||| || ||||||||||||| ||| | | ||| |||      
43744741 aataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttgggtttc 43744840  T
101 tactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagt 200  Q
     | |||||||||| || |||||||| || ||||||||| | |||||||||||||| || |||||||| |||||||| |||||||||||||||||||| ||    
43744841 cagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcctccgaggtgagtgtttccagaggt 43744940  T
201 ggc 203  Q
    |||    
43744941 ggc 43744943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 226 - 435
Target Start/End: Original strand, 43744999 - 43745206
Alignment:
226 ttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcct--ctcagcatcacacctacctctcttctcaagtccata 323  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||  |||||||| ||  ||| ||| || |  ||  |||||| || || |||||    
43744999 ttaattgtaaggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttcttcctc-gca-cagagttagttctcttttccagaccata 43745096  T
324 tgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaa 423  Q
    |||||||||||| |||||||| ||||| |||||  ||||||||| ||| ||||||||||||||||||||  |||||||||| |||||   ||||||||||    
43745097 tgcaatagctgcagcagtgggttcattgattatcttcataacatcaagcccagcaatggcaccagcatc--tagtggctttccgctgataatcattgaaa 43745194  T
424 taagcaggcaca 435  Q
    ||||| ||||||    
43745195 taagccggcaca 43745206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 434
Target Start/End: Original strand, 12528471 - 12528862
Alignment:
43 agtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaa 142  Q
    |||||||| || ||| ||||||||  ||||||||| |||| || || ||||| ||||  | ||||||| || || |||||| | || ||||| |  ||||    
12528471 agtgtccttttcgccttctcgcagttagttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctcttaaactctttcacaa 12528570  T
143 agtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagaga 242  Q
    |||  ||||||||||  ||||||||||||||||| || |||||||||| ||| | |||||| || ||||| ||||||| |   || | ||| || |||||    
12528571 agtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttcgaagacattattctttactgtaagaagaga 12528670  T
243 cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtg 342  Q
    |||||||||||| ||||| ||||| ||||| | ||||||  | |||||  ||  |||  || ||||||| | ||  |||||||||| ||| ||||||||     
12528671 cacatcaaaagttccaccgccaaggtcaaaaataaaaatccttctctcttcaagacaattagctctcttttgaatgccatatgcaagagcagctgcagtt 12528770  T
343 ggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcaggcac 434  Q
    || || || ||||| |  || ||||| || ||||||||| ||||||||||| | ||||||  |||||| | |||||||||||| || |||||    
12528771 ggttcgttgattatccgtattacattgaggccagcaatgacaccagcatccttggtggctcgtcgctgcgaatcattgaaatacgctggcac 12528862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 144 - 426
Target Start/End: Original strand, 28910650 - 28910932
Alignment:
144 gtagttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagac 243  Q
    |||||||||||| || ||||||| ||||||  |||||||||||||||||||||  ||||| |||||||  ||||| | | | | |||||| ||||||||     
28910650 gtagttcaccatcctattatcaatgtcctcgaccccgaggtgagtgtttccagcggtggccttaacttggaagaccttatcctgaattgtaaggagagaa 28910749  T
244 acatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgcagtgg 343  Q
    |||||||||||||||| ||| || || ||||  ||| |||| |  ||  || |||||  | ||||||| || || ||||||| ||||||| | ||||||     
28910750 acatcaaaagtcccactacccaggtcgaagatgaaagtatttcgttctccagcacactcagctctcttgtcgaggccatatgaaatagctacagcagtga 28910849  T
344 gctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataa 426  Q
    ||||||| ||||| | |||||||||||| |   |||||||||||||||| || |||||||| | ||  | |||||||||||||    
28910850 gctcattgattatccgcataacattaagcctgacaatggcaccagcatctatggtggctttcctctaagaatcattgaaataa 28910932  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 11133065 - 11133125
Alignment:
147 gttcaccattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggcttta 207  Q
    |||||||||| ||||||||||||| | ||||||||||||||| | ||||| ||||||||||    
11133065 gttcaccattgtgttatcaaagtcttgtcccccgaggtgagtatctccagcagtggcttta 11133125  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 11276197 - 11276270
Alignment:
319 ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc 392  Q
    ||||||||||| || |||||||| |||||||| ||||||| |||||| || || |||||||| ||||| |||||    
11276197 ccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacccgcatc 11276270  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 11156507 - 11156574
Alignment:
313 tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaat 380  Q
    ||||| ||||||||||| || |||||||  |||||||| ||||||| ||||||||| || ||||||||    
11156507 tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaat 11156574  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 392
Target Start/End: Original strand, 11170807 - 11170886
Alignment:
313 tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc 392  Q
    ||||| ||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| |||||    
11170807 tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatc 11170886  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 11196960 - 11197027
Alignment:
313 tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaat 380  Q
    ||||| ||||||||||| || |||||||  |||||||| ||||||| ||||||||| || ||||||||    
11196960 tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaat 11197027  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 392
Target Start/End: Original strand, 11200125 - 11200204
Alignment:
313 tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc 392  Q
    ||||| ||||||||||| || |||||||  |||||||| ||||||| || |||||| || |||||||| ||||| |||||    
11200125 tcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacccgcatc 11200204  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 11209635 - 11209708
Alignment:
319 ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc 392  Q
    ||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| |||||    
11209635 ccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatc 11209708  T

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Target: scaffold1207 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 1128 - 1201
Alignment:
319 ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc 392  Q
    ||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||| ||||| |||||    
1128 ccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacctgcatc 1201  T

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