View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10112_low_4 (Length: 440)
Name: NF10112_low_4
Description: NF10112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10112_low_4 |
 |  |
|
[»] scaffold0707 (1 HSPs) |
 |  |  |
|
[»] scaffold0308 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 11 - 323
Target Start/End: Original strand, 24793356 - 24793668
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
24793356 |
cataggacttgaccaccacatctgagttccaaaa-caaaagtggcatttttagccttcaaccacgctaaagataacaacttaattttatcaagtaatcta |
24793454 |
T |
 |
Q |
110 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctag |
209 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
24793455 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataactgaagaaaagacctcctaa |
24793554 |
T |
 |
Q |
210 |
ctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccca |
309 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| |
|
|
T |
24793555 |
ctttgccgaaacctgaaaaactagtgaactgcacaaagtgatgagaaatagtgttggagtcaaccccaacacaacctatccagtgccgcacctgctccca |
24793654 |
T |
 |
Q |
310 |
taaaactgcaaaag |
323 |
Q |
|
|
|||||| ||||||| |
|
|
T |
24793655 |
taaaaccgcaaaag |
24793668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 12 - 323
Target Start/End: Complemental strand, 11394881 - 11394569
Alignment:
Q |
12 |
ataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctag |
110 |
Q |
|
|
||||||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
11394881 |
ataggacttgaccaccacatctgagttccaaaaataaaagtgatatttttagctttcagccacactaaagataacaacttaattttatcaagtaatctag |
11394782 |
T |
 |
Q |
111 |
gaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagc |
210 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |
|
|
T |
11394781 |
gaacctcggtaatcacatttttaaacaaacgaatattacgcccattccaaatcacccaagatgtcagaagccatattaactgtagaaaagacctcctagc |
11394682 |
T |
 |
Q |
211 |
tttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccat |
310 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| |||| || ||||||||||||| |
|
|
T |
11394681 |
tttgccgaaacctgacaaactagtgaactgcacaaagtgatgagaaatagtgttgtagacaaccccaacacaacctatccagtgccgcacctgctcccat |
11394582 |
T |
 |
Q |
311 |
aaaactgcaaaag |
323 |
Q |
|
|
||||| ||||||| |
|
|
T |
11394581 |
aaaaccgcaaaag |
11394569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 43254251 - 43253949
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||||| |||||||||||||| ||||||||| ||||||| |
|
|
T |
43254251 |
accaccacatctgagttccaaaaacaaaagtggcatttttagctttcagccacactaacgataacaatttaattttatcaagcaatctaggagcctcggt |
43254152 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| | ||||||||| ||||||||||||||| |||| |||||| | |||| ||||||| || | |||||||||| | ||| |
|
|
T |
43254151 |
tacaacatttttaaacaaacgattgttacgctcactccaaatcacccaagtagtcaaaagccagattaactgaagaaacgatcgcctagctttggcaaaa |
43254052 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaa-ccccaacacaacctattcagtaccacacctgctcccataaaactgca |
319 |
Q |
|
|
|||||||||| |||||||||||| || |||| ||||||| |||||||||||| |||| ||||||||||| ||| || || |||||||||||| | ||| |
|
|
T |
43254051 |
cctgacaaacaagtgaactgcacgaagtgattagaaataatgttggagtcaaccccccacacaacctatccagagccgcagttgctcccataaatccgca |
43253952 |
T |
 |
Q |
320 |
aaa |
322 |
Q |
|
|
||| |
|
|
T |
43253951 |
aaa |
43253949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 424
Target Start/End: Original strand, 4676129 - 4676157
Alignment:
Q |
396 |
ttattaagaataatgatatagttagttag |
424 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
4676129 |
ttattaagaataatgatatagttagttag |
4676157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 43613559 - 43613523
Alignment:
Q |
51 |
tggcatttttagccttcagccacgctaaagataacaa |
87 |
Q |
|
|
||||||||||||||||||||||| || |||||||||| |
|
|
T |
43613559 |
tggcatttttagccttcagccaccctgaagataacaa |
43613523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 11 - 315
Target Start/End: Complemental strand, 19514001 - 19513696
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
T |
19514001 |
cataggacttgaccaccacatctgagttccaaaaacaaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaaccta |
19513902 |
T |
 |
Q |
110 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctag |
209 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
T |
19513901 |
ggaacctcggtaatcacatttttaaacaaacgaatatttcgctcattccaaatcacccaagatgtcagaagccatagtaactgaagaaaagacctcctag |
19513802 |
T |
 |
Q |
210 |
ctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccca |
309 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| |
|
|
T |
19513801 |
ctttgccgaaacctgacaagctagtgaactgcacaaagtgatgagaaatagtgttggagtcaaccccaacacaacctatccagtgccgcacctgctccca |
19513702 |
T |
 |
Q |
310 |
taaaac |
315 |
Q |
|
|
|||||| |
|
|
T |
19513701 |
taaaac |
19513696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 21 - 293
Target Start/End: Original strand, 8571545 - 8571817
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
8571545 |
accaccacatctgagttccaaaaacaaaagtggcatttttagctttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
8571644 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||| | ||||||||||||||||||||||||||| |
|
|
T |
8571645 |
aatcacatttttaaacaaacgattattacgctcattccaaatcatccaagaagtcagaagccatattaactgtagaaaagacctcctagctttgccgaaa |
8571744 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagt |
293 |
Q |
|
|
||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
8571745 |
cctgacatactagtgaactgcacaaagtgatgagaaatagtgttggagtcaaccccgacacaacctattcagt |
8571817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 11 - 323
Target Start/End: Original strand, 4399481 - 4399794
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
4399481 |
cataggacttgaccaccacatctgagttccaaaaacaaaagtggcttttttagctttcagccgcgctaaagataacaacttaattttatcaagtaatcta |
4399580 |
T |
 |
Q |
110 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctag |
209 |
Q |
|
|
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| || |||||||| |||| | |||||||||||||||| |
|
|
T |
4399581 |
ggaacctcggtaatcacatttttaaacaaacgattgttacgctcattccaaatcacccaagatgacaaaagccatattaactgtagaaaagacctcctag |
4399680 |
T |
 |
Q |
210 |
ctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccca |
309 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| || | || |||||||||||| |
|
|
T |
4399681 |
ctttgccgaaacctgacatcctagtgaactgcacaaagtgatgagaaataatgttggagtcaacccccacacaacctatccattgccgcacctgctccca |
4399780 |
T |
 |
Q |
310 |
taaaactgcaaaag |
323 |
Q |
|
|
||| || ||||||| |
|
|
T |
4399781 |
taataccgcaaaag |
4399794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 31 - 288
Target Start/End: Original strand, 17737781 - 17738038
Alignment:
Q |
31 |
ctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggtaatcacattt |
130 |
Q |
|
|
||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
17737781 |
ctgagttccaaaaacaaaagtggcatttttagctttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggtaatcacattt |
17737880 |
T |
 |
Q |
131 |
ttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaacctgacaaac |
230 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||| || |
|
|
T |
17737881 |
ttaaacaaacgattattacgctcattccaaatcacccaagatgtcagaagccatattaactgtagaaaagacctcctagctttgtcgaaacctgacatac |
17737980 |
T |
 |
Q |
231 |
tagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctat |
288 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
17737981 |
tagtgaactgcacaaagtgatgagaaatagtgttggagtcaaccccgacacaacctat |
17738038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 21 - 288
Target Start/End: Original strand, 13916889 - 13917155
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||| ||| ||| |
|
|
T |
13916889 |
accaccacatatgagttccaaaaacaaaagtggcatttttagctttcagtcacgctgacaataacaacttaattttatcaagcaatctaggagccttggt |
13916988 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| | ||||||||||||| || | |||||||||||| ||| ||||||||| |||| |||||| | |||| |||||||||| | |||||||||||| ||| |
|
|
T |
13916989 |
tacaatatttttaaacaaatgattgttacgctcattcaaaaccacccaagaagtcaaaagccagattaactgaagaaaaga-cgcctagctttgccaaaa |
13917087 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctat |
288 |
Q |
|
|
||||||| || |||||||||||| || |||| ||||||| ||||||||| ||||| ||||||||||| |
|
|
T |
13917088 |
cctgacatacaagtgaactgcacgaagtgattagaaataatgttggagttgacccccacacaacctat |
13917155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 3199663 - 3199516
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacg------------------ctaaagataacaactta |
91 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
T |
3199663 |
cataggacttgaccaccacatctgagttccaaaaacaaaagtggcatttttagctttcagccactatcaacaaacaaaccagactaaagataacaactta |
3199564 |
T |
 |
Q |
92 |
attttatcaagtaatctaggaacctcggtaatcacatttttaaacaaa |
139 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
3199563 |
attttatcaagtaatctaggaacctcggtaatcacatttttaaacaaa |
3199516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 9578318 - 9578247
Alignment:
Q |
325 |
aggagaatgccaatgaattttttggactcctagttgaggaaaccaaaagcaggagttttgcatggaattctt |
396 |
Q |
|
|
||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| |
|
|
T |
9578318 |
aggagaatgttaatgaattttttggactcctaatcgaggaaaccaaaagcagaagttttgcatggaattctt |
9578247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 6264723 - 6264639
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaa |
105 |
Q |
|
|
|||||||| ||||||||||||||| ||||| || |||||||| |||| ||| ||||||| |||||||||| |||| |||||| |
|
|
T |
6264723 |
accaccactgctgagttccaaaaacaaaagtagcttttttagctttcaaccaacctaaagacaacaacttaaccttataaagtaa |
6264639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 34480571 - 34480711
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||| |||||| |||||||| || || || |||||||| |||||||| ||||||| | |||||||| ||||||||||| | ||| | ||| |
|
|
T |
34480571 |
accaccactgctgagtgccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaacttaaccttatcaagtaaacaagggatgggggt |
34480670 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaa |
161 |
Q |
|
|
|| ||||| ||||||| |||| ||||||| |||||||||| |
|
|
T |
34480671 |
aaccacatgattaaacagacgattattacgttcattccaaa |
34480711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 15005787 - 15005829
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagc |
63 |
Q |
|
|
|||||||||| |||||||||||||| ||||| ||||||||||| |
|
|
T |
15005787 |
accaccacatatgagttccaaaaacaaaagtagcatttttagc |
15005829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 15500171 - 15500093
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
|||||||| ||||||||||||||| ||||| || |||||||| || ||||| ||||||| || |||||||| ||||| |
|
|
T |
15500171 |
accaccactgctgagttccaaaaacaaaagtagcttttttagctttaagccaacctaaagacaataacttaatcttatc |
15500093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 35123241 - 35123153
Alignment:
Q |
12 |
ataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
||||||||| |||||||||||| ||| ||| |||| || |||| |||| ||| ||||||||| |||| |||||||| ||||| ||||| |
|
|
T |
35123241 |
ataggacttgaccaccacatctaagtaccataaacaaacatggctttttcagctttcagccaccctaatgataacaatttaatcttatc |
35123153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 323
Target Start/End: Original strand, 19728091 - 19728404
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
19728091 |
cataggacttgaccaccacatctgagttccaaaaacaaaagtggcatttttagctttcagccacgctaaagataacaacttaattttatcaagtaatcta |
19728190 |
T |
 |
Q |
110 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctag |
209 |
Q |
|
|
|||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
T |
19728191 |
ggaacctcagtaatcacatttttaaacaaacgaaaattacgctcattccaaatcacccaagatgtcagaagccatattaactgaagaaaagacctcctag |
19728290 |
T |
 |
Q |
210 |
ctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccca |
309 |
Q |
|
|
||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| || | || |||||||| ||| |
|
|
T |
19728291 |
ctttgccaaaacctgacaaaccagtgaactgcacaaagtgatgataaatagtgttggagtcaaccccagcacaacctatccattgccgcacctgcttcca |
19728390 |
T |
 |
Q |
310 |
taaaactgcaaaag |
323 |
Q |
|
|
||||| ||||||| |
|
|
T |
19728391 |
caaaaccgcaaaag |
19728404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 24 - 185
Target Start/End: Complemental strand, 43022021 - 43021860
Alignment:
Q |
24 |
accacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggtaat |
123 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
43022021 |
accacatctgagttccaaaaacaaaagtggcatttttaaccttcagccacgctaaagataacaacttaattttatcaagtaacctaggaacctcggtaat |
43021922 |
T |
 |
Q |
124 |
cacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccata |
185 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
T |
43021921 |
cacatttttaaacaaacgaatatttcgctcattccaaatcacccaagatgtcagaagccata |
43021860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 31026024 - 31025726
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||||||||||| |||||||| ||||||||| ||||| |
|
|
T |
31026024 |
accaccacatctgagttccaaaaacaaaagtggcatttttagctttcagccacactaacgataacaacttaatattatcaagcaatctaggagcctcg-- |
31025927 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| | ||||||||| ||||||||||||||| || | |||||| | |||| ||||||| || | |||||||||| | ||| |
|
|
T |
31025926 |
-acaacatttttaaacaaacgattgttacgctcactccaaatcacccaagtagtgaaaagccagattaactgaagaaacgatcgcctagctttggcaaaa |
31025828 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
||| |||||| |||||||||||| || |||| ||||||| |||||||||||||||| ||||||||||| ||| || || |||||||||||| | |||| |
|
|
T |
31025827 |
cctaacaaacaagtgaactgcacgaagtgattagaaataatgttggagtcaacccccacacaacctatccagagccgcagttgctcccataaatccgcaa |
31025728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 13554703 - 13554402
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||||||||| || |||||| |||| ||||||||||||||||||||||| || |||||| ||||||| |
|
|
T |
13554703 |
accaccacatatgagttccaaaaacaaaagtggcatttttagctttaagccacactaacgataacaacttaattttatcaagcaaactaggagcctcggt |
13554604 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| | ||||||||| |||| |||||||| | |||| |||||| | |||| ||||||| || | |||||||||| | ||| |
|
|
T |
13554603 |
tacaacatttttaaacaaacgattgttacgctcactccagatcacccacgtagtcaaaagccagattaactgaagaaacgatcgcctagctttggcaaaa |
13554504 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
||||| |||| |||||||||||| ||||||| ||||||| |||||||||| ||||| ||||||||||| ||| || || |||||||||||| | |||| |
|
|
T |
13554503 |
cctgataaacaagtgaactgcacgaaatgattagaaataatgttggagtcgacccccacacaacctatccagagccgcaattgctcccataaatccgcaa |
13554404 |
T |
 |
Q |
321 |
aa |
322 |
Q |
|
|
|| |
|
|
T |
13554403 |
aa |
13554402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 21 - 312
Target Start/End: Complemental strand, 47106135 - 47105844
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||||||||| || || ||| |||| |||||||| || ||||||||||| ||||||||| ||||||| |
|
|
T |
47106135 |
accaccacatatgagttccaaaaacaaaagtggcatttttagctttaagtcacactaacgataacaatttgattttatcaagcaatctaggagcctcggt |
47106036 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||| | |||| ||||||| || | |||||||||| | ||| |
|
|
T |
47106035 |
tacaacatttttaaacaaacgattattacgctcactccaaatcacccaagtagtcaaaagccagattaactgaagaaacgatcgcctagctttggcaaaa |
47105936 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataa |
312 |
Q |
|
|
||||| | || |||||||||||| || |||| ||||||| |||||||||| ||||| ||||| ||||| ||| || || ||||||||||| |
|
|
T |
47105935 |
cctgatagacaagtgaactgcacgaagtgattagaaataatgttggagtcgacccccacacagcctatccagagccgcaattgctcccataa |
47105844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 42565444 - 42565660
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||||||||| || |||||| |||| ||||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
42565444 |
accaccacatatgagttccaaaaacaaaagtggcatttttagctttaagccacactaacgataacaacttaattttatcaagcaatctaggagcctcggt |
42565543 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||| | |||| ||||||| | | |||| ||||| | ||| |
|
|
T |
42565544 |
tacaacatttttaaacaaacgattattacgctcactccaaatcacccaagtagtcaaaagccagattaactgaagaaactatcgcctaactttggcaaaa |
42565643 |
T |
 |
Q |
221 |
cctgacaaactagtgaa |
237 |
Q |
|
|
||||| |||| |||||| |
|
|
T |
42565644 |
cctgataaacaagtgaa |
42565660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 43021858 - 43021801
Alignment:
Q |
258 |
tagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaac |
315 |
Q |
|
|
||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| |
|
|
T |
43021858 |
tagtgttggagtcaaccccaacacaacctatccagtgccgcacctgctcccataaaac |
43021801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 5021107 - 5021019
Alignment:
Q |
12 |
ataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
||||||||| |||||||||||||||| ||| |||| || |||| |||||||| ||||||||| |||| |||||||| ||||| ||||| |
|
|
T |
5021107 |
ataggacttgaccaccacatctgagtaccataaacaaacatggcttttttagctttcagccaccctaatgataacaatttaatcttatc |
5021019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 26078920 - 26078840
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaa |
101 |
Q |
|
|
|||||||| ||||||| |||||||| || |||| |||||||| |||||||||||||| |||||| ||||| ||||||| |
|
|
T |
26078920 |
accaccacctctgagtaccaaaaacaaatgtggtttttttagctttcagccacgctaacaataacagtttaatcttatcaa |
26078840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 26102707 - 26102627
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaa |
101 |
Q |
|
|
|||||||| ||||||| |||||||| || |||| |||||||| |||||||||||||| |||||| ||||| ||||||| |
|
|
T |
26102707 |
accaccacctctgagtaccaaaaacaaatgtggtttttttagctttcagccacgctaacaataacagtttaatcttatcaa |
26102627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 323
Target Start/End: Complemental strand, 42954029 - 42953717
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| |||||||||| |||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
42954029 |
cataggacttgaccaccacatttgagttccaaaaacaaaagtggcatttttatctttcagccacgctaaagataacaacttaattttatcaagtaatcta |
42953930 |
T |
 |
Q |
110 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctag |
209 |
Q |
|
|
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| | | |||||||||||||| |
|
|
T |
42953929 |
ggaacctcggtaatcacatttttaaacatacgattattacgctcattccaaatcacccaagatgtcagaagccatattaattgtaaaaaagacctcctag |
42953830 |
T |
 |
Q |
210 |
ctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccca |
309 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||| |
|
|
T |
42953829 |
ctttgccgaaacctgacatactagtgaactgcacaaagtgatgagaaatagtgttggagtcaaccccaacacaacctatccagt-ccgcacctgctccca |
42953731 |
T |
 |
Q |
310 |
taaaactgcaaaag |
323 |
Q |
|
|
|||||| ||||||| |
|
|
T |
42953730 |
taaaaccgcaaaag |
42953717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 12 - 322
Target Start/End: Complemental strand, 9993373 - 9993062
Alignment:
Q |
12 |
ataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctag |
110 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||| | ||||| |
|
|
T |
9993373 |
ataggacttgaccaccacatctgagttccaaaaacaaaagtgacatttttagttttcagccactataacgataacaacttaattttatcaagcagtctag |
9993274 |
T |
 |
Q |
111 |
gaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagc |
210 |
Q |
|
|
|| ||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||| | | |||| ||||||||||||||||||| |
|
|
T |
9993273 |
gagcctcggttaccacatttttaaacaaacgatgattacgctcattccaaaccacccaagatgacaaaagctagattaactgaagaaaagacctcctagc |
9993174 |
T |
 |
Q |
211 |
tttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccat |
310 |
Q |
|
|
|||||| |||||||||| || ||||||||||||||| |||| ||||||| ||||||||||||| || ||||||||||| ||| || ||| ||||||||| |
|
|
T |
9993173 |
tttgccaaaacctgacatacaagtgaactgcacaaagtgattagaaataatgttggagtcaactcccacacaacctatccagcgccgcacttgctcccat |
9993074 |
T |
 |
Q |
311 |
aaaactgcaaaa |
322 |
Q |
|
|
||||| |||||| |
|
|
T |
9993073 |
aaaaccgcaaaa |
9993062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 21 - 288
Target Start/End: Original strand, 10353563 - 10353830
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||| ||||| ||||| |||||||| | ||||||||| |||| ||| |||||||||||||||| || ||||||||| |||| || |
|
|
T |
10353563 |
accaccacatctgagttccgaaaacaaaagttacatttttaactttcagccacactaacgatgacaacttaattttatctagcaatctaggagcctcagt |
10353662 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||| | |||| ||||||| || | |||||||||| ||| |
|
|
T |
10353663 |
tacaacatttttaaacaaacgattattacgctcactccaaatcacccaagtagtcaaaagccagattaactgaagaaacgatcgcctagctttggtaaaa |
10353762 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctat |
288 |
Q |
|
|
|||||||||| |||||||||||| || |||| ||||||| |||||||||| ||||| ||||||||||| |
|
|
T |
10353763 |
cctgacaaacaagtgaactgcacgaagtgattagaaatactgttggagtcgacccccacacaacctat |
10353830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 21 - 183
Target Start/End: Original strand, 37615184 - 37615346
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||| | ||||||| | |||| ||||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
37615184 |
accaccacatctgagttccaaaaacaaaagtggcatttttaactttcagccgcactaacgataacaacttaattttatcaagcaatctaggagcctcggt |
37615283 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagcca |
183 |
Q |
|
|
| |||||||||||||||||| | ||||||||| ||||||||| ||||| |||| |||||| |
|
|
T |
37615284 |
tacaacatttttaaacaaacgattgttacgctcactccaaatcatccaagtagtcaaaagcca |
37615346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 4525163 - 4525056
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| |||||||| ||| ||| ||||||| |||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||||| |||||| |
|
|
T |
4525163 |
cataggacttgaccaccacgtcttagtatcaaaaacaaaagtggcttttttagctttcagtcacgctaaagataacaatttaatcttatcaagcaatcta |
4525064 |
T |
 |
Q |
110 |
ggaacctc |
117 |
Q |
|
|
|| ||||| |
|
|
T |
4525063 |
gggacctc |
4525056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 20669090 - 20669179
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
|||||||||| |||||||||||||||| ||| |||| || |||| ||||||||||||| |||| |||| |||||||| ||||| ||||| |
|
|
T |
20669090 |
cataggacttgaccaccacatctgagtaccataaacaaacatggcttttttagccttcatccaccctaatgataacaatttaatcttatc |
20669179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 10426409 - 10426345
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacg |
74 |
Q |
|
|
|||||||||| |||||||||||||||||| ||||| |||||| |||||||||| |||| ||||| |
|
|
T |
10426409 |
cataggacttgaccaccacatctgagttcaaaaaataaaagtgacatttttagctttcacccacg |
10426345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 55298238 - 55298322
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaa |
105 |
Q |
|
|
|||||||| |||||| |||||||| || || || |||||||| |||| ||| ||| ||| ||||||||||| ||||||||||| |
|
|
T |
55298238 |
accaccactgctgagtcccaaaaacaaaggtagcttttttagctttcaaccaacctagagacaacaacttaatcttatcaagtaa |
55298322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 11 - 315
Target Start/End: Complemental strand, 14868321 - 14868016
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
T |
14868321 |
cataggacttgaccaccacatctgagttccaaaaacaaaagtggcatttttagctttcagccaagctaaagataacaacataattttatcaagtaatcta |
14868222 |
T |
 |
Q |
110 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctag |
209 |
Q |
|
|
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||| |
|
|
T |
14868221 |
ggaacctcagtaaacacatttttaaacaaacgaatattacgctcattccaaatcacctaagatgccagaagccatattaactgaagaaaagacctcctag |
14868122 |
T |
 |
Q |
210 |
ctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccca |
309 |
Q |
|
|
||||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||||| |
|
|
T |
14868121 |
ctttgccaaaacctgccaaaccagtgaactgcacaaagtgatgagaaatagtgttggagtcaaccccagcacaacctaaccagtgccgcacctgctccca |
14868022 |
T |
 |
Q |
310 |
taaaac |
315 |
Q |
|
|
|||||| |
|
|
T |
14868021 |
taaaac |
14868016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 20198620 - 20198319
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
20198620 |
accaccacatctgagttccaaaaacaaaagtgatatttttagctttcagccacactaacgataacaacttaattttatcaagcaatctaggagcctcggt |
20198521 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| | ||||||||| ||||||||||| ||| |||| |||||| | || | ||||||| || | |||||||||| | ||| |
|
|
T |
20198520 |
tacaacatttttaaacaaacgattgttacgctcactccaaatcaccaaagtagtcaaaagccagattagctgaagaaacgatcgcctagctttggcaaaa |
20198421 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
|||||||||| |||||||||||| || |||| ||||||| |||||||||| ||||| ||||||||||| ||| || || |||||||||||| | |||| |
|
|
T |
20198420 |
cctgacaaacaagtgaactgcacgaagtgattagaaataatgttggagtcgacccccacacaacctatccagagccgcaattgctcccataaatccgcaa |
20198321 |
T |
 |
Q |
321 |
aa |
322 |
Q |
|
|
|| |
|
|
T |
20198320 |
aa |
20198319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 21 - 286
Target Start/End: Original strand, 10867315 - 10867580
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||| | |
|
|
T |
10867315 |
accaccacatctgagttccaaaaacaaaagtggtatttttagctttcagccacgctaacgataacaacttaattttatcaagcaatctaggagcctcaat |
10867414 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||| |||||| | |||||||||||||||| ||||||||| |||| || ||| | |||| || |||| |||| |||||||||||| ||| |
|
|
T |
10867415 |
tacaacatttttaagcaaacggttgttacgctcattccaaaccacccaagaagtcaaaatccagattaactgatgaaatgaccacctagctttgccaaaa |
10867514 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacct |
286 |
Q |
|
|
||||||| | |||||||||| |||| |||| ||||||| |||||||||| ||||| ||||||||| |
|
|
T |
10867515 |
cctgacatgcaagtgaactgctcaaagtgattagaaataatgttggagtcgacccccacacaacct |
10867580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 21 - 288
Target Start/End: Complemental strand, 53946425 - 53946158
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||| ||||| ||||| |||||||||| |||| |||| ||| ||||||||||||||||||||||| |||||| || ||| ||| |
|
|
T |
53946425 |
accaccacatctgagttcctaaaacaaaagttacatttttagctttcaaccacattaacgataacaacttaattttatcaagcaatctatgagcctaggt |
53946326 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||| | |||| ||| ||| || | |||||||||| | ||| |
|
|
T |
53946325 |
tacaacatttttaaacaaacgattattacgcttactccaaatcacccaagtagtcagaagccagattaactgaataaacgatcgcctagctttggcaaaa |
53946226 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctat |
288 |
Q |
|
|
|||||||||| |||||||||||| || |||| ||||||| |||||||||| ||||| ||||||||||| |
|
|
T |
53946225 |
cctgacaaacaagtgaactgcacgaagtgattagaaataatgttggagtcgacccccacacaacctat |
53946158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 27497377 - 27497498
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||||||| |||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
27497377 |
accaccacatctgaattccaaaaacaaaagtggcatttttagctttcagccacactaacgataacaacttaattttatcaagtaatctaggagtctcggt |
27497476 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacga |
142 |
Q |
|
|
| ||| |||||||||||||| |
|
|
T |
27497477 |
tacaacagttttaaacaaacga |
27497498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 27969050 - 27969166
Alignment:
Q |
55 |
atttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggtaatcacatttttaaacaaacgaatattacgctca |
154 |
Q |
|
|
||||||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||||| ||| || | ||||| |||||||||||| ||||||| || |
|
|
T |
27969050 |
atttttagctttcagccacactaacgataacaacttaattctatcaagcaatctaggaatctcagttacaacattattaaacaaacgattattacgttcg |
27969149 |
T |
 |
Q |
155 |
ttccaaatcacccaaga |
171 |
Q |
|
|
||||| ||||||||||| |
|
|
T |
27969150 |
ttccacatcacccaaga |
27969166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 9163654 - 9163576
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
|||||||||||||||| ||| |||| || ||| |||||||| ||||||||| ||||||||||||| ||||| ||||| |
|
|
T |
9163654 |
accaccacatctgagtaccataaacaaacatggtttttttagctttcagccaccctaaagataacaatttaatcttatc |
9163576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 19824330 - 19824242
Alignment:
Q |
12 |
ataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
||||||||| |||||||||||||||| || |||| || |||| |||||||| ||||||||| |||| |||| ||| ||||| ||||| |
|
|
T |
19824330 |
ataggacttgaccaccacatctgagtatcataaacaaacatggcttttttagctttcagccaccctaatgatatcaatttaatcttatc |
19824242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 25873637 - 25873553
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaa |
105 |
Q |
|
|
|||||||| ||||||||||||||| || | || |||||||| |||||||| ||||||| | |||||||| ||||||||||| |
|
|
T |
25873637 |
accaccactgctgagttccaaaaacaaagatagcttttttagctttcagccaacctaaagacatcaacttaaccttatcaagtaa |
25873553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 54440638 - 54440522
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||| | ||||| |||||| | || |||| |||||| | |||| |||| |||| |||||||| || || ||||||||||| |||||||| || || |
|
|
T |
54440638 |
accaccacctatgagtaccaaaatcaaatatggcttttttacctttcatccacactaacgataacaatttgatcttatcaagtaacctaggaacatcagt |
54440539 |
T |
 |
Q |
121 |
aatcacatttttaaaca |
137 |
Q |
|
|
|| ||||| ||||||| |
|
|
T |
54440538 |
aacaacattattaaaca |
54440522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 32244138 - 32243826
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatcta |
109 |
Q |
|
|
|||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
T |
32244138 |
cataggacttgaccaccacatctgagtttcaaaaacaaaagtggcatttttagctttcagccacgctaacgataacaacttaattttatcaagcaatcta |
32244039 |
T |
 |
Q |
110 |
ggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctag |
209 |
Q |
|
|
||| |||||| | ||||||||||||||||||| | |||||||||||||||| ||||||||||| || |||||| | ||| |||||||||||||||||| |
|
|
T |
32244038 |
ggagtctcggttaccacatttttaaacaaacgattgttacgctcattccaaaccacccaagatggcaaaagccaaattaattgaagaaaagacctcctag |
32243939 |
T |
 |
Q |
210 |
ctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccca |
309 |
Q |
|
|
||||||| |||||||||| || ||||||||||||||| |||| ||||||| |||||||||||||||| ||||||||||| ||| ||| |||||||||||| |
|
|
T |
32243938 |
ctttgccaaaacctgacatacaagtgaactgcacaaagtgattagaaataatgttggagtcaacccccacacaacctatccagcaccgcacctgctccca |
32243839 |
T |
 |
Q |
310 |
taaaactgcaaaa |
322 |
Q |
|
|
|||||| |||||| |
|
|
T |
32243838 |
taaaaccgcaaaa |
32243826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 9669531 - 9669230
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| |||||||||||||| |||||||| |||||||| || |||||| |||| ||||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
9669531 |
accaccacatatgagttccaaaaacaaaagtggcctttttagctttaagccacactaacgataacaacttaattttatcaagcaatctaggagcctcggt |
9669432 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||| | |||| ||||||| || | |||||||||| | ||| |
|
|
T |
9669431 |
tacaacatttttaaacaaacgattgttaggctcactccaaatcacccaagtagtcaaaagccagattaactgaagaaacgatcgcctagctttggcaaaa |
9669332 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
||||| |||| |||||| ||||| || |||||||||||| |||||||||| ||||| ||||||||||| ||| || || |||||||||||| | |||| |
|
|
T |
9669331 |
cctgataaacaagtgaattgcacgaagtgatgagaaataatgttggagtcgacccccacacaacctatccagagccgcaattgctcccataaatccgcaa |
9669232 |
T |
 |
Q |
321 |
aa |
322 |
Q |
|
|
|| |
|
|
T |
9669231 |
aa |
9669230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 21 - 288
Target Start/End: Complemental strand, 11234989 - 11234722
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||| |||| || |
|
|
T |
11234989 |
accaccacatctgagttccaaaaacaaaagttatatttttagctttcagccacactaacgataacaacttaattttatcaagcaatctaggagcctcagt |
11234890 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| ||||||| ||| ||||||||| ||||| || | |||||| | |||| ||||||| || | |||||||||| | ||| |
|
|
T |
11234889 |
tacaacatttttaaacaaacgattattacgatcactccaaatcaaccaagtagttaaaagccagattaactgaagaaacgatcgcctagctttggcaaaa |
11234790 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctat |
288 |
Q |
|
|
|||||||||| |||||||||||| || |||| ||||||| |||||||||| ||||| ||| ||||||| |
|
|
T |
11234789 |
cctgacaaacaagtgaactgcacgaagtgattagaaataatgttggagtcgacccccacaaaacctat |
11234722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 21 - 232
Target Start/End: Original strand, 3119582 - 3119793
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
T |
3119582 |
accaccacatctgagttccaaaaacaaaagtggcatttttagctttccgccacactaacgataacaacttaattttatcaagcaatctaggagtctcggt |
3119681 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| | ||||||||| ||||||||||||||| |||| || ||| | |||| ||||||| || | ||||| |||| | || |
|
|
T |
3119682 |
tacaacatttttaaacaaacgattgttacgctcactccaaatcacccaagtagtcaaaaaccagattaactgaagaaacgatcgcctagttttggcaaag |
3119781 |
T |
 |
Q |
221 |
cctgacaaacta |
232 |
Q |
|
|
|||||||||||| |
|
|
T |
3119782 |
cctgacaaacta |
3119793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 125 - 322
Target Start/End: Original strand, 10597436 - 10597633
Alignment:
Q |
125 |
acatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaacctg |
224 |
Q |
|
|
|||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||| |||| |||||| || | |||||||||| | ||||||| |
|
|
T |
10597436 |
acatttttaaacaaacgattattacgctcactccaaatcacccaagtagtcaaaagccatattaactcaagaaacgatcgcctagctttggcaaaacctg |
10597535 |
T |
 |
Q |
225 |
acaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaaaa |
322 |
Q |
|
|
|||||| |||||||||||| || |||| ||||||| |||||||||| ||||| ||||| ||||| ||| || || |||||||||||| | |||||| |
|
|
T |
10597536 |
acaaacaagtgaactgcacgaagtgattagaaataatgttggagtcgacccccacacagcctatccagagccgcaattgctcccataaatccgcaaaa |
10597633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 4040572 - 4040456
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||| | | ||| |||||||| || ||||| |||||||| |||||||||||||| ||||||| ||||| ||||||||||| |||||||| ||||| |
|
|
T |
4040572 |
accaccacctatcagtaccaaaaacaaatgtggcttttttagctttcagccacgctaacgataacagtttaatcttatcaagtaacctaggaacatcggt |
4040473 |
T |
 |
Q |
121 |
aatcacatttttaaaca |
137 |
Q |
|
|
| ||||| ||||||| |
|
|
T |
4040472 |
tacaacattattaaaca |
4040456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 37139306 - 37139373
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgcta |
77 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||| |
|
|
T |
37139306 |
cataggacttgaccaccacatctgagttccaaaaacaaaaatgacatttttagctttcagccacgcta |
37139373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 22052242 - 22052320
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
|||||||| ||||||||||||||| ||||| || |||||||| || ||||| ||||||| ||||||||||| ||||| |
|
|
T |
22052242 |
accaccactgctgagttccaaaaacaaaagtagcttttttagctttaagccaacctaaagacaacaacttaatcttatc |
22052320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 26681507 - 26681580
Alignment:
Q |
32 |
tgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaa |
105 |
Q |
|
|
|||||||||||||| || || || |||||||| |||||||| ||||||| |||||||||| ||||||||||| |
|
|
T |
26681507 |
tgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacaacaacttaaccttatcaagtaa |
26681580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 38443894 - 38443846
Alignment:
Q |
12 |
ataggactt-accaccacatctgagttccaaaaacgaaagtggcatttt |
59 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
38443894 |
ataggacttgaccaccacatctgagttccaaaaacaaaagtgacatttt |
38443846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 21614242 - 21614308
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaa |
87 |
Q |
|
|
||||||||||||| || ||||| || || |||||||||||||||||||||| ||| ||||||||| |
|
|
T |
21614242 |
accaccacatctgggtgccaaacacaaacacggcatttttagccttcagccaccctagagataacaa |
21614308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 424
Target Start/End: Complemental strand, 26608179 - 26608150
Alignment:
Q |
395 |
tttattaagaataatgatatagttagttag |
424 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
26608179 |
tttattaagaataatgatatagttagttag |
26608150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 31594169 - 31594253
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaa |
105 |
Q |
|
|
|||||||| ||||||||||||||| || || || |||||||| |||||||| ||||||| | ||| |||| ||||||||||| |
|
|
T |
31594169 |
accaccactgctgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaatttaaccttatcaagtaa |
31594253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0707 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0707
Description:
Target: scaffold0707; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 21 - 322
Target Start/End: Original strand, 1067 - 1368
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| ||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
1067 |
accaccacatttgagttccaaaaagaaaagtggtatttttagatttcagtcacgctaatgataacaacttaattttatcaagtaatctaggaacctcggt |
1166 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||||||||||||||||| || |||||| | |||| |||||||| ||||||||| |||||| ||| |
|
|
T |
1167 |
tatcacatttttaaacaaacgattgttacgctcattccaaatcacccaagatgacaaaagccagattaactgaagaaaaaacctcctagttttgccaaaa |
1266 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
||||| | || ||||||||||||||| |||| ||||||| ||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||| |||| |
|
|
T |
1267 |
cctgatatacaagtgaactgcacaaagtgattagaaataatgttgaagtcaacccccacacaacctatccagtgccacacctgctcccataaaaccgcaa |
1366 |
T |
 |
Q |
321 |
aa |
322 |
Q |
|
|
|| |
|
|
T |
1367 |
aa |
1368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 182; Significance: 3e-98; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 33572725 - 33572424
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| ||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
33572725 |
accaccacatttgagttccaaaaagaaaagtggtatttttagatttcagtcacgctaatgataacaacttaattttatcaagtaatctaggaacctcggt |
33572626 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||||||||||||||||| || |||||| | |||| |||||||| ||||||||| |||||| ||| |
|
|
T |
33572625 |
tatcacatttttaaacaaacgattgttacgctcattccaaatcacccaagatgacaaaagccagattaactgaagaaaaaacctcctagttttgccaaaa |
33572526 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
||||| | || ||||||||||||||| |||| ||||||| ||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||| |||| |
|
|
T |
33572525 |
cctgatatacaagtgaactgcacaaagtgattagaaataatgttgaagtcaacccccacacaacctatccagtgccacacctgctcccataaaaccgcaa |
33572426 |
T |
 |
Q |
321 |
aa |
322 |
Q |
|
|
|| |
|
|
T |
33572425 |
aa |
33572424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 21 - 285
Target Start/End: Original strand, 13085154 - 13085418
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
||||||||| ||| ||||||||||| ||||| |||||||||| ||||||||| |||| |||||||||||||||||||| || ||||||||| |||| || |
|
|
T |
13085154 |
accaccacaactgggttccaaaaacaaaagtcacatttttagctttcagccacactaacgataacaacttaattttatctagcaatctaggagcctcagt |
13085253 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||| | |||| ||||||| || | |||||||||| ||| |
|
|
T |
13085254 |
tacaacatttttaaacaaacgattattacgctcactccaaatcacccaagtggtcaaaagccagattaactgaagaaacgatcgcctagctttggtaaaa |
13085353 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacc |
285 |
Q |
|
|
|||||||||| |||||||||||| || | || ||||||| |||||||||| ||||| |||||||| |
|
|
T |
13085354 |
cctgacaaacaagtgaactgcacgaagtaattagaaatactgttggagtcgacccccacacaacc |
13085418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 33804385 - 33804474
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
|||||||||| |||||||||||||||| ||| |||| || ||||||||||||| || |||||| |||| |||||||| ||||| ||||| |
|
|
T |
33804385 |
cataggacttgaccaccacatctgagtaccataaacaaacatggcatttttagctttaagccaccctaatgataacaatttaatcttatc |
33804474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 6284329 - 6284399
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaactta |
91 |
Q |
|
|
||||||||||||||||| ||||||| ||||| ||||||||| |||| |||| |||| |||||||||||| |
|
|
T |
6284329 |
accaccacatctgagtttcaaaaacaaaagttatatttttagctttcaaccacactaacgataacaactta |
6284399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 8873340 - 8873267
Alignment:
Q |
32 |
tgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaa |
105 |
Q |
|
|
|||||||||||||| || || || |||||||| |||||||| ||||||| | |||||||| ||||||||||| |
|
|
T |
8873340 |
tgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaacttaaccttatcaagtaa |
8873267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 179; Significance: 2e-96; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 323
Target Start/End: Complemental strand, 41503437 - 41503123
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagcctt-cagccacgctaaagataacaacttaattttatcaagtaatct |
108 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||| |||||||| | |||||| || ||| |||||||||||||||| ||||||||||||||||||||| |
|
|
T |
41503437 |
cataggacttgaccaccacatctgagttccaaaaacaaaagtggcttgtttagcttttcagtcacgctaaagataacatcttaattttatcaagtaatct |
41503338 |
T |
 |
Q |
109 |
aggaacctcggtaatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctccta |
208 |
Q |
|
|
||||||||| ||||||||||||||||||||| || | |||||||| ||||||||||||||||||| || |||||| | |||| |||||||||||||| || |
|
|
T |
41503337 |
aggaacctcagtaatcacatttttaaacaaatgattgttacgctcgttccaaatcacccaagatgacaaaagccagattaactgaagaaaagacctctta |
41503238 |
T |
 |
Q |
209 |
gctttgccgaaacctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctccc |
308 |
Q |
|
|
||||||||||||||||||| ||||||||| |||| || |||| ||||||| |||||||||||||||| ||||||||||| |||| | ||||||||||| |
|
|
T |
41503237 |
gctttgccgaaacctgacatactagtgaattgcatgaagtgatcagaaataatgttggagtcaacccccacacaacctatccagtgtcgcacctgctccc |
41503138 |
T |
 |
Q |
309 |
ataaaactgcaaaag |
323 |
Q |
|
|
||||||| ||||||| |
|
|
T |
41503137 |
ataaaaccgcaaaag |
41503123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 322
Target Start/End: Original strand, 20795283 - 20795584
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| ||| |||||||||| |||||| |||||||||| || |||||| |||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
T |
20795283 |
accaccacatatgacttccaaaaacaaaagtgacatttttagctttaagccacactaacgataacaacttaattttatcaagcaatctaggagtctcggt |
20795382 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| ||||||||||| ||||||||| ||||| |||| |||||| | |||| ||||||| || | |||||||||| | ||| |
|
|
T |
20795383 |
tacaacatttttaaacaaacgattattacgctcactccaaatcatccaagtagtcaaaagccagattaactgaagaaacgatcgcctagctttggcaaaa |
20795482 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
|||||||||| |||||||||||| || |||| ||||||| |||||||||| ||||| ||||||||||| ||| ||||| |||||||||||| | |||| |
|
|
T |
20795483 |
cctgacaaacaagtgaactgcactaagtgattagaaataatgttggagtcgacccccacacaacctatccagagccacaattgctcccataaacccgcaa |
20795582 |
T |
 |
Q |
321 |
aa |
322 |
Q |
|
|
|| |
|
|
T |
20795583 |
aa |
20795584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 49265489 - 49265188
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggt |
120 |
Q |
|
|
|||||||||| |||||||||||||| ||||||||||||||||| || |||||| |||| ||||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
49265489 |
accaccacatatgagttccaaaaacaaaagtggcatttttagctttaagccacactaatgataacaacttaattttatcaagcaatctaggagcctcggt |
49265390 |
T |
 |
Q |
121 |
aatcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaa |
220 |
Q |
|
|
| |||||||||||||||||| | |||| |||| ||||||||| ||||| |||| |||||||| |||| ||||||| || | |||||||||| | ||| |
|
|
T |
49265389 |
tacaacatttttaaacaaacgattgttacactcactccaaatcatccaagtagtcaaaagccatattaactgaagaaacgatcgcctagctttggcaaaa |
49265290 |
T |
 |
Q |
221 |
cctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaa |
320 |
Q |
|
|
||||| |||| |||||| ||||| || |||||||||||| |||||||||| ||||| ||||||||||| ||| || || |||||||||||| | |||| |
|
|
T |
49265289 |
cctgataaacaagtgaattgcacgaagtgatgagaaataatgttggagtcgacccccacacaacctatccagagccgcaattgctcccataaatccgcaa |
49265190 |
T |
 |
Q |
321 |
aa |
322 |
Q |
|
|
|| |
|
|
T |
49265189 |
aa |
49265188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 288
Target Start/End: Original strand, 39429894 - 39430160
Alignment:
Q |
22 |
ccaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaatctaggaacctcggta |
121 |
Q |
|
|
||||||||| |||||||||||||| ||||||||||||||||| || |||||| |||| |||||||| || |||||| |||| ||||||||| ||||||| |
|
|
T |
39429894 |
ccaccacatatgagttccaaaaacaaaagtggcatttttagctttaagccacactaacgataacaatttgattttaacaagcaatctaggagcctcggtt |
39429993 |
T |
 |
Q |
122 |
atcacatttttaaacaaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaac |
221 |
Q |
|
|
| |||||||||||||||||| ||||||||||| || |||||||||||| |||| || ||| | |||| ||||||| || | |||||||||| | |||| |
|
|
T |
39429994 |
acaacatttttaaacaaacgattattacgctcactctaaatcacccaagtagtcaaaaaccagattaactgaagaaacgatcgcctagctttggcaaaac |
39430093 |
T |
 |
Q |
222 |
ctgacaaactagtgaactgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctat |
288 |
Q |
|
|
|||| | || ||||||||||| || |||| ||||||| |||||||||| ||||| ||||| ||||| |
|
|
T |
39430094 |
ctgatagacaggtgaactgcacgaagtgattagaaataatgttggagtcgacccccacacagcctat |
39430160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 322
Target Start/End: Original strand, 17827032 - 17827217
Alignment:
Q |
137 |
aaacgaatattacgctcattccaaatcacccaagatgtcagaagccataataaccgaagaaaagacctcctagctttgccgaaacctgacaaactagtga |
236 |
Q |
|
|
|||||| | ||||||||| |||||||||||||||| |||| |||||| | |||| ||| |||||||| |||| ||||| ||||||||||||| ||||| |
|
|
T |
17827032 |
aaacgattgttacgctcactccaaatcacccaagacgtcaaaagccagattaactgaataaaagaccgcctaactttgggaaaacctgacaaacaagtga |
17827131 |
T |
 |
Q |
237 |
actgcacaaaatgatgagaaatagtgttggagtcaaccccaacacaacctattcagtaccacacctgctcccataaaactgcaaaa |
322 |
Q |
|
|
||||||| || |||| ||||||| |||||||||| ||||| ||||||||||| || || ||| ||||||||||| |||||||| |
|
|
T |
17827132 |
actgcacgaagtgattagaaataatgttggagtcgacccccacacaacctatctagagccgcacttgctcccataactctgcaaaa |
17827217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 16874027 - 16873939
Alignment:
Q |
12 |
ataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
||||||||| |||||||||| ||||| ||| ||| || |||| |||||||| ||||||||| |||| |||||||| ||||||||||| |
|
|
T |
16874027 |
ataggacttgaccaccacatatgagtaccataaataaacatggcttttttagctttcagccaccctaatgataacaatttaattttatc |
16873939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 37530179 - 37530263
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatcaagtaa |
105 |
Q |
|
|
|||||||| ||||||||||||||| || || || |||||||| |||||||| ||||||| | |||||||| ||||||||||| |
|
|
T |
37530179 |
accaccactgctgagttccaaaaacaaaggtagcttttttagctttcagccaacctaaagacatcaacttaaccttatcaagtaa |
37530263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 44929851 - 44929923
Alignment:
Q |
21 |
accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaat |
93 |
Q |
|
|
|||||||||||||||| |||||||| || || | ||| |||| ||||||||| ||||||||||| ||||||| |
|
|
T |
44929851 |
accaccacatctgagtaccaaaaacaaacatgacttttatagctttcagccacactaaagataacgacttaat |
44929923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 16266 - 16355
Alignment:
Q |
11 |
cataggactt-accaccacatctgagttccaaaaacgaaagtggcatttttagccttcagccacgctaaagataacaacttaattttatc |
99 |
Q |
|
|
|||||||||| |||||||||||||||| ||| |||| || |||| |||||||| ||||||||| |||| |||||||| ||||| ||||| |
|
|
T |
16266 |
cataggacttgaccaccacatctgagtaccataaacaaacatggcttttttagctttcagccaccctaatgataacaatttaatcttatc |
16355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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