View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10113_high_13 (Length: 242)
Name: NF10113_high_13
Description: NF10113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10113_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 13616933 - 13616728
Alignment:
| Q |
16 |
atgaagtatgtaggaaggaagtatcaactaacttactagaagaaaaattataagcatttttagatgagtaatcaccatctttttcgcccttcaaatttgc |
115 |
Q |
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| T |
13616933 |
atgaagtatgtaggaaggaagtatcaactaacttactagaagaaaaattataagcatttttagatgagtaatcaccatccttttcgcccttcaaatttgc |
13616834 |
T |
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| Q |
116 |
ttaccctctattacaccataggagataacaatgtattgacaatattagccacattatcattatcatcaactacaaatgtaatcaatagaatgttctaagg |
215 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13616833 |
ttaccctctatt--accataggagataacaatgtattgacaatattagccacattatcattatcatcaactacaaatgtaatcaatagaatgttctaagg |
13616736 |
T |
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| Q |
216 |
cttatcat |
223 |
Q |
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|||||||| |
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| T |
13616735 |
cttatcat |
13616728 |
T |
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