View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10113_low_13 (Length: 400)
Name: NF10113_low_13
Description: NF10113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10113_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 20 - 390
Target Start/End: Original strand, 5837095 - 5837465
Alignment:
| Q |
20 |
agagggagtgatgaatggtttgtttgtcagttttggacagacagtgttaaggaagttcaaataggtgaagtttgtatttgcagtgattgttcttgctgtt |
119 |
Q |
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| T |
5837095 |
agagggagtgatgaatggtttgtttgtcagttttggacagacagtgttaaggaagttcaaataggtgaagtttgtatttgcagtgattgttcttgctgtt |
5837194 |
T |
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| Q |
120 |
tttggtggtgttgggagtataaagagaatctgtgtatgacacgtggcagaaagctagtggtgtgggaaagttgtgacattatctatcttgtgggtggcta |
219 |
Q |
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| T |
5837195 |
tttggtggtgttgggagtataaagagaatctgtgtatgacacgtggcagaaaactagtggtgtgggaaagttgtgacattatctatcttgtgggtggcta |
5837294 |
T |
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| Q |
220 |
tgctttgtggtagggacaagttttggggtcagaggattgagattgtaaatttttaatgtgcttaacaatcatgagtagaagaaacaaaactactaataat |
319 |
Q |
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| T |
5837295 |
tgctttgtggtagggacaagttttggggtcagaggattgagattgtaaatttttaatgtgcttaacaatcatgagtagaagaaacaaaactactaataat |
5837394 |
T |
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| Q |
320 |
ggtttatttatatcttaaaatgtcatgtaaaaaataatattatagtatatgcttgttaaatttgtcctatg |
390 |
Q |
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| T |
5837395 |
ggtttatttatatcttaaaatgtcatgttaaaaataatattatagtatatgcttgttaaatttgtcctatg |
5837465 |
T |
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