View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10113_low_27 (Length: 286)
Name: NF10113_low_27
Description: NF10113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10113_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 42900102 - 42900211
Alignment:
| Q |
9 |
aaggaaagaaaaggaggttttgagatgacactttaaaacaaacacactcgaaggttttgtaccaatcaaaatgagtttattgtttgagacttctgattaa |
108 |
Q |
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| T |
42900102 |
aaggaaagaaaaggaggttttgagatgacactttaagacgaacacactcgaaagttctgtaccaatcaaaatgggtttatcgtttgagacttctgattaa |
42900201 |
T |
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| Q |
109 |
ttttaacttt |
118 |
Q |
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|||||||||| |
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| T |
42900202 |
ttttaacttt |
42900211 |
T |
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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 273
Target Start/End: Original strand, 42900311 - 42900350
Alignment:
| Q |
234 |
ctttctaatatatgttgtcttactttgataagttcctcct |
273 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
42900311 |
ctttctaatatatgttgtcttactttgataagttcctcct |
42900350 |
T |
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