View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10114_low_13 (Length: 385)

Name: NF10114_low_13
Description: NF10114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10114_low_13
NF10114_low_13
[»] chr1 (29 HSPs)
chr1 (1-369)||(22869775-22870149)
chr1 (197-239)||(3341785-3341827)
chr1 (196-239)||(5684125-5684168)
chr1 (196-239)||(9768858-9768901)
chr1 (196-239)||(18003819-18003862)
chr1 (196-239)||(43020614-43020657)
chr1 (196-238)||(9004349-9004391)
chr1 (196-238)||(9769630-9769672)
chr1 (196-239)||(13870130-13870174)
chr1 (196-239)||(29491472-29491516)
chr1 (196-239)||(39238718-39238762)
chr1 (196-239)||(40678825-40678869)
chr1 (196-239)||(47763434-47763478)
chr1 (200-239)||(195051-195090)
chr1 (196-239)||(11238077-11238120)
chr1 (196-239)||(16182812-16182855)
chr1 (200-239)||(42908778-42908817)
chr1 (196-239)||(43327013-43327056)
chr1 (196-239)||(52961131-52961174)
chr1 (196-238)||(18179331-18179373)
chr1 (199-239)||(17350066-17350107)
chr1 (198-239)||(26350027-26350068)
chr1 (196-239)||(2052731-2052775)
chr1 (196-239)||(9527428-9527472)
chr1 (196-239)||(19976601-19976645)
chr1 (198-238)||(34698100-34698140)
chr1 (196-239)||(38021254-38021298)
chr1 (196-236)||(47645848-47645888)
chr1 (196-236)||(51917554-51917594)
[»] chr7 (21 HSPs)
chr7 (196-239)||(35195846-35195889)
chr7 (14-102)||(36953006-36953094)
chr7 (196-239)||(7465469-7465512)
chr7 (196-239)||(32814830-32814873)
chr7 (196-239)||(35498401-35498444)
chr7 (201-239)||(9351042-9351080)
chr7 (199-236)||(19924773-19924810)
chr7 (196-237)||(45267977-45268018)
chr7 (196-239)||(14818414-14818458)
chr7 (196-239)||(15265412-15265456)
chr7 (196-239)||(31475889-31475933)
chr7 (196-239)||(41139089-41139133)
chr7 (196-235)||(17305443-17305482)
chr7 (196-238)||(23470550-23470592)
chr7 (198-236)||(27726421-27726459)
chr7 (196-234)||(32514690-32514728)
chr7 (198-239)||(10020518-10020559)
chr7 (194-239)||(40213334-40213379)
chr7 (196-235)||(4169078-4169118)
chr7 (196-239)||(21285402-21285446)
chr7 (199-239)||(48174973-48175013)
[»] chr5 (17 HSPs)
chr5 (196-239)||(31280428-31280471)
chr5 (196-239)||(37303936-37303980)
chr5 (196-239)||(11246543-11246586)
chr5 (196-239)||(20186869-20186912)
chr5 (196-239)||(38040269-38040312)
chr5 (196-239)||(1463873-1463917)
chr5 (196-232)||(31280602-31280638)
chr5 (196-239)||(7147068-7147111)
chr5 (196-239)||(10106633-10106676)
chr5 (196-239)||(25660915-25660958)
chr5 (196-239)||(35813291-35813334)
chr5 (199-238)||(42781644-42781683)
chr5 (199-236)||(30733125-30733163)
chr5 (196-238)||(36742017-36742059)
chr5 (196-239)||(4674864-4674908)
chr5 (196-239)||(6447529-6447573)
chr5 (202-238)||(34325274-34325310)
[»] chr4 (29 HSPs)
chr4 (196-239)||(41492547-41492590)
chr4 (196-239)||(20610742-20610785)
chr4 (196-239)||(27921899-27921942)
chr4 (196-239)||(49319396-49319439)
chr4 (196-239)||(54854228-54854271)
chr4 (196-238)||(49039495-49039537)
chr4 (196-239)||(28520780-28520824)
chr4 (196-239)||(53815698-53815742)
chr4 (200-239)||(20166323-20166362)
chr4 (196-239)||(21664082-21664125)
chr4 (196-239)||(21672846-21672889)
chr4 (204-239)||(21752809-21752844)
chr4 (198-233)||(32325398-32325433)
chr4 (196-235)||(33434688-33434727)
chr4 (196-239)||(39293524-39293567)
chr4 (196-239)||(42758212-42758255)
chr4 (196-239)||(49743365-49743408)
chr4 (198-239)||(14149797-14149839)
chr4 (196-238)||(17268613-17268655)
chr4 (196-238)||(38657543-38657585)
chr4 (196-239)||(8690216-8690260)
chr4 (196-239)||(9084761-9084805)
chr4 (196-239)||(9692964-9693008)
chr4 (203-235)||(30565364-30565396)
chr4 (196-239)||(33076535-33076576)
chr4 (196-239)||(36008277-36008321)
chr4 (196-239)||(42411503-42411547)
chr4 (196-239)||(48512201-48512245)
chr4 (196-239)||(48968259-48968303)
[»] chr2 (12 HSPs)
chr2 (196-239)||(34107277-34107320)
chr2 (196-239)||(5772863-5772906)
chr2 (196-239)||(17896828-17896871)
chr2 (198-237)||(32944067-32944106)
chr2 (196-239)||(39334930-39334973)
chr2 (196-239)||(41305115-41305158)
chr2 (198-239)||(32527126-32527168)
chr2 (198-239)||(35352459-35352500)
chr2 (200-239)||(2304296-2304336)
chr2 (196-239)||(29034978-29035022)
chr2 (196-239)||(40044128-40044172)
chr2 (203-239)||(40471163-40471199)
[»] scaffold0712 (1 HSPs)
scaffold0712 (196-239)||(4523-4566)
[»] scaffold0709 (1 HSPs)
scaffold0709 (196-239)||(4543-4586)
[»] scaffold0168 (1 HSPs)
scaffold0168 (196-239)||(34082-34125)
[»] chr8 (28 HSPs)
chr8 (196-239)||(7345431-7345474)
chr8 (196-239)||(29937213-29937256)
chr8 (194-239)||(16611586-16611631)
chr8 (196-239)||(2800021-2800065)
chr8 (199-239)||(6372652-6372692)
chr8 (196-239)||(10292354-10292398)
chr8 (199-239)||(11900572-11900612)
chr8 (196-239)||(14011087-14011130)
chr8 (196-239)||(16808410-16808453)
chr8 (196-239)||(18577116-18577159)
chr8 (200-239)||(39208910-39208949)
chr8 (196-239)||(39432377-39432420)
chr8 (196-238)||(26657859-26657901)
chr8 (196-238)||(29653057-29653099)
chr8 (196-237)||(20784702-20784743)
chr8 (199-239)||(35301212-35301253)
chr8 (196-236)||(216199-216239)
chr8 (196-236)||(220414-220454)
chr8 (196-236)||(689569-689609)
chr8 (196-236)||(692759-692799)
chr8 (196-236)||(696968-697008)
chr8 (196-236)||(729822-729862)
chr8 (196-236)||(734037-734077)
chr8 (196-236)||(853717-853757)
chr8 (196-236)||(857933-857973)
chr8 (196-239)||(1588769-1588813)
chr8 (196-239)||(2696535-2696579)
chr8 (196-239)||(38790622-38790666)
[»] chr6 (17 HSPs)
chr6 (196-239)||(34524878-34524921)
chr6 (198-238)||(9031771-9031811)
chr6 (196-239)||(9064868-9064912)
chr6 (196-239)||(14981751-14981795)
chr6 (196-235)||(8309167-8309206)
chr6 (196-235)||(19135932-19135971)
chr6 (196-239)||(20858432-20858475)
chr6 (196-239)||(30833020-30833063)
chr6 (198-232)||(6219359-6219393)
chr6 (198-239)||(17305521-17305562)
chr6 (196-239)||(2945598-2945642)
chr6 (203-239)||(4844153-4844189)
chr6 (196-239)||(6143967-6144011)
chr6 (196-236)||(14948836-14948876)
chr6 (198-238)||(17176154-17176194)
chr6 (196-236)||(25741981-25742021)
chr6 (196-236)||(25747892-25747932)
[»] chr3 (23 HSPs)
chr3 (200-239)||(12236606-12236645)
chr3 (196-239)||(16874239-16874282)
chr3 (196-239)||(23237365-23237408)
chr3 (196-244)||(4010062-4010110)
chr3 (196-239)||(9624985-9625029)
chr3 (196-239)||(14868687-14868731)
chr3 (196-239)||(27183730-27183774)
chr3 (203-239)||(34407139-34407175)
chr3 (196-232)||(38507651-38507687)
chr3 (196-239)||(47191375-47191419)
chr3 (196-239)||(52030123-52030167)
chr3 (196-239)||(3973305-3973348)
chr3 (196-239)||(3996528-3996571)
chr3 (196-239)||(6951839-6951882)
chr3 (196-239)||(19137622-19137665)
chr3 (196-239)||(31108809-31108852)
chr3 (198-240)||(12143455-12143497)
chr3 (196-242)||(24130562-24130608)
chr3 (196-234)||(30745785-30745823)
chr3 (199-237)||(51017796-51017834)
chr3 (196-237)||(51412041-51412082)
chr3 (196-239)||(3784072-3784116)
chr3 (196-239)||(36331775-36331819)
[»] scaffold0809 (1 HSPs)
scaffold0809 (196-239)||(4854-4898)
[»] scaffold0070 (1 HSPs)
scaffold0070 (196-239)||(12567-12611)
[»] scaffold0036 (1 HSPs)
scaffold0036 (196-239)||(25028-25072)
[»] scaffold0002 (1 HSPs)
scaffold0002 (199-239)||(440405-440445)


Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 22870149 - 22869775
Alignment:
Q  1 agtattaaggatgttgatatgttggcagaaatgttcattgcaaattgtcatgagaagtttaaggttgaaaaggaggaatcttatagaaggtatcaagaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22870149 agtattaaggatgttgatatgttggcagaaatgttcattgcaaattgtcatgagaagtttaaggttgaaaaggaggaatcttatagaaggtatcaggaaa 22870050  T
Q  101 tgttggttaggagtttgtaataagaagacacggttagnnnnnnnnnnnnnnnnnntttgaaaacatttagagatggaattaaagatgcatgtctcagcat 200  Q
    |||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||    
T  22870049 tgttggttaggagtttgtaataagaagacacggttagaaaagaaaaaagaaaaaaattgaaaacatttagagatggaattaaagatgcatgtctcagcat 22869950  T
Q  201 agctcagttggcagggacatgtattattatatgcaggggacgcattttttcgtctataattcacg-tcgctagctatttctacttcttagtagtaacgtt 299  Q
    | |||| ||  ||  |||||| ||||||||||| ||||||  ||||||||| | |||||||| || || ||||||||||||||||||||||||||| |||    
T  22869949 aactcaattaacaatgacatgcattattatatgtaggggatacattttttcatgtataattctcgatctctagctatttctacttcttagtagtaatgtt 22869850  T
Q  300 gaaaatgttag-----tttacagattagaatttaagtcacttgttaattactattgggtataggttattgtaaat 369  Q
    |||||||||||     |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22869849 gaaaatgttagttatttttacaaattagaatttaagtcacttgttaattaccattgggtataggttattgtaaat 22869775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 3341827 - 3341785
Alignment:
Q  197 gcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  3341827 gcatagctcagttggcagggacatgcattattatatgcagggg 3341785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 5684125 - 5684168
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  5684125 agcatagctcagttggcagagacatgcattattatatgcagggg 5684168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 9768901 - 9768858
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  9768901 agcatagctcagttggcagggacatgcattgttatatgcagggg 9768858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 18003819 - 18003862
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  18003819 agcatagctcagttggcagggacatgcattgttatatgcagggg 18003862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 43020614 - 43020657
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||| ||||||||||||||| |||||||||||||||||    
T  43020614 agcatagctcggttggcagggacatgcattattatatgcagggg 43020657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 9004349 - 9004391
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  9004349 agcatagctcagttggcagggacatatattgttatatgcaggg 9004391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 9769672 - 9769630
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  9769672 agcatagctcagttggcagggacatgcattattatatgtaggg 9769630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 13870174 - 13870130
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  13870174 agcatagctcagttggcagggacaatgcattattatatgcagggg 13870130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 29491472 - 29491516
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  29491472 agcatagctcagttggcagggacaatgcattattatatgcagggg 29491516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 39238718 - 39238762
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  39238718 agcatagctcagttggcagggacaatgcattattatatgcagggg 39238762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 40678825 - 40678869
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  40678825 agcatagctcagttggcagggacaatgcattattatatgcagggg 40678869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 47763478 - 47763434
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  47763478 agcatagctcagttggcagggacaatgcattattatatgcagggg 47763434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 195051 - 195090
Alignment:
Q  200 tagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  195051 tagctcagttggcagggacatgcataattatatgcagggg 195090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 11238120 - 11238077
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||    
T  11238120 agcatagctcagatggcatggacatgcattattatatgcagggg 11238077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 16182812 - 16182855
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||    
T  16182812 agcatagctcagttggcagagacatgcattattatatgtagggg 16182855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 42908778 - 42908817
Alignment:
Q  200 tagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  42908778 tagctcagttggcagggacatgcattgttatatgcagggg 42908817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 43327013 - 43327056
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||    
T  43327013 agcataactcagtttgcagggacatgtattgttatatgcagggg 43327056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 52961174 - 52961131
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||    
T  52961174 agcatagctcagttggcaaggacatgcattgttatatgcagggg 52961131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 18179331 - 18179373
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||    
T  18179331 agcataactcagttggcagggacatgcattgttatatgcaggg 18179373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 17350066 - 17350107
Alignment:
Q  199 atagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  17350066 atagctcagttggcagggacaatgcattattatatgcagggg 17350107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 26350068 - 26350027
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||| || |||||| ||||||||||||||||||||||||    
T  26350068 catagcttagatggcagagacatgtattattatatgcagggg 26350027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 2052775 - 2052731
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  2052775 agcatagctcagttggcagggacaatgcattatcatatgcagggg 2052731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 9527428 - 9527472
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  9527428 agcatagctcagttggcagggacaatgcattgttatatgcagggg 9527472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 19976645 - 19976601
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||    
T  19976645 agcatagctcagttggcagggacaatgtatggttatatgcagggg 19976601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 34698100 - 34698140
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||||||||| |||||||||| ||||||||||| ||||    
T  34698100 catagctcagttgacagggacatgcattattatatgtaggg 34698140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 38021254 - 38021298
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||    
T  38021254 agcatagctcagttggcaaggacaatgcattattatatgcagggg 38021298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 47645888 - 47645848
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    ||||||||||||||||||| |||||| ||| ||||||||||    
T  47645888 agcatagctcagttggcagagacatgcattgttatatgcag 47645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 51917594 - 51917554
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    ||||||||||||||||||  |||||| ||||||||||||||    
T  51917594 agcatagctcagttggcatagacatgcattattatatgcag 51917554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 35195846 - 35195889
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  35195846 agcatagctcagttggcagggacatgcattattatatgcagggg 35195889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 36953006 - 36953094
Alignment:
Q  14 ttgatatgttggcagaaatgttcattgcaaattgtcatgagaagtttaaggttgaaaaggaggaatcttatagaaggtatcaagaaatg 102  Q
    |||||||||| || |||||||| ||||| ||||||||||||||||| ||| | |||||  | |||||| |||| | |||||||||||||    
T  36953006 ttgatatgttagctgaaatgtttattgctaattgtcatgagaagttcaagttggaaaaacaagaatctgataggaagtatcaagaaatg 36953094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 7465469 - 7465512
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  7465469 agcatagctcagttggcagagacatgcattattatatgcagggg 7465512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 32814830 - 32814873
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  32814830 agcatagctcagttggtagggacatgcattattatatgcagggg 32814873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 35498401 - 35498444
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  35498401 agcataactcagttggcagggacatgcattattatatgcagggg 35498444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 9351042 - 9351080
Alignment:
Q  201 agctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  9351042 agctcagttgacagggacatgtattattatatgcagggg 9351080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 19924773 - 19924810
Alignment:
Q  199 atagctcagttggcagggacatgtattattatatgcag 236  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19924773 atagctcagttggcagggacatgcattattatatgcag 19924810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 45268018 - 45267977
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagg 237  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  45268018 agcatagctcagttggcagagacatatattattatatgcagg 45267977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 14818458 - 14818414
Alignment:
Q  196 agcatagctcagttggcagggaca-tgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  14818458 agcatagctcagttggcagggacagtgcattattatatgcagggg 14818414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 15265456 - 15265412
Alignment:
Q  196 agcatagctcagttggcagggaca-tgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  15265456 agcatagctcagttggcagggacagtgcattattatatgcagggg 15265412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 31475933 - 31475889
Alignment:
Q  196 agcatagctcagttggcagggaca-tgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  31475933 agcatagctcagttggcagggacattgcattattatatgcagggg 31475889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 41139089 - 41139133
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  41139089 agcatagctcagttggcagggacaatgcattattatatgcagggg 41139133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 17305482 - 17305443
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgca 235  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  17305482 agcatagctcagttggcagggacatgcattgttatatgca 17305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 23470592 - 23470550
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    |||||||||||||||||| | ||||||||||||||||| ||||    
T  23470592 agcatagctcagttggcatgaacatgtattattatatgtaggg 23470550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 27726459 - 27726421
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  27726459 catagctcagttggcagggacatgcattattataagcag 27726421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 32514728 - 32514690
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgc 234  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  32514728 agcatagttcagttggcagagacatgtattattatatgc 32514690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 10020559 - 10020518
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||| |||||||||| ||| |||||||||||||    
T  10020559 catagctcagttgacagggacatgcattgttatatgcagggg 10020518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 40213379 - 40213334
Alignment:
Q  194 tcagcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||| || |||| |||| |||||||||||||||||||||||||||    
T  40213379 tcagcctatctcaattggtagggacatgtattattatatgcagggg 40213334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 4169078 - 4169118
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgca 235  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  4169078 agcatagctcagttggcagggacaatgtattgttatatgca 4169118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 21285446 - 21285402
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  21285446 agcatagctcagttggcagggacaatgcattgttatatgcagggg 21285402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 48174973 - 48175013
Alignment:
Q  199 atagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||| ||||||| |||||||||| ||||||    
T  48174973 atagctcagttggcaaggacatgcattattatatacagggg 48175013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 31280471 - 31280428
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  31280471 agcatagctcagttggcagggacatgtattactatatgcagggg 31280428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 37303936 - 37303980
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  37303936 agcatagctcagttggcagggacaatgtattattatatgcagggg 37303980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 11246586 - 11246543
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  11246586 agcatagctcagttggcagggacatgcattgttatatgcagggg 11246543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 20186869 - 20186912
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  20186869 agcattgctcagttggcagggacatgcattattatatgcagggg 20186912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 38040269 - 38040312
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  38040269 agcatagctcagttggcagggacatgcattgttatatgcagggg 38040312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 1463873 - 1463917
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  1463873 agcatagctcagttggcagggacaatgcattattatatgcagggg 1463917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 31280638 - 31280602
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatat 232  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31280638 agcatagctcagttggcagggacatgcattattatat 31280602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 7147111 - 7147068
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| | ||||||| |||||||||||||||||    
T  7147111 agcatagctcagttggtaaggacatgcattattatatgcagggg 7147068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 10106633 - 10106676
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||  ||||||||||| |||||    
T  10106633 agcatagctcagttggcagggacatccattattatatgtagggg 10106676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 25660915 - 25660958
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||    
T  25660915 agcatagctcagttggcagggatatgcattgttatatgcagggg 25660958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 35813334 - 35813291
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||    
T  35813334 agcatagctcagttgacagggacatgcattgttatatgcagggg 35813291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 42781683 - 42781644
Alignment:
Q  199 atagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  42781683 atagctcagttggcagggacatgcattgttatatgcaggg 42781644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 30733125 - 30733163
Alignment:
Q  199 atagctcagttggcagggac-atgtattattatatgcag 236  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30733125 atagctcagttggcagggacaatgtattattatatgcag 30733163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 36742059 - 36742017
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||    
T  36742059 agcatagctcagttggcagagacatgaattgttatatgcaggg 36742017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 4674908 - 4674864
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||    
T  4674908 agcatagctcagttgacagggacaatgcattattatatgcagggg 4674864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 6447573 - 6447529
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||    
T  6447573 agcataactcagttggcagggacaatgcattattatatgcagggg 6447529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 34325274 - 34325310
Alignment:
Q  202 gctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  34325274 gctcagttgacagggacatgcattattatatgcaggg 34325310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 41492590 - 41492547
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  41492590 agcatagctcagttggcagggacatgcattattatatgcagggg 41492547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 20610742 - 20610785
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  20610742 agcatagctcagttggcagggacatgcattgttatatgcagggg 20610785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 27921899 - 27921942
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||||||| |||||||||||||||||    
T  27921899 agcatagctcagttggtagggacatgcattattatatgcagggg 27921942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 49319396 - 49319439
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  49319396 agcatagctcagttggcatggacatgcattattatatgcagggg 49319439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 54854271 - 54854228
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| || ||||||||||||||    
T  54854271 agcatagctcagttggcagggacatgcataattatatgcagggg 54854228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 49039537 - 49039495
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    |||||||||||||||||||||||||| ||| ||||||||||||    
T  49039537 agcatagctcagttggcagggacatgcattgttatatgcaggg 49039495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 28520824 - 28520780
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  28520824 agcatagctcagttggcagggacaatgcattattatatgcagggg 28520780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 53815698 - 53815742
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  53815698 agcatagctcagttggcagggacaatgcattattatatgcagggg 53815742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 20166323 - 20166362
Alignment:
Q  200 tagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  20166323 tagctcagttggcagggacatgcattgttatatgcagggg 20166362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 21664082 - 21664125
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||    
T  21664082 agcatagctcagttggtagggatatgtataattatatgcagggg 21664125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 21672846 - 21672889
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||    
T  21672846 agcatagctcagttggtagggatatgtataattatatgcagggg 21672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 21752809 - 21752844
Alignment:
Q  204 tcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  21752809 tcagttggcaaggacatgtattattatatgcagggg 21752844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 32325433 - 32325398
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatg 233  Q
    |||||||||||||| |||||||||||||||||||||    
T  32325433 catagctcagttggtagggacatgtattattatatg 32325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 33434688 - 33434727
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgca 235  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  33434688 agcatagctcagttggcagtgacatgtaatattatatgca 33434727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 39293524 - 39293567
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||||||| || ||||||||||||||    
T  39293524 agcatagctcagttggtagggacatgcataattatatgcagggg 39293567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 42758255 - 42758212
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||| | ||||||||| |||||||||||||||||    
T  42758255 agcatagctcagtttgtagggacatgcattattatatgcagggg 42758212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 49743365 - 49743408
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||    
T  49743365 agcatagttcagttggcagggatatgcattattatatgcagggg 49743408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 14149797 - 14149839
Alignment:
Q  198 catagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  14149797 catagctcagttggcagggacaatgcattattatatgcagggg 14149839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 17268655 - 17268613
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||    
T  17268655 agcatagttcagttggcaggaacatgtattattatatgtaggg 17268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 38657543 - 38657585
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    
T  38657543 agcatggctcagttggcagggacatgcattgttatatgcaggg 38657585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 8690216 - 8690260
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||    
T  8690216 agcatagctcagttggcaaggacaatgcattattatatgcagggg 8690260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 9084761 - 9084805
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  9084761 agcatagctcagttggcagggacaatgcattgttatatgcagggg 9084805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 9692964 - 9693008
Alignment:
Q  196 agcatagctcagttggcaggga-catgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||    
T  9692964 agcatagctcagttggcagggataatgcattattatatgcagggg 9693008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 30565364 - 30565396
Alignment:
Q  203 ctcagttggcagggacatgtattattatatgca 235  Q
    ||||||||||||||||||||||| |||||||||    
T  30565364 ctcagttggcagggacatgtattgttatatgca 30565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 33076535 - 33076576
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||  |||||||| |||||||||||||||||    
T  33076535 agcatagctcagttgg--gggacatgcattattatatgcagggg 33076576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 36008277 - 36008321
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  36008277 agcatagctcagttggcagggacaatgcattgttatatgcagggg 36008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 42411547 - 42411503
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||    
T  42411547 agcatagctcagttggcagggacaatgcataattatatgcagggg 42411503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 48512201 - 48512245
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  48512201 agcatagctcagttggcagggacaatgcattgttatatgcagggg 48512245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 48968303 - 48968259
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||    
T  48968303 agcatagttcagttggcagggacaatgcattattatatgcagggg 48968259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 34107277 - 34107320
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  34107277 agcatagctcagttggcagggacatgtataattatatgcagggg 34107320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 5772863 - 5772906
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  5772863 agcatagctcagttggcaaggacatgtattgttatatgcagggg 5772906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 17896828 - 17896871
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| || ||||||| ||||||    
T  17896828 agcatagctcagttggcagggacatgcataattatatacagggg 17896871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 32944067 - 32944106
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcagg 237  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  32944067 catagctcagttggcatggacatgcattattatatgcagg 32944106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 39334973 - 39334930
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||    
T  39334973 agcataactcagttggcagggacatgcattattatatacagggg 39334930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 41305158 - 41305115
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||    
T  41305158 agcatagctcagttggcagaggcatgtattagtatatgcagggg 41305115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 32527168 - 32527126
Alignment:
Q  198 catagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  32527168 catagctcagttggcagggacaatgcattattatatgcagggg 32527126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 35352500 - 35352459
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  35352500 catagctcagttggcagggacatgcataattatatgcggggg 35352459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 2304296 - 2304336
Alignment:
Q  200 tagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  2304296 tagctcagttggcagggacaatgtattattatatgtagggg 2304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 29034978 - 29035022
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  29034978 agcatagctcacttggcagggacaatgcattattatatgcagggg 29035022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 40044172 - 40044128
Alignment:
Q  196 agcatagctcagttggcagggaca-tgtattattatatgcagggg 239  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  40044172 agcatagctcagttggtaaggacaatgtattattatatgcagggg 40044128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 40471163 - 40471199
Alignment:
Q  203 ctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||| |||||||||| |||||||||||||||||    
T  40471163 ctcagttgacagggacatgcattattatatgcagggg 40471199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 4523 - 4566
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  4523 agcatagctcagttggcagggacatgcattgttatatgcagggg 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 4543 - 4586
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  4543 agcatagctcagttggcagggacatgcattgttatatgcagggg 4586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 34125 - 34082
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  34125 agcatagctcagttggcagggacatgcattgttatatgcagggg 34082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 7345431 - 7345474
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  7345431 agcataactcagttggcagggacatgcattattatatgcagggg 7345474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 29937213 - 29937256
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  29937213 agcatagctcagttggtagggacatgtattgttatatgcagggg 29937256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 16611586 - 16611631
Alignment:
Q  194 tcagcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||    
T  16611586 tcagcatagatcagttggcagggacatgcattattatatgtagggg 16611631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 2800021 - 2800065
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  2800021 agcatagctcagttggcagggacaatgcattattatatgcagggg 2800065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 6372692 - 6372652
Alignment:
Q  199 atagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  6372692 atagctcagttggcagggacatgcataattatatgcagggg 6372652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 10292354 - 10292398
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  10292354 agcatagctcagttggcagggacaatgcattattatatgcagggg 10292398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 11900572 - 11900612
Alignment:
Q  199 atagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  11900572 atagctcagttggcaggaacatgcattattatatgcagggg 11900612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 14011130 - 14011087
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||    
T  14011130 agcatagttcagttggcagggacatgcattgttatatgcagggg 14011087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 16808453 - 16808410
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||    
T  16808453 agcataactcagttagcagggacatgcattattatatgcagggg 16808410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 18577116 - 18577159
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| |||||||| |||||||||||||| |||||||||||||    
T  18577116 agcataactcagttgacagggacatgtattgttatatgcagggg 18577159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 39208949 - 39208910
Alignment:
Q  200 tagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  39208949 tagctcagtttgcagggacatgcattattatatgcagggg 39208910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 39432420 - 39432377
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| | | |||||||||||||    
T  39432420 agcatagctcagttggcagggacatgcaatgttatatgcagggg 39432377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 26657859 - 26657901
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||    
T  26657859 agcatagctcagttggtagggacatgcattgttatatgcaggg 26657901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 29653057 - 29653099
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||    
T  29653057 agcatagttcaattggcagggacatgcattattatatgcaggg 29653099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 20784743 - 20784702
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagg 237  Q
    ||||||| |||||||||||| ||||| |||||||||||||||    
T  20784743 agcatagttcagttggcaggaacatgcattattatatgcagg 20784702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 35301253 - 35301212
Alignment:
Q  199 atagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  35301253 atagctcagttggcagggacaatgcattattatatgcagggg 35301212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 216239 - 216199
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  216239 agcatagctcagttggcagggacatacattgttatatgcag 216199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 220454 - 220414
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  220454 agcatagctcagttggcagggacatgcaatgttatatgcag 220414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 689609 - 689569
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  689609 agcatagctcagttggcagggacatgcaatgttatatgcag 689569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 692799 - 692759
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  692799 agcatagctcagttggcagggacatacattgttatatgcag 692759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 697008 - 696968
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  697008 agcatagctcagttggcagggacatacattgttatatgcag 696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 729862 - 729822
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  729862 agcatagctcagttggcagggacatacattgttatatgcag 729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 734077 - 734037
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  734077 agcatagctcagttggcagggacatgcaatgttatatgcag 734037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 853757 - 853717
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||  ||| ||||||||||    
T  853757 agcatagctcagttggcagggacatacattgttatatgcag 853717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 857973 - 857933
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||||||||||||||||||| | | ||||||||||    
T  857973 agcatagctcagttggcagggacatgcaatgttatatgcag 857933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 1588769 - 1588813
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||    
T  1588769 agcatagcttagttggcagggacaatgcattattatatgcagggg 1588813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 2696535 - 2696579
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||    
T  2696535 agcataactcagttggcagggacaatgcattattatatgcagggg 2696579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 38790666 - 38790622
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||    
T  38790666 agcataactcagttggcagggacaatgcattattatatgcagggg 38790622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 34524878 - 34524921
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  34524878 agcatagctcagttggcagggacatgcattgttatatgcagggg 34524921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 9031771 - 9031811
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcaggg 238  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  9031771 catagctcagttggcagggacatgcattgttatatgcaggg 9031811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 9064868 - 9064912
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  9064868 agcatagctcagttggcagggacaatgcattattatatgcagggg 9064912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 14981795 - 14981751
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  14981795 agcatagctcagttggcagggacaatgcattattatatgcagggg 14981751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 8309167 - 8309206
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgca 235  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  8309167 agcatagctcagttggcagggacatgcattgttatatgca 8309206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 19135932 - 19135971
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgca 235  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  19135932 agcatagctcggttggcagggacatgcattattatatgca 19135971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 20858475 - 20858432
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||    
T  20858475 agcataactcagttggcagggacatgcattgttatatgcagggg 20858432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 30833020 - 30833063
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||    
T  30833020 agcatagttcagttggcagggacatgcattgttatatgcagggg 30833063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 232
Target Start/End: Original strand, 6219359 - 6219393
Alignment:
Q  198 catagctcagttggcagggacatgtattattatat 232  Q
    |||||||||||||||||||||||| ||||||||||    
T  6219359 catagctcagttggcagggacatgcattattatat 6219393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 17305521 - 17305562
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  17305521 cataactcagttggtagggacatgcattattatatgcagggg 17305562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 2945598 - 2945642
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  2945598 agcatagctcagttggcagggacaatgcattgttatatgcagggg 2945642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 4844153 - 4844189
Alignment:
Q  203 ctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  4844153 ctcagttggcagggacatgcattgttatatgcagggg 4844189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 6143967 - 6144011
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  6143967 agcatagctcagttggcagggacaatgcattattatatgtagggg 6144011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 14948876 - 14948836
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    ||||||||||||||| |||||||||  ||||||||||||||    
T  14948876 agcatagctcagttgacagggacatacattattatatgcag 14948836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 17176154 - 17176194
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcaggg 238  Q
    ||||||||||||| |||||||||| ||| ||||||||||||    
T  17176154 catagctcagttgacagggacatgcattgttatatgcaggg 17176194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 25742021 - 25741981
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  25742021 agcatagctccgttgacagggacatgtataattatatgcag 25741981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 25747932 - 25747892
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcag 236  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  25747932 agcatagctccgttgacagggacatgtataattatatgcag 25747892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 12236606 - 12236645
Alignment:
Q  200 tagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  12236606 tagctcagttggcagggacatgcattattatatgcagggg 12236645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 16874282 - 16874239
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  16874282 agcatagctcagttggcagggacatgcattgttatatgcagggg 16874239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 23237365 - 23237408
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  23237365 agcatagctcagttggcagggacatgcattattatatgtagggg 23237408  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 4010110 - 4010062
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggggacgca 244  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||| ||||    
T  4010110 agcatagctcagttggtagggacatgcattgttatatgcaggggccgca 4010062  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 9624985 - 9625029
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  9624985 agcatagctcagttggcagggacaatgcattattatatgcagggg 9625029  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 14868687 - 14868731
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  14868687 agcatagctcagttggcagggacaatgcattattatatgcagggg 14868731  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 27183774 - 27183730
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  27183774 agcatagctcagttggcagggacaatgcattattatatgcagggg 27183730  T

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Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 34407175 - 34407139
Alignment:
Q  203 ctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34407175 ctcagttggcagggacatgcattattatatgcagggg 34407139  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 38507651 - 38507687
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatat 232  Q
    |||||||||||||||||||||||||| ||||||||||    
T  38507651 agcatagctcagttggcagggacatgcattattatat 38507687  T

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Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 47191375 - 47191419
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  47191375 agcatagctcagttggcagggacaatgcattattatatgcagggg 47191419  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 52030123 - 52030167
Alignment:
Q  196 agcatagctcagttggcagggaca-tgtattattatatgcagggg 239  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  52030123 agcataactcagttggcagggacaatgtattattatatgcagggg 52030167  T

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Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 3973305 - 3973348
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||    
T  3973305 agcatagctcagttggtagggacatgcattgttatatgcagggg 3973348  T

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Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 3996571 - 3996528
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||    
T  3996571 agcatagctcagttggtagggacatgcattgttatatgcagggg 3996528  T

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Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 6951882 - 6951839
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| |||||||| |||||||||| |||||||||||||||||    
T  6951882 agcataactcagttgacagggacatgcattattatatgcagggg 6951839  T

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Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 19137622 - 19137665
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||    
T  19137622 agcatagctcagttggcaggaacatgcattgttatatgcagggg 19137665  T

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Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 31108852 - 31108809
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagggg 239  Q
    |||||| ||||||||||||||||||| || ||||||||||||||    
T  31108852 agcataactcagttggcagggacatgcataattatatgcagggg 31108809  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 12143497 - 12143455
Alignment:
Q  198 catagctcagttggcagggacatgtattattatatgcagggga 240  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  12143497 catagctcagttggcagggacatgcattgttatatgcatggga 12143455  T

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Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 24130562 - 24130608
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcaggggacg 242  Q
    |||||| ||||||||||||||||||  ||| ||||||||||||||||    
T  24130562 agcataactcagttggcagggacatacattgttatatgcaggggacg 24130608  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 30745823 - 30745785
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgc 234  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  30745823 agcatagctcagttggcagggacatgcattgttatatgc 30745785  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 51017796 - 51017834
Alignment:
Q  199 atagctcagttggcagggacatgtattattatatgcagg 237  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  51017796 atagctcagttggcagggacatgcattgttatatgcagg 51017834  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 51412082 - 51412041
Alignment:
Q  196 agcatagctcagttggcagggacatgtattattatatgcagg 237  Q
    ||||||| |||||||||||||||||| ||| |||||||||||    
T  51412082 agcatagttcagttggcagggacatgcattgttatatgcagg 51412041  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 3784072 - 3784116
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||    
T  3784072 agcatagctcagttggcagggacaatgcattattatatacagggg 3784116  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 36331819 - 36331775
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  36331819 agcatagctcaattggcagggacaatgcattattatatgcagggg 36331775  T

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Target: scaffold0809 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 4898 - 4854
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  4898 agcatagctcagttggcagggacaatgcattattatatgcagggg 4854  T

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Target: scaffold0070 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 12567 - 12611
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  12567 agcatagctcagttggcagggacaatgcattattatatgcagggg 12611  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 25028 - 25072
Alignment:
Q  196 agcatagctcagttggcagggac-atgtattattatatgcagggg 239  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    
T  25028 agcatagctcagttggcagggacaatgcattattatatgcagggg 25072  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 440405 - 440445
Alignment:
Q  199 atagctcagttggcagggacatgtattattatatgcagggg 239  Q
    ||||||||||||||||| ||||| ||||||||||| |||||    
T  440405 atagctcagttggcaggaacatgcattattatatgtagggg 440445  T

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