View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10114_low_19 (Length: 266)
Name: NF10114_low_19
Description: NF10114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10114_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 63 - 254
Target Start/End: Original strand, 6258179 - 6258370
Alignment:
| Q |
63 |
ttaagtttgaagagtctatgtggtagtgggtgaattggagcataaaatgtttatggtgtgtagttctagtagcagcacacaagtgctaatattgaactca |
162 |
Q |
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| T |
6258179 |
ttaagtttgaagagtctatgtggtggtgggtgaagtggagcataaaatgtttatggtgtgtagttctagtagcagcacacaagtgctaatattgaactca |
6258278 |
T |
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| Q |
163 |
gcttcacctttgacttctttgtcacatagaagaatccatgttccaaactcagttactaaggttgttggagttggaagaagaggtggaaaatg |
254 |
Q |
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| T |
6258279 |
gcttcacctttgacttctttgtcacatagaagaatctatgttccaaattcagttactaaggttgttggagttggaagaagaggtggaaaatg |
6258370 |
T |
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