View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10114_low_3 (Length: 634)
Name: NF10114_low_3
Description: NF10114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10114_low_3 |
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[»] scaffold0014 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 570; Significance: 0; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 18 - 624
Target Start/End: Complemental strand, 7806646 - 7806040
Alignment:
Q |
18 |
agatttaacgtgacaaattggctccaagaggcnnnnnnncctcatatagaggaaattcatctcactttgcctttccacaccttaaagcatgttattttcg |
117 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
7806646 |
agatttaacgtgacaaattggctccaagaggcaaaaaaacctcatatagaggaaattcatctcactttgcctttccacaccttaaagcatgttattttcg |
7806547 |
T |
 |
Q |
118 |
tctcgcaaacccttgttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaatctgacatc |
217 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
7806546 |
tctcgcaaactcttgttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaatctgacatc |
7806447 |
T |
 |
Q |
218 |
agtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtcctatcctagaagatttgcatgctgaacttatctattttatgagacatgat |
317 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
7806446 |
agtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtcctatcctagaagatttgcatgctgaacttatctattttatgagacatgat |
7806347 |
T |
 |
Q |
318 |
gaaaacaatgcagcagaagaagggcttaaacccttgacattgcctatgttggttagagtgagtatagggataatggatggtctgtttaatggtattaata |
417 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
T |
7806346 |
gaaaacaatgcagcagaagaagggcttaaacccttgacattgcctatgttggttagagtgagtatagggataatggatggtctgtttaatggtattaata |
7806247 |
T |
 |
Q |
418 |
atgtcaagtttctacgcatagtcatggaatgcacaggagcggtctctttgaaagccattccactctttccaaacttaatttccatcgaactactgtttcc |
517 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7806246 |
atgtcaagtttctacgcatagtcatggaatgcacaggagcgttctctttgaaagccattccactctttccaaacttaatttccatcgaactactgtttcc |
7806147 |
T |
 |
Q |
518 |
tagttattcatatatttgttggtatggtgtagtaaaactgctccgccattgtcctaagcttcaaattcttttcattaaaaaggtatttttgtttgcttgt |
617 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
7806146 |
tagttattcatatatttgttggtatggtgtagtaaaactgctccgccattgtcccaagcttcaaattcttttcattaaaaaggtatttttgtttgcttgt |
7806047 |
T |
 |
Q |
618 |
tcctttg |
624 |
Q |
|
|
|| |||| |
|
|
T |
7806046 |
tcttttg |
7806040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 148 - 359
Target Start/End: Original strand, 10415842 - 10416053
Alignment:
Q |
148 |
aaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaatctgacatcagtttcttttgaaaatcgggatgattacat |
247 |
Q |
|
|
||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |
|
|
T |
10415842 |
aaagtgtatatgttggaaaggatacttcatgtgttcatcttctgtcactcaaaaccctaagcttgatatcagtttcttttgaaaatcggaatgattacat |
10415941 |
T |
 |
Q |
248 |
aaattttctcaatgcttgtcctatcctagaagatttgcatgctgaacttatctattttatgagacatgatgaaaacaatgcagcagaagaagggcttaaa |
347 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | || | ||||||| | |||| | ||||||| |||||| |
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|
T |
10415942 |
aaattttcttcatgcttgtcctatcctagaagatttgcatgctgaatctatttattttattaaacttaatgaaaaaactgcatccaaagaaggtcttaaa |
10416041 |
T |
 |
Q |
348 |
cccttgacattg |
359 |
Q |
|
|
|||||||||||| |
|
|
T |
10416042 |
cccttgacattg |
10416053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 458 - 606
Target Start/End: Original strand, 10416150 - 10416298
Alignment:
Q |
458 |
ggtctctttgaaagccattccactctttccaaacttaatttccatcgaactactgtttcctagttattcatatatttgttggtatggtgtagtaaaactg |
557 |
Q |
|
|
||||||||||| ||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||| ||| | |
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|
T |
10416150 |
ggtctctttgagagccattcccctctttccaaacttaatttggattaaactattgtttcctagttattcatatatttgttgggatggtgtagttgaacgg |
10416249 |
T |
 |
Q |
558 |
ctccgccattgtcctaagcttcaaattcttttcattaaaaaggtatttt |
606 |
Q |
|
|
|||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
10416250 |
ctcctccattgtcccaagcttcaaattcttttcattaaaaaggtatttt |
10416298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 3255621 - 3255441
Alignment:
Q |
110 |
tattttcgtctcgcaaacccttgttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaat |
209 |
Q |
|
|
||||||| ||| |||||||||||||||||||||||| |||| ||| |||||||| ||| ||||| ||||| ||||||||||||| |||||||||| | |
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|
T |
3255621 |
tattttcatcttccaaacccttgttgttctcaaacttgaaaggttaaatgttggagcggacacttcttgtgttgatcttccatcactaaaaaccctaact |
3255522 |
T |
 |
Q |
210 |
ctgacatcagtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtcctatcctagaagatttgcatgct |
290 |
Q |
|
|
|| || |||| |||||||||| || ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
3255521 |
ttggaatatgtttattttgaaaattggaatgattatataaattttctctatgcttgtcctatcctagaagatttgcatgct |
3255441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 603
Target Start/End: Original strand, 7872036 - 7872106
Alignment:
Q |
533 |
ttgttggtatggtgtagtaaaactgctccgccattgtcctaagcttcaaattcttttcattaaaaaggtat |
603 |
Q |
|
|
||||||| ||||| ||| | || |||||||||||||||| ||||||||||||||| | ||||||||||||| |
|
|
T |
7872036 |
ttgttgggatggtataggagaattgctccgccattgtcccaagcttcaaattcttattattaaaaaggtat |
7872106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 118 - 291
Target Start/End: Original strand, 7814380 - 7814553
Alignment:
Q |
118 |
tctcgcaaacccttgttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaatctgacatc |
217 |
Q |
|
|
|||| |||||||||||||||||||||||| |||| | ||||||| |||||||| ||||| ||||||| || ||||||| ||| || | | | |
|
|
T |
7814380 |
tctctcaaacccttgttgttctcaaacttatggatttacacattggaaatgatacttcttgtgttgatcttccctcgctcaaaatcctgcatttaagtta |
7814479 |
T |
 |
Q |
218 |
agtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtcctatcctagaagatttgcatgctg |
291 |
Q |
|
|
|||| ||||||||||| | ||||||||||| |||||| ||||||||| | |||||||||||||||||||| |
|
|
T |
7814480 |
tgtttattttgaaaatcagaatgattacataggttttctttctgcttgtcccaacctagaagatttgcatgctg |
7814553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 331 - 437
Target Start/End: Complemental strand, 3255409 - 3255303
Alignment:
Q |
331 |
cagaagaagggcttaaacccttgacattgcctatgttggttagagtgagtat-agggataatggatggtctgtttaatggtattaataatgtcaagtttc |
429 |
Q |
|
|
||||||||||| ||||| ||||| | ||||||| |||||||||| ||||| || || | |||||| || ||||||||||||| |||||||| |||||| |
|
|
T |
3255409 |
cagaagaagggtttaaatccttggccttgcctaaattggttagagccagtattagtga-agtggatgctcagtttaatggtattgataatgtcgagtttc |
3255311 |
T |
 |
Q |
430 |
tacgcata |
437 |
Q |
|
|
|||||||| |
|
|
T |
3255310 |
tacgcata |
3255303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 601
Target Start/End: Complemental strand, 3255199 - 3255142
Alignment:
Q |
544 |
gtgtagtaaaactgctccgccattgtcctaagcttcaaattcttttcattaaaaaggt |
601 |
Q |
|
|
|||||||| |||| |||||||||| ||| || |||||||||||||| ||||||||||| |
|
|
T |
3255199 |
gtgtagtagaacttctccgccattctcccaatcttcaaattctttttattaaaaaggt |
3255142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 7871599 - 7871692
Alignment:
Q |
108 |
gttattttcgtctcgcaaacccttgttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaa |
201 |
Q |
|
|
||||||||| |||| |||||||||||||||||||||||| | || || || || || ||||||||| ||||||||||||||| ||||||| |
|
|
T |
7871599 |
gttattttcatctctcaaacccttgttgttctcaaacttaagaggatagatttttcaattgatacttcatgtgttcatcttccattgctcaaaa |
7871692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 601
Target Start/End: Original strand, 7814805 - 7814860
Alignment:
Q |
546 |
gtagtaaaactgctccgccattgtcctaagcttcaaattcttttcattaaaaaggt |
601 |
Q |
|
|
|||||| |||||||| |||||| ||| |||||||||||||||| ||||||||||| |
|
|
T |
7814805 |
gtagtacaactgctctgccattctcccaagcttcaaattctttcaattaaaaaggt |
7814860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 533 - 588
Target Start/End: Original strand, 7860716 - 7860771
Alignment:
Q |
533 |
ttgttggtatggtgtagtaaaactgctccgccattgtcctaagcttcaaattcttt |
588 |
Q |
|
|
||||||| |||||||| || |||| |||||||| ||||| |||||||||||||||| |
|
|
T |
7860716 |
ttgttgggatggtgtattacaactcctccgccactgtcccaagcttcaaattcttt |
7860771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 421
Target Start/End: Original strand, 7871814 - 7871921
Alignment:
Q |
314 |
tgatgaaaacaatgcagcagaagaagggcttaaacccttgacattgcctatgttggttagagtgagtatagggataatggatggtctgtttaatggtatt |
413 |
Q |
|
|
|||| |||||||| | |||||||||| ||||| | ||||||||| ||| ||||||||||| |||||| | |||||||| | |||||||||||||| |
|
|
T |
7871814 |
tgataaaaacaatataccagaagaaggttttaaatctttgacattgtctaagttggttagagcgagtattagttcaatggatgctttgtttaatggtatt |
7871913 |
T |
 |
Q |
414 |
aataatgt |
421 |
Q |
|
|
||||||| |
|
|
T |
7871914 |
gataatgt |
7871921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 7860354 - 7860476
Alignment:
Q |
168 |
gatacttcaagtgttcatcttccatcactcaaaaccctaaatctgacatcagtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtc |
267 |
Q |
|
|
|||||||| ||||| |||||||||| |||||||| | || ||| ||| ||| |||| ||||||| |||||||||| |||||||| |||||||| |
|
|
T |
7860354 |
gatacttcgtgtgttgatcttccatcgctcaaaacattgcatttgaaatccgttcattttacaaatcggaatgattacatcaattttctttctgcttgtc |
7860453 |
T |
 |
Q |
268 |
ctatcctagaagatttgcatgct |
290 |
Q |
|
|
|||| || |||||||| |||||| |
|
|
T |
7860454 |
ctattctggaagatttacatgct |
7860476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 601
Target Start/End: Complemental strand, 14435875 - 14435838
Alignment:
Q |
564 |
cattgtcctaagcttcaaattcttttcattaaaaaggt |
601 |
Q |
|
|
|||||||| | ||||||||||||||||||||||||||| |
|
|
T |
14435875 |
cattgtcccatgcttcaaattcttttcattaaaaaggt |
14435838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 59 - 611
Target Start/End: Complemental strand, 19317461 - 19316912
Alignment:
Q |
59 |
tcatatagaggaaattcatctcactttgcctttccacaccttaaagcatgttattttcgtctcgcaaacccttgttgttctcaaacttcaaagtttatat |
158 |
Q |
|
|
||||||||| ||||||||||||| |||||||| ||| ||||| | || | | |||| ||||| ||||||||||||||||| |||||| ||||||||||| |
|
|
T |
19317461 |
tcatatagaagaaattcatctcagtttgccttcccataccttgatgcccgatctttttgtctctcaaacccttgttgttctaaaacttgaaagtttatat |
19317362 |
T |
 |
Q |
159 |
gttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaatctgacatcagtttcttttgaaaatcgggatgattacataaattttctca |
258 |
Q |
|
|
|||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| || || ||||| |||||||||| |
|
|
T |
19317361 |
gttggaaagggtacttcgtgtgttcatcttccatcacttaaaaccctaaatctgacatcagtttattttcaaaattggaataattacgtaaattttcttt |
19317262 |
T |
 |
Q |
259 |
atgcttgtcctatcctagaagatttgcatgctgaacttatctattttatgagacatgatgaaaacaatgcagcagaagaagggcttaaacccttgacatt |
358 |
Q |
|
|
|||||||||||||| ||||||||||| |||| |||| ||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||||||| |
|
|
T |
19317261 |
atgcttgtcctatcttagaagatttgtatgcagaaccaatccattttataagatttgatgaaaacaatgcatcagaagaagggattaaatccttgacatt |
19317162 |
T |
 |
Q |
359 |
gcctatgttggttagagtgagtatagggataatggatggtctgtttaatggtattaataatgtcaagtttctacgcatagtcatggaatgcacaggagcg |
458 |
Q |
|
|
| ||| ||||||||||| ||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||| || |||| ||| || ||| |
|
|
T |
19317161 |
gtctaagttggttagagcgagtataaggataagggatggtgtggttaatggtattaataatgtcaagtttctacgcgtactcat---ttgcgcaaaagct |
19317065 |
T |
 |
Q |
459 |
gtctctttgaaagccattccactctttccaaacttaatttccatcgaactactgtttcctagttattcatatatttgttggtatggtgtagtaaaactgc |
558 |
Q |
|
|
|||||||||| ||||||||||||||| ||||||||||||||| ||| || |||||||||| | |||||||||||||||| ||| ||||||| |||||| |
|
|
T |
19317064 |
ttctctttgaatgccattccactctttgaaaacttaatttccatggaattagtgtttcctagatgttcatatatttgttgggatgatgtagtagaactgc |
19316965 |
T |
 |
Q |
559 |
tccgccattgtcctaagcttcaaattcttttcattaaaaaggtatttttgttt |
611 |
Q |
|
|
|||||||||| || |||||||| |||||||||||| ||||||||||||||||| |
|
|
T |
19316964 |
tccgccattgccccaagcttcagattcttttcattgaaaaggtatttttgttt |
19316912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 14017997 - 14018187
Alignment:
Q |
93 |
cacaccttaaagcatgttattttcgtctcgcaaacccttgttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccat |
192 |
Q |
|
|
|||||||| |||| ||| ||||| | || |||||| |||||||||||||||||||| | ||| || ||| |||||||||||| ||||| ||||||| | |
|
|
T |
14017997 |
cacaccttgaagcccgttgttttcatatcccaaacctttgttgttctcaaacttcaacggttagatattgaaaaggatacttcgtgtgttgatcttccgt |
14018096 |
T |
 |
Q |
193 |
cactcaaaaccctaaatctgacatcagtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtcctatcctagaagattt |
283 |
Q |
|
|
||||||||||||| ||| || || ||||||||||||||| || ||||||| ||||||||||| ||| ||||||||||||||||||||| |
|
|
T |
14018097 |
cactcaaaaccctgaatttggaatatgtttcttttgaaaattggaatgattatataaattttctttatggttgtcctatcctagaagattt |
14018187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 601
Target Start/End: Original strand, 14018452 - 14018517
Alignment:
Q |
536 |
ttggtatggtgtagtaaaactgctccgccattgtcctaagcttcaaattcttttcattaaaaaggt |
601 |
Q |
|
|
|||| ||||||| ||| ||||||||||||||| ||| | ||| ||||||||||| ||||||||||| |
|
|
T |
14018452 |
ttgggatggtgttgtagaactgctccgccattctccaaggctccaaattctttttattaaaaaggt |
14018517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 37997345 - 37997164
Alignment:
Q |
109 |
ttattttcgtctcgcaaacccttgttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaa |
208 |
Q |
|
|
|||||||| |||| |||||||||||||||||||||||| |||| ||| |||||||||| ||||||| ||||| |||||||||| || |||||||| | |
|
|
T |
37997345 |
ttattttcatctcccaaacccttgttgttctcaaacttaaaaggttaaatgttggaaatgatactttgtgtgttgatcttccatcgctgaaaacccttta |
37997246 |
T |
 |
Q |
209 |
tctgacatcagtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtcctatcctagaagatttgcatgct |
290 |
Q |
|
|
| || || ||| | |||| |||||| | | |||||||| |||||||| |||||||||||||| |||||||| |||||| |
|
|
T |
37997245 |
tttgcaattagtgtattttaaaaatcagaaggattacattaattttctttccgcttgtcctatccttgaagattttcatgct |
37997164 |
T |
 |
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Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 166598 - 166485
Alignment:
Q |
133 |
ttgttctcaaacttcaaagtttatatgttggaaaggatacttcaagtgttcatcttccatcactcaaaaccctaaatctgacatcagtttcttttgaaaa |
232 |
Q |
|
|
|||||||||||||| ||| |||||||||||| || ||||||| ||||| |||||||||||||| |||| || || | |||||||||| |||| ||| |
|
|
T |
166598 |
ttgttctcaaacttgaaaatttatatgttggtaatgatactttgtgtgttaatcttccatcactc--aaccttacatttaacatcagtttatttttaaag |
166501 |
T |
 |
Q |
233 |
tcgggatgattacata |
248 |
Q |
|
|
|| | ||||||||||| |
|
|
T |
166500 |
tcagaatgattacata |
166485 |
T |
 |
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Target: chr5 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 24112215 - 24112323
Alignment:
Q |
179 |
tgttcatcttccatcactcaaaaccctaaatctgacatcagtttcttttgaaaatcgggatgattacataaattttctcaatgcttgtcctatcctagaa |
278 |
Q |
|
|
|||| |||||||||| ||||||| |||| | ||| || |||| || |||||||| | |||||| ||| || |||| |||||||||||||| ||| || |
|
|
T |
24112215 |
tgttgatcttccatctctcaaaatcctaggtttgaaatatgtttgttgtgaaaatcagaatgatttcattaagcttcttaatgcttgtcctattctacaa |
24112314 |
T |
 |
Q |
279 |
gatttgcat |
287 |
Q |
|
|
||||||||| |
|
|
T |
24112315 |
gatttgcat |
24112323 |
T |
 |
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